Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

tig00000110

Orthogroup ID

OG0007604

Physical Location & Seq

Genomic Coordinates Reverse (-)

18101 .. 21070

Gene Structure 2970 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom110g00010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGCCACCAGTGCAGAATTTTGTGAGAGCGGAAATGCTGCCGAGCGGGTACCTAATTAGACCTTGTGAAGGTGGTGGCTCGATCCTTCACATTGTTGATCATATGGATTTAGAGGTATGCAGAGCAGTCTGGCTTTTGTATATTGAATGCTTAAACCAGCCTTGGAGTGTACCTGAAGTGTTGCGCCCGCTTTATGAGTCACCAACACTTCTTGCTCAGAAGACAACTATGACATCTTGTGTTGTAATGTGGACATATTTCTTCTTTCAGGCATTACGCAACCTTAGGCAGATATCTCAAGAAGTTTCTAAGCCTAATTCCGCCGGTTGGGGAAGAAGGCCTGCAGCTCTCCGTTGCAGGGGTTTCAACGAAGCAGTTAACGGGTTTACAGATGAGGGATGGTCTGTTCTAGAAAGTGATGGTGTCGATGATGTTACCCTTCTTGTGAACTCGTCTCCGGGCAAGATGATGAGTGCAAATCTTTATACCGATGGAGTTCCATCTATGAGCACTGCAGTCTTATGTGCCAAACCCCAGCTGTGTAGTGGAGTGGATGAGAATGCCGTTGGGACCTGCTCTGAACTAGTATTTGCTCCCATCGATACTCCCAGTCCAAACCGTACGCTTGATCTTGCCTCGGCTCTTGAAGTTGGACCCGCAGGAAGCAGAGCTTCTGGTGATAATGCTGGCCACTCTGGCAATACAAAGTCTGTAATGACAATAGCATTCCAGTTTGCATTTGAAATTCACCTCCAAGAAAATGTAGCCTCCATGGCTCGGCAGTATGTGCGCAGTATCATAGCATCAGTGCAGAGGGTGGCACTGGCGCTCTCCCCTTCTCGTTTTGGTTCTCATGCTGGTTTCCGGCCTCCACCTGGCACTCCCGAAGCACAAACACTTGCCGGTTGGATTTGTCAGAGCTATAGGTGCTTAATTAATCTTGATCTTTTCAGGTGCTATCTAGGTGGAGAACTACTAAAAACTGAAGGAAGCGAGTCCATTCTCAAATCCCTTTGGCATCACCCGGATGCAATCTTATGCTGCTCTTTGAAGGTAAATTCTACTTGCATGTTTATGCAGGCAATGCCAATTTTTACATTCGGAAACCAGGCAGCCCTGGACATGCTTGAGACGACGTTAATTGCACTTCAAGACATTATGCTGGAAAAGATTTTCGATGACAATGGAAGGAAGACACTCTGCTCCGAGTTCCCGCAGATAATGCAGCAGGTATACTACTTTGAAGTCCATCAAATACTGGGGGCTGCAGGGTTTATGTGTCTTCAAGGAGGAATATGTATGTCAAGCATGGGAAGGCCGATCTCGTACGAGAGAGCAGTAGCATGGAAGGTGCTGAATGAAGAAGAAACCGCTCACTGCATCTGCTTCATGTTCATCAACTGGTCATTTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0008284 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009889 GO:0009933 GO:0010014 GO:0010016 GO:0010033 GO:0010065 GO:0010067 GO:0010072 GO:0010087 GO:0010089 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042127 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045595 GO:0045597 GO:0048316 GO:0048367 GO:0048507 GO:0048508 GO:0048518 GO:0048522 GO:0048532 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090421 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox MEKHLA START

Protein Analysis

472

Amino Acids

51.96

Weight (kDa)

5.36

Isoelectric Point (pI)

47.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
START	PF01852	2 - 38	3.2e-09	START domain
MEKHLA	PF08670	299 - 470	3e-36	MEKHLA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007604)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32880
fragaria_vesca	FvH4_2g35360 FvH4_2g35360 FvH4_2g35360 FvH4_2g35360
malus_domestica	MD08G1112900.v1.1 MD15G1092200.v1.1
prunus_persica	Prupe.1G447100_v2.0.a1 Prupe.1G447100_v2.0.a1
pyrus_communis	pycom08g09360 pycom110g00010 pycom15g08570
rosa_chinensis	RchiOBHm_Chr6g0306551
rosa_laevigata	RLG00000010786
rosa_multiflora	Rmu_sc0002971.1_g000003 Rmu_sc0002971.1_g000004
rosa_roxburghii	Rroxscaffold_7G00161680
rosa_rugosa	Rorug06G0350500 Rorug06G0350500
rosa_samantha	Rh6AG462700 Rh6BG438100 Rh6CG476800 Rh6DG463500
rosa_wichuraiana	Rw6G040320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	791
Acc36I	ACCTGC	2 cut(s)	581, 1219
Acc65I	GGTACC	1 cut(s)	48
AccB1I	GGYRCC	1 cut(s)	48
AccBSI	CCGCTC	3 cut(s)	29, 45, 1373
AccI	GTMKAC	1 cut(s)	1233
AciI	CCGC	7 cut(s)	29, 45, 188, 321, 657, 1214, 1371
AclWI	GGATC	1 cut(s)	76
AcoI	YGGCCR	1 cut(s)	688
AcsI	RAATTY	3 cut(s)	16, 744, 1057
AcuI	CTGAAG	2 cut(s)	195, 1005
AfaI	GTAC	4 cut(s)	50, 171, 622, 1328
AfiI	CCNNNNNNNGG	5 cut(s)	68, 327, 358, 777, 875
AgsI	TTSAA	8 cut(s)	146, 367, 647, 743, 1051, 1151, 1244, 1286
AhlI	ACTAGT	1 cut(s)	583
AjnI	CCWGG	3 cut(s)	874, 1107, 1116
AloI	GAACNNNNNNTCC	2 cut(s)	390, 422
AluBI	AGCT	4 cut(s)	347, 538, 671, 921
AluI	AGCT	4 cut(s)	347, 538, 671, 921
Alw21I	GWGCWC	1 cut(s)	512
Alw26I	GTCTC	2 cut(s)	459, 1124
AlwI	GGATC	1 cut(s)	76
AoxI	GGCC	4 cut(s)	338, 688, 866, 1316
ApeKI	GCWGC	6 cut(s)	37, 344, 1041, 1112, 1225, 1265
ApoI	RAATTY	3 cut(s)	16, 744, 1057
AseI	ATTAAT	1 cut(s)	936
Asp718I	GGTACC	1 cut(s)	48
AspLEI	GCGC	3 cut(s)	186, 792, 829
AspS9I	GGNCC	2 cut(s)	570, 653
AsuC2I	CCSGG	2 cut(s)	459, 1025
AsuHPI	GGTGA	4 cut(s)	192, 689, 740, 1013
AvaII	GGWCC	2 cut(s)	570, 653
AxyI	CCTNAGG	1 cut(s)	284
BalI	TGGCCA	1 cut(s)	690
BanI	GGYRCC	1 cut(s)	48
BbsI	GAAGAC	3 cut(s)	227, 1199, 1274
Bbv12I	GWGCWC	1 cut(s)	512
BbvI	GCAGC	6 cut(s)	24, 356, 1028, 1124, 1237, 1252
BccI	CCATC	6 cut(s)	393, 413, 485, 508, 605, 1257
BceAI	ACGGC	1 cut(s)	548
BciT130I	CCWGG	3 cut(s)	876, 1109, 1118
BclI	TGATCA	1 cut(s)	97
BcnI	CCSGG	2 cut(s)	459, 1025
BcoDI	GTCTC	2 cut(s)	459, 1124
BcuI	ACTAGT	1 cut(s)	583
BfaI	CTAG	3 cut(s)	410, 584, 962
BfmI	CTRYAG	4 cut(s)	342, 513, 922, 1266
BfoI	RGCGCY	1 cut(s)	830
BfuAI	ACCTGC	2 cut(s)	581, 1219
BglI	GCCNNNNNGGC	2 cut(s)	696, 773
BisI	GCNGC	6 cut(s)	38, 345, 1042, 1113, 1226, 1266
BlsI	GCNGC	6 cut(s)	39, 346, 1043, 1114, 1227, 1267
Bme1390I	CCNGG	5 cut(s)	459, 876, 1025, 1109, 1118
Bme18I	GGWCC	2 cut(s)	570, 653
BmgT120I	GGNCC	2 cut(s)	570, 653
BmiI	GGNNCC	3 cut(s)	50, 571, 655
BmrFI	CCNGG	5 cut(s)	459, 876, 1025, 1109, 1118
BmrI	ACTGGG	2 cut(s)	603, 1268
BmsI	GCATC	4 cut(s)	812, 1018, 1027, 1389
BmuI	ACTGGG	2 cut(s)	603, 1268
BpiI	GAAGAC	3 cut(s)	227, 1199, 1274
BpuEI	CTTGAG	2 cut(s)	282, 1148
BpuMI	CCSGG	2 cut(s)	459, 1025
Bsa29I	ATCGAT	1 cut(s)	600
BsaJI	CCNNGG	4 cut(s)	161, 636, 771, 1116
Bsc4I	CCNNNNNNNGG	5 cut(s)	68, 327, 358, 777, 875
Bse118I	RCCGGY	2 cut(s)	323, 902
Bse1I	ACTGG	6 cut(s)	8, 609, 730, 828, 1263, 1406
Bse21I	CCTNAGG	1 cut(s)	284
Bse3DI	GCAATG	1 cut(s)	1089
BseBI	CCWGG	3 cut(s)	876, 1109, 1118
BseCI	ATCGAT	1 cut(s)	600
BseDI	CCNNGG	4 cut(s)	161, 636, 771, 1116
BseGI	GGATG	3 cut(s)	404, 559, 1033
BseLI	CCNNNNNNNGG	5 cut(s)	68, 327, 358, 777, 875
BseMI	GCAATG	1 cut(s)	1089
BseMII	CTCAG	1 cut(s)	230
BseNI	ACTGG	6 cut(s)	8, 609, 730, 828, 1263, 1406
BseXI	GCAGC	6 cut(s)	24, 356, 1028, 1124, 1237, 1252
BseYI	CCCAGC	1 cut(s)	534
BsgI	GTGCAG	2 cut(s)	32, 830
BshFI	GGCC	4 cut(s)	340, 690, 868, 1318
BshNI	GGYRCC	1 cut(s)	48
BshVI	ATCGAT	1 cut(s)	600
BsiHKAI	GWGCWC	1 cut(s)	512
BsiSI	CCGG	5 cut(s)	324, 458, 865, 903, 1025
BsiWI	CGTACG	2 cut(s)	620, 1326
BslFI	GGGAC	1 cut(s)	583
BslI	CCNNNNNNNGG	5 cut(s)	68, 327, 358, 777, 875
BsmAI	GTCTC	2 cut(s)	459, 1124
BsmBI	CGTCTC	2 cut(s)	459, 1124
BsmFI	GGGAC	1 cut(s)	583
BsmI	GAATGC	3 cut(s)	152, 565, 725
BsnI	GGCC	4 cut(s)	340, 690, 868, 1318
Bsp1286I	GDGCHC	1 cut(s)	512
Bsp143I	GATC	5 cut(s)	81, 97, 628, 943, 1320
Bsp19I	CCATGG	1 cut(s)	771
BspACI	CCGC	7 cut(s)	29, 45, 188, 321, 657, 1214, 1371
BspANI	GGCC	4 cut(s)	340, 690, 868, 1318
BspCNI	CTCAG	1 cut(s)	229
BspDI	ATCGAT	1 cut(s)	600
BspLI	GGNNCC	3 cut(s)	50, 571, 655
BspMAI	CTGCAG	3 cut(s)	346, 517, 1270
BspMI	ACCTGC	2 cut(s)	581, 1219
BspPI	GGATC	1 cut(s)	76
BspT107I	GGYRCC	1 cut(s)	48
BsrBI	CCGCTC	3 cut(s)	29, 45, 1373
BsrDI	GCAATG	1 cut(s)	1089
BsrFI	RCCGGY	2 cut(s)	323, 902
BsrI	ACTGG	6 cut(s)	8, 609, 730, 828, 1263, 1406
BssAI	RCCGGY	2 cut(s)	323, 902
BssECI	CCNNGG	4 cut(s)	161, 636, 771, 1116
BssMI	GATC	5 cut(s)	81, 97, 628, 943, 1320
BssNAI	GTATAC	1 cut(s)	1234
BssT1I	CCWWGG	2 cut(s)	161, 771
Bst1107I	GTATAC	1 cut(s)	1234
Bst2UI	CCWGG	3 cut(s)	876, 1109, 1118
Bst4CI	ACNGT	1 cut(s)	620
BstAPI	GCANNNNNTGC	3 cut(s)	787, 1084, 1222
BstC8I	GCNNGC	4 cut(s)	188, 342, 688, 1080
BstDEI	CTNAG	3 cut(s)	216, 284, 309
BstDSI	CCRYGG	1 cut(s)	771
BstENI	CCTNNNNNAGG	1 cut(s)	66
BstF5I	GGATG	3 cut(s)	404, 559, 1033
BstH2I	RGCGCY	1 cut(s)	830
BstHHI	GCGC	3 cut(s)	186, 792, 829
BstKTI	GATC	5 cut(s)	84, 100, 631, 946, 1323
BstMAI	GTCTC	2 cut(s)	459, 1124
BstMBI	GATC	5 cut(s)	81, 97, 628, 943, 1320
BstMWI	GCNNNNNNNGC	7 cut(s)	10, 696, 773, 787, 927, 1084, 1222
BstNI	CCWGG	3 cut(s)	876, 1109, 1118
BstNSI	RCATGY	2 cut(s)	1072, 1126
BstSCI	CCNGG	5 cut(s)	457, 874, 1023, 1107, 1116
BstSFI	CTRYAG	4 cut(s)	342, 513, 922, 1266
BstV1I	GCAGC	6 cut(s)	24, 356, 1028, 1124, 1237, 1252
BstV2I	GAAGAC	3 cut(s)	227, 1199, 1274
BstZ17I	GTATAC	1 cut(s)	1234
Bsu15I	ATCGAT	1 cut(s)	600
Bsu36I	CCTNAGG	1 cut(s)	284
BsuRI	GGCC	4 cut(s)	340, 690, 868, 1318
BsuTUI	ATCGAT	1 cut(s)	600
BtgI	CCRYGG	1 cut(s)	771
BtsCI	GGATG	3 cut(s)	404, 559, 1033
BtsI	GCAGTG	2 cut(s)	510, 1375
BtsIMutI	CAGTG	5 cut(s)	15, 510, 813, 821, 1375
BveI	ACCTGC	2 cut(s)	581, 1219
Cac8I	GCNNGC	4 cut(s)	188, 342, 688, 1080
CfoI	GCGC	3 cut(s)	186, 792, 829
Cfr10I	RCCGGY	2 cut(s)	323, 902
Cfr13I	GGNCC	2 cut(s)	570, 653
ClaI	ATCGAT	1 cut(s)	600
Csp6I	GTAC	4 cut(s)	49, 170, 621, 1327
CviAII	CATG	7 cut(s)	772, 854, 1069, 1123, 1309, 1344, 1390
CviQI	GTAC	4 cut(s)	49, 170, 621, 1327
DdeI	CTNAG	3 cut(s)	216, 284, 309
DpnI	GATC	5 cut(s)	83, 99, 630, 945, 1322
DpnII	GATC	5 cut(s)	81, 97, 628, 943, 1320
EaeI	YGGCCR	1 cut(s)	688
EciI	GGCGGA	1 cut(s)	310
Eco130I	CCWWGG	2 cut(s)	161, 771
Eco147I	AGGCCT	1 cut(s)	340
Eco32I	GATATC	1 cut(s)	294
Eco47I	GGWCC	2 cut(s)	570, 653
Eco57I	CTGAAG	2 cut(s)	195, 1005
Eco81I	CCTNAGG	1 cut(s)	284
EcoNI	CCTNNNNNAGG	1 cut(s)	66
EcoO109I	RGGNCCY	1 cut(s)	570
EcoRII	CCWGG	3 cut(s)	874, 1107, 1116
EcoRV	GATATC	1 cut(s)	294
EcoT14I	CCWWGG	2 cut(s)	161, 771
ErhI	CCWWGG	2 cut(s)	161, 771
Esp3I	CGTCTC	2 cut(s)	459, 1124
FaeI	CATG	7 cut(s)	775, 857, 1072, 1126, 1312, 1347, 1393
FalI	AAGNNNNNCTT	2 cut(s)	655, 687
FaqI	GGGAC	1 cut(s)	583
FatI	CATG	7 cut(s)	771, 853, 1068, 1122, 1308, 1343, 1389
FauI	CCCGC	4 cut(s)	38, 195, 664, 1221
FauNDI	CATATG	1 cut(s)	102
FbaI	TGATCA	1 cut(s)	97
FblI	GTMKAC	1 cut(s)	1233
Fnu4HI	GCNGC	6 cut(s)	38, 345, 1042, 1113, 1226, 1266
FokI	GGATG	3 cut(s)	411, 566, 1040
Fsp4HI	GCNGC	6 cut(s)	38, 345, 1042, 1113, 1226, 1266
FspBI	CTAG	3 cut(s)	410, 584, 962
FspI	TGCGCA	1 cut(s)	791
GlaI	GCGC	3 cut(s)	185, 791, 828
GluI	GCNGC	6 cut(s)	38, 345, 1042, 1113, 1226, 1266
GsaI	CCCAGC	1 cut(s)	538
HaeII	RGCGCY	1 cut(s)	830
HaeIII	GGCC	4 cut(s)	340, 690, 868, 1318
HapII	CCGG	5 cut(s)	324, 458, 865, 903, 1025
HhaI	GCGC	3 cut(s)	186, 792, 829
Hin1II	CATG	7 cut(s)	775, 857, 1072, 1126, 1312, 1347, 1393
Hin6I	GCGC	3 cut(s)	184, 790, 827
HinP1I	GCGC	3 cut(s)	184, 790, 827
HincII	GTYRAC	1 cut(s)	379
HindII	GTYRAC	1 cut(s)	379
HinfI	GANTC	2 cut(s)	197, 995
HpaI	GTTAAC	1 cut(s)	379
HpaII	CCGG	5 cut(s)	324, 458, 865, 903, 1025
HphI	GGTGA	4 cut(s)	192, 689, 740, 1013
Hpy166II	GTNNAC	6 cut(s)	170, 252, 379, 387, 448, 1234
Hpy188I	TCNGA	5 cut(s)	219, 580, 918, 1103, 1207
Hpy188III	TCNNGA	6 cut(s)	299, 410, 644, 884, 941, 1151
Hpy8I	GTNNAC	6 cut(s)	170, 252, 379, 387, 448, 1234
Hpy99I	CGWCG	1 cut(s)	1138
HpyCH4III	ACNGT	1 cut(s)	620
HpyCH4IV	ACGT	1 cut(s)	1136
HpyF10VI	GCNNNNNNNGC	7 cut(s)	10, 696, 773, 787, 927, 1084, 1222
HpyF3I	CTNAG	3 cut(s)	216, 284, 309
HpySE526I	ACGT	1 cut(s)	1136
Hsp92II	CATG	7 cut(s)	775, 857, 1072, 1126, 1312, 1347, 1393
HspAI	GCGC	3 cut(s)	184, 790, 827
KpnI	GGTACC	1 cut(s)	52
Ksp22I	TGATCA	1 cut(s)	97
KspAI	GTTAAC	1 cut(s)	379
Kzo9I	GATC	5 cut(s)	81, 97, 628, 943, 1320
LmnI	GCTCC	2 cut(s)	598, 1208
Lsp1109I	GCAGC	6 cut(s)	24, 356, 1028, 1124, 1237, 1252
LweI	GCATC	4 cut(s)	812, 1018, 1027, 1389
MaeI	CTAG	3 cut(s)	410, 584, 962
MaeII	ACGT	1 cut(s)	1136
MaeIII	GTNAC	2 cut(s)	198, 433
MalI	GATC	5 cut(s)	83, 99, 630, 945, 1322
MbiI	CCGCTC	3 cut(s)	29, 45, 1373
MboI	GATC	5 cut(s)	81, 97, 628, 943, 1320
MboII	GAAGA	7 cut(s)	232, 253, 345, 1204, 1274, 1373, 1376
MhlI	GDGCHC	1 cut(s)	512
MlsI	TGGCCA	1 cut(s)	690
MluCI	AATT	8 cut(s)	16, 54, 316, 744, 933, 1057, 1089, 1140
MluNI	TGGCCA	1 cut(s)	690
MlyI	GAGTC	2 cut(s)	206, 1004
MmeI	TCCRAC	2 cut(s)	631, 887
MnlI	CCTC	8 cut(s)	106, 388, 646, 761, 778, 807, 879, 1283
Mox20I	TGGCCA	1 cut(s)	690
MscI	TGGCCA	1 cut(s)	690
MseI	TTAA	6 cut(s)	152, 378, 932, 936, 1139, 1414
MslI	CAYNNNNRTG	2 cut(s)	1026, 1073
Msp20I	TGGCCA	1 cut(s)	690
MspA1I	CMGCKG	1 cut(s)	538
MspI	CCGG	5 cut(s)	324, 458, 865, 903, 1025
MspR9I	CCNGG	5 cut(s)	459, 876, 1025, 1109, 1118
Mva1269I	GAATGC	3 cut(s)	152, 565, 725
MvaI	CCWGG	3 cut(s)	876, 1109, 1118
MwoI	GCNNNNNNNGC	7 cut(s)	10, 696, 773, 787, 927, 1084, 1222
NciI	CCSGG	2 cut(s)	459, 1025
NcoI	CCATGG	1 cut(s)	771
NdeI	CATATG	1 cut(s)	102
NdeII	GATC	5 cut(s)	81, 97, 628, 943, 1320
NlaIII	CATG	7 cut(s)	775, 857, 1072, 1126, 1312, 1347, 1393
NlaIV	GGNNCC	3 cut(s)	50, 571, 655
NmeAIII	GCCGAG	3 cut(s)	66, 617, 757
NmuCI	GTSAC	1 cut(s)	198
NsbI	TGCGCA	1 cut(s)	791
NspI	RCATGY	2 cut(s)	1072, 1126
PacI	TTAATTAA	1 cut(s)	936
PceI	AGGCCT	1 cut(s)	340
PctI	GAATGC	3 cut(s)	152, 565, 725
Pfl23II	CGTACG	2 cut(s)	620, 1326
PkrI	GCNGC	6 cut(s)	39, 346, 1043, 1114, 1227, 1267
PleI	GAGTC	2 cut(s)	205, 1003
PpsI	GAGTC	2 cut(s)	205, 1003
PpuMI	RGGWCCY	1 cut(s)	570
PshBI	ATTAAT	1 cut(s)	936
Psp5II	RGGWCCY	1 cut(s)	570
Psp6I	CCWGG	3 cut(s)	874, 1107, 1116
PspFI	CCCAGC	1 cut(s)	534
PspGI	CCWGG	3 cut(s)	874, 1107, 1116
PspLI	CGTACG	2 cut(s)	620, 1326
PspN4I	GGNNCC	3 cut(s)	50, 571, 655
PspPI	GGNCC	2 cut(s)	570, 653
PspPPI	RGGWCCY	1 cut(s)	570
PstI	CTGCAG	3 cut(s)	346, 517, 1270
PvuII	CAGCTG	1 cut(s)	538
RsaI	GTAC	4 cut(s)	50, 171, 622, 1328
RsaNI	GTAC	4 cut(s)	49, 170, 621, 1327
RseI	CAYNNNNRTG	2 cut(s)	1026, 1073
SaqAI	TTAA	6 cut(s)	152, 378, 932, 936, 1139, 1414
SatI	GCNGC	6 cut(s)	38, 345, 1042, 1113, 1226, 1266
Sau3AI	GATC	5 cut(s)	81, 97, 628, 943, 1320
Sau96I	GGNCC	2 cut(s)	570, 653
SchI	GAGTC	2 cut(s)	206, 1004
ScrFI	CCNGG	5 cut(s)	459, 876, 1025, 1109, 1118
SduI	GDGCHC	1 cut(s)	512
SfaNI	GCATC	4 cut(s)	812, 1018, 1027, 1389
SfcI	CTRYAG	4 cut(s)	342, 513, 922, 1266
SinI	GGWCC	2 cut(s)	570, 653
SmiMI	CAYNNNNRTG	2 cut(s)	1026, 1073
SmlI	CTYRAG	2 cut(s)	297, 1127
SmoI	CTYRAG	2 cut(s)	297, 1127
SpeI	ACTAGT	1 cut(s)	583
Sse9I	AATT	8 cut(s)	16, 54, 316, 744, 933, 1057, 1089, 1140
SseBI	AGGCCT	1 cut(s)	340
SsiI	CCGC	7 cut(s)	29, 45, 188, 321, 657, 1214, 1371
SspMI	CTAG	3 cut(s)	410, 584, 962
StuI	AGGCCT	1 cut(s)	340
StyD4I	CCNGG	5 cut(s)	457, 874, 1023, 1107, 1116
StyI	CCWWGG	2 cut(s)	161, 771
TaaI	ACNGT	1 cut(s)	620
TaiI	ACGT	1 cut(s)	1139
TaqI	TCGA	4 cut(s)	80, 426, 600, 1176
TasI	AATT	8 cut(s)	16, 54, 316, 744, 933, 1057, 1089, 1140
Tru1I	TTAA	6 cut(s)	152, 378, 932, 936, 1139, 1414
Tru9I	TTAA	6 cut(s)	152, 378, 932, 936, 1139, 1414
TscAI	CASTG	5 cut(s)	15, 517, 813, 828, 1382
TseFI	GTSAC	1 cut(s)	198
TseI	GCWGC	6 cut(s)	37, 344, 1041, 1112, 1225, 1265
Tsp45I	GTSAC	1 cut(s)	198
TspDTI	ATGAA	3 cut(s)	1374, 1378, 1384
TspGWI	ACGGA	1 cut(s)	341
TspRI	CASTG	5 cut(s)	15, 517, 813, 828, 1382
VpaK11BI	GGWCC	2 cut(s)	570, 653
VspI	ATTAAT	1 cut(s)	936
XagI	CCTNNNNNAGG	1 cut(s)	66
XapI	RAATTY	3 cut(s)	16, 744, 1057
XbaI	TCTAGA	1 cut(s)	409
XceI	RCATGY	2 cut(s)	1072, 1126
XcmI	CCANNNNNNNNNTGG	1 cut(s)	542
XmiI	GTMKAC	1 cut(s)	1233
XspI	CTAG	3 cut(s)	410, 584, 962

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.