Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0003979

Physical Location & Seq

Genomic Coordinates Forward (+)

18102685 .. 18107174

Gene Structure 4490 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G180400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2811 bp

ATGAATCTAGTTTGGGTCGTTTCAATACTCATTATCTGCATACCAGGCTCCACAGAAGGAGCCTCAAGACCTGCCGCCGTGAACGTTGGAGCTATGTGCACAGTAGGCACCATCAATGGAAGAGTCTCAAAGATTGCCATTGAGGCTGCTGTAAACGATGTGAACTCTGATCCAACCATTCTTGGTGGAACTAAATTATCTATAACTTTTCATGATTCAAACTTCAGTGGATTTCTTGGCATCATTGGAGCATTGAAGTTCATGGAGTCTGATACAGTAGCTATAATTGGTCCACAAACTGCTGTGATGGCTCATGTACTCTCACATCTTGCAAATGAACTTCATGTCCCTCTATTGTCATTCACAGCGCTGGACCCCACCTTATCAAGTCTGCAGTATCCTTACTTTGTTCAAACTGCACCCAATGATCTGTTCCAGATGGCTGCTATTGCAGACATGGTTAGTTATTTCGGTTGGACAGAGGTGGCTGCAATTTTCACTGATGATGACAGCGGTCGAAATGGTGTTGCTGCATTAGGTGATAAACTTGCAGAAAAACGCCACAAGATTTGTTACAAGGCAGCACTGCCACCTGAACCAAAAGCAACTAGAGATGATGTTAAAAATCAGTTGGTAATGATTCGAATGATGGAGTCTCGAGTGATTGTTCTACACACATTCGCCAAATCAGGTCTCGTAGTTTTTGATGTCGCCCAGGAACTTGGGATGATGGAGAGTGGATATGTATGGATAGCTACTGCTTGGCTATCCACTGTTTTAGATTCAACTTCACCGCTTTCTTCAAAGACTGCCAACTCTATCCAAGGTGCTCTCACTCTTAGACCACACACACCAGACTCAGAAAGAAAAAGGGCTTTTATATCAAGGTGGAACAAGTTGAGTAATGGCTCTATTGGGTTGAACCCTTATGGTCTATATGCCTATGACACTGTCTGGATGCTTGCTCATGCTATAAATTTGCTTTTGGATCAAGGGGGCACCATTTCCTTTTCCAACATCACTAGTCTAGGTGGTCCTAAGGGAGGAGGGACTGTGAACCTCGGTGCATTGAGCATTTTTCATGGTGGGAAGCAGTTGCTGGACAACATATTGCAAACCAATACCACCGGCCTGACTGGTCCTTTAGCATTTCATCCAGATAGATCTCCATTGAATCCTGCATATGATCTCATTAACATAATTGAAAATGGATATCAAAGAATTGGATACTGGTCTAACTATTCCGGGATATCTGTTGTGCCCCCTGAGACATCATCAAACCGGTCTACTTTGAACCAACACTTACACACTGTTGTATGGCCTGGAGGGACAACAGTCAAGCCTCGTGGGTGGGTTTTTCCAAACAATGGAAAGCAATTAAGAATTGGAGTACCAAATCGAGTTAGCTATCGAGACTTTGTATCACAAAGAAATGGTACTGATATAGTTGAAGGATACTGCATTGATATATTCCTTGCAGCTATAAAGTTGCTTCCATATGCAGTTCCATATGAGTTTGTTCTGTTTGGTGATGGTCTCAAGAACCCGAGCTACTACGATTTTGTAAAAATGATTGCATCAGGAAAGTTTGATGCTGCTGTAGGTGACATTGCCATTGTCACCAACCGGACAAAGATTGCGGATTTCACTCAGCCCTATATAGAGTCAGGGCTAGTTGTGGTGGCTCCAGTTAGGAGGTTAAATTCGAGAGCTTGGGCGTTCTTAAAGCCATTTAGTCCACTGATGTGGGGTGTCACAGCAGCTTTCTTCCTGATCATTGGATTAGTCATGTGGATTCTGGAACATAGAATAAATGATGAGTTCAGGGGTCCTCCTAGGAAACAGATTGTCACAATCTTATGGTTTAGCTTCTCTACCATGTTTTTTGCTCATAGAGAAAATACGGTGAGCACGCTAGGTCGGATGGTGCTGATCATCTGGCTTTTTATAGTTCTAATAATCAACTCAAGTTATACAGCTAGCCTGACATCAATGCTCACAGTACAACAACTAGAATCCCCCATTACTGGAATCGATACCTTGGTAACGAGCACCGAACCTATAGGATACCAAATAGGGTCTTTTGCTCAAAACTATTTGGTTGAGGAGCTCAACATCCCAAGATCTAGGCTAGTTCCTCTTGGCTCACCAGAAGCATATGCAGACGCCCTTAAGAAAAGAACTGTTGCTGCTGTGGTTGATGAAAAAGCATATATAGAACTCTTCCTCTCAGAAAACTGCATGTTCTCAATTAGGGGGCAGGAGTTCACCAAAAGCGGGTGGGGATTTGCATTTCCAAGAGACTCTCCTCTAGCCATTGACATGTCAACCGCCATTCTCACCCTATCGGAGAACGGCGATCTTCAGAAAATTCATGACAAATGGTTGTCAAGAAAATCCTGTGCACAGACCTCTGACCTCATATCAGACCAGCTTCAACCACAAAGCTTCTGGGGACTTTACCTTATCTGTGGCATTGCATGCCTTATTGCTCTCTTCATTCACTTTCTGTTGGCACTACGCCAGTTCAGCCGGCATTCCCCCGAAGCCGAAGATCAAACTGAGCCTTCCAGCCATAGCAGGAGAACCTCCCGCTCTGCGCGCCTCCACACGTTCCTGTCCTTCATCGACGAAAAAGCAGACGAATCGAAGAACAATAACAAGACAAAAAGAAAACGCAAGGAGATGATGGTATCAAATGGGAAGGAGAATTGTGAAAATGACTCGAGGAATATATCCAAGAGAATACAAATCAACAACTCTCAAGAGATACACAACAATGCTGACAATGACACTTGGCTAACTCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

937

Amino Acids

103.5

Weight (kDa)

7.64

Isoelectric Point (pI)

40.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003979)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17260 AT4G35290 AT4G35290 AT4G35290 AT4G35290 AT4G35290 AT4G35290
fragaria_vesca	FvH4_2g16810 FvH4_2g16810 FvH4_2g16810 FvH4_2g16810 FvH4_2g16810 FvH4_2g16810 FvH4_2g16810 FvH4_2g16810 FvH4_2g16810
malus_domestica	MD05G1139700.v1.1 MD10G1141900.v1.1
prunus_persica	Prupe.8G180400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0280931
rosa_laevigata	RLG00000013015
rosa_multiflora	Rmu_ssc0000288.1_g000001
rosa_roxburghii	Rroxscaffold_7G00187480
rosa_rugosa	Rorug06G0136800 Rorug06G0136900 Rorug06G0137000 Rorug06G0137000 Rorug06G0137000
rosa_samantha	Rh6AG249300 Rh6CG252000 Rh6DG243800
rosa_wichuraiana	Rw6G005260 Rw6G021570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	79
AccB1I	GGYRCC	2 cut(s)	107, 998
AccB7I	CCANNNNNTGG	1 cut(s)	1367
AccBSI	CCGCTC	1 cut(s)	2595
AccI	GTMKAC	1 cut(s)	1286
AccII	CGCG	1 cut(s)	2602
AciI	CCGC	7 cut(s)	75, 513, 794, 1640, 2277, 2331, 2593
AclI	AACGTT	1 cut(s)	84
AclWI	GGATC	2 cut(s)	164, 996
AcsI	RAATTY	3 cut(s)	976, 1702, 2370
AcuI	CTGAAG	2 cut(s)	208, 2348
AcyI	GRCGYC	1 cut(s)	2166
AfaI	GTAC	4 cut(s)	318, 1392, 1438, 2004
AfeI	AGCGCT	1 cut(s)	369
AfiI	CCNNNNNNNGG	4 cut(s)	1043, 1367, 2027, 2277
AflII	CTTAAG	1 cut(s)	2171
AflIII	ACRYGT	2 cut(s)	2322, 2610
AgeI	ACCGGT	1 cut(s)	1281
AhlI	ACTAGT	1 cut(s)	1022
AjnI	CCWGG	3 cut(s)	43, 714, 1321
AjuI	GAANNNNNNNTTGG	2 cut(s)	416, 448
AleI	CACNNNNGTG	1 cut(s)	1744
AloI	GAACNNNNNNTCC	2 cut(s)	330, 362
Alw21I	GWGCWC	6 cut(s)	101, 832, 1913, 2054, 2112, 2407
Alw26I	GTCTC	7 cut(s)	130, 660, 698, 1262, 1407, 1541, 2295
Alw44I	GTGCAC	2 cut(s)	97, 2403
AlwI	GGATC	2 cut(s)	164, 996
AlwNI	CAGNNNCTG	1 cut(s)	1099
Ama87I	CYCGRG	3 cut(s)	657, 1546, 2725
Aor51HI	AGCGCT	1 cut(s)	369
AoxI	GGCC	2 cut(s)	1129, 1319
ApaLI	GTGCAC	2 cut(s)	97, 2403
ApeKI	GCWGC	9 cut(s)	146, 443, 488, 530, 581, 1478, 1595, 1760, 2189
ApoI	RAATTY	3 cut(s)	976, 1702, 2370
AsiGI	ACCGGT	1 cut(s)	1281
AspA2I	CCTAGG	1 cut(s)	1835
AspLEI	GCGC	3 cut(s)	370, 2602, 2604
AspS9I	GGNCC	5 cut(s)	290, 373, 1034, 1139, 1829
AsuC2I	CCSGG	1 cut(s)	1246
AsuHPI	GGTGA	9 cut(s)	551, 783, 1541, 1612, 1616, 1918, 2139, 2260, 2332
AsuII	TTCGAA	1 cut(s)	643
AsuNHI	GCTAGC	1 cut(s)	1979
AvaI	CYCGRG	3 cut(s)	657, 1546, 2725
AvaII	GGWCC	5 cut(s)	290, 373, 1034, 1139, 1829
AvrII	CCTAGG	1 cut(s)	1835
AxyI	CCTNAGG	1 cut(s)	1038
BaeGI	GKGCMC	4 cut(s)	101, 1001, 1263, 2407
BaeI	ACNNNNGTAYC	2 cut(s)	2028, 2061
BanI	GGYRCC	2 cut(s)	107, 998
BanII	GRGCYC	1 cut(s)	2112
BauI	CACGAG	1 cut(s)	1344
Bbv12I	GWGCWC	6 cut(s)	101, 832, 1913, 2054, 2112, 2407
BbvI	GCAGC	9 cut(s)	133, 430, 475, 517, 593, 1490, 1582, 1772, 2176
BccI	CCATC	8 cut(s)	119, 301, 433, 643, 724, 1526, 1918, 2683
BceAI	ACGGC	2 cut(s)	62, 2371
BcgI	CGANNNNNNTGC	2 cut(s)	2628, 2662
BciT130I	CCWGG	3 cut(s)	45, 716, 1323
BciVI	GTATCC	4 cut(s)	408, 1220, 1448, 2060
BclI	TGATCA	2 cut(s)	1773, 1932
BcnI	CCSGG	1 cut(s)	1246
BcoDI	GTCTC	7 cut(s)	130, 660, 698, 1262, 1407, 1541, 2295
BcuI	ACTAGT	1 cut(s)	1022
BfmI	CTRYAG	3 cut(s)	392, 1599, 2061
BfoI	RGCGCY	1 cut(s)	371
BfrI	CTTAAG	1 cut(s)	2171
BfuAI	ACCTGC	1 cut(s)	79
BfuI	GTATCC	4 cut(s)	408, 1220, 1448, 2060
BglI	GCCNNNNNGGC	1 cut(s)	143
BglII	AGATCT	2 cut(s)	1163, 2123
BlnI	CCTAGG	1 cut(s)	1835
Bme1390I	CCNGG	4 cut(s)	45, 716, 1246, 1323
Bme18I	GGWCC	5 cut(s)	290, 373, 1034, 1139, 1829
BmeT110I	CYCGRG	3 cut(s)	657, 1546, 2725
BmgT120I	GGNCC	5 cut(s)	290, 373, 1034, 1139, 1829
BmiI	GGNNCC	7 cut(s)	49, 61, 109, 375, 1000, 1686, 1830
BmrFI	CCNGG	4 cut(s)	45, 716, 1246, 1323
BmsI	GCATC	4 cut(s)	249, 948, 1582, 1586
BmtI	GCTAGC	1 cut(s)	1983
BoxI	GACNNNNGTC	2 cut(s)	513, 1334
BpmI	CTGGAG	2 cut(s)	1344, 1671
Bpu14I	TTCGAA	1 cut(s)	643
BpuEI	CTTGAG	4 cut(s)	49, 1523, 1951, 2748
BpuMI	CCSGG	1 cut(s)	1246
Bsa29I	ATCGAT	1 cut(s)	2034
BsaHI	GRCGYC	1 cut(s)	2166
BsaI	GGTCTC	2 cut(s)	698, 1541
BsaJI	CCNNGG	5 cut(s)	714, 823, 1060, 1835, 2040
BsaWI	WCCGGW	2 cut(s)	1281, 1626
BsaXI	ACNNNNNCTCC	2 cut(s)	1038, 1068
Bsc4I	CCNNNNNNNGG	4 cut(s)	1043, 1367, 2027, 2277
Bse118I	RCCGGY	3 cut(s)	1127, 1281, 2532
Bse1I	ACTGG	5 cut(s)	1141, 1235, 1688, 2032, 2524
Bse21I	CCTNAGG	1 cut(s)	1038
Bse3DI	GCAATG	2 cut(s)	1608, 2475
BseBI	CCWGG	3 cut(s)	45, 716, 1323
BseCI	ATCGAT	1 cut(s)	2034
BseDI	CCNNGG	5 cut(s)	714, 823, 1060, 1835, 2040
BseGI	GGATG	5 cut(s)	732, 963, 1153, 1929, 2115
BseLI	CCNNNNNNNGG	4 cut(s)	1043, 1367, 2027, 2277
BseMI	GCAATG	2 cut(s)	1608, 2475
BseMII	CTCAG	5 cut(s)	873, 1257, 1664, 2244, 2553
BseNI	ACTGG	5 cut(s)	1141, 1235, 1688, 2032, 2524
BsePI	GCGCGC	1 cut(s)	2600
BseRI	GAGGAG	3 cut(s)	1059, 2120, 2298
BseSI	GKGCMC	4 cut(s)	101, 1001, 1263, 2407
BseXI	GCAGC	9 cut(s)	133, 430, 475, 517, 593, 1490, 1582, 1772, 2176
BsgI	GTGCAG	1 cut(s)	402
Bsh1236I	CGCG	1 cut(s)	2602
Bsh1285I	CGRYCG	1 cut(s)	517
BshFI	GGCC	2 cut(s)	1131, 1321
BshNI	GGYRCC	2 cut(s)	107, 998
BshTI	ACCGGT	1 cut(s)	1281
BshVI	ATCGAT	1 cut(s)	2034
BsiEI	CGRYCG	1 cut(s)	517
BsiHKAI	GWGCWC	6 cut(s)	101, 832, 1913, 2054, 2112, 2407
BsiHKCI	CYCGRG	3 cut(s)	657, 1546, 2725
BsiSI	CCGG	5 cut(s)	1128, 1245, 1282, 1627, 2533
BslFI	GGGAC	4 cut(s)	332, 1063, 1342, 2469
BslI	CCNNNNNNNGG	4 cut(s)	1043, 1367, 2027, 2277
BsmAI	GTCTC	7 cut(s)	130, 660, 698, 1262, 1407, 1541, 2295
BsmFI	GGGAC	4 cut(s)	332, 1063, 1342, 2469
BsmI	GAATGC	1 cut(s)	2536
BsnI	GGCC	2 cut(s)	1131, 1321
Bso31I	GGTCTC	2 cut(s)	698, 1541
BsoBI	CYCGRG	3 cut(s)	657, 1546, 2725
Bsp119I	TTCGAA	1 cut(s)	643
Bsp1286I	GDGCHC	8 cut(s)	101, 832, 1001, 1263, 1913, 2054, 2112, 2407
BspACI	CCGC	7 cut(s)	75, 513, 794, 1640, 2277, 2331, 2593
BspANI	GGCC	2 cut(s)	1131, 1321
BspCNI	CTCAG	5 cut(s)	872, 1258, 1663, 2243, 2554
BspDI	ATCGAT	1 cut(s)	2034
BspFNI	CGCG	1 cut(s)	2602
BspHI	TCATGA	2 cut(s)	211, 2374
BspLI	GGNNCC	7 cut(s)	49, 61, 109, 375, 1000, 1686, 1830
BspMAI	CTGCAG	1 cut(s)	396
BspMI	ACCTGC	1 cut(s)	79
BspOI	GCTAGC	1 cut(s)	1983
BspPI	GGATC	2 cut(s)	164, 996
BspT104I	TTCGAA	1 cut(s)	643
BspT107I	GGYRCC	2 cut(s)	107, 998
BspTI	CTTAAG	1 cut(s)	2171
BspTNI	GGTCTC	2 cut(s)	698, 1541
BsrBI	CCGCTC	1 cut(s)	2595
BsrDI	GCAATG	2 cut(s)	1608, 2475
BsrFI	RCCGGY	3 cut(s)	1127, 1281, 2532
BsrI	ACTGG	5 cut(s)	1141, 1235, 1688, 2032, 2524
BssAI	RCCGGY	3 cut(s)	1127, 1281, 2532
BssECI	CCNNGG	5 cut(s)	714, 823, 1060, 1835, 2040
BssHII	GCGCGC	1 cut(s)	2600
BssNI	GRCGYC	1 cut(s)	2166
BssSI	CACGAG	1 cut(s)	1344
BssT1I	CCWWGG	3 cut(s)	823, 1835, 2040
Bst2BI	CACGAG	1 cut(s)	1344
Bst2UI	CCWGG	3 cut(s)	45, 716, 1323
Bst6I	CTCTTC	3 cut(s)	115, 2228, 2501
BstACI	GRCGYC	1 cut(s)	2166
BstAFI	CTTAAG	1 cut(s)	2171
BstAPI	GCANNNNNTGC	1 cut(s)	2481
BstBI	TTCGAA	1 cut(s)	643
BstC8I	GCNNGC	6 cut(s)	963, 1913, 1981, 2482, 2534, 2602
BstDEI	CTNAG	7 cut(s)	839, 859, 1038, 1266, 1650, 2230, 2562
BstENI	CCTNNNNNAGG	1 cut(s)	1041
BstF5I	GGATG	5 cut(s)	732, 963, 1153, 1929, 2115
BstFNI	CGCG	1 cut(s)	2602
BstH2I	RGCGCY	1 cut(s)	371
BstHHI	GCGC	3 cut(s)	370, 2602, 2604
BstMAI	GTCTC	7 cut(s)	130, 660, 698, 1262, 1407, 1541, 2295
BstMCI	CGRYCG	1 cut(s)	517
BstMWI	GCNNNNNNNGC	8 cut(s)	45, 105, 143, 308, 449, 2481, 2529, 2601
BstNI	CCWGG	3 cut(s)	45, 716, 1323
BstNSI	RCATGY	3 cut(s)	2245, 2326, 2484
BstPAI	GACNNNNGTC	2 cut(s)	513, 1334
BstSCI	CCNGG	4 cut(s)	43, 714, 1244, 1321
BstSFI	CTRYAG	3 cut(s)	392, 1599, 2061
BstSLI	GKGCMC	4 cut(s)	101, 1001, 1263, 2407
BstUI	CGCG	1 cut(s)	2602
BstV1I	GCAGC	9 cut(s)	133, 430, 475, 517, 593, 1490, 1582, 1772, 2176
BstX2I	RGATCY	2 cut(s)	1163, 2123
BstXI	CCANNNNNNTGG	2 cut(s)	722, 1746
BstYI	RGATCY	2 cut(s)	1163, 2123
Bsu15I	ATCGAT	1 cut(s)	2034
Bsu36I	CCTNAGG	1 cut(s)	1038
BsuI	GTATCC	4 cut(s)	408, 1220, 1448, 2060
BsuRI	GGCC	2 cut(s)	1131, 1321
BsuTUI	ATCGAT	1 cut(s)	2034
BtsCI	GGATG	5 cut(s)	732, 963, 1153, 1929, 2115
BtsI	GCAGTG	1 cut(s)	584
BtsIMutI	CAGTG	7 cut(s)	232, 498, 584, 771, 948, 1308, 1739
BveI	ACCTGC	1 cut(s)	79
Cac8I	GCNNGC	6 cut(s)	963, 1913, 1981, 2482, 2534, 2602
CaiI	CAGNNNCTG	1 cut(s)	1099
CciI	TCATGA	2 cut(s)	211, 2374
CfoI	GCGC	3 cut(s)	370, 2602, 2604
Cfr10I	RCCGGY	3 cut(s)	1127, 1281, 2532
Cfr13I	GGNCC	5 cut(s)	290, 373, 1034, 1139, 1829
ClaI	ATCGAT	1 cut(s)	2034
CseI	GACGC	1 cut(s)	2174
Csp6I	GTAC	4 cut(s)	317, 1391, 1437, 2003
CspAI	ACCGGT	1 cut(s)	1281
CspCI	CAANNNNNGTGG	4 cut(s)	551, 586, 1327, 1362
CviQI	GTAC	4 cut(s)	317, 1391, 1437, 2003
DdeI	CTNAG	7 cut(s)	839, 859, 1038, 1266, 1650, 2230, 2562
Eam1104I	CTCTTC	3 cut(s)	115, 2228, 2501
EarI	CTCTTC	3 cut(s)	115, 2228, 2501
Ecl136II	GAGCTC	1 cut(s)	2110
Eco130I	CCWWGG	3 cut(s)	823, 1835, 2040
Eco24I	GRGCYC	1 cut(s)	2112
Eco31I	GGTCTC	2 cut(s)	698, 1541
Eco32I	GATATC	2 cut(s)	1214, 1251
Eco47I	GGWCC	5 cut(s)	290, 373, 1034, 1139, 1829
Eco47III	AGCGCT	1 cut(s)	369
Eco53kI	GAGCTC	1 cut(s)	2110
Eco57I	CTGAAG	2 cut(s)	208, 2348
Eco81I	CCTNAGG	1 cut(s)	1038
Eco88I	CYCGRG	3 cut(s)	657, 1546, 2725
EcoICRI	GAGCTC	1 cut(s)	2110
EcoNI	CCTNNNNNAGG	1 cut(s)	1041
EcoO109I	RGGNCCY	1 cut(s)	1829
EcoRII	CCWGG	3 cut(s)	43, 714, 1321
EcoRV	GATATC	2 cut(s)	1214, 1251
EcoT14I	CCWWGG	3 cut(s)	823, 1835, 2040
EcoT38I	GRGCYC	1 cut(s)	2112
ErhI	CCWWGG	3 cut(s)	823, 1835, 2040
FaqI	GGGAC	4 cut(s)	332, 1063, 1342, 2469
FauI	CCCGC	2 cut(s)	2270, 2600
FauNDI	CATATG	4 cut(s)	1183, 1498, 1510, 2158
FbaI	TGATCA	2 cut(s)	1773, 1932
FblI	GTMKAC	1 cut(s)	1286
FokI	GGATG	5 cut(s)	739, 970, 1140, 1936, 2102
FriOI	GRGCYC	1 cut(s)	2112
GlaI	GCGC	3 cut(s)	369, 2601, 2603
GsuI	CTGGAG	2 cut(s)	1344, 1671
HaeII	RGCGCY	1 cut(s)	371
HaeIII	GGCC	2 cut(s)	1131, 1321
HapII	CCGG	5 cut(s)	1128, 1245, 1282, 1627, 2533
HgaI	GACGC	1 cut(s)	2174
HhaI	GCGC	3 cut(s)	370, 2602, 2604
Hin1I	GRCGYC	1 cut(s)	2166
Hin6I	GCGC	3 cut(s)	368, 2600, 2602
HinP1I	GCGC	3 cut(s)	368, 2600, 2602
HincII	GTYRAC	1 cut(s)	2328
HindII	GTYRAC	1 cut(s)	2328
HindIII	AAGCTT	1 cut(s)	2446
HpaII	CCGG	5 cut(s)	1128, 1245, 1282, 1627, 2533
HphI	GGTGA	9 cut(s)	551, 783, 1541, 1612, 1616, 1918, 2139, 2260, 2332
Hpy188I	TCNGA	9 cut(s)	169, 271, 862, 1923, 2233, 2350, 2367, 2416, 2428
Hpy99I	CGWCG	1 cut(s)	2633
HpyAV	CCTTC	5 cut(s)	50, 1445, 2577, 2632, 2698
HpyCH4IV	ACGT	2 cut(s)	84, 2612
HpyF10VI	GCNNNNNNNGC	8 cut(s)	45, 105, 143, 308, 449, 2481, 2529, 2601
HpyF3I	CTNAG	7 cut(s)	839, 859, 1038, 1266, 1650, 2230, 2562
HpySE526I	ACGT	2 cut(s)	84, 2612
Hsp92I	GRCGYC	1 cut(s)	2166
HspAI	GCGC	3 cut(s)	368, 2600, 2602
KroI	GCCGGC	1 cut(s)	2532
KroNI	GCCGGC	1 cut(s)	2534
Ksp22I	TGATCA	2 cut(s)	1773, 1932
LmnI	GCTCC	6 cut(s)	53, 59, 89, 248, 1690, 2107
Lsp1109I	GCAGC	9 cut(s)	133, 430, 475, 517, 593, 1490, 1582, 1772, 2176
LweI	GCATC	4 cut(s)	249, 948, 1582, 1586
MaeII	ACGT	2 cut(s)	84, 2612
MaeIII	GTNAC	6 cut(s)	572, 1604, 1618, 1753, 1849, 2044
MbiI	CCGCTC	1 cut(s)	2595
MboII	GAAGA	8 cut(s)	132, 792, 1759, 2215, 2354, 2488, 2564, 2662
MflI	RGATCY	2 cut(s)	1163, 2123
MhlI	GDGCHC	8 cut(s)	101, 832, 1001, 1263, 1913, 2054, 2112, 2407
MlyI	GAGTC	7 cut(s)	132, 275, 662, 851, 1673, 2297, 2717
MmeI	TCCRAC	5 cut(s)	67, 197, 455, 1038, 1901
MroNI	GCCGGC	1 cut(s)	2532
MseI	TTAA	7 cut(s)	621, 1194, 1379, 1700, 1724, 2172, 2809
MslI	CAYNNNNRTG	3 cut(s)	1744, 2321, 2778
MspA1I	CMGCKG	1 cut(s)	513
MspCI	CTTAAG	1 cut(s)	2171
MspI	CCGG	5 cut(s)	1128, 1245, 1282, 1627, 2533
MspR9I	CCNGG	4 cut(s)	45, 716, 1246, 1323
Mva1269I	GAATGC	1 cut(s)	2536
MvaI	CCWGG	3 cut(s)	45, 716, 1323
MvnI	CGCG	1 cut(s)	2602
MwoI	GCNNNNNNNGC	8 cut(s)	45, 105, 143, 308, 449, 2481, 2529, 2601
NaeI	GCCGGC	1 cut(s)	2534
NciI	CCSGG	1 cut(s)	1246
NdeI	CATATG	4 cut(s)	1183, 1498, 1510, 2158
NgoMIV	GCCGGC	1 cut(s)	2532
NheI	GCTAGC	1 cut(s)	1979
NlaIV	GGNNCC	7 cut(s)	49, 61, 109, 375, 1000, 1686, 1830
NmuCI	GTSAC	4 cut(s)	1604, 1618, 1753, 1849
NspI	RCATGY	3 cut(s)	2245, 2326, 2484
NspV	TTCGAA	1 cut(s)	643
OliI	CACNNNNGTG	1 cut(s)	1744
PaeI	GCATGC	1 cut(s)	2484
PaeR7I	CTCGAG	2 cut(s)	657, 2725
PagI	TCATGA	2 cut(s)	211, 2374
PauI	GCGCGC	1 cut(s)	2600
PciI	ACATGT	1 cut(s)	2322
PctI	GAATGC	1 cut(s)	2536
PdiI	GCCGGC	1 cut(s)	2534
PfeI	GAWTC	9 cut(s)	4, 215, 640, 782, 1174, 1795, 2015, 2031, 2645
PflFI	GACNNNGTC	1 cut(s)	950
PflMI	CCANNNNNTGG	1 cut(s)	1367
PfoI	TCCNGGA	1 cut(s)	1244
PinAI	ACCGGT	1 cut(s)	1281
PleI	GAGTC	7 cut(s)	131, 274, 661, 851, 1672, 2297, 2717
PpsI	GAGTC	7 cut(s)	131, 274, 661, 851, 1672, 2297, 2717
PpuMI	RGGWCCY	1 cut(s)	1829
PscI	ACATGT	1 cut(s)	2322
PshAI	GACNNNNGTC	2 cut(s)	513, 1334
Psp124BI	GAGCTC	1 cut(s)	2112
Psp1406I	AACGTT	1 cut(s)	84
Psp5II	RGGWCCY	1 cut(s)	1829
Psp6I	CCWGG	3 cut(s)	43, 714, 1321
PspGI	CCWGG	3 cut(s)	43, 714, 1321
PspN4I	GGNNCC	7 cut(s)	49, 61, 109, 375, 1000, 1686, 1830
PspPI	GGNCC	5 cut(s)	290, 373, 1034, 1139, 1829
PspPPI	RGGWCCY	1 cut(s)	1829
PspXI	VCTCGAGB	1 cut(s)	2725
PsrI	GAACNNNNNNTAC	2 cut(s)	1535, 1567
PstI	CTGCAG	1 cut(s)	396
PstNI	CAGNNNCTG	1 cut(s)	1099
PsuI	RGATCY	2 cut(s)	1163, 2123
PsyI	GACNNNGTC	1 cut(s)	950
PteI	GCGCGC	1 cut(s)	2600
RsaI	GTAC	4 cut(s)	318, 1392, 1438, 2004
RsaNI	GTAC	4 cut(s)	317, 1391, 1437, 2003
RseI	CAYNNNNRTG	3 cut(s)	1744, 2321, 2778
SacI	GAGCTC	1 cut(s)	2112
SaqAI	TTAA	7 cut(s)	621, 1194, 1379, 1700, 1724, 2172, 2809
Sau96I	GGNCC	5 cut(s)	290, 373, 1034, 1139, 1829
SchI	GAGTC	7 cut(s)	132, 275, 662, 851, 1673, 2297, 2717
ScrFI	CCNGG	4 cut(s)	45, 716, 1246, 1323
SduI	GDGCHC	8 cut(s)	101, 832, 1001, 1263, 1913, 2054, 2112, 2407
SfaNI	GCATC	4 cut(s)	249, 948, 1582, 1586
SfcI	CTRYAG	3 cut(s)	392, 1599, 2061
Sfr274I	CTCGAG	2 cut(s)	657, 2725
SfuI	TTCGAA	1 cut(s)	643
SinI	GGWCC	5 cut(s)	290, 373, 1034, 1139, 1829
SlaI	CTCGAG	2 cut(s)	657, 2725
SmiMI	CAYNNNNRTG	3 cut(s)	1744, 2321, 2778
SmlI	CTYRAG	7 cut(s)	64, 657, 1538, 1966, 2171, 2725, 2763
SmoI	CTYRAG	7 cut(s)	64, 657, 1538, 1966, 2171, 2725, 2763
SpeI	ACTAGT	1 cut(s)	1022
SphI	GCATGC	1 cut(s)	2484
SsiI	CCGC	7 cut(s)	75, 513, 794, 1640, 2277, 2331, 2593
SstI	GAGCTC	1 cut(s)	2112
StyD4I	CCNGG	4 cut(s)	43, 714, 1244, 1321
StyI	CCWWGG	3 cut(s)	823, 1835, 2040
TaiI	ACGT	2 cut(s)	87, 2615
TatI	WGTACW	2 cut(s)	316, 2002
TauI	GCSGC	1 cut(s)	77
TfiI	GAWTC	9 cut(s)	4, 215, 640, 782, 1174, 1795, 2015, 2031, 2645
Tru1I	TTAA	7 cut(s)	621, 1194, 1379, 1700, 1724, 2172, 2809
Tru9I	TTAA	7 cut(s)	621, 1194, 1379, 1700, 1724, 2172, 2809
TscAI	CASTG	7 cut(s)	232, 505, 591, 778, 955, 1315, 1746
TseFI	GTSAC	4 cut(s)	1604, 1618, 1753, 1849
TseI	GCWGC	9 cut(s)	146, 443, 488, 530, 581, 1478, 1595, 1760, 2189
Tsp45I	GTSAC	4 cut(s)	1604, 1618, 1753, 1849
TspRI	CASTG	7 cut(s)	232, 505, 591, 778, 955, 1315, 1746
Tth111I	GACNNNGTC	1 cut(s)	950
Van91I	CCANNNNNTGG	1 cut(s)	1367
Vha464I	CTTAAG	1 cut(s)	2171
VneI	GTGCAC	2 cut(s)	97, 2403
VpaK11BI	GGWCC	5 cut(s)	290, 373, 1034, 1139, 1829
XagI	CCTNNNNNAGG	1 cut(s)	1041
XapI	RAATTY	3 cut(s)	976, 1702, 2370
XceI	RCATGY	3 cut(s)	2245, 2326, 2484
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2448
XhoI	CTCGAG	2 cut(s)	657, 2725
XmaJI	CCTAGG	1 cut(s)	1835
XmiI	GTMKAC	1 cut(s)	1286

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.