RLG00000010809

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0015152
Physical Location & Seq
Forward (+)
4480847 .. 4487554
6708 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010809

Sequence Viewer

Length: 1758 bp
ATGGAGTACAGCAAGGACATAAATTCACTCCTTGGTAGTCTCGATTCGGGTCCTGATCCGGTGATTGACGACCCGAAGATGGTTTTAAAGAGAACTGAGGAGCCTACCTCTATAAAAGCTGCTTGGGAGCTGATGGAGATATTTTATGCGGACAAGCAGTCTCAGCCCTGGCAACTGGAACGGCTTGTTGATTGGTTGGCTGATTATGATAGCCTGCTCTCGAGTACTCACCCAACAGTCCATTCTAAACTTGTGGATTTCCAAAATGAACTTTCCAGCTTACAGGTTATTGAGGATACTCCTAAATATTGGGATGTGTTATCATCAGCACTTGCAGTTGGCTGGATTGATGTTGTGGTGAAAATGTTACGCTTACATGGATCTTATCAACTCCATCAGCTTGGCAACCGTGAGACAGAAAATGGACTTGTAGAGGCGGTTGCTGTTCTTATTTCAAAGAAGCCACGCATGCGTCCAGGAGTAGAAGATGGAAAGTTGGGTGAATGCTTTAAAGCAAAGCCTGATTTTATCAAGGCATGGGAGAATTGGAGAGCACAAATTACAAAGCTAGACTGCAGTGGATTCTGGCTTCAGTGTGATCACCATCAAACCCGGGAGGGATTGAAAAATATGATACAGGTTATGCTTGGAAACATTGACAGTCTCTGCGATGAAACTTGCCACTGGATAGAGCTGTTCATCTCTCACTTTCTATACGTCAGGCCATTAACAGTGGGTCTCGAAAACATGTATGGCCTAGCCCAGAAATGCTTACAATTGAAACCAATGTTGGGTGCCCATAGGTTGATAGATATTATTCTTGGAATCCTTGGGGAAAATACTGAGGTTGTCTTGGCGGAATGCTCTAGAGCATTTGGGCCTTGGATGGTTGCCCATGCCATTGAGTTGTTGACTACTGGGAGTGATCACGCAGAAAGTCTTCTACATGAAGAGCGCTATAACTTGGGTGGAATTAGTATAGCAGAACTACATCGGCTTGTCTACGCTCAGGTTTTATCATCACATGCATTGACTTGGCAAATTGCTCCAATCTATTTGTCATCGTGCATGAAGCAGGGAATGGGTTTGTTAGAGATTCTATTGTCTAAGCTGCCTATTGAACATAATGAAACACTGCTTAAGAATATAGAGATTTGTCGTCTTTACGAACTTGATACTGTTAGTTCAAATGTAATGAAGATTGCAGGGGTTTACCATTGGAAACATGGTAGGAAAGGTTGTGGAGTTTTCTGGCTTCAGCAAGCCCGAGATGAAGTTCGCCTTACCAGGATTGCTCAACATTTGTTTGATTCTGTTGGAAAGTCGATCTCCGATGAGAGTTTCAAGCAATGGGAAGGCTTGATTGAATTGTTGGGGTCTGAGTCCAAGACTACTGGGGGTCTAGACTTCCTGCACAAGTATAGGGATTTCAAGAAGTCCCTCAAGCAGGTTCGTGATGGAAAAACTACTGATGCTGCCCATCAAGCTGTAGAATCTCTGATATCGCTCATGAAAAACCCATCTACTCCTCAGCGCTTCTGGCTGCCTCTTCTTCATGACTCGCTGAAGCTGCTAAACTGGCAGGAGCGTCCTCTGCTAAATGTCCCTCAGACAGACCTCTTGCTCAATAAACTGGAAGAGTTGTCCATGGCTAAGCTCCGTCCAGACTTTATTGAAGCAGACTTGCCATCAGAGGCCCTGAGTTGTGTGAGGTTGGCTCTTGCTTCAAATCTTGGACGTGCCATCTTGGAGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
Nucleopor_Nup85

Protein Analysis

586

Amino Acids

66.38

Weight (kDa)

5.75

Isoelectric Point (pI)

39.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nucleopor_Nup85 PF07575 2 - 547 3.2e-134 Nup85 Nucleoporin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015152)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G32910
fragaria_vesca FvH4_2g35520
malus_domestica MD15G1093200.v1.1
prunus_persica Prupe.1G448000_v2.0.a1
pyrus_communis pycom15g08600
rosa_chinensis RchiOBHm_Chr6g0306261
rosa_laevigata RLG00000010809
rosa_multiflora Rmu_sc0017002.1_g000002 Rmu_sc0037804.1_g000002
rosa_roxburghii Rroxscaffold_7G00161900
rosa_rugosa Rorug06G0348400
rosa_samantha Rh6AG460900 Rh6BG440100 Rh6CG475200 Rh6DG461500
rosa_wichuraiana Rw6G040160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1438
AccB1I GGYRCC 1 cut(s) 794
AccI GTMKAC 1 cut(s) 1002
AciI CCGC 3 cut(s) 149, 437, 857
AclWI GGATC 2 cut(s) 50, 388
AcsI RAATTY 1 cut(s) 22
AcuI CTGAAG 3 cut(s) 575, 1241, 1586
AfaI GTAC 2 cut(s) 8, 226
AfeI AGCGCT 2 cut(s) 956, 1535
AfiI CCNNNNNNNGG 3 cut(s) 79, 791, 1447
AflII CTTAAG 1 cut(s) 1139
AflIII ACRYGT 1 cut(s) 747
AhdI GACNNNNNGTC 1 cut(s) 157
AjiI CACGTC 1 cut(s) 1739
AjnI CCWGG 3 cut(s) 167, 475, 1286
AjuI GAANNNNNNNTTGG 4 cut(s) 226, 258, 773, 805
Alw21I GWGCWC 1 cut(s) 556
Alw26I GTCTC 5 cut(s) 44, 165, 407, 668, 743
AlwI GGATC 2 cut(s) 50, 388
AlwNI CAGNNNCTG 1 cut(s) 666
Ama87I CYCGRG 3 cut(s) 220, 612, 1266
Aor51HI AGCGCT 2 cut(s) 956, 1535
AoxI GGCC 4 cut(s) 722, 754, 878, 1695
ApeKI GCWGC 5 cut(s) 119, 1111, 1475, 1543, 1570
ApoI RAATTY 1 cut(s) 22
Asp700I GAANNNNTTC 1 cut(s) 939
AspLEI GCGC 2 cut(s) 957, 1536
AspS9I GGNCC 3 cut(s) 50, 878, 1696
AsuC2I CCSGG 2 cut(s) 613, 614
AsuHPI GGTGA 5 cut(s) 73, 221, 370, 512, 593
AvaI CYCGRG 3 cut(s) 220, 612, 1266
AvaII GGWCC 1 cut(s) 50
BaeGI GKGCMC 1 cut(s) 799
BanI GGYRCC 1 cut(s) 794
BbsI GAAGAC 1 cut(s) 932
Bbv12I GWGCWC 1 cut(s) 556
BbvCI CCTCAGC 1 cut(s) 1530
BbvI GCAGC 5 cut(s) 106, 1098, 1462, 1530, 1557
BceAI ACGGC 1 cut(s) 197
BciT130I CCWGG 3 cut(s) 169, 477, 1288
BciVI GTATCC 1 cut(s) 289
BclI TGATCA 2 cut(s) 598, 925
BcnI CCSGG 2 cut(s) 613, 614
BcoDI GTCTC 5 cut(s) 44, 165, 407, 668, 743
BfaI CTAG 4 cut(s) 569, 758, 867, 1403
BfmI CTRYAG 2 cut(s) 574, 1488
BfoI RGCGCY 2 cut(s) 958, 1537
BfrI CTTAAG 1 cut(s) 1139
BfuAI ACCTGC 1 cut(s) 1438
BfuI GTATCC 1 cut(s) 289
BisI GCNGC 5 cut(s) 120, 1112, 1476, 1544, 1571
BlpI GCTNAGC 1 cut(s) 1653
BlsI GCNGC 5 cut(s) 121, 1113, 1477, 1545, 1572
BmcAI AGTACT 1 cut(s) 226
Bme1390I CCNGG 5 cut(s) 169, 477, 613, 614, 1288
Bme18I GGWCC 1 cut(s) 50
BmeRI GACNNNNNGTC 1 cut(s) 157
BmeT110I CYCGRG 3 cut(s) 220, 612, 1266
BmgBI CACGTC 1 cut(s) 1739
BmgT120I GGNCC 3 cut(s) 50, 878, 1696
BmiI GGNNCC 3 cut(s) 51, 102, 796
BmrFI CCNGG 5 cut(s) 169, 477, 613, 614, 1288
BmrI ACTGGG 2 cut(s) 927, 1404
BmsI GCATC 1 cut(s) 1462
BmuI ACTGGG 2 cut(s) 927, 1404
BpiI GAAGAC 1 cut(s) 932
BplI GAGNNNNNCTC 4 cut(s) 92, 124, 1702, 1734
Bpu10I CCTNAGC 2 cut(s) 1008, 1530
Bpu1102I GCTNAGC 1 cut(s) 1653
BpuEI CTTGAG 1 cut(s) 1427
BpuMI CCSGG 2 cut(s) 613, 614
BsaBI GATNNNNATC 1 cut(s) 603
BsaI GGTCTC 1 cut(s) 743
BsaJI CCNNGG 6 cut(s) 31, 167, 612, 829, 881, 1647
BsaWI WCCGGW 1 cut(s) 58
Bsc4I CCNNNNNNNGG 3 cut(s) 79, 791, 1447
Bse1I ACTGG 6 cut(s) 180, 689, 922, 1399, 1583, 1638
Bse3DI GCAATG 1 cut(s) 1355
Bse8I GATNNNNATC 1 cut(s) 603
BseBI CCWGG 3 cut(s) 169, 477, 1288
BseDI CCNNGG 6 cut(s) 31, 167, 612, 829, 881, 1647
BseGI GGATG 2 cut(s) 319, 891
BseJI GATNNNNATC 1 cut(s) 603
BseLI CCNNNNNNNGG 3 cut(s) 79, 791, 1447
BseMI GCAATG 1 cut(s) 1355
BseMII CTCAG 8 cut(s) 87, 176, 834, 1022, 1371, 1544, 1622, 1691
BseNI ACTGG 6 cut(s) 180, 689, 922, 1399, 1583, 1638
BseRI GAGGAG 2 cut(s) 113, 1518
BseSI GKGCMC 1 cut(s) 799
BseXI GCAGC 5 cut(s) 106, 1098, 1462, 1530, 1557
BsgI GTGCAG 1 cut(s) 1397
BshFI GGCC 4 cut(s) 724, 756, 880, 1697
BshNI GGYRCC 1 cut(s) 794
BsiHKAI GWGCWC 1 cut(s) 556
BsiHKCI CYCGRG 3 cut(s) 220, 612, 1266
BsiSI CCGG 2 cut(s) 59, 613
BslFI GGGAC 2 cut(s) 1423, 1589
BslI CCNNNNNNNGG 3 cut(s) 79, 791, 1447
BsmAI GTCTC 5 cut(s) 44, 165, 407, 668, 743
BsmFI GGGAC 2 cut(s) 1423, 1589
BsmI GAATGC 2 cut(s) 509, 866
BsnI GGCC 4 cut(s) 724, 756, 880, 1697
Bso31I GGTCTC 1 cut(s) 743
BsoBI CYCGRG 3 cut(s) 220, 612, 1266
Bsp1286I GDGCHC 2 cut(s) 556, 799
Bsp143I GATC 5 cut(s) 55, 380, 598, 925, 1326
Bsp1720I GCTNAGC 1 cut(s) 1653
Bsp19I CCATGG 1 cut(s) 1647
BspACI CCGC 3 cut(s) 149, 437, 857
BspANI GGCC 4 cut(s) 724, 756, 880, 1697
BspCNI CTCAG 8 cut(s) 88, 175, 835, 1021, 1372, 1543, 1621, 1692
BspHI TCATGA 2 cut(s) 1509, 1555
BspLI GGNNCC 3 cut(s) 51, 102, 796
BspMAI CTGCAG 1 cut(s) 578
BspMI ACCTGC 1 cut(s) 1438
BspPI GGATC 2 cut(s) 50, 388
BspQI GCTCTTC 1 cut(s) 945
BspT107I GGYRCC 1 cut(s) 794
BspTI CTTAAG 1 cut(s) 1139
BspTNI GGTCTC 1 cut(s) 743
BsrDI GCAATG 1 cut(s) 1355
BsrI ACTGG 6 cut(s) 180, 689, 922, 1399, 1583, 1638
BssECI CCNNGG 6 cut(s) 31, 167, 612, 829, 881, 1647
BssMI GATC 5 cut(s) 55, 380, 598, 925, 1326
BssT1I CCWWGG 4 cut(s) 31, 829, 881, 1647
Bst2UI CCWGG 3 cut(s) 169, 477, 1288
Bst4CI ACNGT 5 cut(s) 238, 410, 662, 733, 1180
Bst6I CTCTTC 3 cut(s) 945, 1554, 1632
BstAFI CTTAAG 1 cut(s) 1139
BstC8I GCNNGC 3 cut(s) 215, 470, 1263
BstDSI CCRYGG 1 cut(s) 1647
BstENI CCTNNNNNAGG 1 cut(s) 1445
BstF5I GGATG 2 cut(s) 319, 891
BstH2I RGCGCY 2 cut(s) 958, 1537
BstHHI GCGC 2 cut(s) 957, 1536
BstKTI GATC 5 cut(s) 58, 383, 601, 928, 1329
BstMAI GTCTC 5 cut(s) 44, 165, 407, 668, 743
BstMBI GATC 5 cut(s) 55, 380, 598, 925, 1326
BstMWI GCNNNNNNNGC 7 cut(s) 163, 469, 1484, 1540, 1570, 1579, 1594
BstNI CCWGG 3 cut(s) 169, 477, 1288
BstNSI RCATGY 3 cut(s) 472, 751, 1028
BstSCI CCNGG 5 cut(s) 167, 475, 611, 612, 1286
BstSFI CTRYAG 2 cut(s) 574, 1488
BstSLI GKGCMC 1 cut(s) 799
BstV1I GCAGC 5 cut(s) 106, 1098, 1462, 1530, 1557
BstV2I GAAGAC 1 cut(s) 932
BstX2I RGATCY 1 cut(s) 380
BstXI CCANNNNNNTGG 1 cut(s) 401
BstYI RGATCY 1 cut(s) 380
BsuI GTATCC 1 cut(s) 289
BsuRI GGCC 4 cut(s) 724, 756, 880, 1697
BtgI CCRYGG 1 cut(s) 1647
BtgZI GCGATG 1 cut(s) 684
BtrI CACGTC 1 cut(s) 1739
BtsCI GGATG 2 cut(s) 319, 891
BtsI GCAGTG 2 cut(s) 583, 1133
BtsIMutI CAGTG 5 cut(s) 583, 599, 682, 738, 1133
BveI ACCTGC 1 cut(s) 1438
Cac8I GCNNGC 3 cut(s) 215, 470, 1263
CaiI CAGNNNCTG 1 cut(s) 666
CciI TCATGA 2 cut(s) 1509, 1555
CfoI GCGC 2 cut(s) 957, 1536
Cfr13I GGNCC 3 cut(s) 50, 878, 1696
Cfr9I CCCGGG 1 cut(s) 612
CseI GACGC 2 cut(s) 461, 1577
Csp6I GTAC 2 cut(s) 7, 225
CviQI GTAC 2 cut(s) 7, 225
DpnI GATC 5 cut(s) 57, 382, 600, 927, 1328
DpnII GATC 5 cut(s) 55, 380, 598, 925, 1326
DraI TTTAAA 2 cut(s) 87, 511
DriI GACNNNNNGTC 1 cut(s) 157
Eam1104I CTCTTC 3 cut(s) 945, 1554, 1632
Eam1105I GACNNNNNGTC 1 cut(s) 157
EarI CTCTTC 3 cut(s) 945, 1554, 1632
EciI GGCGGA 1 cut(s) 872
Eco130I CCWWGG 4 cut(s) 31, 829, 881, 1647
Eco31I GGTCTC 1 cut(s) 743
Eco32I GATATC 1 cut(s) 1503
Eco47I GGWCC 1 cut(s) 50
Eco47III AGCGCT 2 cut(s) 956, 1535
Eco57I CTGAAG 3 cut(s) 575, 1241, 1586
Eco88I CYCGRG 3 cut(s) 220, 612, 1266
EcoNI CCTNNNNNAGG 1 cut(s) 1445
EcoO109I RGGNCCY 2 cut(s) 50, 1696
EcoRII CCWGG 3 cut(s) 167, 475, 1286
EcoRV GATATC 1 cut(s) 1503
EcoT14I CCWWGG 4 cut(s) 31, 829, 881, 1647
EcoT22I ATGCAT 1 cut(s) 1030
ErhI CCWWGG 4 cut(s) 31, 829, 881, 1647
FalI AAGNNNNNCTT 2 cut(s) 1266, 1298
FaqI GGGAC 2 cut(s) 1423, 1589
FbaI TGATCA 2 cut(s) 598, 925
FblI GTMKAC 1 cut(s) 1002
Fnu4HI GCNGC 5 cut(s) 120, 1112, 1476, 1544, 1571
FokI GGATG 2 cut(s) 326, 898
Fsp4HI GCNGC 5 cut(s) 120, 1112, 1476, 1544, 1571
FspBI CTAG 4 cut(s) 569, 758, 867, 1403
GlaI GCGC 2 cut(s) 956, 1535
GluI GCNGC 5 cut(s) 120, 1112, 1476, 1544, 1571
HaeII RGCGCY 2 cut(s) 958, 1537
HaeIII GGCC 4 cut(s) 724, 756, 880, 1697
HapII CCGG 2 cut(s) 59, 613
HgaI GACGC 2 cut(s) 461, 1577
HhaI GCGC 2 cut(s) 957, 1536
Hin6I GCGC 2 cut(s) 955, 1534
HinP1I GCGC 2 cut(s) 955, 1534
HincII GTYRAC 1 cut(s) 912
HindII GTYRAC 1 cut(s) 912
HinfI GANTC 8 cut(s) 44, 582, 825, 1096, 1310, 1382, 1493, 1559
HpaII CCGG 2 cut(s) 59, 613
HphI GGTGA 5 cut(s) 73, 221, 370, 512, 593
Hpy166II GTNNAC 3 cut(s) 912, 1003, 1213
Hpy188I TCNGA 5 cut(s) 1333, 1381, 1500, 1611, 1693
Hpy8I GTNNAC 3 cut(s) 912, 1003, 1213
HpyAV CCTTC 1 cut(s) 1349
HpyCH4III ACNGT 5 cut(s) 238, 410, 662, 733, 1180
HpyCH4IV ACGT 2 cut(s) 717, 1738
HpyCH4V TGCA 6 cut(s) 335, 576, 1028, 1068, 1205, 1414
HpyF10VI GCNNNNNNNGC 7 cut(s) 163, 469, 1484, 1540, 1570, 1579, 1594
HpySE526I ACGT 2 cut(s) 717, 1738
HspAI GCGC 2 cut(s) 955, 1534
Ksp22I TGATCA 2 cut(s) 598, 925
Kzo9I GATC 5 cut(s) 55, 380, 598, 925, 1326
LguI GCTCTTC 1 cut(s) 945
LmnI GCTCC 5 cut(s) 100, 127, 1051, 1585, 1662
Lsp1109I GCAGC 5 cut(s) 106, 1098, 1462, 1530, 1557
LweI GCATC 1 cut(s) 1462
MaeI CTAG 4 cut(s) 569, 758, 867, 1403
MaeII ACGT 2 cut(s) 717, 1738
MaeIII GTNAC 1 cut(s) 366
MalI GATC 5 cut(s) 57, 382, 600, 927, 1328
MboI GATC 5 cut(s) 55, 380, 598, 925, 1326
MboII GAAGA 8 cut(s) 88, 497, 932, 962, 1210, 1541, 1544, 1649
MfeI CAATTG 1 cut(s) 776
MflI RGATCY 1 cut(s) 380
MhlI GDGCHC 2 cut(s) 556, 799
MluCI AATT 7 cut(s) 22, 544, 558, 776, 972, 1041, 1367
MlyI GAGTC 2 cut(s) 1391, 1553
MmeI TCCRAC 1 cut(s) 1297
Mph1103I ATGCAT 1 cut(s) 1030
MroXI GAANNNNTTC 1 cut(s) 939
MseI TTAA 4 cut(s) 86, 510, 728, 1140
MspCI CTTAAG 1 cut(s) 1139
MspI CCGG 2 cut(s) 59, 613
MspR9I CCNGG 5 cut(s) 169, 477, 613, 614, 1288
MunI CAATTG 1 cut(s) 776
Mva1269I GAATGC 2 cut(s) 509, 866
MvaI CCWGG 3 cut(s) 169, 477, 1288
MwoI GCNNNNNNNGC 7 cut(s) 163, 469, 1484, 1540, 1570, 1579, 1594
NciI CCSGG 2 cut(s) 613, 614
NcoI CCATGG 1 cut(s) 1647
NdeII GATC 5 cut(s) 55, 380, 598, 925, 1326
NlaIV GGNNCC 3 cut(s) 51, 102, 796
NsiI ATGCAT 1 cut(s) 1030
NspI RCATGY 3 cut(s) 472, 751, 1028
PaeI GCATGC 1 cut(s) 472
PaeR7I CTCGAG 1 cut(s) 220
PagI TCATGA 2 cut(s) 1509, 1555
PciI ACATGT 1 cut(s) 747
PciSI GCTCTTC 1 cut(s) 945
PctI GAATGC 2 cut(s) 509, 866
PdmI GAANNNNTTC 1 cut(s) 939
PfeI GAWTC 6 cut(s) 44, 582, 825, 1096, 1310, 1493
PfoI TCCNGGA 1 cut(s) 475
PkrI GCNGC 5 cut(s) 121, 1113, 1477, 1545, 1572
PleI GAGTC 2 cut(s) 1390, 1553
PpsI GAGTC 2 cut(s) 1390, 1553
PpuMI RGGWCCY 1 cut(s) 50
PscI ACATGT 1 cut(s) 747
Psp5II RGGWCCY 1 cut(s) 50
Psp6I CCWGG 3 cut(s) 167, 475, 1286
PspGI CCWGG 3 cut(s) 167, 475, 1286
PspN4I GGNNCC 3 cut(s) 51, 102, 796
PspPI GGNCC 3 cut(s) 50, 878, 1696
PspPPI RGGWCCY 1 cut(s) 50
PstI CTGCAG 1 cut(s) 578
PstNI CAGNNNCTG 1 cut(s) 666
PsuI RGATCY 1 cut(s) 380
RsaI GTAC 2 cut(s) 8, 226
RsaNI GTAC 2 cut(s) 7, 225
SapI GCTCTTC 1 cut(s) 945
SaqAI TTAA 4 cut(s) 86, 510, 728, 1140
SatI GCNGC 5 cut(s) 120, 1112, 1476, 1544, 1571
Sau3AI GATC 5 cut(s) 55, 380, 598, 925, 1326
Sau96I GGNCC 3 cut(s) 50, 878, 1696
ScaI AGTACT 1 cut(s) 226
SchI GAGTC 2 cut(s) 1391, 1553
ScrFI CCNGG 5 cut(s) 169, 477, 613, 614, 1288
SduI GDGCHC 2 cut(s) 556, 799
SfaNI GCATC 1 cut(s) 1462
SfcI CTRYAG 2 cut(s) 574, 1488
Sfr274I CTCGAG 1 cut(s) 220
SinI GGWCC 1 cut(s) 50
SlaI CTCGAG 1 cut(s) 220
SmaI CCCGGG 1 cut(s) 614
SmlI CTYRAG 3 cut(s) 220, 1139, 1442
SmoI CTYRAG 3 cut(s) 220, 1139, 1442
SphI GCATGC 1 cut(s) 472
Sse9I AATT 7 cut(s) 22, 544, 558, 776, 972, 1041, 1367
SsiI CCGC 3 cut(s) 149, 437, 857
SspI AATATT 1 cut(s) 308
SspMI CTAG 4 cut(s) 569, 758, 867, 1403
StyD4I CCNGG 5 cut(s) 167, 475, 611, 612, 1286
StyI CCWWGG 4 cut(s) 31, 829, 881, 1647
TaaI ACNGT 5 cut(s) 238, 410, 662, 733, 1180
TaiI ACGT 2 cut(s) 720, 1741
TaqI TCGA 4 cut(s) 42, 221, 741, 1325
TasI AATT 7 cut(s) 22, 544, 558, 776, 972, 1041, 1367
TatI WGTACW 2 cut(s) 6, 224
TfiI GAWTC 6 cut(s) 44, 582, 825, 1096, 1310, 1493
Tru1I TTAA 4 cut(s) 86, 510, 728, 1140
Tru9I TTAA 4 cut(s) 86, 510, 728, 1140
TscAI CASTG 5 cut(s) 583, 599, 689, 738, 1140
TseI GCWGC 5 cut(s) 119, 1111, 1475, 1543, 1570
TspGWI ACGGA 1 cut(s) 1649
TspMI CCCGGG 1 cut(s) 612
TspRI CASTG 5 cut(s) 583, 599, 689, 738, 1140
Vha464I CTTAAG 1 cut(s) 1139
VpaK11BI GGWCC 1 cut(s) 50
XagI CCTNNNNNAGG 1 cut(s) 1445
XapI RAATTY 1 cut(s) 22
XbaI TCTAGA 2 cut(s) 866, 1402
XceI RCATGY 3 cut(s) 472, 751, 1028
XcmI CCANNNNNNNNNTGG 1 cut(s) 1223
XhoI CTCGAG 1 cut(s) 220
XmaI CCCGGG 1 cut(s) 612
XmiI GTMKAC 1 cut(s) 1002
XmnI GAANNNNTTC 1 cut(s) 939
XspI CTAG 4 cut(s) 569, 758, 867, 1403
ZrmI AGTACT 1 cut(s) 226
Zsp2I ATGCAT 1 cut(s) 1030
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.