Prupe.1G448000_v2.0.a1

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0015152
Physical Location & Seq
Forward (+)
37839288 .. 37846735
7448 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G448000.1

Sequence Viewer

Length: 2175 bp
ATGCCCGGCGTCGCCTCAGGCTCCGGCGATACGCGCGGCGCCTCAGGCTCCAACGACAGTTCTCTGGTCCCATATTTGCCGGAGCTCCGGCAACCCGTCGTCTATTCACTTCACCACGGCCTCAAGCCTCCGATCGGTCGCCTTTCCATCTCGTGGTCCCGGGGCAACAATCTGCGCGTGTCGGTTCTCCGGCCACCGTCCGCAGAAGACTCTGACGACGTCGAAGTTGGCGGGAGAGTTGTGGAGGTGAGGCTCAGTAATGGAGACGGCGAAACTGGTGATGCGAAGTGGCGGAGGATCGCGTACGGTTCCGTTCCACCATTCGCGCTTCTCCAGAGCCGGAGGAGCTCTGTCGCGAGCTTATCGAAGATGTCAATGAGTCCGTCGCCGTATAACATCGATTGGTGGGAGTATGTGATGGAGTACAGCAAGGACATAAATTCACTTCTCGGTGACTCCAAGGCGCCTCCTAATCCAGTGATTGACGACCCGAAGACGGTTTTAAGGAACGTTGAGGAGCCTACCTCTTTAAAAGCGGCGTGGGAGCTAATGGAGATGTTTTATGCTGACAAACAATGCCAATCATGGCTACTGGAAAGGCTTGTTGATTGGTTGGCTGATTATGATAGTCTACTTTCGAGTACACAGCCAACTGTCCATTCGAAGCTTGTGGATTTTCAAAATGAACTTGTCGGCTTACAGGTTATTGAGGACAATCCTAAATATTGGGAAGTGTTATCATCAGCACTGGCAGTTGGCTGGATTGAGATTGTGGTGAAAATGTTGCGGTTACATGGATCTTATCAATTCCATCAGCTTGGCAACCGTGAGATAGAGAATGGACTTGTAGAGACAGTTTCTTTTCTTATTTCAAAGATGCCACGCATGCGTCCTGAAGTAGAATATGGAAGGTTAGGTGAATGCTACAAAGCAAAGCCCGATTTTATCAAGGCATGGGAGAAATGGAGAGGGAAAATTACTAAACTCGACTGCAGTGCATTCTGGCTTCAATGTGATCACCGTCAAACCCGGGAGGGATTGAAAAATATGATACAAATTATGCTAGGAAACACTGACAATATCTGCAATGTAACTTGCCATTGGATAGAGCTGTTTATTTCTCACTTTCTCTATGTCAGGCCATTCACAGTGGGTCTTGAAAGCATGTATAGCCTAGCCCAGAAATGCATGCAGTTGAAACCAATGTCTAGTGCCCATGGGTTGATAGCAATTATTCTTGGAATCCTTGGGGAAAATACTGAGGTTATCTTAGCGGAATGCTCAAGAGCATTTGGGCCTTGGATGGTTGCCCATGCCATTGAGTTGTTGACCACTGGGAGTGACGAAGCAGAATTTCTTCTACAGGAAGAACGCCATAGCTTGGGGGGAATTAGTATAGCAGAGTTACATCGACTTGTCTATGCTCAAGTTCTATCATCACATCCATTGACTTGGCAAATTGCTCCAATTTATTTGACATCGTGCATGAAACAGGGAATGGGTTTGTTAGAGATTCTGTTGTATAAGCTGCCTATTCAACATAATGAAACACTTCTTAAGAATTTAGAGATATGCCGACTTTATGAACTTGATACCATTAGTTCAAACATTATGAAGATTGCTGGCGTGTACCATTGGAAGCATGGTAGGAAAGGTTCTGGAGTTTTTTGGCTACAGCAAGCCCGAGATGAAATTCGTCTTAGCAGGATTGCTCAGCATTTGTTTGATTCAGTTGGAAAGTCAATCTCTGATGAAAGTTTTAAGCAATGGGAAGGCTTGATTGAATTGTTGGGTTCAGAATCCAAGACTACGGGGGGTCTTGAATTTTTGCACAAGTATCGGGACTTCAAAAAGTCCCTTAAGCAGGTTTATGGTGGAAAAACTACTGACACTGCTCGGCAAGCTGTAGAATCTTTGATATCGCTTATGAAAAACCCATCTACACCTCAGCGCTTTTGGCTGCCTATTCTGCATGACTCGTTAAAGCTGCTTAACTGGCAGGAGCGCCCTCTGCTAAATGTCTCTCAGACAAGCCTCTTGTTGAATAAACTGCAAGAGTTGTCCATGGCTAAGCTCCGCCCTGACTTCATCGAAGCAGACTTGCCACCACAGGCCCTCAGCTCTGTAAGATTAGCTCTTGCTACGAATCTCGGACGTGCCATCTTGGAGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
Nucleopor_Nup85

Protein Analysis

725

Amino Acids

81.79

Weight (kDa)

6.37

Isoelectric Point (pI)

48.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015152)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G32910
fragaria_vesca FvH4_2g35520
malus_domestica MD15G1093200.v1.1
prunus_persica Prupe.1G448000_v2.0.a1
pyrus_communis pycom15g08600
rosa_chinensis RchiOBHm_Chr6g0306261
rosa_laevigata RLG00000010809
rosa_multiflora Rmu_sc0017002.1_g000002 Rmu_sc0037804.1_g000002
rosa_roxburghii Rroxscaffold_7G00161900
rosa_rugosa Rorug06G0348400
rosa_samantha Rh6AG460900 Rh6BG440100 Rh6CG475200 Rh6DG461500
rosa_wichuraiana Rw6G040160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 222
Acc36I ACCTGC 1 cut(s) 1855
AccB1I GGYRCC 2 cut(s) 38, 463
AccB7I CCANNNNNTGG 2 cut(s) 153, 1381
AccI GTMKAC 1 cut(s) 631
AccII CGCG 6 cut(s) 34, 36, 177, 302, 326, 356
AciI CCGC 8 cut(s) 36, 201, 231, 292, 536, 787, 1274, 2077
AclI AACGTT 1 cut(s) 510
AclWI GGATC 2 cut(s) 305, 805
AcoI YGGCCR 1 cut(s) 191
AcsI RAATTY 5 cut(s) 439, 1352, 1561, 1692, 1823
AcuI CTGAAG 1 cut(s) 915
AcyI GRCGYC 4 cut(s) 9, 39, 219, 464
AfaI GTAC 4 cut(s) 305, 425, 643, 1631
AfeI AGCGCT 1 cut(s) 1952
AfiI CCNNNNNNNGG 5 cut(s) 134, 153, 496, 1381, 1864
AflII CTTAAG 2 cut(s) 1556, 1859
AjiI CACGTC 1 cut(s) 2156
AjuI GAANNNNNNNTTGG 2 cut(s) 643, 675
Alw21I GWGCWC 2 cut(s) 87, 350
Alw26I GTCTC 3 cut(s) 258, 845, 2026
AlwI GGATC 2 cut(s) 305, 805
Ama87I CYCGRG 3 cut(s) 159, 1029, 1683
Aor51HI AGCGCT 1 cut(s) 1952
AoxI GGCC 5 cut(s) 118, 191, 1139, 1295, 2112
ApeKI GCWGC 3 cut(s) 1528, 1960, 1987
ApoI RAATTY 5 cut(s) 439, 1352, 1561, 1692, 1823
Asp700I GAANNNNTTC 2 cut(s) 1356, 1551
AspLEI GCGC 7 cut(s) 36, 41, 177, 328, 466, 1953, 2007
AspS9I GGNCC 4 cut(s) 67, 156, 1295, 2113
AsuC2I CCSGG 5 cut(s) 6, 160, 161, 1030, 1031
AsuHPI GGTGA 7 cut(s) 104, 259, 290, 464, 787, 929, 1010
AsuII TTCGAA 1 cut(s) 662
AvaI CYCGRG 3 cut(s) 159, 1029, 1683
AvaII GGWCC 2 cut(s) 67, 156
AxyI CCTNAGG 2 cut(s) 16, 43
BaeGI GKGCMC 1 cut(s) 1216
BanI GGYRCC 2 cut(s) 38, 463
BanII GRGCYC 2 cut(s) 87, 350
BarI GAAGNNNNNNTAC 2 cut(s) 1829, 1861
BauI CACGAG 1 cut(s) 151
BbsI GAAGAC 2 cut(s) 213, 500
Bbv12I GWGCWC 2 cut(s) 87, 350
BbvCI CCTCAGC 2 cut(s) 1947, 2117
BbvI GCAGC 3 cut(s) 1515, 1947, 1974
BccI CCATC 6 cut(s) 155, 412, 819, 1297, 1945, 2168
BceAI ACGGC 3 cut(s) 133, 283, 373
BcgI CGANNNNNNTGC 4 cut(s) 977, 1011, 1820, 1854
BclI TGATCA 1 cut(s) 1015
BcnI CCSGG 5 cut(s) 6, 160, 161, 1030, 1031
BcoDI GTCTC 3 cut(s) 258, 845, 2026
BfaI CTAG 3 cut(s) 1064, 1175, 1209
BfmI CTRYAG 4 cut(s) 991, 1361, 1673, 1905
BfoI RGCGCY 4 cut(s) 42, 467, 1954, 2008
BfrI CTTAAG 2 cut(s) 1556, 1859
BfuAI ACCTGC 1 cut(s) 1855
BisI GCNGC 5 cut(s) 37, 537, 1529, 1961, 1988
BlpI GCTNAGC 2 cut(s) 1713, 2070
BlsI GCNGC 5 cut(s) 38, 538, 1530, 1962, 1989
Bme1390I CCNGG 5 cut(s) 6, 160, 161, 1030, 1031
Bme18I GGWCC 2 cut(s) 67, 156
BmeT110I CYCGRG 3 cut(s) 159, 1029, 1683
BmgBI CACGTC 1 cut(s) 2156
BmgT120I GGNCC 4 cut(s) 67, 156, 1295, 2113
BmiI GGNNCC 8 cut(s) 22, 40, 49, 69, 158, 310, 465, 519
BmrFI CCNGG 5 cut(s) 6, 160, 161, 1030, 1031
BmrI ACTGGG 1 cut(s) 1344
BmsI GCATC 2 cut(s) 271, 867
BmuI ACTGGG 1 cut(s) 1344
BpiI GAAGAC 2 cut(s) 213, 500
BplI GAGNNNNNCTC 2 cut(s) 509, 541
BpmI CTGGAG 2 cut(s) 317, 1680
Bpu10I CCTNAGC 2 cut(s) 1947, 2117
Bpu1102I GCTNAGC 2 cut(s) 1713, 2070
Bpu14I TTCGAA 1 cut(s) 662
BpuEI CTTGAG 3 cut(s) 107, 1267, 1410
BpuMI CCSGG 5 cut(s) 6, 160, 161, 1030, 1031
Bsa29I ATCGAT 1 cut(s) 399
BsaHI GRCGYC 4 cut(s) 9, 39, 219, 464
BsaJI CCNNGG 9 cut(s) 115, 159, 160, 459, 1029, 1216, 1246, 1298, 2064
Bsc4I CCNNNNNNNGG 5 cut(s) 134, 153, 496, 1381, 1864
Bse1I ACTGG 6 cut(s) 280, 476, 597, 753, 1339, 2000
Bse21I CCTNAGG 2 cut(s) 16, 43
Bse3DI GCAATG 2 cut(s) 1093, 1772
BseCI ATCGAT 1 cut(s) 399
BseDI CCNNGG 9 cut(s) 115, 159, 160, 459, 1029, 1216, 1246, 1298, 2064
BseGI GGATG 2 cut(s) 1308, 1441
BseLI CCNNNNNNNGG 5 cut(s) 134, 153, 496, 1381, 1864
BseMI GCAATG 2 cut(s) 1093, 1772
BseMII CTCAG 8 cut(s) 30, 57, 268, 1251, 1727, 1961, 2039, 2131
BseNI ACTGG 6 cut(s) 280, 476, 597, 753, 1339, 2000
BseRI GAGGAG 2 cut(s) 358, 530
BseSI GKGCMC 1 cut(s) 1216
BseXI GCAGC 3 cut(s) 1515, 1947, 1974
Bsh1236I CGCG 6 cut(s) 34, 36, 177, 302, 326, 356
Bsh1285I CGRYCG 2 cut(s) 135, 139
BshFI GGCC 5 cut(s) 120, 193, 1141, 1297, 2114
BshNI GGYRCC 2 cut(s) 38, 463
BshVI ATCGAT 1 cut(s) 399
BsiEI CGRYCG 2 cut(s) 135, 139
BsiHKAI GWGCWC 2 cut(s) 87, 350
BsiHKCI CYCGRG 3 cut(s) 159, 1029, 1683
BsiSI CCGG 8 cut(s) 6, 24, 80, 88, 160, 190, 340, 1030
BsiWI CGTACG 1 cut(s) 303
BslFI GGGAC 4 cut(s) 53, 142, 1840, 1856
BslI CCNNNNNNNGG 5 cut(s) 134, 153, 496, 1381, 1864
BsmAI GTCTC 3 cut(s) 258, 845, 2026
BsmBI CGTCTC 1 cut(s) 258
BsmFI GGGAC 4 cut(s) 53, 142, 1840, 1856
BsmI GAATGC 3 cut(s) 926, 998, 1283
BsnI GGCC 5 cut(s) 120, 193, 1141, 1297, 2114
BsoBI CYCGRG 3 cut(s) 159, 1029, 1683
Bsp119I TTCGAA 1 cut(s) 662
Bsp1286I GDGCHC 3 cut(s) 87, 350, 1216
Bsp143I GATC 4 cut(s) 132, 297, 797, 1015
Bsp1720I GCTNAGC 2 cut(s) 1713, 2070
Bsp19I CCATGG 2 cut(s) 1216, 2064
Bsp68I TCGCGA 1 cut(s) 356
BspACI CCGC 8 cut(s) 36, 201, 231, 292, 536, 787, 1274, 2077
BspANI GGCC 5 cut(s) 120, 193, 1141, 1297, 2114
BspCNI CTCAG 8 cut(s) 29, 56, 267, 1252, 1726, 1960, 2038, 2130
BspDI ATCGAT 1 cut(s) 399
BspFNI CGCG 6 cut(s) 34, 36, 177, 302, 326, 356
BspLI GGNNCC 8 cut(s) 22, 40, 49, 69, 158, 310, 465, 519
BspMAI CTGCAG 1 cut(s) 995
BspMI ACCTGC 1 cut(s) 1855
BspPI GGATC 2 cut(s) 305, 805
BspT104I TTCGAA 1 cut(s) 662
BspT107I GGYRCC 2 cut(s) 38, 463
BspTI CTTAAG 2 cut(s) 1556, 1859
BsrDI GCAATG 2 cut(s) 1093, 1772
BsrI ACTGG 6 cut(s) 280, 476, 597, 753, 1339, 2000
BssECI CCNNGG 9 cut(s) 115, 159, 160, 459, 1029, 1216, 1246, 1298, 2064
BssMI GATC 4 cut(s) 132, 297, 797, 1015
BssNI GRCGYC 4 cut(s) 9, 39, 219, 464
BssSI CACGAG 1 cut(s) 151
BssT1I CCWWGG 5 cut(s) 459, 1216, 1246, 1298, 2064
Bst2BI CACGAG 1 cut(s) 151
Bst4CI ACNGT 9 cut(s) 59, 198, 308, 499, 655, 827, 856, 1022, 1150
BstACI GRCGYC 4 cut(s) 9, 39, 219, 464
BstAFI CTTAAG 2 cut(s) 1556, 1859
BstBI TTCGAA 1 cut(s) 662
BstC8I GCNNGC 6 cut(s) 358, 887, 1190, 1624, 1680, 1902
BstDSI CCRYGG 3 cut(s) 115, 1216, 2064
BstENI CCTNNNNNAGG 1 cut(s) 1862
BstF5I GGATG 2 cut(s) 1308, 1441
BstFNI CGCG 6 cut(s) 34, 36, 177, 302, 326, 356
BstH2I RGCGCY 4 cut(s) 42, 467, 1954, 2008
BstHHI GCGC 7 cut(s) 36, 41, 177, 328, 466, 1953, 2007
BstKTI GATC 4 cut(s) 135, 300, 800, 1018
BstMAI GTCTC 3 cut(s) 258, 845, 2026
BstMBI GATC 4 cut(s) 132, 297, 797, 1015
BstMCI CGRYCG 2 cut(s) 135, 139
BstNSI RCATGY 3 cut(s) 889, 1168, 1192
BstSCI CCNGG 5 cut(s) 4, 158, 159, 1028, 1029
BstSFI CTRYAG 4 cut(s) 991, 1361, 1673, 1905
BstSLI GKGCMC 1 cut(s) 1216
BstUI CGCG 6 cut(s) 34, 36, 177, 302, 326, 356
BstV1I GCAGC 3 cut(s) 1515, 1947, 1974
BstV2I GAAGAC 2 cut(s) 213, 500
BstX2I RGATCY 1 cut(s) 797
BstXI CCANNNNNNTGG 2 cut(s) 818, 1452
BstYI RGATCY 1 cut(s) 797
Bsu15I ATCGAT 1 cut(s) 399
Bsu36I CCTNAGG 2 cut(s) 16, 43
BsuRI GGCC 5 cut(s) 120, 193, 1141, 1297, 2114
BsuTUI ATCGAT 1 cut(s) 399
BtgI CCRYGG 3 cut(s) 115, 1216, 2064
BtrI CACGTC 1 cut(s) 2156
BtsCI GGATG 2 cut(s) 1308, 1441
BtsI GCAGTG 2 cut(s) 1000, 1890
BtsIMutI CAGTG 7 cut(s) 483, 746, 1000, 1071, 1155, 1332, 1890
BtuMI TCGCGA 1 cut(s) 356
BveI ACCTGC 1 cut(s) 1855
Cac8I GCNNGC 6 cut(s) 358, 887, 1190, 1624, 1680, 1902
CfoI GCGC 7 cut(s) 36, 41, 177, 328, 466, 1953, 2007
Cfr13I GGNCC 4 cut(s) 67, 156, 1295, 2113
Cfr9I CCCGGG 2 cut(s) 159, 1029
ClaI ATCGAT 1 cut(s) 399
CseI GACGC 1 cut(s) 878
Csp6I GTAC 4 cut(s) 304, 424, 642, 1630
CviQI GTAC 4 cut(s) 304, 424, 642, 1630
DinI GGCGCC 2 cut(s) 40, 465
DpnI GATC 4 cut(s) 134, 299, 799, 1017
DpnII GATC 4 cut(s) 132, 297, 797, 1015
DraI TTTAAA 1 cut(s) 531
EaeI YGGCCR 1 cut(s) 191
EciI GGCGGA 2 cut(s) 307, 2066
Ecl136II GAGCTC 2 cut(s) 85, 348
Eco130I CCWWGG 5 cut(s) 459, 1216, 1246, 1298, 2064
Eco24I GRGCYC 2 cut(s) 87, 350
Eco32I GATATC 1 cut(s) 1920
Eco47I GGWCC 2 cut(s) 67, 156
Eco47III AGCGCT 1 cut(s) 1952
Eco53kI GAGCTC 2 cut(s) 85, 348
Eco57I CTGAAG 1 cut(s) 915
Eco81I CCTNAGG 2 cut(s) 16, 43
Eco88I CYCGRG 3 cut(s) 159, 1029, 1683
EcoICRI GAGCTC 2 cut(s) 85, 348
EcoNI CCTNNNNNAGG 1 cut(s) 1862
EcoO109I RGGNCCY 1 cut(s) 2113
EcoRV GATATC 1 cut(s) 1920
EcoT14I CCWWGG 5 cut(s) 459, 1216, 1246, 1298, 2064
EcoT22I ATGCAT 1 cut(s) 1190
EcoT38I GRGCYC 2 cut(s) 87, 350
EgeI GGCGCC 2 cut(s) 40, 465
EheI GGCGCC 2 cut(s) 40, 465
ErhI CCWWGG 5 cut(s) 459, 1216, 1246, 1298, 2064
Esp3I CGTCTC 1 cut(s) 258
FaqI GGGAC 4 cut(s) 53, 142, 1840, 1856
FauI CCCGC 1 cut(s) 224
FbaI TGATCA 1 cut(s) 1015
FblI GTMKAC 1 cut(s) 631
Fnu4HI GCNGC 5 cut(s) 37, 537, 1529, 1961, 1988
FokI GGATG 2 cut(s) 1315, 1428
FriOI GRGCYC 2 cut(s) 87, 350
Fsp4HI GCNGC 5 cut(s) 37, 537, 1529, 1961, 1988
FspBI CTAG 3 cut(s) 1064, 1175, 1209
GlaI GCGC 7 cut(s) 35, 40, 176, 327, 465, 1952, 2006
GluI GCNGC 5 cut(s) 37, 537, 1529, 1961, 1988
GsuI CTGGAG 2 cut(s) 317, 1680
HaeII RGCGCY 4 cut(s) 42, 467, 1954, 2008
HaeIII GGCC 5 cut(s) 120, 193, 1141, 1297, 2114
HapII CCGG 8 cut(s) 6, 24, 80, 88, 160, 190, 340, 1030
HgaI GACGC 1 cut(s) 878
HhaI GCGC 7 cut(s) 36, 41, 177, 328, 466, 1953, 2007
Hin1I GRCGYC 4 cut(s) 9, 39, 219, 464
Hin6I GCGC 7 cut(s) 34, 39, 175, 326, 464, 1951, 2005
HinP1I GCGC 7 cut(s) 34, 39, 175, 326, 464, 1951, 2005
HincII GTYRAC 1 cut(s) 1329
HindII GTYRAC 1 cut(s) 1329
HindIII AAGCTT 1 cut(s) 665
HpaII CCGG 8 cut(s) 6, 24, 80, 88, 160, 190, 340, 1030
HphI GGTGA 7 cut(s) 104, 259, 290, 464, 787, 929, 1010
Hpy166II GTNNAC 4 cut(s) 632, 644, 1329, 1630
Hpy188I TCNGA 6 cut(s) 132, 214, 1750, 1798, 2028, 2153
Hpy188III TCNNGA 8 cut(s) 334, 355, 893, 1157, 1284, 1659, 1820, 1841
Hpy8I GTNNAC 4 cut(s) 632, 644, 1329, 1630
Hpy99I CGWCG 5 cut(s) 14, 101, 221, 224, 388
HpyAV CCTTC 2 cut(s) 903, 1766
HpyCH4III ACNGT 9 cut(s) 59, 198, 308, 499, 655, 827, 856, 1022, 1150
HpyCH4IV ACGT 3 cut(s) 219, 510, 2155
HpyCH4V TGCA 9 cut(s) 993, 998, 1086, 1188, 1192, 1485, 1831, 1972, 2053
HpySE526I ACGT 3 cut(s) 219, 510, 2155
Hsp92I GRCGYC 4 cut(s) 9, 39, 219, 464
HspAI GCGC 7 cut(s) 34, 39, 175, 326, 464, 1951, 2005
KasI GGCGCC 2 cut(s) 38, 463
Ksp22I TGATCA 1 cut(s) 1015
Kzo9I GATC 4 cut(s) 132, 297, 797, 1015
Lsp1109I GCAGC 3 cut(s) 1515, 1947, 1974
LweI GCATC 2 cut(s) 271, 867
MaeI CTAG 3 cut(s) 1064, 1175, 1209
MaeII ACGT 3 cut(s) 219, 510, 2155
MaeIII GTNAC 5 cut(s) 452, 789, 1090, 1340, 1404
MalI GATC 4 cut(s) 134, 299, 799, 1017
MboI GATC 4 cut(s) 132, 297, 797, 1015
MboII GAAGA 6 cut(s) 218, 379, 505, 1349, 1379, 1627
MflI RGATCY 1 cut(s) 797
MhlI GDGCHC 3 cut(s) 87, 350, 1216
Mly113I GGCGCC 2 cut(s) 39, 464
MlyI GAGTC 4 cut(s) 203, 388, 449, 1970
MmeI TCCRAC 2 cut(s) 75, 1714
Mph1103I ATGCAT 1 cut(s) 1190
MroXI GAANNNNTTC 2 cut(s) 1356, 1551
MseI TTAA 7 cut(s) 503, 530, 1557, 1761, 1860, 1982, 1992
MspCI CTTAAG 2 cut(s) 1556, 1859
MspI CCGG 8 cut(s) 6, 24, 80, 88, 160, 190, 340, 1030
MspR9I CCNGG 5 cut(s) 6, 160, 161, 1030, 1031
MteI GCGCNGCGC 1 cut(s) 37
Mva1269I GAATGC 3 cut(s) 926, 998, 1283
MvnI CGCG 6 cut(s) 34, 36, 177, 302, 326, 356
NarI GGCGCC 2 cut(s) 39, 464
NciI CCSGG 5 cut(s) 6, 160, 161, 1030, 1031
NcoI CCATGG 2 cut(s) 1216, 2064
NdeII GATC 4 cut(s) 132, 297, 797, 1015
NlaIV GGNNCC 8 cut(s) 22, 40, 49, 69, 158, 310, 465, 519
NmeAIII GCCGAG 1 cut(s) 1876
NmuCI GTSAC 2 cut(s) 452, 1340
NruI TCGCGA 1 cut(s) 356
NsiI ATGCAT 1 cut(s) 1190
NspI RCATGY 3 cut(s) 889, 1168, 1192
NspV TTCGAA 1 cut(s) 662
PaeI GCATGC 2 cut(s) 889, 1192
PctI GAATGC 3 cut(s) 926, 998, 1283
PdmI GAANNNNTTC 2 cut(s) 1356, 1551
PfeI GAWTC 6 cut(s) 1242, 1513, 1727, 1799, 1910, 2146
Pfl23II CGTACG 1 cut(s) 303
PflFI GACNNNGTC 1 cut(s) 218
PflMI CCANNNNNTGG 2 cut(s) 153, 1381
PkrI GCNGC 5 cut(s) 38, 538, 1530, 1962, 1989
Ple19I CGATCG 1 cut(s) 135
PleI GAGTC 4 cut(s) 203, 387, 449, 1970
PluTI GGCGCC 2 cut(s) 42, 467
PpsI GAGTC 4 cut(s) 203, 387, 449, 1970
Psp124BI GAGCTC 2 cut(s) 87, 350
Psp1406I AACGTT 1 cut(s) 510
PspLI CGTACG 1 cut(s) 303
PspN4I GGNNCC 8 cut(s) 22, 40, 49, 69, 158, 310, 465, 519
PspPI GGNCC 4 cut(s) 67, 156, 1295, 2113
PsrI GAACNNNNNNTAC 2 cut(s) 1639, 1671
PstI CTGCAG 1 cut(s) 995
PsuI RGATCY 1 cut(s) 797
PsyI GACNNNGTC 1 cut(s) 218
PvuI CGATCG 1 cut(s) 135
RruI TCGCGA 1 cut(s) 356
RsaI GTAC 4 cut(s) 305, 425, 643, 1631
RsaNI GTAC 4 cut(s) 304, 424, 642, 1630
SacI GAGCTC 2 cut(s) 87, 350
SaqAI TTAA 7 cut(s) 503, 530, 1557, 1761, 1860, 1982, 1992
SatI GCNGC 5 cut(s) 37, 537, 1529, 1961, 1988
Sau3AI GATC 4 cut(s) 132, 297, 797, 1015
Sau96I GGNCC 4 cut(s) 67, 156, 1295, 2113
SchI GAGTC 4 cut(s) 203, 388, 449, 1970
ScrFI CCNGG 5 cut(s) 6, 160, 161, 1030, 1031
SduI GDGCHC 3 cut(s) 87, 350, 1216
SfaNI GCATC 2 cut(s) 271, 867
SfcI CTRYAG 4 cut(s) 991, 1361, 1673, 1905
SfoI GGCGCC 2 cut(s) 40, 465
SfuI TTCGAA 1 cut(s) 662
SinI GGWCC 2 cut(s) 67, 156
SmaI CCCGGG 2 cut(s) 161, 1031
SmlI CTYRAG 5 cut(s) 122, 1282, 1425, 1556, 1859
SmoI CTYRAG 5 cut(s) 122, 1282, 1425, 1556, 1859
SphI GCATGC 2 cut(s) 889, 1192
SsiI CCGC 8 cut(s) 36, 201, 231, 292, 536, 787, 1274, 2077
SspDI GGCGCC 2 cut(s) 38, 463
SspI AATATT 1 cut(s) 725
SspMI CTAG 3 cut(s) 1064, 1175, 1209
SstI GAGCTC 2 cut(s) 87, 350
StyD4I CCNGG 5 cut(s) 4, 158, 159, 1028, 1029
StyI CCWWGG 5 cut(s) 459, 1216, 1246, 1298, 2064
TaaI ACNGT 9 cut(s) 59, 198, 308, 499, 655, 827, 856, 1022, 1150
TaiI ACGT 3 cut(s) 222, 513, 2158
TaqI TCGA 8 cut(s) 222, 365, 399, 638, 662, 987, 1411, 2091
TaqII GACCGA 1 cut(s) 125
TatI WGTACW 2 cut(s) 423, 641
TauI GCSGC 2 cut(s) 39, 539
TfiI GAWTC 6 cut(s) 1242, 1513, 1727, 1799, 1910, 2146
Tru1I TTAA 7 cut(s) 503, 530, 1557, 1761, 1860, 1982, 1992
Tru9I TTAA 7 cut(s) 503, 530, 1557, 1761, 1860, 1982, 1992
TscAI CASTG 7 cut(s) 483, 753, 1000, 1078, 1155, 1339, 1897
TseFI GTSAC 2 cut(s) 452, 1340
TseI GCWGC 3 cut(s) 1528, 1960, 1987
Tsp45I GTSAC 2 cut(s) 452, 1340
TspDTI ATGAA 9 cut(s) 699, 1502, 1560, 1599, 1628, 1704, 1767, 1943, 2077
TspGWI ACGGA 2 cut(s) 301, 372
TspMI CCCGGG 2 cut(s) 159, 1029
TspRI CASTG 7 cut(s) 483, 753, 1000, 1078, 1155, 1339, 1897
Tth111I GACNNNGTC 1 cut(s) 218
Van91I CCANNNNNTGG 2 cut(s) 153, 1381
Vha464I CTTAAG 2 cut(s) 1556, 1859
VpaK11BI GGWCC 2 cut(s) 67, 156
XagI CCTNNNNNAGG 1 cut(s) 1862
XapI RAATTY 5 cut(s) 439, 1352, 1561, 1692, 1823
XceI RCATGY 3 cut(s) 889, 1168, 1192
XcmI CCANNNNNNNNNTGG 1 cut(s) 1640
XmaI CCCGGG 2 cut(s) 159, 1029
XmiI GTMKAC 1 cut(s) 631
XmnI GAANNNNTTC 2 cut(s) 1356, 1551
XspI CTAG 3 cut(s) 1064, 1175, 1209
ZraI GACGTC 1 cut(s) 220
Zsp2I ATGCAT 1 cut(s) 1190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.