Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003979

Physical Location & Seq

Genomic Coordinates Forward (+)

16789531 .. 16793685

Gene Structure 4155 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G35290.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2739 bp

ATGTTTTGGGTTTTGGTTCTGTTGAGCTTCATTGTTCTTATTGGTGATGGGATGATTTCAGAGGGAGCTGGTTTAAGGCCTCGTTATGTTGATGTTGGAGCAATATTCAGTTTAGGGACTTTACAGGGTGAAGTTACAAATATTGCTATGAAAGCTGCAGAGGAAGATGTAAATTCTGATCCTAGCTTCCTTGGTGGATCAAAATTGCGTATAACGACGTATGATGCAAAGCGTAATGGATTCCTCACCATCATGGGAGCTTTGCAATTCATGGAGACTGATGCTGTGGCTATCATTGGTCCTCAGACATCAATAATGGCTCATGTACTGTCTCATCTTGCAAATGAGCTTAGTGTGCCTATGTTGTCATTCACAGCTTTAGACCCTAGTCTCTCGGCGCTTCAGTTCCCGTTCTTTGTCCAGACAGCACCTAGTGATCTCTTTCTGATGCGTGCCATTGCGGAAATGATAAGTTACTACGGTTGGTCAGAGGTGATTGCATTGTATAATGATGATGACAACAGTAGAAACGGTATAACAGCTTTAGGCGATGAGCTCGAAGGAAGGCGCTGCAAGATTTCATACAAGGCTGTGCTTCCTTTGGATGTGGTGATTACGAGTCCTCGTGAGATTATAAATGAGTTGGTTAAGATTCAAGGGATGGAATCTCGGGTAATCATTGTGAACACTTTCCCTAAAACAGGTAAGAAAATCTTTGAGGAAGCCCAGAAGCTTGGCATGATGGAGAAAGGCTATGTTTGGATAGCTACAACTTGGTTGACTTCTCTGTTAGATTCTGTTAACCCGTTACCTGCCAAGACTGCTGAATCTCTTAGAGGCGTGCTTACTCTTCGTATTCACACGCCAAATTCAAAAAAGAAAAAAGATTTCGTGGCACGGTGGAACAAGTTGAGTAACGGGACTGTCGGTTTAAACGTTTATGGTCTCTATGCTTATGATACTGTCTGGATCATTGCTCGAGCTGTTAAGAGACTTCTAGATAGCAGAGCTAACATTTCCTTCTCTAGTGACCCAAAGTTAACCAGCATGAAGGGAGGAGGGTCACTGAATCTAGGTGCATTGAGCATATTTGACCAAGGATCACAATTTCTTGATTATATTGTGAATACAAATATGACTGGTGTTACAGGTCAAATACAGTTTCTTCCTGACAGATCAATGATACAGCCCTCATATGACATCATAAACGTGGTTGATGACGGGTTTAGGCAGATAGGGTATTGGTCTAACCATTCCGGGCTCTCTATTATACCTCCAGAGTCACTATACAAAAAGCTTTCAAATCGTTCGAGCTCAAACCAACATCTGAACAATGTGACTTGGCCTGGTGGGACTTCTGAGACACCACGTGGTTGGGTTTTTCCTAACAACGGGAGACGATTGAGAATCGGTGTACCCGATAGAGCAAGTTTTAAGGAGTTTGTGTCAAGGTTGGATGGAAGCAACAAAGTGCAAGGGTATGCCATTGATGTCTTTGAAGCTGCGGTAAAACTGATTTCTTATCCGGTTCCTCATGAGTTCGTCCTATTTGGAGACGGTCTCAAGAACCCAAACTTCAATGAATTTGTCAACAATGTCACTATTGGGGTATTTGATGCTGTTGTAGGAGACATAGCTATTGTTACGAAACGAACAAGGATTGTGGATTTCACTCAGCCTTACATAGAATCAGGGCTTGTCGTGGTTGCTCCTGTCACAAAGCTAAATGATACTCCGTGGGCGTTTTTACGCCCTTTTACACCTCCAATGTGGGCTGTTACAGCAGCTTTTTTCCTCATCGTTGGATCAGTAATATGGATTCTTGAACATAGAATCAACGATGAGTTCCGCGGACCTCCAAGGAAACAAATTGTTACTATTCTCTGGTTCAGCTTCTCCACGATGTTTTTCTCCCACAGAGAGAACACAGTGAGTACACTCGGTCGTGCTGTTCTGCTCATCTGGCTATTTGTGGTACTAATCATAACATCAAGCTACACAGCGAGTCTTACATCGATTCTTACAGTGCAACAGCTAAACTCACCAATCAGAGGAGTAGACACACTCATCAGCAGCAGTGGACGAGTTGGGTTTCAGGTAGGTTCTTATGCAGAAAACTACATGATTGATGAGCTTAACATTGCCAGATCCAGACTTGTACCACTCGGCTCTCCTAAAGAATACGCTGCAGCTCTTCAAAACGGAACTGTTGCTGCAATTGTTGATGAGCGTCCTTACGTTGATCTCTTCCTCTCAGAATTCTGCGGATTTGCCATTAGAGGCCAAGAATTCACCAGAAGTGGCTGGGGATTTGCATTTCCAAGAGACTCTCCATTAGCAATCGACATGTCAACCGCGATCTTAGGTCTATCAGAAACCGGACAGCTTCAAAAGATCCATGACAAGTGGCTTTCAAGATCTAACTGCAGTAACCTCAACGGTTCAGTGTCAGATGAAGATTCAGAACAGCTTAAACTCCGAAGCTTCTGGGGATTATTCCTTGTGTGTGGGATCTCTTGTTTTATCGCTCTCTTCATCTACTTCTTCAAGATAGTCCGCGACTTCTTCCGCCACGGCAAATATGATGAAGAAGCCACAGTACCTTCACCAGAAAGTTCACGTTCTAAATCATTGCAGACATTTCTAGCTTATTTTGATGAAAAAGAAGACGAATCCAAGAGAAGGATGAAGCGTAAACGAAACGATGATCTTTCTTTAAAGCCTTCTAGACCAATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

912

Amino Acids

101.66

Weight (kDa)

8.03

Isoelectric Point (pI)

37.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	43 - 332	1.4e-12	Periplasmic binding protein
ANF_receptor	PF01094	47 - 406	6.4e-98	Receptor family ligand binding region
SBP_bac_3	PF00497	476 - 571	5.6e-06	Bacterial extracellular solute-binding proteins, family 3
Lig_chan-Glu_bd	PF10613	484 - 570	9.1e-07	Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan	PF00060	590 - 692	3.5e-31	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003979)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17260 AT4G35290 AT4G35290 AT4G35290 AT4G35290 AT4G35290 AT4G35290
fragaria_vesca	FvH4_2g16810 FvH4_2g16810 FvH4_2g16810 FvH4_2g16810 FvH4_2g16810 FvH4_2g16810 FvH4_2g16810 FvH4_2g16810 FvH4_2g16810
malus_domestica	MD05G1139700.v1.1 MD10G1141900.v1.1
prunus_persica	Prupe.8G180400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0280931
rosa_laevigata	RLG00000013015
rosa_multiflora	Rmu_ssc0000288.1_g000001
rosa_roxburghii	Rroxscaffold_7G00187480
rosa_rugosa	Rorug06G0136800 Rorug06G0136900 Rorug06G0137000 Rorug06G0137000 Rorug06G0137000
rosa_samantha	Rh6AG249300 Rh6CG252000 Rh6DG243800
rosa_wichuraiana	Rw6G005260 Rw6G021570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	635
Acc36I	ACCTGC	1 cut(s)	820
AccI	GTMKAC	1 cut(s)	2058
AccII	CGCG	3 cut(s)	1851, 2357, 2559
AciI	CCGC	8 cut(s)	461, 1505, 1849, 1851, 2265, 2355, 2557, 2569
AclI	AACGTT	1 cut(s)	936
AclWI	GGATC	8 cut(s)	173, 205, 977, 1108, 1813, 2142, 2389, 2519
AcsI	RAATTY	5 cut(s)	172, 868, 1583, 2258, 2288
AcuI	CTGAAG	1 cut(s)	386
AcvI	CACGTG	1 cut(s)	1370
AdeI	CACNNNGTG	2 cut(s)	434, 1370
AfaI	GTAC	6 cut(s)	327, 1416, 1936, 1977, 2160, 2601
AfiI	CCNNNNNNNGG	4 cut(s)	701, 1391, 2051, 2682
AflIII	ACRYGT	1 cut(s)	2346
AjnI	CCWGG	1 cut(s)	1345
Alw21I	GWGCWC	2 cut(s)	558, 1316
AlwI	GGATC	8 cut(s)	173, 205, 977, 1108, 1813, 2142, 2389, 2519
Ama87I	CYCGRG	2 cut(s)	669, 978
AoxI	GGCC	3 cut(s)	77, 1343, 2281
ApeKI	GCWGC	8 cut(s)	155, 570, 1502, 1784, 2073, 2186, 2189, 2213
ApoI	RAATTY	5 cut(s)	172, 868, 1583, 2258, 2288
Asp700I	GAANNNNTTC	1 cut(s)	689
AspLEI	GCGC	2 cut(s)	400, 570
AspS9I	GGNCC	2 cut(s)	299, 1853
AsuC2I	CCSGG	1 cut(s)	1258
AsuHPI	GGTGA	8 cut(s)	56, 140, 238, 505, 622, 2034, 2284, 2598
AvaI	CYCGRG	2 cut(s)	669, 978
AvaII	GGWCC	2 cut(s)	299, 1853
BanII	GRGCYC	3 cut(s)	558, 1263, 1316
BarI	GAAGNNNNNNTAC	2 cut(s)	2583, 2615
BauI	CACGAG	1 cut(s)	624
BbrPI	CACGTG	1 cut(s)	1370
BbsI	GAAGAC	1 cut(s)	2673
Bbv12I	GWGCWC	2 cut(s)	558, 1316
BbvI	GCAGC	8 cut(s)	142, 557, 1489, 1796, 2085, 2173, 2200, 2201
BccI	CCATC	5 cut(s)	41, 257, 655, 736, 1451
BceAI	ACGGC	1 cut(s)	2590
BciT130I	CCWGG	1 cut(s)	1347
BcnI	CCSGG	1 cut(s)	1258
BfaI	CTAG	8 cut(s)	183, 387, 432, 998, 1026, 1073, 2645, 2727
BfmI	CTRYAG	3 cut(s)	156, 2187, 2425
BfoI	RGCGCY	2 cut(s)	401, 571
BfuAI	ACCTGC	1 cut(s)	820
BglII	AGATCT	1 cut(s)	2417
BisI	GCNGC	8 cut(s)	156, 571, 1503, 1785, 2074, 2187, 2190, 2214
BlsI	GCNGC	8 cut(s)	157, 572, 1504, 1786, 2075, 2188, 2191, 2215
Bme1390I	CCNGG	2 cut(s)	1258, 1347
Bme18I	GGWCC	2 cut(s)	299, 1853
BmeT110I	CYCGRG	2 cut(s)	669, 978
BmgT120I	GGNCC	2 cut(s)	299, 1853
BmiI	GGNNCC	1 cut(s)	1530
BmrFI	CCNGG	2 cut(s)	1258, 1347
BmsI	GCATC	4 cut(s)	214, 271, 438, 1606
BoxI	GACNNNNGTC	1 cut(s)	387
BpiI	GAAGAC	1 cut(s)	2673
BplI	GAGNNNNNCTC	2 cut(s)	1545, 1577
BpmI	CTGGAG	1 cut(s)	1260
BpuEI	CTTGAG	1 cut(s)	1547
BpuMI	CCSGG	1 cut(s)	1258
Bsa29I	ATCGAT	1 cut(s)	2015
BsaAI	YACGTR	1 cut(s)	1370
BsaI	GGTCTC	2 cut(s)	950, 1565
BsaJI	CCNNGG	6 cut(s)	190, 1096, 1736, 1849, 1859, 2572
BsaWI	WCCGGW	2 cut(s)	1525, 2378
BsaXI	ACNNNNNCTCC	2 cut(s)	1430, 1460
Bsc4I	CCNNNNNNNGG	4 cut(s)	701, 1391, 2051, 2682
Bse1I	ACTGG	1 cut(s)	1144
Bse3DI	GCAATG	4 cut(s)	456, 972, 2139, 2630
BseBI	CCWGG	1 cut(s)	1347
BseCI	ATCGAT	1 cut(s)	2015
BseDI	CCNNGG	6 cut(s)	190, 1096, 1736, 1849, 1859, 2572
BseGI	GGATG	5 cut(s)	57, 610, 666, 1462, 2691
BseLI	CCNNNNNNNGG	4 cut(s)	701, 1391, 2051, 2682
BseMI	GCAATG	4 cut(s)	456, 972, 2139, 2630
BseMII	CTCAG	4 cut(s)	317, 1350, 1688, 2268
BseNI	ACTGG	1 cut(s)	1144
BseRI	GAGGAG	2 cut(s)	1071, 2067
BseXI	GCAGC	8 cut(s)	142, 557, 1489, 1796, 2085, 2173, 2200, 2201
BseYI	CCCAGC	1 cut(s)	2304
Bsh1236I	CGCG	3 cut(s)	1851, 2357, 2559
Bsh1285I	CGRYCG	1 cut(s)	1945
BshFI	GGCC	3 cut(s)	79, 1345, 2283
BshVI	ATCGAT	1 cut(s)	2015
BsiEI	CGRYCG	1 cut(s)	1945
BsiHKAI	GWGCWC	2 cut(s)	558, 1316
BsiHKCI	CYCGRG	2 cut(s)	669, 978
BsiSI	CCGG	3 cut(s)	1257, 1526, 2379
BslFI	GGGAC	3 cut(s)	130, 934, 1366
BslI	CCNNNNNNNGG	4 cut(s)	701, 1391, 2051, 2682
BsmBI	CGTCTC	2 cut(s)	1390, 1548
BsmFI	GGGAC	3 cut(s)	130, 934, 1366
BsnI	GGCC	3 cut(s)	79, 1345, 2283
Bso31I	GGTCTC	2 cut(s)	950, 1565
BsoBI	CYCGRG	2 cut(s)	669, 978
Bsp1286I	GDGCHC	3 cut(s)	558, 1263, 1316
BspACI	CCGC	8 cut(s)	461, 1505, 1849, 1851, 2265, 2355, 2557, 2569
BspANI	GGCC	3 cut(s)	79, 1345, 2283
BspCNI	CTCAG	4 cut(s)	316, 1351, 1687, 2267
BspDI	ATCGAT	1 cut(s)	2015
BspFNI	CGCG	3 cut(s)	1851, 2357, 2559
BspHI	TCATGA	1 cut(s)	1534
BspLI	GGNNCC	1 cut(s)	1530
BspMAI	CTGCAG	3 cut(s)	160, 2191, 2429
BspMI	ACCTGC	1 cut(s)	820
BspPI	GGATC	8 cut(s)	173, 205, 977, 1108, 1813, 2142, 2389, 2519
BspQI	GCTCTTC	1 cut(s)	2199
BspTNI	GGTCTC	2 cut(s)	950, 1565
BsrDI	GCAATG	4 cut(s)	456, 972, 2139, 2630
BsrI	ACTGG	1 cut(s)	1144
BssECI	CCNNGG	6 cut(s)	190, 1096, 1736, 1849, 1859, 2572
BssSI	CACGAG	1 cut(s)	624
BssT1I	CCWWGG	3 cut(s)	190, 1096, 1859
Bst2BI	CACGAG	1 cut(s)	624
Bst2UI	CCWGG	1 cut(s)	1347
Bst6I	CTCTTC	4 cut(s)	855, 2199, 2252, 2537
BstBAI	YACGTR	1 cut(s)	1370
BstC8I	GCNNGC	2 cut(s)	453, 842
BstDEI	CTNAG	7 cut(s)	303, 350, 833, 1359, 1674, 2254, 2362
BstDSI	CCRYGG	3 cut(s)	1736, 1849, 2572
BstENI	CCTNNNNNAGG	1 cut(s)	699
BstF5I	GGATG	5 cut(s)	57, 610, 666, 1462, 2691
BstFNI	CGCG	3 cut(s)	1851, 2357, 2559
BstH2I	RGCGCY	2 cut(s)	401, 571
BstHHI	GCGC	2 cut(s)	400, 570
BstMCI	CGRYCG	1 cut(s)	1945
BstMWI	GCNNNNNNNGC	5 cut(s)	152, 355, 821, 1781, 1963
BstNI	CCWGG	1 cut(s)	1347
BstNSI	RCATGY	1 cut(s)	2350
BstPAI	GACNNNNGTC	1 cut(s)	387
BstSCI	CCNGG	2 cut(s)	1256, 1345
BstSFI	CTRYAG	3 cut(s)	156, 2187, 2425
BstUI	CGCG	3 cut(s)	1851, 2357, 2559
BstV1I	GCAGC	8 cut(s)	142, 557, 1489, 1796, 2085, 2173, 2200, 2201
BstV2I	GAAGAC	1 cut(s)	2673
BstX2I	RGATCY	4 cut(s)	2147, 2394, 2417, 2511
BstXI	CCANNNNNNTGG	2 cut(s)	734, 1374
BstYI	RGATCY	4 cut(s)	2147, 2394, 2417, 2511
Bsu15I	ATCGAT	1 cut(s)	2015
BsuRI	GGCC	3 cut(s)	79, 1345, 2283
BsuTUI	ATCGAT	1 cut(s)	2015
BtgI	CCRYGG	3 cut(s)	1736, 1849, 2572
BtgZI	GCGATG	1 cut(s)	564
BtsCI	GGATG	5 cut(s)	57, 610, 666, 1462, 2691
BtsI	GCAGTG	1 cut(s)	2083
BtsIMutI	CAGTG	5 cut(s)	1064, 1935, 2031, 2083, 2451
BveI	ACCTGC	1 cut(s)	820
Cac8I	GCNNGC	2 cut(s)	453, 842
CciI	TCATGA	1 cut(s)	1534
CfoI	GCGC	2 cut(s)	400, 570
Cfr13I	GGNCC	2 cut(s)	299, 1853
Cfr42I	CCGCGG	1 cut(s)	1852
ClaI	ATCGAT	1 cut(s)	2015
CseI	GACGC	1 cut(s)	2219
Csp6I	GTAC	6 cut(s)	326, 1415, 1935, 1976, 2159, 2600
CspCI	CAANNNNNGTGG	2 cut(s)	1644, 1679
CviAII	CATG	9 cut(s)	253, 271, 323, 739, 1048, 1535, 2122, 2347, 2399
CviQI	GTAC	6 cut(s)	326, 1415, 1935, 1976, 2159, 2600
DdeI	CTNAG	7 cut(s)	303, 350, 833, 1359, 1674, 2254, 2362
DraI	TTTAAA	2 cut(s)	933, 2718
DraIII	CACNNNGTG	2 cut(s)	434, 1370
Eam1104I	CTCTTC	4 cut(s)	855, 2199, 2252, 2537
EarI	CTCTTC	4 cut(s)	855, 2199, 2252, 2537
EciI	GGCGGA	1 cut(s)	2558
Ecl136II	GAGCTC	2 cut(s)	556, 1314
Eco130I	CCWWGG	3 cut(s)	190, 1096, 1859
Eco147I	AGGCCT	1 cut(s)	79
Eco24I	GRGCYC	3 cut(s)	558, 1263, 1316
Eco31I	GGTCTC	2 cut(s)	950, 1565
Eco47I	GGWCC	2 cut(s)	299, 1853
Eco53kI	GAGCTC	2 cut(s)	556, 1314
Eco57I	CTGAAG	1 cut(s)	386
Eco72I	CACGTG	1 cut(s)	1370
Eco88I	CYCGRG	2 cut(s)	669, 978
EcoICRI	GAGCTC	2 cut(s)	556, 1314
EcoNI	CCTNNNNNAGG	1 cut(s)	699
EcoRI	GAATTC	2 cut(s)	2258, 2288
EcoRII	CCWGG	1 cut(s)	1345
EcoT14I	CCWWGG	3 cut(s)	190, 1096, 1859
EcoT38I	GRGCYC	3 cut(s)	558, 1263, 1316
ErhI	CCWWGG	3 cut(s)	190, 1096, 1859
Esp3I	CGTCTC	2 cut(s)	1390, 1548
FaeI	CATG	9 cut(s)	256, 274, 326, 742, 1051, 1538, 2125, 2350, 2402
FalI	AAGNNNNNCTT	2 cut(s)	698, 730
FaqI	GGGAC	3 cut(s)	130, 934, 1366
FatI	CATG	9 cut(s)	252, 270, 322, 738, 1047, 1534, 2121, 2346, 2398
FauNDI	CATATG	1 cut(s)	1195
FblI	GTMKAC	1 cut(s)	2058
Fnu4HI	GCNGC	8 cut(s)	156, 571, 1503, 1785, 2074, 2187, 2190, 2214
FokI	GGATG	5 cut(s)	64, 617, 673, 1469, 2698
FriOI	GRGCYC	3 cut(s)	558, 1263, 1316
Fsp4HI	GCNGC	8 cut(s)	156, 571, 1503, 1785, 2074, 2187, 2190, 2214
FspBI	CTAG	8 cut(s)	183, 387, 432, 998, 1026, 1073, 2645, 2727
GlaI	GCGC	2 cut(s)	399, 569
GluI	GCNGC	8 cut(s)	156, 571, 1503, 1785, 2074, 2187, 2190, 2214
GsaI	CCCAGC	1 cut(s)	2308
GsuI	CTGGAG	1 cut(s)	1260
HaeII	RGCGCY	2 cut(s)	401, 571
HaeIII	GGCC	3 cut(s)	79, 1345, 2283
HapII	CCGG	3 cut(s)	1257, 1526, 2379
HgaI	GACGC	1 cut(s)	2219
HhaI	GCGC	2 cut(s)	400, 570
Hin1II	CATG	9 cut(s)	256, 274, 326, 742, 1051, 1538, 2125, 2350, 2402
Hin6I	GCGC	2 cut(s)	398, 568
HinP1I	GCGC	2 cut(s)	398, 568
HincII	GTYRAC	5 cut(s)	780, 802, 1041, 1591, 2352
HindII	GTYRAC	5 cut(s)	780, 802, 1041, 1591, 2352
HindIII	AAGCTT	3 cut(s)	731, 1295, 2482
HpaI	GTTAAC	2 cut(s)	802, 1041
HpaII	CCGG	3 cut(s)	1257, 1526, 2379
HphI	GGTGA	8 cut(s)	56, 140, 238, 505, 622, 2034, 2284, 2598
Hpy99I	CGWCG	1 cut(s)	220
HpyAV	CCTTC	7 cut(s)	554, 558, 1030, 1045, 2613, 2676, 2733
HpyCH4IV	ACGT	6 cut(s)	218, 936, 1209, 1369, 2238, 2620
HpyF10VI	GCNNNNNNNGC	5 cut(s)	152, 355, 821, 1781, 1963
HpyF3I	CTNAG	7 cut(s)	303, 350, 833, 1359, 1674, 2254, 2362
HpySE526I	ACGT	6 cut(s)	218, 936, 1209, 1369, 2238, 2620
Hsp92II	CATG	9 cut(s)	256, 274, 326, 742, 1051, 1538, 2125, 2350, 2402
HspAI	GCGC	2 cut(s)	398, 568
KspAI	GTTAAC	2 cut(s)	802, 1041
KspI	CCGCGG	1 cut(s)	1852
LguI	GCTCTTC	1 cut(s)	2199
LmnI	GCTCC	4 cut(s)	65, 98, 257, 1714
Lsp1109I	GCAGC	8 cut(s)	142, 557, 1489, 1796, 2085, 2173, 2200, 2201
LweI	GCATC	4 cut(s)	214, 271, 438, 1606
MaeI	CTAG	8 cut(s)	183, 387, 432, 998, 1026, 1073, 2645, 2727
MaeII	ACGT	6 cut(s)	218, 936, 1209, 1369, 2238, 2620
MfeI	CAATTG	1 cut(s)	2217
MflI	RGATCY	4 cut(s)	2147, 2394, 2417, 2511
MhlI	GDGCHC	3 cut(s)	558, 1263, 1316
MlyI	GAGTC	4 cut(s)	628, 1289, 2014, 2321
MmeI	TCCRAC	3 cut(s)	76, 1434, 1783
MroXI	GAANNNNTTC	1 cut(s)	689
MslI	CAYNNNNRTG	2 cut(s)	251, 1208
MspA1I	CMGCKG	1 cut(s)	1851
MspI	CCGG	3 cut(s)	1257, 1526, 2379
MspR9I	CCNGG	2 cut(s)	1258, 1347
MssI	GTTTAAAC	1 cut(s)	933
MunI	CAATTG	1 cut(s)	2217
MvaI	CCWGG	1 cut(s)	1347
MvnI	CGCG	3 cut(s)	1851, 2357, 2559
MwoI	GCNNNNNNNGC	5 cut(s)	152, 355, 821, 1781, 1963
NciI	CCSGG	1 cut(s)	1258
NdeI	CATATG	1 cut(s)	1195
NlaIII	CATG	9 cut(s)	256, 274, 326, 742, 1051, 1538, 2125, 2350, 2402
NlaIV	GGNNCC	1 cut(s)	1530
NmeAIII	GCCGAG	2 cut(s)	374, 2145
NmuCI	GTSAC	6 cut(s)	1028, 1062, 1281, 1336, 1597, 1714
NspI	RCATGY	1 cut(s)	2350
PaeR7I	CTCGAG	1 cut(s)	978
PagI	TCATGA	1 cut(s)	1534
PceI	AGGCCT	1 cut(s)	79
PciI	ACATGT	1 cut(s)	2346
PciSI	GCTCTTC	1 cut(s)	2199
PcsI	WCGNNNNNNNCGW	2 cut(s)	933, 1416
PdmI	GAANNNNTTC	1 cut(s)	689
PkrI	GCNGC	8 cut(s)	157, 572, 1504, 1786, 2075, 2188, 2191, 2215
PleI	GAGTC	4 cut(s)	627, 1288, 2013, 2321
PmaCI	CACGTG	1 cut(s)	1370
PmeI	GTTTAAAC	1 cut(s)	933
PmlI	CACGTG	1 cut(s)	1370
PpsI	GAGTC	4 cut(s)	627, 1288, 2013, 2321
Ppu21I	YACGTR	1 cut(s)	1370
PscI	ACATGT	1 cut(s)	2346
PshAI	GACNNNNGTC	1 cut(s)	387
PsiI	TTATAA	1 cut(s)	635
Psp124BI	GAGCTC	2 cut(s)	558, 1316
Psp1406I	AACGTT	1 cut(s)	936
Psp6I	CCWGG	1 cut(s)	1345
PspCI	CACGTG	1 cut(s)	1370
PspFI	CCCAGC	1 cut(s)	2304
PspGI	CCWGG	1 cut(s)	1345
PspN4I	GGNNCC	1 cut(s)	1530
PspPI	GGNCC	2 cut(s)	299, 1853
PspXI	VCTCGAGB	1 cut(s)	978
PstI	CTGCAG	3 cut(s)	160, 2191, 2429
PsuI	RGATCY	4 cut(s)	2147, 2394, 2417, 2511
RsaI	GTAC	6 cut(s)	327, 1416, 1936, 1977, 2160, 2601
RsaNI	GTAC	6 cut(s)	326, 1415, 1935, 1976, 2159, 2600
RseI	CAYNNNNRTG	2 cut(s)	251, 1208
SacI	GAGCTC	2 cut(s)	558, 1316
SacII	CCGCGG	1 cut(s)	1852
SapI	GCTCTTC	1 cut(s)	2199
SatI	GCNGC	8 cut(s)	156, 571, 1503, 1785, 2074, 2187, 2190, 2214
Sau96I	GGNCC	2 cut(s)	299, 1853
SchI	GAGTC	4 cut(s)	628, 1289, 2014, 2321
ScrFI	CCNGG	2 cut(s)	1258, 1347
SduI	GDGCHC	3 cut(s)	558, 1263, 1316
SfaNI	GCATC	4 cut(s)	214, 271, 438, 1606
SfcI	CTRYAG	3 cut(s)	156, 2187, 2425
Sfr274I	CTCGAG	1 cut(s)	978
Sfr303I	CCGCGG	1 cut(s)	1852
SgrBI	CCGCGG	1 cut(s)	1852
SinI	GGWCC	2 cut(s)	299, 1853
SlaI	CTCGAG	1 cut(s)	978
SmiMI	CAYNNNNRTG	2 cut(s)	251, 1208
SmlI	CTYRAG	2 cut(s)	978, 1562
SmoI	CTYRAG	2 cut(s)	978, 1562
SseBI	AGGCCT	1 cut(s)	79
SsiI	CCGC	8 cut(s)	461, 1505, 1849, 1851, 2265, 2355, 2557, 2569
SspI	AATATT	2 cut(s)	105, 142
SspMI	CTAG	8 cut(s)	183, 387, 432, 998, 1026, 1073, 2645, 2727
SstI	GAGCTC	2 cut(s)	558, 1316
StuI	AGGCCT	1 cut(s)	79
StyD4I	CCNGG	2 cut(s)	1256, 1345
StyI	CCWWGG	3 cut(s)	190, 1096, 1859
TaiI	ACGT	6 cut(s)	221, 939, 1212, 1372, 2241, 2623
TaqI	TCGA	5 cut(s)	558, 979, 1310, 2015, 2343
TaqII	GACCGA	1 cut(s)	1931
TatI	WGTACW	2 cut(s)	325, 1934
TscAI	CASTG	5 cut(s)	1071, 1935, 2031, 2083, 2451
TseFI	GTSAC	6 cut(s)	1028, 1062, 1281, 1336, 1597, 1714
TseI	GCWGC	8 cut(s)	155, 570, 1502, 1784, 2073, 2186, 2189, 2213
Tsp45I	GTSAC	6 cut(s)	1028, 1062, 1281, 1336, 1597, 1714
TspGWI	ACGGA	2 cut(s)	1725, 2217
TspRI	CASTG	5 cut(s)	1071, 1935, 2031, 2083, 2451
VpaK11BI	GGWCC	2 cut(s)	299, 1853
XagI	CCTNNNNNAGG	1 cut(s)	699
XapI	RAATTY	5 cut(s)	172, 868, 1583, 2258, 2288
XbaI	TCTAGA	2 cut(s)	997, 2726
XceI	RCATGY	1 cut(s)	2350
XhoI	CTCGAG	1 cut(s)	978
XmiI	GTMKAC	1 cut(s)	2058
XmnI	GAANNNNTTC	1 cut(s)	689
XspI	CTAG	8 cut(s)	183, 387, 432, 998, 1026, 1073, 2645, 2727

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.