Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0003979

Physical Location & Seq

Genomic Coordinates Reverse (-)

8473047 .. 8475204

Gene Structure 2158 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G005260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGAATCTAGTTTGCCTCTTGGCAATCCTCATTATCTATATTGGAAGATCCACAGAAGGAGCATCAAGACCTGCTGTTGTGAACATTGGAGCTATGTTTGCAGTAAGCACCATTAATGGAGGAATCTCAAAGATTGCCATTAAGGCTGCCGAGGAGGATGTGAATGCCGATCCAAGCATTCTTAGTGGAACTAAATTTTCTGTATCTATGCATGATTCGAACTACAGTGGATTTCTCAGCATCATCGGAGCACTAAATTACATGGAGTCTGATACCGTGGCTATAATTGGTCCTCAAACTTCTGTAATGGCTCATATAGTCTCACATCTTGCAAATGAACTACACGTGCCGTTACTGTCATTCACTGCACTAGATCCCACCCTATCAAGCCTGCAATACCCTTACTTTCTTCAAACTGCACCAAATGATCAATTCCAGATGAATGCTATTGGAGACATGGTTAGTTATTTCGGTTGGAAAGAGGTGGTTGCACTTTTGACTGATGATGATCAGAGCCGAAATGTTGGCAAGCAGTTGCTGGAAAACATATTGCAAACCAACACGACCGGTCTCACTGGTCCACTGGCTTTTCATTCAGACAGGTCCCTAGTGAATCCTTCCTATGATATCATTAACATAATTGAAAATGGATATCAACAGATTGGATACTGGTCTAACAATTCAGGGCTATCTGTTGTGCCCCCTGAGACAGCACCCAACCGGTCAAGTTCAAACCAACATTTAGCTGCTGTTGTATGGCCTGGAGGGACAACAGATAAGCCCCGAGGGTGGGTTTTTCCAAACAATGGGAAGCAGTTAATAATTGGAATACCAGATAGAGTAAGCTATCGTGACTTTGTGTCACGACAAAATGGTACAGATATAGCTAAAGGATACTGCATTGACATTTTCCTTGCAGCCATAAAGTTGCTTCCCTATGCAGTTCCACATAGGTTTGAGCTGTTTGGTGATGGCCACAAGAACCCAAGCTACTACGAGCTTGTTAGCAATATCCCTTCAGGTAAGTTTGATGCTGCTGTTGGTCACATTGCAATAGTTGCAAACAGAACAAAGATTGTGGACTTCACTCAGCCATTTATAGAGTCAGGGCTAGTAGTGGTGGCACCAGTTAGGGGTTCAGATGCAAGAGCTTGGGCATTCTTGAAGCCGTTTTCTCCAATGATGTGGGGTGTCACAGCAGCTTTCTTCCTAATTGTTGGATCAGTCCTGTGGGTTCTTGAACATAGATCAAATGATGATTTCCGGGCCCTCCTAGGAAACAGATTGGCACAATTTTATGGTAAGTTTATCTTCTCTACTATGTTTTTTGCTCATAGAGAAAATACTGTGAGCTTACTAGGGCGAATGGTGCTAATCATCTGGCTTTTTATAATTCTGATAATCAACTCGAGCTACACAGCTAGCCTGACATCAATGCTCACAGTACAACAATTATCTTCACCCATCACTGGAATCGATAATAGGATTCCAAGTAGGAGGGACAGAATTCACCAAAAGTGGCTGGGGATTTGTGAGTACCTCAACATAATTGTTTTACGTCTTCCTATGCAAATACTTCACTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

528

Amino Acids

58.26

Weight (kDa)

6.67

Isoelectric Point (pI)

37.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	41 - 183	1.3e-07	Periplasmic binding protein
ANF_receptor	PF01094	44 - 180	3.4e-39	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	290 - 375	4.1e-08	Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan	PF00060	394 - 496	3.6e-23	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003979)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17260 AT4G35290 AT4G35290 AT4G35290 AT4G35290 AT4G35290 AT4G35290
fragaria_vesca	FvH4_2g16810 FvH4_2g16810 FvH4_2g16810 FvH4_2g16810 FvH4_2g16810 FvH4_2g16810 FvH4_2g16810 FvH4_2g16810 FvH4_2g16810
malus_domestica	MD05G1139700.v1.1 MD10G1141900.v1.1
prunus_persica	Prupe.8G180400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0280931
rosa_laevigata	RLG00000013015
rosa_multiflora	Rmu_ssc0000288.1_g000001
rosa_roxburghii	Rroxscaffold_7G00187480
rosa_rugosa	Rorug06G0136800 Rorug06G0136900 Rorug06G0137000 Rorug06G0137000 Rorug06G0137000
rosa_samantha	Rh6AG249300 Rh6CG252000 Rh6DG243800
rosa_wichuraiana	Rw6G005260 Rw6G021570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1391
Acc36I	ACCTGC	1 cut(s)	79
AccB1I	GGYRCC	1 cut(s)	1123
AccB7I	CCANNNNNTGG	1 cut(s)	806
AclWI	GGATC	4 cut(s)	42, 164, 368, 1228
AcoI	YGGCCR	1 cut(s)	973
AcsI	RAATTY	2 cut(s)	194, 1506
AcuI	CTGAAG	1 cut(s)	1002
AcvI	CACGTG	1 cut(s)	346
AfaI	GTAC	3 cut(s)	877, 1446, 1538
AfiI	CCNNNNNNNGG	5 cut(s)	789, 790, 806, 1133, 1469
AflIII	ACRYGT	1 cut(s)	343
AgeI	ACCGGT	2 cut(s)	566, 720
AgsI	TTSAA	5 cut(s)	413, 644, 732, 1165, 1241
AhdI	GACNNNNNGTC	1 cut(s)	859
AjnI	CCWGG	1 cut(s)	760
Alw21I	GWGCWC	1 cut(s)	253
Alw26I	GTCTC	4 cut(s)	325, 447, 575, 701
AlwI	GGATC	4 cut(s)	42, 164, 368, 1228
AlwNI	CAGNNNCTG	1 cut(s)	538
Ama87I	CYCGRG	2 cut(s)	783, 1408
AoxI	GGCC	3 cut(s)	758, 973, 1266
ApaI	GGGCCC	1 cut(s)	1270
ApeKI	GCWGC	5 cut(s)	146, 746, 917, 1034, 1199
ApoI	RAATTY	2 cut(s)	194, 1506
AseI	ATTAAT	1 cut(s)	114
AsiGI	ACCGGT	2 cut(s)	566, 720
AspA2I	CCTAGG	1 cut(s)	1273
AspS9I	GGNCC	5 cut(s)	290, 578, 603, 1266, 1267
AsuC2I	CCSGG	1 cut(s)	1265
AsuHPI	GGTGA	3 cut(s)	980, 1452, 1502
AsuII	TTCGAA	1 cut(s)	218
AsuNHI	GCTAGC	1 cut(s)	1421
AvaI	CYCGRG	2 cut(s)	783, 1408
AvaII	GGWCC	3 cut(s)	290, 578, 603
AvrII	CCTAGG	1 cut(s)	1273
BaeGI	GKGCMC	2 cut(s)	702, 1270
BalI	TGGCCA	1 cut(s)	975
BanI	GGYRCC	1 cut(s)	1123
BanII	GRGCYC	1 cut(s)	1270
BbrPI	CACGTG	1 cut(s)	346
BbsI	GAAGAC	1 cut(s)	1553
Bbv12I	GWGCWC	1 cut(s)	253
BbvI	GCAGC	5 cut(s)	133, 733, 929, 1021, 1211
BccI	CCATC	2 cut(s)	965, 1472
BceAI	ACGGC	2 cut(s)	334, 1153
BciT130I	CCWGG	1 cut(s)	762
BciVI	GTATCC	2 cut(s)	659, 887
BclI	TGATCA	2 cut(s)	427, 508
BcnI	CCSGG	1 cut(s)	1265
BcoDI	GTCTC	4 cut(s)	325, 447, 575, 701
BfaI	CTAG	7 cut(s)	8, 371, 608, 1112, 1274, 1358, 1422
BfmI	CTRYAG	1 cut(s)	223
BfuAI	ACCTGC	1 cut(s)	79
BfuI	GTATCC	2 cut(s)	659, 887
BglI	GCCNNNNNGGC	1 cut(s)	143
BisI	GCNGC	5 cut(s)	147, 747, 918, 1035, 1200
BlnI	CCTAGG	1 cut(s)	1273
BlsI	GCNGC	5 cut(s)	148, 748, 919, 1036, 1201
Bme1390I	CCNGG	2 cut(s)	762, 1265
Bme18I	GGWCC	3 cut(s)	290, 578, 603
BmeRI	GACNNNNNGTC	1 cut(s)	859
BmeT110I	CYCGRG	2 cut(s)	783, 1408
BmgT120I	GGNCC	5 cut(s)	290, 578, 603, 1266, 1267
BmiI	GGNNCC	3 cut(s)	605, 1125, 1268
BmrFI	CCNGG	2 cut(s)	762, 1265
BmsI	GCATC	4 cut(s)	71, 249, 1021, 1132
BmtI	GCTAGC	1 cut(s)	1425
BpiI	GAAGAC	1 cut(s)	1553
BpmI	CTGGAG	1 cut(s)	783
Bpu14I	TTCGAA	1 cut(s)	218
BpuMI	CCSGG	1 cut(s)	1265
Bsa29I	ATCGAT	1 cut(s)	1476
BsaAI	YACGTR	1 cut(s)	346
BsaBI	GATNNNNATC	1 cut(s)	507
BsaI	GGTCTC	1 cut(s)	575
BsaJI	CCNNGG	4 cut(s)	150, 276, 784, 1273
BsaWI	WCCGGW	2 cut(s)	566, 720
BsaXI	ACNNNNNCTCC	2 cut(s)	444, 474
Bsc4I	CCNNNNNNNGG	5 cut(s)	789, 790, 806, 1133, 1469
Bse118I	RCCGGY	2 cut(s)	566, 720
Bse1I	ACTGG	5 cut(s)	580, 588, 674, 1127, 1474
Bse3DI	GCAATG	1 cut(s)	1047
Bse8I	GATNNNNATC	1 cut(s)	507
BseBI	CCWGG	1 cut(s)	762
BseCI	ATCGAT	1 cut(s)	1476
BseDI	CCNNGG	4 cut(s)	150, 276, 784, 1273
BseGI	GGATG	1 cut(s)	163
BseJI	GATNNNNATC	1 cut(s)	507
BseLI	CCNNNNNNNGG	5 cut(s)	789, 790, 806, 1133, 1469
BseMI	GCAATG	1 cut(s)	1047
BseMII	CTCAG	3 cut(s)	250, 696, 1103
BseNI	ACTGG	5 cut(s)	580, 588, 674, 1127, 1474
BseRI	GAGGAG	1 cut(s)	167
BseSI	GKGCMC	2 cut(s)	702, 1270
BseXI	GCAGC	5 cut(s)	133, 733, 929, 1021, 1211
BseYI	CCCAGC	1 cut(s)	1522
BsgI	GTGCAG	2 cut(s)	351, 402
Bsh1285I	CGRYCG	1 cut(s)	567
BshFI	GGCC	3 cut(s)	760, 975, 1268
BshNI	GGYRCC	1 cut(s)	1123
BshTI	ACCGGT	2 cut(s)	566, 720
BshVI	ATCGAT	1 cut(s)	1476
BsiEI	CGRYCG	1 cut(s)	567
BsiHKAI	GWGCWC	1 cut(s)	253
BsiHKCI	CYCGRG	2 cut(s)	783, 1408
BsiSI	CCGG	3 cut(s)	567, 721, 1264
BslFI	GGGAC	3 cut(s)	589, 781, 1514
BslI	CCNNNNNNNGG	5 cut(s)	789, 790, 806, 1133, 1469
BsmAI	GTCTC	4 cut(s)	325, 447, 575, 701
BsmFI	GGGAC	3 cut(s)	589, 781, 1514
BsmI	GAATGC	4 cut(s)	169, 177, 448, 1157
BsnI	GGCC	3 cut(s)	760, 975, 1268
Bso31I	GGTCTC	1 cut(s)	575
BsoBI	CYCGRG	2 cut(s)	783, 1408
Bsp119I	TTCGAA	1 cut(s)	218
Bsp120I	GGGCCC	1 cut(s)	1266
Bsp1286I	GDGCHC	3 cut(s)	253, 702, 1270
Bsp143I	GATC	7 cut(s)	47, 169, 373, 427, 508, 1220, 1247
BspANI	GGCC	3 cut(s)	760, 975, 1268
BspCNI	CTCAG	3 cut(s)	249, 697, 1102
BspDI	ATCGAT	1 cut(s)	1476
BspLI	GGNNCC	3 cut(s)	605, 1125, 1268
BspMI	ACCTGC	1 cut(s)	79
BspOI	GCTAGC	1 cut(s)	1425
BspPI	GGATC	4 cut(s)	42, 164, 368, 1228
BspT104I	TTCGAA	1 cut(s)	218
BspT107I	GGYRCC	1 cut(s)	1123
BspTNI	GGTCTC	1 cut(s)	575
BsrDI	GCAATG	1 cut(s)	1047
BsrFI	RCCGGY	2 cut(s)	566, 720
BsrI	ACTGG	5 cut(s)	580, 588, 674, 1127, 1474
BssAI	RCCGGY	2 cut(s)	566, 720
BssECI	CCNNGG	4 cut(s)	150, 276, 784, 1273
BssMI	GATC	7 cut(s)	47, 169, 373, 427, 508, 1220, 1247
BssT1I	CCWWGG	1 cut(s)	1273
Bst2UI	CCWGG	1 cut(s)	762
Bst4CI	ACNGT	5 cut(s)	227, 277, 357, 1348, 1444
BstAPI	GCANNNNNTGC	1 cut(s)	1058
BstBAI	YACGTR	1 cut(s)	346
BstBI	TTCGAA	1 cut(s)	218
BstC8I	GCNNGC	3 cut(s)	392, 530, 1423
BstDEI	CTNAG	4 cut(s)	182, 236, 705, 1089
BstDSI	CCRYGG	1 cut(s)	276
BstF5I	GGATG	1 cut(s)	163
BstKTI	GATC	7 cut(s)	50, 172, 376, 430, 511, 1223, 1250
BstMAI	GTCTC	4 cut(s)	325, 447, 575, 701
BstMBI	GATC	7 cut(s)	47, 169, 373, 427, 508, 1220, 1247
BstMCI	CGRYCG	1 cut(s)	567
BstMWI	GCNNNNNNNGC	4 cut(s)	98, 143, 1058, 1369
BstNI	CCWGG	1 cut(s)	762
BstSCI	CCNGG	2 cut(s)	760, 1263
BstSFI	CTRYAG	1 cut(s)	223
BstSLI	GKGCMC	2 cut(s)	702, 1270
BstV1I	GCAGC	5 cut(s)	133, 733, 929, 1021, 1211
BstV2I	GAAGAC	1 cut(s)	1553
BstX2I	RGATCY	2 cut(s)	47, 373
BstXI	CCANNNNNNTGG	1 cut(s)	1185
BstYI	RGATCY	2 cut(s)	47, 373
Bsu15I	ATCGAT	1 cut(s)	1476
BsuI	GTATCC	2 cut(s)	659, 887
BsuRI	GGCC	3 cut(s)	760, 975, 1268
BsuTUI	ATCGAT	1 cut(s)	1476
BtgI	CCRYGG	1 cut(s)	276
BtsCI	GGATG	1 cut(s)	163
BtsI	GCAGTG	1 cut(s)	363
BtsIMutI	CAGTG	5 cut(s)	232, 363, 573, 581, 1467
BveI	ACCTGC	1 cut(s)	79
Cac8I	GCNNGC	3 cut(s)	392, 530, 1423
CaiI	CAGNNNCTG	1 cut(s)	538
Cfr10I	RCCGGY	2 cut(s)	566, 720
Cfr13I	GGNCC	5 cut(s)	290, 578, 603, 1266, 1267
ClaI	ATCGAT	1 cut(s)	1476
Csp6I	GTAC	3 cut(s)	876, 1445, 1537
CspAI	ACCGGT	2 cut(s)	566, 720
CspCI	CAANNNNNGTGG	2 cut(s)	1059, 1094
CviAII	CATG	3 cut(s)	212, 262, 457
CviQI	GTAC	3 cut(s)	876, 1445, 1537
DdeI	CTNAG	4 cut(s)	182, 236, 705, 1089
DpnI	GATC	7 cut(s)	49, 171, 375, 429, 510, 1222, 1249
DpnII	GATC	7 cut(s)	47, 169, 373, 427, 508, 1220, 1247
DriI	GACNNNNNGTC	1 cut(s)	859
EaeI	YGGCCR	1 cut(s)	973
Eam1105I	GACNNNNNGTC	1 cut(s)	859
Eco130I	CCWWGG	1 cut(s)	1273
Eco24I	GRGCYC	1 cut(s)	1270
Eco31I	GGTCTC	1 cut(s)	575
Eco32I	GATATC	2 cut(s)	628, 653
Eco47I	GGWCC	3 cut(s)	290, 578, 603
Eco57I	CTGAAG	1 cut(s)	1002
Eco72I	CACGTG	1 cut(s)	346
Eco88I	CYCGRG	2 cut(s)	783, 1408
EcoO109I	RGGNCCY	2 cut(s)	603, 1267
EcoRI	GAATTC	1 cut(s)	1506
EcoRII	CCWGG	1 cut(s)	760
EcoRV	GATATC	2 cut(s)	628, 653
EcoT14I	CCWWGG	1 cut(s)	1273
EcoT22I	ATGCAT	1 cut(s)	213
EcoT38I	GRGCYC	1 cut(s)	1270
ErhI	CCWWGG	1 cut(s)	1273
FaeI	CATG	3 cut(s)	215, 265, 460
FalI	AAGNNNNNCTT	2 cut(s)	1295, 1327
FaqI	GGGAC	3 cut(s)	589, 781, 1514
FatI	CATG	3 cut(s)	211, 261, 456
FbaI	TGATCA	2 cut(s)	427, 508
Fnu4HI	GCNGC	5 cut(s)	147, 747, 918, 1035, 1200
FokI	GGATG	1 cut(s)	170
FriOI	GRGCYC	1 cut(s)	1270
Fsp4HI	GCNGC	5 cut(s)	147, 747, 918, 1035, 1200
FspBI	CTAG	7 cut(s)	8, 371, 608, 1112, 1274, 1358, 1422
GluI	GCNGC	5 cut(s)	147, 747, 918, 1035, 1200
GsaI	CCCAGC	1 cut(s)	1526
GsuI	CTGGAG	1 cut(s)	783
HaeIII	GGCC	3 cut(s)	760, 975, 1268
HapII	CCGG	3 cut(s)	567, 721, 1264
Hin1II	CATG	3 cut(s)	215, 265, 460
HinfI	GANTC	8 cut(s)	4, 123, 215, 266, 613, 1103, 1473, 1486
HpaII	CCGG	3 cut(s)	567, 721, 1264
HphI	GGTGA	3 cut(s)	980, 1452, 1502
Hpy166II	GTNNAC	3 cut(s)	82, 581, 1081
Hpy188I	TCNGA	6 cut(s)	248, 271, 513, 598, 1141, 1398
Hpy188III	TCNNGA	6 cut(s)	66, 436, 851, 864, 1162, 1238
Hpy8I	GTNNAC	3 cut(s)	82, 581, 1081
HpyAV	CCTTC	3 cut(s)	50, 627, 1026
HpyCH4III	ACNGT	5 cut(s)	227, 277, 357, 1348, 1444
HpyCH4IV	ACGT	2 cut(s)	345, 1558
HpyF10VI	GCNNNNNNNGC	4 cut(s)	98, 143, 1058, 1369
HpyF3I	CTNAG	4 cut(s)	182, 236, 705, 1089
HpySE526I	ACGT	2 cut(s)	345, 1558
Hsp92II	CATG	3 cut(s)	215, 265, 460
Ksp22I	TGATCA	2 cut(s)	427, 508
Kzo9I	GATC	7 cut(s)	47, 169, 373, 427, 508, 1220, 1247
LmnI	GCTCC	3 cut(s)	59, 89, 248
Lsp1109I	GCAGC	5 cut(s)	133, 733, 929, 1021, 1211
LweI	GCATC	4 cut(s)	71, 249, 1021, 1132
MaeI	CTAG	7 cut(s)	8, 371, 608, 1112, 1274, 1358, 1422
MaeII	ACGT	2 cut(s)	345, 1558
MaeIII	GTNAC	5 cut(s)	351, 851, 861, 1043, 1192
MalI	GATC	7 cut(s)	49, 171, 375, 429, 510, 1222, 1249
MboI	GATC	7 cut(s)	47, 169, 373, 427, 508, 1220, 1247
MboII	GAAGA	6 cut(s)	57, 401, 1198, 1303, 1449, 1553
MflI	RGATCY	2 cut(s)	47, 373
MhlI	GDGCHC	3 cut(s)	253, 702, 1270
MlsI	TGGCCA	1 cut(s)	975
MluNI	TGGCCA	1 cut(s)	975
MlyI	GAGTC	2 cut(s)	275, 1112
MmeI	TCCRAC	2 cut(s)	455, 1198
Mox20I	TGGCCA	1 cut(s)	975
Mph1103I	ATGCAT	1 cut(s)	213
MscI	TGGCCA	1 cut(s)	975
MseI	TTAA	5 cut(s)	114, 141, 633, 818, 1585
Msp20I	TGGCCA	1 cut(s)	975
MspI	CCGG	3 cut(s)	567, 721, 1264
MspR9I	CCNGG	2 cut(s)	762, 1265
Mva1269I	GAATGC	4 cut(s)	169, 177, 448, 1157
MvaI	CCWGG	1 cut(s)	762
MwoI	GCNNNNNNNGC	4 cut(s)	98, 143, 1058, 1369
NciI	CCSGG	1 cut(s)	1265
NdeII	GATC	7 cut(s)	47, 169, 373, 427, 508, 1220, 1247
NheI	GCTAGC	1 cut(s)	1421
NlaIII	CATG	3 cut(s)	215, 265, 460
NlaIV	GGNNCC	3 cut(s)	605, 1125, 1268
NmeAIII	GCCGAG	1 cut(s)	175
NmuCI	GTSAC	4 cut(s)	851, 861, 1043, 1192
NsiI	ATGCAT	1 cut(s)	213
NspV	TTCGAA	1 cut(s)	218
PaeR7I	CTCGAG	1 cut(s)	1408
PctI	GAATGC	4 cut(s)	169, 177, 448, 1157
PfeI	GAWTC	6 cut(s)	4, 123, 215, 613, 1473, 1486
PflMI	CCANNNNNTGG	1 cut(s)	806
PinAI	ACCGGT	2 cut(s)	566, 720
PkrI	GCNGC	5 cut(s)	148, 748, 919, 1036, 1201
PleI	GAGTC	2 cut(s)	274, 1111
PmaCI	CACGTG	1 cut(s)	346
PmlI	CACGTG	1 cut(s)	346
PpsI	GAGTC	2 cut(s)	274, 1111
Ppu21I	YACGTR	1 cut(s)	346
PpuMI	RGGWCCY	1 cut(s)	603
PshBI	ATTAAT	1 cut(s)	114
PsiI	TTATAA	1 cut(s)	1391
Psp5II	RGGWCCY	1 cut(s)	603
Psp6I	CCWGG	1 cut(s)	760
PspCI	CACGTG	1 cut(s)	346
PspFI	CCCAGC	1 cut(s)	1522
PspGI	CCWGG	1 cut(s)	760
PspN4I	GGNNCC	3 cut(s)	605, 1125, 1268
PspOMI	GGGCCC	1 cut(s)	1266
PspPI	GGNCC	5 cut(s)	290, 578, 603, 1266, 1267
PspPPI	RGGWCCY	1 cut(s)	603
PspXI	VCTCGAGB	1 cut(s)	1408
PsrI	GAACNNNNNNTAC	2 cut(s)	974, 1006
PstNI	CAGNNNCTG	1 cut(s)	538
PsuI	RGATCY	2 cut(s)	47, 373
RsaI	GTAC	3 cut(s)	877, 1446, 1538
RsaNI	GTAC	3 cut(s)	876, 1445, 1537
SaqAI	TTAA	5 cut(s)	114, 141, 633, 818, 1585
SatI	GCNGC	5 cut(s)	147, 747, 918, 1035, 1200
Sau3AI	GATC	7 cut(s)	47, 169, 373, 427, 508, 1220, 1247
Sau96I	GGNCC	5 cut(s)	290, 578, 603, 1266, 1267
SchI	GAGTC	2 cut(s)	275, 1112
ScrFI	CCNGG	2 cut(s)	762, 1265
SduI	GDGCHC	3 cut(s)	253, 702, 1270
SfaNI	GCATC	4 cut(s)	71, 249, 1021, 1132
SfcI	CTRYAG	1 cut(s)	223
Sfr274I	CTCGAG	1 cut(s)	1408
SfuI	TTCGAA	1 cut(s)	218
SinI	GGWCC	3 cut(s)	290, 578, 603
SlaI	CTCGAG	1 cut(s)	1408
SmlI	CTYRAG	1 cut(s)	1408
SmoI	CTYRAG	1 cut(s)	1408
SspMI	CTAG	7 cut(s)	8, 371, 608, 1112, 1274, 1358, 1422
StyD4I	CCNGG	2 cut(s)	760, 1263
StyI	CCWWGG	1 cut(s)	1273
TaaI	ACNGT	5 cut(s)	227, 277, 357, 1348, 1444
TaiI	ACGT	2 cut(s)	348, 1561
TaqI	TCGA	3 cut(s)	218, 1409, 1476
TatI	WGTACW	1 cut(s)	1444
TfiI	GAWTC	6 cut(s)	4, 123, 215, 613, 1473, 1486
Tru1I	TTAA	5 cut(s)	114, 141, 633, 818, 1585
Tru9I	TTAA	5 cut(s)	114, 141, 633, 818, 1585
TscAI	CASTG	5 cut(s)	232, 370, 580, 588, 1474
TseFI	GTSAC	4 cut(s)	851, 861, 1043, 1192
TseI	GCWGC	5 cut(s)	146, 746, 917, 1034, 1199
Tsp45I	GTSAC	4 cut(s)	851, 861, 1043, 1192
TspDTI	ATGAA	4 cut(s)	17, 351, 455, 581
TspRI	CASTG	5 cut(s)	232, 370, 580, 588, 1474
Van91I	CCANNNNNTGG	1 cut(s)	806
VpaK11BI	GGWCC	3 cut(s)	290, 578, 603
VspI	ATTAAT	1 cut(s)	114
XapI	RAATTY	2 cut(s)	194, 1506
XhoI	CTCGAG	1 cut(s)	1408
XmaJI	CCTAGG	1 cut(s)	1273
XspI	CTAG	7 cut(s)	8, 371, 608, 1112, 1274, 1358, 1422
Zsp2I	ATGCAT	1 cut(s)	213

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.