Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0015152

Physical Location & Seq

Genomic Coordinates Forward (+)

15881245 .. 15885518

Gene Structure 4274 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G32910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGCCGGGTATGTCTTCGGAATCTGGCGGTGGAGAATTGGTTCTGTTTTCGACCAAGGAAAAAACTCCGGTGTTGTATCCTCTAAGCTATGGCCTCAAGTCTCCGGTTCACAGGCTCTCCATCTCCTGGGGTTGCGGAAACAACCTACGCGTCACGGTTTTAAGGAATCCAGAGTTACGCGATGATGACGACGGAGAAGTTGGTGGTAAGGTCGTAAACGTTAGGCTTAGCGGCGAGGATGGCGAAATCAGTGACCCACAGTGGCGAAGGATCGCTTATGGATCGGTATCTCCGTTCGCGCTTTTGCAGAGCAGAAGAAACTCAATTTCCAGTTTGTCTAAGATGGATATGAGTTCCTCTCTGTATCAGACTGCGTGGTGGGAGTACGTAATGGAATACAGCAGAGATATTAAATCTCTCCTTAGTAATACAATATCTTTGCCCGCTCCTTTGATTGAAGACCCGAGATCAGTTATAAAGAATGCTGAGGAACCAACTTCTTTAAAGGCTGCGTGGGAGTTGATGGAATTATTTTATGCAGATAAGACATGTCTGTCTTGGTTGCCAGAACGGCTCGTTGATTGGTTATCTGAATACGATATACTCCTTTCTAGCTCACATCCAACAATCTACTCAAAGCTCCAGGATTTCCAAAAGGAACTTGTTGGCCTGCAGGCCATCGAGGATGATCCAAGATACTGGGAAGTGATGGCTTCTGCTTTATCAGTTGGTTGGCTAGAAATAGTGGTGAAGTTGTTACACCTACATGGTTCTTATCAACTAGACCAGCTGGGACATCGTGAGACAGAAAATGGTTTGGTAGAAGCGGTTGCTGTTCTCATTTCAAAAATGCCACGAATGCGGCCACAACTAGAAGATGGGAAATTTGGTGAATGCTCTGCAGCAAAGCCTGACTTTATGAAGACACGAGAAAGATGGCAGTCTCAGATAACTAAACTAGAGTGCAGTGCCTTCTGGGTTCAATGTGCTCACCATCAGACCCGTGAGGGCTTGAGAAATATGTTGAAGATCATGATAGGAAATGCTGATTGCCTCAGAGCTGCGACATGTAACTGGATGGAGCTTTTTGTTTCACATCTTCTTTATCTCAGGCCATTTACGAAGGGATTAGATGGCATGCATAGCCTAGCCCAGAAGTGTGTTCAGTCAAAGCCAGTTAACACTTCCCATAAGCTTCTAAGACTGCTTATTGGAATTCTTGGAGAAAATACTGAGGTTGTTCTGGCAGAGTGTTCCAAAGAATTTGGCTCCTGGATGGTTGCACATGCCATGGAATTATTGACAGCTGGAAGCGAAGAAGGAGAAGTTCTTGTACATGAGGAACAGCGTAAGTTGGGTGGAATTAACATGGAAGAGCTCCATAGACTTGTTTATGCTCAAGTTCTTTCTTCTCATGCTTTGACTTGGCAGATAGCTCCTATTTATCTAGCATCGTGCGAGAAACAGGGATTAGGCTTATTAGAGCTGTTGTTCTACAGGCAGCCTGTTCAAGAGAATCAGATGCTTATTAAGAGCCTAGAGATTTGCCGTCTCTATGAACTCAGTAATGTCAGTGCTAAACTAATGAAGATTTCTGGAGTGCATCATTGGAAACATGGGAGGAAAGGCTCAGGGATTTTCTGGCTCCAGCAAGCTCGGGACGAAAATTGTCTCAGCGTGATTGCTCAACAGCTGTTTGATTCTGTTGGAAAATCATTGTCTGATGAAAGTCTCAAGCAATGGGAAGGCCTAGTCGAGTTGCTGGGTTCGGAATCACAGATCTCTGGTGGTCTCGATTTTCTTCACAAGTATAGAGATTTCAAGAGATCGCTGAAGGTAGTCCATGATGGAAAAACTATAGATGCAGCTCATGAAGCCGTAGAGAGACTTGTATCGCTAATGAAGAGCCCTTCTACTCCTCAACGCTTCTGGCTTCCTCTTCTGCATGATTCATTGAAGCTGTTGAATTGGCCCGAACGTTCGCTGTTGAATGTAACACAGACCAACCTGATGTTGAACAAATTACAAGAGCTATCAATAGCAAGGTTAAGACCAGGCTTCATAGAATCTGAGTTGTCTGCTCAAGCTGTGGGTTCAGTGAGACTTGCTCTAGCAACAAATCTCGGACGTGCTTTTCTCGAAGAATGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0006355 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0009891 GO:0009893 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0031080 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031503 GO:0031967 GO:0031975 GO:0032991 GO:0033036 GO:0033365 GO:0033993 GO:0034504 GO:0034613 GO:0042221 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0045893 GO:0045935 GO:0046907 GO:0048518 GO:0048522 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051641 GO:0051649 GO:0060255 GO:0065007 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0072594 GO:0080090 GO:0097305 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Nucleopor_Nup85

Protein Analysis

716

Amino Acids

80.85

Weight (kDa)

6.13

Isoelectric Point (pI)

47.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nucleopor_Nup85	PF07575	77 - 677	6.6e-145	Nup85 Nucleoporin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015152)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32910
fragaria_vesca	FvH4_2g35520
malus_domestica	MD15G1093200.v1.1
prunus_persica	Prupe.1G448000_v2.0.a1
pyrus_communis	pycom15g08600
rosa_chinensis	RchiOBHm_Chr6g0306261
rosa_laevigata	RLG00000010809
rosa_multiflora	Rmu_sc0017002.1_g000002 Rmu_sc0037804.1_g000002
rosa_roxburghii	Rroxscaffold_7G00161900
rosa_rugosa	Rorug06G0348400
rosa_samantha	Rh6AG460900 Rh6BG440100 Rh6CG475200 Rh6DG461500
rosa_wichuraiana	Rw6G040160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	476
AasI	GACNNNNNNGTC	1 cut(s)	553
AccB7I	CCANNNNNTGG	1 cut(s)	126
AccBSI	CCGCTC	1 cut(s)	446
AccII	CGCG	3 cut(s)	150, 180, 299
AciI	CCGC	6 cut(s)	27, 135, 231, 444, 827, 862
AclI	AACGTT	2 cut(s)	219, 1978
AclWI	GGATC	3 cut(s)	278, 289, 683
AcoI	YGGCCR	1 cut(s)	863
AcsI	RAATTY	3 cut(s)	884, 1215, 1262
AcuI	CTGAAG	1 cut(s)	1853
AfaI	GTAC	2 cut(s)	386, 1335
AfiI	CCNNNNNNNGG	1 cut(s)	126
AflIII	ACRYGT	3 cut(s)	148, 548, 1067
AjiI	CACGTC	1 cut(s)	2129
AjnI	CCWGG	4 cut(s)	125, 642, 1271, 2053
AloI	GAACNNNNNNTCC	2 cut(s)	24, 56
Alw21I	GWGCWC	2 cut(s)	991, 1380
Alw26I	GTCTC	9 cut(s)	105, 797, 948, 1556, 1676, 1736, 1796, 1879, 2095
AlwI	GGATC	3 cut(s)	278, 289, 683
Ama87I	CYCGRG	2 cut(s)	463, 1656
AoxI	GGCC	7 cut(s)	91, 667, 675, 863, 1112, 1747, 1970
ApeKI	GCWGC	5 cut(s)	509, 902, 1061, 1501, 1865
ApoI	RAATTY	3 cut(s)	884, 1215, 1262
Asp700I	GAANNNNTTC	1 cut(s)	39
AspLEI	GCGC	1 cut(s)	301
AspS9I	GGNCC	1 cut(s)	1971
AsuC2I	CCSGG	1 cut(s)	6
AsuHPI	GGTGA	3 cut(s)	760, 902, 983
AvaI	CYCGRG	2 cut(s)	463, 1656
BanII	GRGCYC	2 cut(s)	1380, 1910
BarI	GAAGNNNNNNTAC	2 cut(s)	1317, 1349
BauI	CACGAG	1 cut(s)	927
BbsI	GAAGAC	3 cut(s)	6, 465, 929
Bbv12I	GWGCWC	2 cut(s)	991, 1380
BbvCI	CCTCAGC	1 cut(s)	486
BbvI	GCAGC	5 cut(s)	496, 914, 1048, 1513, 1877
BceAI	ACGGC	3 cut(s)	587, 1533, 1862
BciT130I	CCWGG	4 cut(s)	127, 644, 1273, 2055
BciVI	GTATCC	1 cut(s)	87
BcnI	CCSGG	1 cut(s)	6
BcoDI	GTCTC	9 cut(s)	105, 797, 948, 1556, 1676, 1736, 1796, 1879, 2095
BfmI	CTRYAG	4 cut(s)	671, 900, 1495, 1857
BfuI	GTATCC	1 cut(s)	87
BglI	GCCNNNNNGGC	1 cut(s)	571
BglII	AGATCT	1 cut(s)	1779
BisI	GCNGC	7 cut(s)	232, 510, 863, 903, 1062, 1502, 1866
BlpI	GCTNAGC	1 cut(s)	227
BlsI	GCNGC	7 cut(s)	233, 511, 864, 904, 1063, 1503, 1867
Bme1390I	CCNGG	5 cut(s)	6, 127, 644, 1273, 2055
BmeT110I	CYCGRG	2 cut(s)	463, 1656
BmgBI	CACGTC	1 cut(s)	2129
BmgT120I	GGNCC	1 cut(s)	1971
BmiI	GGNNCC	3 cut(s)	492, 1270, 1646
BmrFI	CCNGG	5 cut(s)	6, 127, 644, 1273, 2055
BmrI	ACTGGG	1 cut(s)	709
BmsI	GCATC	4 cut(s)	1460, 1512, 1612, 1852
BmuI	ACTGGG	1 cut(s)	709
BpiI	GAAGAC	3 cut(s)	6, 465, 929
BplI	GAGNNNNNCTC	4 cut(s)	343, 375, 2092, 2124
BpmI	CTGGAG	3 cut(s)	626, 1617, 1631
Bpu10I	CCTNAGC	2 cut(s)	486, 1630
Bpu1102I	GCTNAGC	1 cut(s)	227
BpuEI	CTTGAG	5 cut(s)	80, 1033, 1383, 1718, 2067
BpuMI	CCSGG	1 cut(s)	6
BsaAI	YACGTR	1 cut(s)	388
BsaBI	GATNNNNATC	1 cut(s)	286
BsaI	GGTCTC	1 cut(s)	1796
BsaJI	CCNNGG	3 cut(s)	54, 126, 1290
BsaWI	WCCGGW	2 cut(s)	67, 103
BsaXI	ACNNNNNCTCC	4 cut(s)	24, 54, 101, 131
Bsc4I	CCNNNNNNNGG	1 cut(s)	126
Bse1I	ACTGG	4 cut(s)	330, 704, 1079, 1175
Bse3DI	GCAATG	1 cut(s)	1745
Bse8I	GATNNNNATC	1 cut(s)	286
BseBI	CCWGG	4 cut(s)	127, 644, 1273, 2055
BseDI	CCNNGG	3 cut(s)	54, 126, 1290
BseGI	GGATG	5 cut(s)	244, 619, 691, 1083, 1281
BseJI	GATNNNNATC	1 cut(s)	286
BseLI	CCNNNNNNNGG	1 cut(s)	126
BseMI	GCAATG	1 cut(s)	1745
BseMII	CTCAG	9 cut(s)	477, 959, 1069, 1123, 1224, 1576, 1644, 1687, 2061
BseNI	ACTGG	4 cut(s)	330, 704, 1079, 1175
BseRI	GAGGAG	1 cut(s)	1908
BseXI	GCAGC	5 cut(s)	496, 914, 1048, 1513, 1877
BseYI	CCCAGC	2 cut(s)	790, 1762
BsgI	GTGCAG	1 cut(s)	985
Bsh1236I	CGCG	3 cut(s)	150, 180, 299
BshFI	GGCC	7 cut(s)	93, 669, 677, 865, 1114, 1749, 1972
BsiHKAI	GWGCWC	2 cut(s)	991, 1380
BsiHKCI	CYCGRG	2 cut(s)	463, 1656
BsiSI	CCGG	3 cut(s)	5, 68, 104
BslFI	GGGAC	2 cut(s)	807, 1673
BslI	CCNNNNNNNGG	1 cut(s)	126
BsmAI	GTCTC	9 cut(s)	105, 797, 948, 1556, 1676, 1736, 1796, 1879, 2095
BsmBI	CGTCTC	1 cut(s)	1556
BsmFI	GGGAC	2 cut(s)	807, 1673
BsmI	GAATGC	3 cut(s)	487, 864, 899
BsnI	GGCC	7 cut(s)	93, 669, 677, 865, 1114, 1749, 1972
Bso31I	GGTCTC	1 cut(s)	1796
BsoBI	CYCGRG	2 cut(s)	463, 1656
Bsp1286I	GDGCHC	3 cut(s)	991, 1380, 1910
Bsp1407I	TGTACA	1 cut(s)	1333
Bsp143I	GATC	7 cut(s)	270, 281, 467, 688, 1029, 1779, 1826
Bsp1720I	GCTNAGC	1 cut(s)	227
Bsp19I	CCATGG	1 cut(s)	1290
BspACI	CCGC	6 cut(s)	27, 135, 231, 444, 827, 862
BspANI	GGCC	7 cut(s)	93, 669, 677, 865, 1114, 1749, 1972
BspCNI	CTCAG	9 cut(s)	478, 958, 1068, 1122, 1225, 1575, 1643, 1686, 2062
BspFNI	CGCG	3 cut(s)	150, 180, 299
BspHI	TCATGA	2 cut(s)	1032, 1870
BspLI	GGNNCC	3 cut(s)	492, 1270, 1646
BspMAI	CTGCAG	2 cut(s)	675, 904
BspPI	GGATC	3 cut(s)	278, 289, 683
BspQI	GCTCTTC	2 cut(s)	1368, 1898
BspTNI	GGTCTC	1 cut(s)	1796
BsrBI	CCGCTC	1 cut(s)	446
BsrDI	GCAATG	1 cut(s)	1745
BsrGI	TGTACA	1 cut(s)	1333
BsrI	ACTGG	4 cut(s)	330, 704, 1079, 1175
BssECI	CCNNGG	3 cut(s)	54, 126, 1290
BssMI	GATC	7 cut(s)	270, 281, 467, 688, 1029, 1779, 1826
BssSI	CACGAG	1 cut(s)	927
BssT1I	CCWWGG	2 cut(s)	54, 1290
Bst2BI	CACGAG	1 cut(s)	927
Bst2UI	CCWGG	4 cut(s)	127, 644, 1273, 2055
Bst4CI	ACNGT	2 cut(s)	157, 261
Bst6I	CTCTTC	3 cut(s)	1368, 1898, 1944
BstAUI	TGTACA	1 cut(s)	1333
BstBAI	YACGTR	1 cut(s)	388
BstC8I	GCNNGC	5 cut(s)	444, 671, 675, 1139, 1653
BstDSI	CCRYGG	1 cut(s)	1290
BstF5I	GGATG	5 cut(s)	244, 619, 691, 1083, 1281
BstFNI	CGCG	3 cut(s)	150, 180, 299
BstHHI	GCGC	1 cut(s)	301
BstKTI	GATC	7 cut(s)	273, 284, 470, 691, 1032, 1782, 1829
BstMAI	GTCTC	9 cut(s)	105, 797, 948, 1556, 1676, 1736, 1796, 1879, 2095
BstMBI	GATC	7 cut(s)	270, 281, 467, 688, 1029, 1779, 1826
BstMWI	GCNNNNNNNGC	5 cut(s)	240, 571, 859, 1143, 1874
BstNI	CCWGG	4 cut(s)	127, 644, 1273, 2055
BstNSI	RCATGY	4 cut(s)	552, 1071, 1141, 1289
BstSCI	CCNGG	5 cut(s)	4, 125, 642, 1271, 2053
BstSFI	CTRYAG	4 cut(s)	671, 900, 1495, 1857
BstSNI	TACGTA	1 cut(s)	388
BstUI	CGCG	3 cut(s)	150, 180, 299
BstV1I	GCAGC	5 cut(s)	496, 914, 1048, 1513, 1877
BstV2I	GAAGAC	3 cut(s)	6, 465, 929
BstX2I	RGATCY	1 cut(s)	1779
BstXI	CCANNNNNNTGG	1 cut(s)	699
BstYI	RGATCY	1 cut(s)	1779
BsuI	GTATCC	1 cut(s)	87
BsuRI	GGCC	7 cut(s)	93, 669, 677, 865, 1114, 1749, 1972
BtgI	CCRYGG	1 cut(s)	1290
BtgZI	GCGATG	1 cut(s)	195
BtrI	CACGTC	1 cut(s)	2129
BtsCI	GGATG	5 cut(s)	244, 619, 691, 1083, 1281
BtsI	GCAGTG	1 cut(s)	973
BtsIMutI	CAGTG	5 cut(s)	256, 266, 973, 1579, 2103
Cac8I	GCNNGC	5 cut(s)	444, 671, 675, 1139, 1653
CciI	TCATGA	2 cut(s)	1032, 1870
CfoI	GCGC	1 cut(s)	301
Cfr13I	GGNCC	1 cut(s)	1971
CseI	GACGC	1 cut(s)	139
Csp6I	GTAC	2 cut(s)	385, 1334
CviQI	GTAC	2 cut(s)	385, 1334
DpnI	GATC	7 cut(s)	272, 283, 469, 690, 1031, 1781, 1828
DpnII	GATC	7 cut(s)	270, 281, 467, 688, 1029, 1779, 1826
DraI	TTTAAA	1 cut(s)	504
DrdI	GACNNNNNNGTC	1 cut(s)	553
DseDI	GACNNNNNNGTC	1 cut(s)	553
EaeI	YGGCCR	1 cut(s)	863
Eam1104I	CTCTTC	3 cut(s)	1368, 1898, 1944
EarI	CTCTTC	3 cut(s)	1368, 1898, 1944
Ecl136II	GAGCTC	1 cut(s)	1378
Eco105I	TACGTA	1 cut(s)	388
Eco130I	CCWWGG	2 cut(s)	54, 1290
Eco147I	AGGCCT	1 cut(s)	1749
Eco24I	GRGCYC	2 cut(s)	1380, 1910
Eco31I	GGTCTC	1 cut(s)	1796
Eco53kI	GAGCTC	1 cut(s)	1378
Eco57I	CTGAAG	1 cut(s)	1853
Eco88I	CYCGRG	2 cut(s)	463, 1656
EcoICRI	GAGCTC	1 cut(s)	1378
EcoRI	GAATTC	1 cut(s)	1215
EcoRII	CCWGG	4 cut(s)	125, 642, 1271, 2053
EcoT14I	CCWWGG	2 cut(s)	54, 1290
EcoT22I	ATGCAT	1 cut(s)	1143
EcoT38I	GRGCYC	2 cut(s)	1380, 1910
ErhI	CCWWGG	2 cut(s)	54, 1290
Esp3I	CGTCTC	1 cut(s)	1556
FalI	AAGNNNNNCTT	4 cut(s)	259, 291, 899, 931
FaqI	GGGAC	2 cut(s)	807, 1673
FauI	CCCGC	1 cut(s)	451
Fnu4HI	GCNGC	7 cut(s)	232, 510, 863, 903, 1062, 1502, 1866
FokI	GGATG	5 cut(s)	251, 606, 698, 1090, 1288
FriOI	GRGCYC	2 cut(s)	1380, 1910
Fsp4HI	GCNGC	7 cut(s)	232, 510, 863, 903, 1062, 1502, 1866
GlaI	GCGC	1 cut(s)	300
GluI	GCNGC	7 cut(s)	232, 510, 863, 903, 1062, 1502, 1866
GsaI	CCCAGC	2 cut(s)	794, 1766
GsuI	CTGGAG	3 cut(s)	626, 1617, 1631
HaeIII	GGCC	7 cut(s)	93, 669, 677, 865, 1114, 1749, 1972
HapII	CCGG	3 cut(s)	5, 68, 104
HgaI	GACGC	1 cut(s)	139
HhaI	GCGC	1 cut(s)	301
Hin6I	GCGC	1 cut(s)	299
HinP1I	GCGC	1 cut(s)	299
HincII	GTYRAC	1 cut(s)	1180
HindII	GTYRAC	1 cut(s)	1180
HindIII	AAGCTT	1 cut(s)	1193
HinfI	GANTC	7 cut(s)	20, 166, 1516, 1700, 1772, 1949, 2066
HpaI	GTTAAC	1 cut(s)	1180
HpaII	CCGG	3 cut(s)	5, 68, 104
HphI	GGTGA	3 cut(s)	760, 902, 983
Hpy166II	GTNNAC	3 cut(s)	109, 217, 1180
Hpy8I	GTNNAC	3 cut(s)	109, 217, 1180
Hpy99I	CGWCG	1 cut(s)	194
HpyAV	CCTTC	7 cut(s)	261, 982, 1117, 1313, 1739, 1828, 1920
HpyCH4III	ACNGT	2 cut(s)	157, 261
HpyCH4IV	ACGT	4 cut(s)	219, 387, 1978, 2128
HpyF10VI	GCNNNNNNNGC	5 cut(s)	240, 571, 859, 1143, 1874
HpySE526I	ACGT	4 cut(s)	219, 387, 1978, 2128
HspAI	GCGC	1 cut(s)	299
KspAI	GTTAAC	1 cut(s)	1180
Kzo9I	GATC	7 cut(s)	270, 281, 467, 688, 1029, 1779, 1826
LguI	GCTCTTC	2 cut(s)	1368, 1898
LmnI	GCTCC	7 cut(s)	451, 645, 1081, 1274, 1383, 1441, 1650
Lsp1109I	GCAGC	5 cut(s)	496, 914, 1048, 1513, 1877
LweI	GCATC	4 cut(s)	1460, 1512, 1612, 1852
MaeII	ACGT	4 cut(s)	219, 387, 1978, 2128
MaeIII	GTNAC	6 cut(s)	151, 174, 251, 756, 1070, 1993
MalI	GATC	7 cut(s)	272, 283, 469, 690, 1031, 1781, 1828
MbiI	CCGCTC	1 cut(s)	446
MboI	GATC	7 cut(s)	270, 281, 467, 688, 1029, 1779, 1826
MflI	RGATCY	1 cut(s)	1779
MhlI	GDGCHC	3 cut(s)	991, 1380, 1910
MluI	ACGCGT	1 cut(s)	148
MmeI	TCCRAC	2 cut(s)	647, 1687
Mph1103I	ATGCAT	1 cut(s)	1143
MroXI	GAANNNNTTC	1 cut(s)	39
MseI	TTAA	7 cut(s)	161, 411, 503, 1179, 1365, 1530, 2048
MslI	CAYNNNNRTG	1 cut(s)	765
MspA1I	CMGCKG	3 cut(s)	790, 1307, 1693
MspI	CCGG	3 cut(s)	5, 68, 104
MspR9I	CCNGG	5 cut(s)	6, 127, 644, 1273, 2055
Mva1269I	GAATGC	3 cut(s)	487, 864, 899
MvaI	CCWGG	4 cut(s)	127, 644, 1273, 2055
MvnI	CGCG	3 cut(s)	150, 180, 299
MwoI	GCNNNNNNNGC	5 cut(s)	240, 571, 859, 1143, 1874
NciI	CCSGG	1 cut(s)	6
NcoI	CCATGG	1 cut(s)	1290
NdeII	GATC	7 cut(s)	270, 281, 467, 688, 1029, 1779, 1826
NlaIV	GGNNCC	3 cut(s)	492, 1270, 1646
NmuCI	GTSAC	2 cut(s)	151, 251
NsiI	ATGCAT	1 cut(s)	1143
NspI	RCATGY	4 cut(s)	552, 1071, 1141, 1289
PaeI	GCATGC	1 cut(s)	1141
PagI	TCATGA	2 cut(s)	1032, 1870
PceI	AGGCCT	1 cut(s)	1749
PciI	ACATGT	2 cut(s)	548, 1067
PciSI	GCTCTTC	2 cut(s)	1368, 1898
PcsI	WCGNNNNNNNCGW	1 cut(s)	290
PctI	GAATGC	3 cut(s)	487, 864, 899
PdmI	GAANNNNTTC	1 cut(s)	39
PfeI	GAWTC	7 cut(s)	20, 166, 1516, 1700, 1772, 1949, 2066
PflMI	CCANNNNNTGG	1 cut(s)	126
PfoI	TCCNGGA	2 cut(s)	642, 1271
PkrI	GCNGC	7 cut(s)	233, 511, 864, 904, 1063, 1503, 1867
Ppu21I	YACGTR	1 cut(s)	388
PscI	ACATGT	2 cut(s)	548, 1067
PsiI	TTATAA	1 cut(s)	476
Psp124BI	GAGCTC	1 cut(s)	1380
Psp1406I	AACGTT	2 cut(s)	219, 1978
Psp6I	CCWGG	4 cut(s)	125, 642, 1271, 2053
PspFI	CCCAGC	2 cut(s)	790, 1762
PspGI	CCWGG	4 cut(s)	125, 642, 1271, 2053
PspN4I	GGNNCC	3 cut(s)	492, 1270, 1646
PspPI	GGNCC	1 cut(s)	1971
PstI	CTGCAG	2 cut(s)	675, 904
PsuI	RGATCY	1 cut(s)	1779
PvuII	CAGCTG	3 cut(s)	790, 1307, 1693
RsaI	GTAC	2 cut(s)	386, 1335
RsaNI	GTAC	2 cut(s)	385, 1334
RseI	CAYNNNNRTG	1 cut(s)	765
SacI	GAGCTC	1 cut(s)	1380
SapI	GCTCTTC	2 cut(s)	1368, 1898
SaqAI	TTAA	7 cut(s)	161, 411, 503, 1179, 1365, 1530, 2048
SatI	GCNGC	7 cut(s)	232, 510, 863, 903, 1062, 1502, 1866
Sau3AI	GATC	7 cut(s)	270, 281, 467, 688, 1029, 1779, 1826
Sau96I	GGNCC	1 cut(s)	1971
SbfI	CCTGCAGG	1 cut(s)	675
ScrFI	CCNGG	5 cut(s)	6, 127, 644, 1273, 2055
SdaI	CCTGCAGG	1 cut(s)	675
SduI	GDGCHC	3 cut(s)	991, 1380, 1910
SfaNI	GCATC	4 cut(s)	1460, 1512, 1612, 1852
SfcI	CTRYAG	4 cut(s)	671, 900, 1495, 1857
SmiMI	CAYNNNNRTG	1 cut(s)	765
SmlI	CTYRAG	5 cut(s)	95, 1012, 1398, 1733, 2082
SmoI	CTYRAG	5 cut(s)	95, 1012, 1398, 1733, 2082
SnaBI	TACGTA	1 cut(s)	388
SphI	GCATGC	1 cut(s)	1141
Sse8387I	CCTGCAGG	1 cut(s)	675
SseBI	AGGCCT	1 cut(s)	1749
SsiI	CCGC	6 cut(s)	27, 135, 231, 444, 827, 862
SstI	GAGCTC	1 cut(s)	1380
StuI	AGGCCT	1 cut(s)	1749
StyD4I	CCNGG	5 cut(s)	4, 125, 642, 1271, 2053
StyI	CCWWGG	2 cut(s)	54, 1290
TaaI	ACNGT	2 cut(s)	157, 261
TaiI	ACGT	4 cut(s)	222, 390, 1981, 2131
TaqI	TCGA	5 cut(s)	50, 681, 1755, 1794, 2139
TatI	WGTACW	1 cut(s)	1333
TauI	GCSGC	2 cut(s)	234, 865
TfiI	GAWTC	7 cut(s)	20, 166, 1516, 1700, 1772, 1949, 2066
Tru1I	TTAA	7 cut(s)	161, 411, 503, 1179, 1365, 1530, 2048
Tru9I	TTAA	7 cut(s)	161, 411, 503, 1179, 1365, 1530, 2048
TscAI	CASTG	5 cut(s)	256, 266, 973, 1579, 2103
TseFI	GTSAC	2 cut(s)	151, 251
TseI	GCWGC	5 cut(s)	509, 902, 1061, 1501, 1865
Tsp45I	GTSAC	2 cut(s)	151, 251
TspDTI	ATGAA	8 cut(s)	935, 1572, 1601, 1740, 1887, 1916, 1941, 2050
TspGWI	ACGGA	2 cut(s)	207, 282
TspRI	CASTG	5 cut(s)	256, 266, 973, 1579, 2103
Van91I	CCANNNNNTGG	1 cut(s)	126
XapI	RAATTY	3 cut(s)	884, 1215, 1262
XceI	RCATGY	4 cut(s)	552, 1071, 1141, 1289
XmnI	GAANNNNTTC	1 cut(s)	39
Zsp2I	ATGCAT	1 cut(s)	1143

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.