Rh6CG475200

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0015152
Physical Location & Seq
Reverse (-)
64445113 .. 64451174
6062 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG475200.1

Sequence Viewer

Length: 1785 bp
ATGCCCGGCGTCGCATCAAACTCCGGCGAACGTTCTCTGGTCCCCTACTCGCCGGAGATCCCGCATCCCGTCGTACACTCTATTCACCACGGCCTCAAGCCTCCGATCGCTCGCCTCTCCATCTCGTGGTCCCGCGGCAATAAGCTGCGCGTGTCGGTTCTCCGTCCGCCGTCCGATGAAGACTCCGACGACGGCGAGGTCGGCGGGAAAGTAGTGGAGGTGAAGCTCAGCAATGGCGACGGCGAGAATAGCGACGCAACGTGGCGGAGGATCGCCTACGGCTCCGTTACCCCGTTCGCTCATCTCCAGAGCCGCCGGAGCACCATCGCCAACTTATCGAACATGTCACTCAGTCCATCGCCGTATAGCATCGATTGGTGGGAGTATGTGATGGAGTACAGCAAGGACATAAATTCACTCCTTGGTAGTCTCGATTCGGGTCCTGATCCGGTGATTGACGACCCGAAGATGGTTTTAAAGAGAACTGAGGAGCCTACCTCGATAAAAGCTGCTTGGGAGCTGATGGAGATATTTTATGCGGACAAGCAGTCTCAGCCATGGCAACTGGAACGGCTTGTTGATTGGTTGGCTGATTATGATAGCTTGCTCTCGAGTACTCATCCAACAGTCCATTCTAAACTTGTGGATTTCCAAAATGAACTTTCCAGCTTACAGGTTATTGAGGATGATCCTAAATATTGGGATGTGTTATCATCAGCACTCGCAGTTGGCTGGATTGATATTGTGGTGAAAATGTTACGCTTACATGGATCTTATCAACTCCATCAGCTTGGCAACCGTGAGACAGAAAATGGACTTGTAGAGGCAGTTGCTGTTCTTATTTCAACGAAGCCACGCATGCGTCCAGGAGTAGAAGATGGAAAGTTGGGTGAATGCTTTAAAGCAAAGCCTGATTTTATCAAGGCATGGGAGAATTGGAGAGCACAAATTACGAAGCTAGACTGCAGTGGATTCTGGCTTCAGTGTGATCACCATCAAACCCGGGAGGGATTGAAAAATATGATACAGGTTATGCTTGGAAACATTGACAGTCTCCGCAATGAAACTTGCCACTGGATAGAGCTGTTCATCTCTCACTTTCTATACGTCAGGCCATTAACAGTGGGTCTCGAAAGCATGTATGGTCTAGCCCAGAAATGCTTACAATTGAAACCAATGTTGGGTGCCCATAGGTTGATAGATATTATTCTTGGAATCCTTGGGGAAAATACTGAGGTTGTCTTGGCGGAATGCTCTAGAGCATTTGGGCCTTGGATGGTTGCCCATGCCATTGAGTTGTTGACTACTGGGAGTGATCACGCAGAAAGTCTTCTACATGAAGAGCGCTATAACTTGGGTGGAATTAGTATAGCAGAACTACATCGGCTTGTCTACGCTCAGGTTTTATCATCACATGCATTGACTTGGCAAATTGCTCCAATCTATTTGTCATCGTGCATGAAGCAGGGAATGGGTTTGTTAGAGATTCTATTGTCTAAGCTGCCTATTGAACATAATGAAACACTGCTTAAGAATATAGAGATCTGTCGTCTTTACGAACTTGATACTGTTAGTTCGAACGTTATGAAGCTGAAGCTGCTAAACTGGCAGGAGCGTCCTCTGCTAAATGTCTCTCAGACAGACCTCTTGCTCAATAAACTGCAAGAGTTGTCCATGGCTAAGCTCCGTCCAGACTTTATTGAAGCAGACTTGCCATCAGAGGCCCTGAGTTGTGTGAGGTTGGCTCTTGCTTCAAATCTTGGACGTGCCATCTTGGAGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
Nucleopor_Nup85

Protein Analysis

594

Amino Acids

66.8

Weight (kDa)

5.49

Isoelectric Point (pI)

46.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nucleopor_Nup85 PF07575 81 - 530 3.2e-98 Nup85 Nucleoporin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015152)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G32910
fragaria_vesca FvH4_2g35520
malus_domestica MD15G1093200.v1.1
prunus_persica Prupe.1G448000_v2.0.a1
pyrus_communis pycom15g08600
rosa_chinensis RchiOBHm_Chr6g0306261
rosa_laevigata RLG00000010809
rosa_multiflora Rmu_sc0017002.1_g000002 Rmu_sc0037804.1_g000002
rosa_roxburghii Rroxscaffold_7G00161900
rosa_rugosa Rorug06G0348400
rosa_samantha Rh6AG460900 Rh6BG440100 Rh6CG475200 Rh6DG461500
rosa_wichuraiana Rw6G040160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 197
AccB1I GGYRCC 1 cut(s) 1184
AccB7I CCANNNNNTGG 1 cut(s) 126
AccI GTMKAC 1 cut(s) 1392
AccII CGCG 2 cut(s) 135, 150
AclI AACGTT 2 cut(s) 31, 1581
AclWI GGATC 5 cut(s) 52, 278, 440, 683, 778
AcsI RAATTY 1 cut(s) 412
AcuI CTGAAG 2 cut(s) 965, 1613
AcyI GRCGYC 1 cut(s) 9
AfaI GTAC 3 cut(s) 75, 398, 616
AfeI AGCGCT 1 cut(s) 1346
AfiI CCNNNNNNNGG 3 cut(s) 126, 469, 1181
AflII CTTAAG 1 cut(s) 1529
AflIII ACRYGT 1 cut(s) 342
AgsI TTSAA 6 cut(s) 846, 1015, 1171, 1511, 1703, 1755
AhdI GACNNNNNGTC 1 cut(s) 547
AjiI CACGTC 1 cut(s) 1766
AjnI CCWGG 1 cut(s) 865
AjuI GAANNNNNNNTTGG 4 cut(s) 616, 648, 1163, 1195
Alw21I GWGCWC 2 cut(s) 323, 946
Alw26I GTCTC 6 cut(s) 434, 555, 797, 1058, 1133, 1636
AlwI GGATC 5 cut(s) 52, 278, 440, 683, 778
AlwNI CAGNNNCTG 1 cut(s) 833
Ama87I CYCGRG 2 cut(s) 610, 1002
Aor51HI AGCGCT 1 cut(s) 1346
AoxI GGCC 4 cut(s) 91, 1112, 1268, 1722
ApeKI GCWGC 4 cut(s) 145, 509, 1501, 1597
ApoI RAATTY 1 cut(s) 412
Asp700I GAANNNNTTC 1 cut(s) 1329
AspLEI GCGC 2 cut(s) 150, 1347
AspS9I GGNCC 5 cut(s) 40, 129, 440, 1268, 1723
AsuC2I CCSGG 3 cut(s) 6, 1003, 1004
AsuHPI GGTGA 6 cut(s) 77, 232, 463, 760, 902, 983
AsuII TTCGAA 1 cut(s) 1577
AvaI CYCGRG 2 cut(s) 610, 1002
AvaII GGWCC 3 cut(s) 40, 129, 440
BaeGI GKGCMC 1 cut(s) 1189
BanI GGYRCC 1 cut(s) 1184
BauI CACGAG 1 cut(s) 124
BbsI GAAGAC 2 cut(s) 186, 1322
Bbv12I GWGCWC 2 cut(s) 323, 946
BbvI GCAGC 4 cut(s) 132, 496, 1488, 1584
BceAI ACGGC 7 cut(s) 106, 154, 208, 256, 295, 346, 587
BciT130I CCWGG 1 cut(s) 867
BclI TGATCA 2 cut(s) 988, 1315
BcnI CCSGG 3 cut(s) 6, 1003, 1004
BcoDI GTCTC 6 cut(s) 434, 555, 797, 1058, 1133, 1636
BfaI CTAG 3 cut(s) 959, 1148, 1257
BfmI CTRYAG 1 cut(s) 964
BfoI RGCGCY 1 cut(s) 1348
BfrI CTTAAG 1 cut(s) 1529
BglII AGATCT 1 cut(s) 1542
BisI GCNGC 6 cut(s) 136, 146, 313, 510, 1502, 1598
BlpI GCTNAGC 2 cut(s) 227, 1680
BlsI GCNGC 6 cut(s) 137, 147, 314, 511, 1503, 1599
BmcAI AGTACT 1 cut(s) 616
Bme1390I CCNGG 4 cut(s) 6, 867, 1003, 1004
Bme18I GGWCC 3 cut(s) 40, 129, 440
BmeRI GACNNNNNGTC 1 cut(s) 547
BmeT110I CYCGRG 2 cut(s) 610, 1002
BmgBI CACGTC 1 cut(s) 1766
BmgT120I GGNCC 5 cut(s) 40, 129, 440, 1268, 1723
BmiI GGNNCC 6 cut(s) 42, 131, 283, 441, 492, 1186
BmrFI CCNGG 4 cut(s) 6, 867, 1003, 1004
BmrI ACTGGG 1 cut(s) 1317
BmsI GCATC 3 cut(s) 23, 73, 378
BmuI ACTGGG 1 cut(s) 1317
BpiI GAAGAC 2 cut(s) 186, 1322
BplI GAGNNNNNCTC 4 cut(s) 482, 514, 1729, 1761
BpmI CTGGAG 1 cut(s) 290
Bpu10I CCTNAGC 1 cut(s) 1398
Bpu1102I GCTNAGC 2 cut(s) 227, 1680
Bpu14I TTCGAA 1 cut(s) 1577
BpuEI CTTGAG 1 cut(s) 80
BpuMI CCSGG 3 cut(s) 6, 1003, 1004
Bsa29I ATCGAT 1 cut(s) 372
BsaBI GATNNNNATC 1 cut(s) 993
BsaHI GRCGYC 1 cut(s) 9
BsaI GGTCTC 1 cut(s) 1133
BsaJI CCNNGG 8 cut(s) 88, 133, 421, 557, 1002, 1219, 1271, 1674
BsaWI WCCGGW 1 cut(s) 448
Bsc4I CCNNNNNNNGG 3 cut(s) 126, 469, 1181
Bse1I ACTGG 4 cut(s) 570, 1079, 1312, 1610
Bse3DI GCAATG 2 cut(s) 238, 1066
Bse8I GATNNNNATC 1 cut(s) 993
BseBI CCWGG 1 cut(s) 867
BseCI ATCGAT 1 cut(s) 372
BseDI CCNNGG 8 cut(s) 88, 133, 421, 557, 1002, 1219, 1271, 1674
BseGI GGATG 5 cut(s) 64, 619, 691, 709, 1281
BseJI GATNNNNATC 1 cut(s) 993
BseLI CCNNNNNNNGG 3 cut(s) 126, 469, 1181
BseMI GCAATG 2 cut(s) 238, 1066
BseMII CTCAG 8 cut(s) 241, 364, 477, 566, 1224, 1412, 1649, 1718
BseNI ACTGG 4 cut(s) 570, 1079, 1312, 1610
BseRI GAGGAG 1 cut(s) 503
BseSI GKGCMC 1 cut(s) 1189
BseXI GCAGC 4 cut(s) 132, 496, 1488, 1584
Bsh1236I CGCG 2 cut(s) 135, 150
Bsh1285I CGRYCG 1 cut(s) 108
BshFI GGCC 4 cut(s) 93, 1114, 1270, 1724
BshNI GGYRCC 1 cut(s) 1184
BshVI ATCGAT 1 cut(s) 372
BsiEI CGRYCG 1 cut(s) 108
BsiHKAI GWGCWC 2 cut(s) 323, 946
BsiHKCI CYCGRG 2 cut(s) 610, 1002
BsiSI CCGG 6 cut(s) 6, 24, 53, 316, 449, 1003
BslFI GGGAC 2 cut(s) 26, 115
BslI CCNNNNNNNGG 3 cut(s) 126, 469, 1181
BsmAI GTCTC 6 cut(s) 434, 555, 797, 1058, 1133, 1636
BsmFI GGGAC 2 cut(s) 26, 115
BsmI GAATGC 2 cut(s) 899, 1256
BsnI GGCC 4 cut(s) 93, 1114, 1270, 1724
Bso31I GGTCTC 1 cut(s) 1133
BsoBI CYCGRG 2 cut(s) 610, 1002
Bsp119I TTCGAA 1 cut(s) 1577
Bsp1286I GDGCHC 3 cut(s) 323, 946, 1189
Bsp143I GATC 9 cut(s) 57, 105, 270, 445, 688, 770, 988, 1315, 1542
Bsp1720I GCTNAGC 2 cut(s) 227, 1680
Bsp19I CCATGG 2 cut(s) 557, 1674
BspANI GGCC 4 cut(s) 93, 1114, 1270, 1724
BspCNI CTCAG 8 cut(s) 240, 363, 478, 565, 1225, 1411, 1648, 1719
BspDI ATCGAT 1 cut(s) 372
BspFNI CGCG 2 cut(s) 135, 150
BspLI GGNNCC 6 cut(s) 42, 131, 283, 441, 492, 1186
BspMAI CTGCAG 1 cut(s) 968
BspPI GGATC 5 cut(s) 52, 278, 440, 683, 778
BspQI GCTCTTC 1 cut(s) 1335
BspT104I TTCGAA 1 cut(s) 1577
BspT107I GGYRCC 1 cut(s) 1184
BspTI CTTAAG 1 cut(s) 1529
BspTNI GGTCTC 1 cut(s) 1133
BsrDI GCAATG 2 cut(s) 238, 1066
BsrI ACTGG 4 cut(s) 570, 1079, 1312, 1610
BssECI CCNNGG 8 cut(s) 88, 133, 421, 557, 1002, 1219, 1271, 1674
BssMI GATC 9 cut(s) 57, 105, 270, 445, 688, 770, 988, 1315, 1542
BssNI GRCGYC 1 cut(s) 9
BssSI CACGAG 1 cut(s) 124
BssT1I CCWWGG 5 cut(s) 421, 557, 1219, 1271, 1674
Bst2BI CACGAG 1 cut(s) 124
Bst2UI CCWGG 1 cut(s) 867
Bst4CI ACNGT 5 cut(s) 628, 800, 1052, 1123, 1570
Bst6I CTCTTC 1 cut(s) 1335
BstACI GRCGYC 1 cut(s) 9
BstAFI CTTAAG 1 cut(s) 1529
BstBI TTCGAA 1 cut(s) 1577
BstC8I GCNNGC 3 cut(s) 112, 605, 860
BstDSI CCRYGG 4 cut(s) 88, 133, 557, 1674
BstF5I GGATG 5 cut(s) 64, 619, 691, 709, 1281
BstFNI CGCG 2 cut(s) 135, 150
BstH2I RGCGCY 1 cut(s) 1348
BstHHI GCGC 2 cut(s) 150, 1347
BstKTI GATC 9 cut(s) 60, 108, 273, 448, 691, 773, 991, 1318, 1545
BstMAI GTCTC 6 cut(s) 434, 555, 797, 1058, 1133, 1636
BstMBI GATC 9 cut(s) 57, 105, 270, 445, 688, 770, 988, 1315, 1542
BstMCI CGRYCG 1 cut(s) 108
BstMWI GCNNNNNNNGC 8 cut(s) 201, 249, 318, 553, 859, 1597, 1606, 1621
BstNI CCWGG 1 cut(s) 867
BstNSI RCATGY 4 cut(s) 346, 862, 1141, 1418
BstSCI CCNGG 4 cut(s) 4, 865, 1001, 1002
BstSFI CTRYAG 1 cut(s) 964
BstSLI GKGCMC 1 cut(s) 1189
BstUI CGCG 2 cut(s) 135, 150
BstV1I GCAGC 4 cut(s) 132, 496, 1488, 1584
BstV2I GAAGAC 2 cut(s) 186, 1322
BstX2I RGATCY 3 cut(s) 57, 770, 1542
BstXI CCANNNNNNTGG 1 cut(s) 791
BstYI RGATCY 3 cut(s) 57, 770, 1542
Bsu15I ATCGAT 1 cut(s) 372
BsuRI GGCC 4 cut(s) 93, 1114, 1270, 1724
BsuTUI ATCGAT 1 cut(s) 372
BtgI CCRYGG 4 cut(s) 88, 133, 557, 1674
BtgZI GCGATG 2 cut(s) 310, 342
BtrI CACGTC 1 cut(s) 1766
BtsCI GGATG 5 cut(s) 64, 619, 691, 709, 1281
BtsI GCAGTG 2 cut(s) 973, 1523
BtsIMutI CAGTG 5 cut(s) 973, 989, 1072, 1128, 1523
Cac8I GCNNGC 3 cut(s) 112, 605, 860
CaiI CAGNNNCTG 1 cut(s) 833
CfoI GCGC 2 cut(s) 150, 1347
Cfr13I GGNCC 5 cut(s) 40, 129, 440, 1268, 1723
Cfr42I CCGCGG 1 cut(s) 136
Cfr9I CCCGGG 1 cut(s) 1002
ClaI ATCGAT 1 cut(s) 372
CseI GACGC 3 cut(s) 263, 851, 1604
Csp6I GTAC 3 cut(s) 74, 397, 615
CviQI GTAC 3 cut(s) 74, 397, 615
DpnI GATC 9 cut(s) 59, 107, 272, 447, 690, 772, 990, 1317, 1544
DpnII GATC 9 cut(s) 57, 105, 270, 445, 688, 770, 988, 1315, 1542
DraI TTTAAA 2 cut(s) 477, 901
DrdI GACNNNNNNGTC 1 cut(s) 197
DriI GACNNNNNGTC 1 cut(s) 547
DseDI GACNNNNNNGTC 1 cut(s) 197
Eam1104I CTCTTC 1 cut(s) 1335
Eam1105I GACNNNNNGTC 1 cut(s) 547
EarI CTCTTC 1 cut(s) 1335
EciI GGCGGA 3 cut(s) 156, 280, 1262
Eco130I CCWWGG 5 cut(s) 421, 557, 1219, 1271, 1674
Eco31I GGTCTC 1 cut(s) 1133
Eco47I GGWCC 3 cut(s) 40, 129, 440
Eco47III AGCGCT 1 cut(s) 1346
Eco57I CTGAAG 2 cut(s) 965, 1613
Eco88I CYCGRG 2 cut(s) 610, 1002
EcoO109I RGGNCCY 2 cut(s) 440, 1723
EcoRII CCWGG 1 cut(s) 865
EcoT14I CCWWGG 5 cut(s) 421, 557, 1219, 1271, 1674
EcoT22I ATGCAT 1 cut(s) 1420
ErhI CCWWGG 5 cut(s) 421, 557, 1219, 1271, 1674
FaqI GGGAC 2 cut(s) 26, 115
FauI CCCGC 3 cut(s) 69, 140, 197
FbaI TGATCA 2 cut(s) 988, 1315
FblI GTMKAC 1 cut(s) 1392
Fnu4HI GCNGC 6 cut(s) 136, 146, 313, 510, 1502, 1598
FokI GGATG 5 cut(s) 51, 606, 698, 716, 1288
Fsp4HI GCNGC 6 cut(s) 136, 146, 313, 510, 1502, 1598
FspBI CTAG 3 cut(s) 959, 1148, 1257
GlaI GCGC 2 cut(s) 149, 1346
GluI GCNGC 6 cut(s) 136, 146, 313, 510, 1502, 1598
GsuI CTGGAG 1 cut(s) 290
HaeII RGCGCY 1 cut(s) 1348
HaeIII GGCC 4 cut(s) 93, 1114, 1270, 1724
HapII CCGG 6 cut(s) 6, 24, 53, 316, 449, 1003
HgaI GACGC 3 cut(s) 263, 851, 1604
HhaI GCGC 2 cut(s) 150, 1347
Hin1I GRCGYC 1 cut(s) 9
Hin6I GCGC 2 cut(s) 148, 1345
HinP1I GCGC 2 cut(s) 148, 1345
HincII GTYRAC 1 cut(s) 1302
HindII GTYRAC 1 cut(s) 1302
HinfI GANTC 5 cut(s) 182, 434, 972, 1215, 1486
HpaII CCGG 6 cut(s) 6, 24, 53, 316, 449, 1003
HphI GGTGA 6 cut(s) 77, 232, 463, 760, 902, 983
Hpy166II GTNNAC 3 cut(s) 76, 1302, 1393
Hpy188I TCNGA 5 cut(s) 105, 175, 187, 1638, 1720
Hpy188III TCNNGA 7 cut(s) 307, 431, 443, 610, 1130, 1257, 1691
Hpy8I GTNNAC 3 cut(s) 76, 1302, 1393
Hpy99I CGWCG 6 cut(s) 14, 74, 191, 194, 242, 257
HpyCH4III ACNGT 5 cut(s) 628, 800, 1052, 1123, 1570
HpyCH4IV ACGT 5 cut(s) 31, 260, 1107, 1581, 1765
HpyCH4V TGCA 4 cut(s) 966, 1418, 1458, 1663
HpyF10VI GCNNNNNNNGC 8 cut(s) 201, 249, 318, 553, 859, 1597, 1606, 1621
HpySE526I ACGT 5 cut(s) 31, 260, 1107, 1581, 1765
Hsp92I GRCGYC 1 cut(s) 9
HspAI GCGC 2 cut(s) 148, 1345
Ksp22I TGATCA 2 cut(s) 988, 1315
KspI CCGCGG 1 cut(s) 136
Kzo9I GATC 9 cut(s) 57, 105, 270, 445, 688, 770, 988, 1315, 1542
LguI GCTCTTC 1 cut(s) 1335
LmnI GCTCC 7 cut(s) 287, 318, 490, 517, 1441, 1612, 1689
Lsp1109I GCAGC 4 cut(s) 132, 496, 1488, 1584
LweI GCATC 3 cut(s) 23, 73, 378
MaeI CTAG 3 cut(s) 959, 1148, 1257
MaeII ACGT 5 cut(s) 31, 260, 1107, 1581, 1765
MaeIII GTNAC 3 cut(s) 286, 345, 756
MalI GATC 9 cut(s) 59, 107, 272, 447, 690, 772, 990, 1317, 1544
MboI GATC 9 cut(s) 57, 105, 270, 445, 688, 770, 988, 1315, 1542
MboII GAAGA 5 cut(s) 191, 478, 887, 1322, 1352
MfeI CAATTG 1 cut(s) 1166
MflI RGATCY 3 cut(s) 57, 770, 1542
MhlI GDGCHC 3 cut(s) 323, 946, 1189
MluCI AATT 6 cut(s) 412, 934, 948, 1166, 1362, 1431
MlyI GAGTC 1 cut(s) 176
MmeI TCCRAC 2 cut(s) 210, 647
Mph1103I ATGCAT 1 cut(s) 1420
MroXI GAANNNNTTC 1 cut(s) 1329
MseI TTAA 4 cut(s) 476, 900, 1118, 1530
MspA1I CMGCKG 1 cut(s) 135
MspCI CTTAAG 1 cut(s) 1529
MspI CCGG 6 cut(s) 6, 24, 53, 316, 449, 1003
MspR9I CCNGG 4 cut(s) 6, 867, 1003, 1004
MunI CAATTG 1 cut(s) 1166
Mva1269I GAATGC 2 cut(s) 899, 1256
MvaI CCWGG 1 cut(s) 867
MvnI CGCG 2 cut(s) 135, 150
MwoI GCNNNNNNNGC 8 cut(s) 201, 249, 318, 553, 859, 1597, 1606, 1621
NciI CCSGG 3 cut(s) 6, 1003, 1004
NcoI CCATGG 2 cut(s) 557, 1674
NdeII GATC 9 cut(s) 57, 105, 270, 445, 688, 770, 988, 1315, 1542
NlaIV GGNNCC 6 cut(s) 42, 131, 283, 441, 492, 1186
NmuCI GTSAC 1 cut(s) 345
NsiI ATGCAT 1 cut(s) 1420
NspI RCATGY 4 cut(s) 346, 862, 1141, 1418
NspV TTCGAA 1 cut(s) 1577
PaeI GCATGC 1 cut(s) 862
PaeR7I CTCGAG 1 cut(s) 610
PciI ACATGT 1 cut(s) 342
PciSI GCTCTTC 1 cut(s) 1335
PctI GAATGC 2 cut(s) 899, 1256
PdmI GAANNNNTTC 1 cut(s) 1329
PfeI GAWTC 4 cut(s) 434, 972, 1215, 1486
PflMI CCANNNNNTGG 1 cut(s) 126
PfoI TCCNGGA 1 cut(s) 865
PkrI GCNGC 6 cut(s) 137, 147, 314, 511, 1503, 1599
Ple19I CGATCG 1 cut(s) 108
PleI GAGTC 1 cut(s) 176
PpsI GAGTC 1 cut(s) 176
PpuMI RGGWCCY 1 cut(s) 440
PscI ACATGT 1 cut(s) 342
Psp1406I AACGTT 2 cut(s) 31, 1581
Psp5II RGGWCCY 1 cut(s) 440
Psp6I CCWGG 1 cut(s) 865
PspGI CCWGG 1 cut(s) 865
PspN4I GGNNCC 6 cut(s) 42, 131, 283, 441, 492, 1186
PspPI GGNCC 5 cut(s) 40, 129, 440, 1268, 1723
PspPPI RGGWCCY 1 cut(s) 440
PstI CTGCAG 1 cut(s) 968
PstNI CAGNNNCTG 1 cut(s) 833
PsuI RGATCY 3 cut(s) 57, 770, 1542
PvuI CGATCG 1 cut(s) 108
RsaI GTAC 3 cut(s) 75, 398, 616
RsaNI GTAC 3 cut(s) 74, 397, 615
SacII CCGCGG 1 cut(s) 136
SapI GCTCTTC 1 cut(s) 1335
SaqAI TTAA 4 cut(s) 476, 900, 1118, 1530
SatI GCNGC 6 cut(s) 136, 146, 313, 510, 1502, 1598
Sau3AI GATC 9 cut(s) 57, 105, 270, 445, 688, 770, 988, 1315, 1542
Sau96I GGNCC 5 cut(s) 40, 129, 440, 1268, 1723
ScaI AGTACT 1 cut(s) 616
SchI GAGTC 1 cut(s) 176
ScrFI CCNGG 4 cut(s) 6, 867, 1003, 1004
SduI GDGCHC 3 cut(s) 323, 946, 1189
SfaNI GCATC 3 cut(s) 23, 73, 378
SfcI CTRYAG 1 cut(s) 964
Sfr274I CTCGAG 1 cut(s) 610
Sfr303I CCGCGG 1 cut(s) 136
SfuI TTCGAA 1 cut(s) 1577
SgrBI CCGCGG 1 cut(s) 136
SinI GGWCC 3 cut(s) 40, 129, 440
SlaI CTCGAG 1 cut(s) 610
SmaI CCCGGG 1 cut(s) 1004
SmlI CTYRAG 3 cut(s) 95, 610, 1529
SmoI CTYRAG 3 cut(s) 95, 610, 1529
SphI GCATGC 1 cut(s) 862
Sse9I AATT 6 cut(s) 412, 934, 948, 1166, 1362, 1431
SspI AATATT 1 cut(s) 698
SspMI CTAG 3 cut(s) 959, 1148, 1257
StyD4I CCNGG 4 cut(s) 4, 865, 1001, 1002
StyI CCWWGG 5 cut(s) 421, 557, 1219, 1271, 1674
TaaI ACNGT 5 cut(s) 628, 800, 1052, 1123, 1570
TaiI ACGT 5 cut(s) 34, 263, 1110, 1584, 1768
TaqI TCGA 7 cut(s) 338, 372, 432, 500, 611, 1131, 1577
TasI AATT 6 cut(s) 412, 934, 948, 1166, 1362, 1431
TatI WGTACW 2 cut(s) 396, 614
TauI GCSGC 2 cut(s) 138, 315
TfiI GAWTC 4 cut(s) 434, 972, 1215, 1486
Tru1I TTAA 4 cut(s) 476, 900, 1118, 1530
Tru9I TTAA 4 cut(s) 476, 900, 1118, 1530
TscAI CASTG 5 cut(s) 973, 989, 1079, 1128, 1530
TseFI GTSAC 1 cut(s) 345
TseI GCWGC 4 cut(s) 145, 509, 1501, 1597
Tsp45I GTSAC 1 cut(s) 345
TspDTI ATGAA 8 cut(s) 192, 672, 1077, 1078, 1353, 1475, 1533, 1601
TspGWI ACGGA 3 cut(s) 152, 274, 1676
TspMI CCCGGG 1 cut(s) 1002
TspRI CASTG 5 cut(s) 973, 989, 1079, 1128, 1530
Van91I CCANNNNNTGG 1 cut(s) 126
Vha464I CTTAAG 1 cut(s) 1529
VpaK11BI GGWCC 3 cut(s) 40, 129, 440
XapI RAATTY 1 cut(s) 412
XbaI TCTAGA 1 cut(s) 1256
XceI RCATGY 4 cut(s) 346, 862, 1141, 1418
XhoI CTCGAG 1 cut(s) 610
XmaI CCCGGG 1 cut(s) 1002
XmiI GTMKAC 1 cut(s) 1392
XmnI GAANNNNTTC 1 cut(s) 1329
XspI CTAG 3 cut(s) 959, 1148, 1257
ZrmI AGTACT 1 cut(s) 616
Zsp2I ATGCAT 1 cut(s) 1420
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.