Ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G02880 AT5G02880 |
| fragaria_vesca | FvH4_6g15270 FvH4_6g15270 FvH4_6g15270 FvH4_6g15270 |
| malus_domestica | MD04G1104600.v1.1 MD12G1124500.v1.1 |
| prunus_persica | Prupe.6G241700_v2.0.a1 Prupe.6G241700_v2.0.a1 |
| pyrus_communis | pycom12g12310 |
| rosa_chinensis | RchiOBHm_Chr3g0468671 |
| rosa_laevigata | RLG00000024416 |
| rosa_multiflora | Rmu_sc0011538.1_g000007 |
| rosa_roxburghii | Rroxscaffold_6G00412660 |
| rosa_rugosa | Rorug03G0096200 |
| rosa_samantha | Rh3AG145000 Rh3BG167500 Rh3DG166300 |
| rosa_wichuraiana | Rw3G013670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1580 |
| AbsI | CCTCGAGG | 1 cut(s) | 3992 |
| Acc16I | TGCGCA | 1 cut(s) | 1905 |
| Acc36I | ACCTGC | 2 cut(s) | 55, 3158 |
| Acc65I | GGTACC | 1 cut(s) | 2647 |
| AccB1I | GGYRCC | 1 cut(s) | 2647 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 1951, 2099, 3320, 3412 |
| AccBSI | CCGCTC | 1 cut(s) | 2004 |
| AccI | GTMKAC | 2 cut(s) | 1029, 1764 |
| AccII | CGCG | 2 cut(s) | 1601, 3310 |
| AccIII | TCCGGA | 2 cut(s) | 95, 3857 |
| AciI | CCGC | 8 cut(s) | 557, 1006, 1532, 2004, 2252, 2645, 3153, 4354 |
| AclI | AACGTT | 2 cut(s) | 147, 1091 |
| AcoI | YGGCCR | 1 cut(s) | 450 |
| AcuI | CTGAAG | 9 cut(s) | 272, 447, 1232, 1469, 2930, 3570, 3861, 4359, 4439 |
| AcyI | GRCGYC | 1 cut(s) | 4325 |
| AdeI | CACNNNGTG | 1 cut(s) | 3851 |
| AfaI | GTAC | 6 cut(s) | 629, 1893, 2649, 3057, 3616, 3819 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 1216, 1951, 2099, 3320, 3412, 3512, 3611, 4316 |
| AflII | CTTAAG | 2 cut(s) | 1615, 2951 |
| AflIII | ACRYGT | 2 cut(s) | 1461, 1778 |
| AgeI | ACCGGT | 1 cut(s) | 466 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 878, 2536 |
| AhlI | ACTAGT | 1 cut(s) | 2276 |
| AjnI | CCWGG | 5 cut(s) | 133, 386, 2593, 2836, 3928 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 4157, 4189 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 90, 122 |
| Alw26I | GTCTC | 7 cut(s) | 342, 816, 1317, 2315, 2556, 2672, 4332 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 3320, 4243, 4382 |
| Ama87I | CYCGRG | 3 cut(s) | 675, 3565, 3992 |
| Aor13HI | TCCGGA | 2 cut(s) | 95, 3857 |
| AoxI | GGCC | 4 cut(s) | 13, 450, 2402, 3458 |
| ApeKI | GCWGC | 8 cut(s) | 796, 3118, 3121, 3239, 3377, 3637, 3863, 4212 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2646, 2678, 3752, 3784 |
| AseI | ATTAAT | 3 cut(s) | 972, 3009, 3731 |
| AsiGI | ACCGGT | 1 cut(s) | 466 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 1281, 1539, 1928, 3363, 4059, 4098 |
| Asp718I | GGTACC | 1 cut(s) | 2647 |
| AspLEI | GCGC | 5 cut(s) | 1906, 2907, 3310, 3312, 4409 |
| AspS9I | GGNCC | 5 cut(s) | 1802, 2072, 2771, 3458, 3904 |
| AsuC2I | CCSGG | 1 cut(s) | 4303 |
| AsuHPI | GGTGA | 9 cut(s) | 329, 456, 924, 1231, 1233, 1442, 2978, 3032, 3863 |
| AsuII | TTCGAA | 1 cut(s) | 2759 |
| AvaI | CYCGRG | 3 cut(s) | 675, 3565, 3992 |
| AvaII | GGWCC | 4 cut(s) | 1802, 2072, 2771, 3904 |
| AxyI | CCTNAGG | 1 cut(s) | 1806 |
| BalI | TGGCCA | 1 cut(s) | 452 |
| BamHI | GGATCC | 1 cut(s) | 4038 |
| BanI | GGYRCC | 1 cut(s) | 2647 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 4357, 4389 |
| BauI | CACGAG | 1 cut(s) | 2817 |
| BbsI | GAAGAC | 2 cut(s) | 1155, 2532 |
| BbvI | GCAGC | 8 cut(s) | 808, 3130, 3133, 3251, 3364, 3624, 3875, 4224 |
| BccI | CCATC | 4 cut(s) | 2135, 3382, 3680, 4506 |
| BceAI | ACGGC | 2 cut(s) | 544, 3339 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 708, 742, 2701, 2735, 3107, 3141 |
| BciT130I | CCWGG | 5 cut(s) | 135, 388, 2595, 2838, 3930 |
| BciVI | GTATCC | 1 cut(s) | 157 |
| BclI | TGATCA | 2 cut(s) | 319, 4192 |
| BcnI | CCSGG | 1 cut(s) | 4303 |
| BcoDI | GTCTC | 7 cut(s) | 342, 816, 1317, 2315, 2556, 2672, 4332 |
| BcuI | ACTAGT | 1 cut(s) | 2276 |
| BfaI | CTAG | 7 cut(s) | 2277, 2652, 2684, 3032, 3368, 4209, 4392 |
| BfmI | CTRYAG | 5 cut(s) | 1114, 1523, 2424, 2454, 3638 |
| BfrI | CTTAAG | 2 cut(s) | 1615, 2951 |
| BfuAI | ACCTGC | 2 cut(s) | 55, 3158 |
| BfuI | GTATCC | 1 cut(s) | 157 |
| BlpI | GCTNAGC | 2 cut(s) | 486, 642 |
| BmcAI | AGTACT | 1 cut(s) | 629 |
| Bme1390I | CCNGG | 6 cut(s) | 135, 388, 2595, 2838, 3930, 4303 |
| Bme18I | GGWCC | 4 cut(s) | 1802, 2072, 2771, 3904 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 878, 2536 |
| BmeT110I | CYCGRG | 3 cut(s) | 675, 3565, 3992 |
| BmgT120I | GGNCC | 5 cut(s) | 1802, 2072, 2771, 3458, 3904 |
| BmiI | GGNNCC | 6 cut(s) | 1943, 2073, 2649, 2773, 4040, 4492 |
| BmrFI | CCNGG | 6 cut(s) | 135, 388, 2595, 2838, 3930, 4303 |
| BmrI | ACTGGG | 1 cut(s) | 3308 |
| BmsI | GCATC | 7 cut(s) | 820, 1274, 1891, 2371, 2536, 2632, 3587 |
| BmuI | ACTGGG | 1 cut(s) | 3308 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1838, 3909 |
| BpiI | GAAGAC | 2 cut(s) | 1155, 2532 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 800, 832 |
| BpmI | CTGGAG | 5 cut(s) | 378, 726, 1380, 2981, 3488 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2219, 3281 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 486, 642 |
| Bpu14I | TTCGAA | 1 cut(s) | 2759 |
| BpuEI | CTTGAG | 7 cut(s) | 99, 683, 1438, 1565, 1838, 2497, 2553 |
| BpuMI | CCSGG | 1 cut(s) | 4303 |
| BsaAI | YACGTR | 3 cut(s) | 1140, 1781, 3821 |
| BsaBI | GATNNNNATC | 5 cut(s) | 129, 552, 1720, 2859, 3945 |
| BsaHI | GRCGYC | 1 cut(s) | 4325 |
| BsaJI | CCNNGG | 5 cut(s) | 272, 3164, 3605, 3886, 4301 |
| BsaWI | WCCGGW | 4 cut(s) | 95, 466, 1427, 3857 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1353, 1383, 2160, 2190, 4282, 4312 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 1216, 1951, 2099, 3320, 3412, 3512, 3611, 4316 |
| Bse118I | RCCGGY | 3 cut(s) | 466, 685, 934 |
| Bse21I | CCTNAGG | 1 cut(s) | 1806 |
| Bse3DI | GCAATG | 2 cut(s) | 945, 3923 |
| Bse8I | GATNNNNATC | 5 cut(s) | 129, 552, 1720, 2859, 3945 |
| BseAI | TCCGGA | 2 cut(s) | 95, 3857 |
| BseBI | CCWGG | 5 cut(s) | 135, 388, 2595, 2838, 3930 |
| BseDI | CCNNGG | 5 cut(s) | 272, 3164, 3605, 3886, 4301 |
| BseJI | GATNNNNATC | 5 cut(s) | 129, 552, 1720, 2859, 3945 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 1216, 1951, 2099, 3320, 3412, 3512, 3611, 4316 |
| BseMI | GCAATG | 2 cut(s) | 945, 3923 |
| BsePI | GCGCGC | 1 cut(s) | 3308 |
| BseRI | GAGGAG | 4 cut(s) | 506, 2605, 2617, 4133 |
| BseXI | GCAGC | 8 cut(s) | 808, 3130, 3133, 3251, 3364, 3624, 3875, 4224 |
| BsgI | GTGCAG | 1 cut(s) | 2784 |
| Bsh1236I | CGCG | 2 cut(s) | 1601, 3310 |
| BshFI | GGCC | 4 cut(s) | 15, 452, 2404, 3460 |
| BshNI | GGYRCC | 1 cut(s) | 2647 |
| BshTI | ACCGGT | 1 cut(s) | 466 |
| BsiHKCI | CYCGRG | 3 cut(s) | 675, 3565, 3992 |
| BsiSI | CCGG | 7 cut(s) | 96, 467, 686, 935, 1428, 3858, 4303 |
| BslFI | GGGAC | 3 cut(s) | 3460, 3673, 4320 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 1216, 1951, 2099, 3320, 3412, 3512, 3611, 4316 |
| BsmAI | GTCTC | 7 cut(s) | 342, 816, 1317, 2315, 2556, 2672, 4332 |
| BsmBI | CGTCTC | 3 cut(s) | 2556, 2672, 4332 |
| BsmFI | GGGAC | 3 cut(s) | 3460, 3673, 4320 |
| BsmI | GAATGC | 4 cut(s) | 706, 1053, 1482, 2611 |
| BsnI | GGCC | 4 cut(s) | 15, 452, 2404, 3460 |
| BsoBI | CYCGRG | 3 cut(s) | 675, 3565, 3992 |
| Bsp119I | TTCGAA | 1 cut(s) | 2759 |
| Bsp13I | TCCGGA | 2 cut(s) | 95, 3857 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 486, 642 |
| Bsp19I | CCATGG | 2 cut(s) | 3164, 3886 |
| Bsp68I | TCGCGA | 1 cut(s) | 1601 |
| BspACI | CCGC | 8 cut(s) | 557, 1006, 1532, 2004, 2252, 2645, 3153, 4354 |
| BspANI | GGCC | 4 cut(s) | 15, 452, 2404, 3460 |
| BspEI | TCCGGA | 2 cut(s) | 95, 3857 |
| BspFNI | CGCG | 2 cut(s) | 1601, 3310 |
| BspHI | TCATGA | 1 cut(s) | 1338 |
| BspLI | GGNNCC | 6 cut(s) | 1943, 2073, 2649, 2773, 4040, 4492 |
| BspMAI | CTGCAG | 1 cut(s) | 3642 |
| BspMI | ACCTGC | 2 cut(s) | 55, 3158 |
| BspQI | GCTCTTC | 1 cut(s) | 210 |
| BspT104I | TTCGAA | 1 cut(s) | 2759 |
| BspT107I | GGYRCC | 1 cut(s) | 2647 |
| BspTI | CTTAAG | 2 cut(s) | 1615, 2951 |
| BsrBI | CCGCTC | 1 cut(s) | 2004 |
| BsrDI | GCAATG | 2 cut(s) | 945, 3923 |
| BsrFI | RCCGGY | 3 cut(s) | 466, 685, 934 |
| BssAI | RCCGGY | 3 cut(s) | 466, 685, 934 |
| BssECI | CCNNGG | 5 cut(s) | 272, 3164, 3605, 3886, 4301 |
| BssHII | GCGCGC | 1 cut(s) | 3308 |
| BssNI | GRCGYC | 1 cut(s) | 4325 |
| BssSI | CACGAG | 1 cut(s) | 2817 |
| BssT1I | CCWWGG | 3 cut(s) | 3164, 3605, 3886 |
| Bst2BI | CACGAG | 1 cut(s) | 2817 |
| Bst2UI | CCWGG | 5 cut(s) | 135, 388, 2595, 2838, 3930 |
| Bst6I | CTCTTC | 6 cut(s) | 33, 210, 858, 1315, 1732, 4110 |
| BstACI | GRCGYC | 1 cut(s) | 4325 |
| BstAFI | CTTAAG | 2 cut(s) | 1615, 2951 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 283, 652, 1912, 4243 |
| BstBAI | YACGTR | 3 cut(s) | 1140, 1781, 3821 |
| BstBI | TTCGAA | 1 cut(s) | 2759 |
| BstC8I | GCNNGC | 8 cut(s) | 657, 694, 1263, 1480, 3310, 3352, 3810, 4358 |
| BstDSI | CCRYGG | 2 cut(s) | 3164, 3886 |
| BstEII | GGTNACC | 1 cut(s) | 4305 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3609 |
| BstFNI | CGCG | 2 cut(s) | 1601, 3310 |
| BstHHI | GCGC | 5 cut(s) | 1906, 2907, 3310, 3312, 4409 |
| BstMAI | GTCTC | 7 cut(s) | 342, 816, 1317, 2315, 2556, 2672, 4332 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 283, 527, 652, 716, 920, 1607, 1912, 3309, 4243 |
| BstNI | CCWGG | 5 cut(s) | 135, 388, 2595, 2838, 3930 |
| BstNSI | RCATGY | 6 cut(s) | 460, 1188, 1330, 1465, 1910, 4407 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1838, 3909 |
| BstPI | GGTNACC | 1 cut(s) | 4305 |
| BstSCI | CCNGG | 6 cut(s) | 133, 386, 2593, 2836, 3928, 4301 |
| BstSFI | CTRYAG | 5 cut(s) | 1114, 1523, 2424, 2454, 3638 |
| BstSNI | TACGTA | 1 cut(s) | 3821 |
| BstUI | CGCG | 2 cut(s) | 1601, 3310 |
| BstV1I | GCAGC | 8 cut(s) | 808, 3130, 3133, 3251, 3364, 3624, 3875, 4224 |
| BstV2I | GAAGAC | 2 cut(s) | 1155, 2532 |
| BstX2I | RGATCY | 6 cut(s) | 245, 268, 2564, 2840, 4038, 4295 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 448, 3388, 3606 |
| BstYI | RGATCY | 6 cut(s) | 245, 268, 2564, 2840, 4038, 4295 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1806 |
| BsuI | GTATCC | 1 cut(s) | 157 |
| BsuRI | GGCC | 4 cut(s) | 15, 452, 2404, 3460 |
| BtgI | CCRYGG | 2 cut(s) | 3164, 3886 |
| BtsI | GCAGTG | 2 cut(s) | 653, 726 |
| BtuMI | TCGCGA | 1 cut(s) | 1601 |
| BveI | ACCTGC | 2 cut(s) | 55, 3158 |
| Cac8I | GCNNGC | 8 cut(s) | 657, 694, 1263, 1480, 3310, 3352, 3810, 4358 |
| CaiI | CAGNNNCTG | 3 cut(s) | 3320, 4243, 4382 |
| CciI | TCATGA | 1 cut(s) | 1338 |
| CfoI | GCGC | 5 cut(s) | 1906, 2907, 3310, 3312, 4409 |
| Cfr10I | RCCGGY | 3 cut(s) | 466, 685, 934 |
| Cfr13I | GGNCC | 5 cut(s) | 1802, 2072, 2771, 3458, 3904 |
| CseI | GACGC | 4 cut(s) | 161, 2538, 2593, 4314 |
| Csp6I | GTAC | 6 cut(s) | 628, 1892, 2648, 3056, 3615, 3818 |
| CspAI | ACCGGT | 1 cut(s) | 466 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2381, 2416 |
| CviQI | GTAC | 6 cut(s) | 628, 1892, 2648, 3056, 3615, 3818 |
| DraI | TTTAAA | 1 cut(s) | 1122 |
| DraIII | CACNNNGTG | 1 cut(s) | 3851 |
| DriI | GACNNNNNGTC | 2 cut(s) | 878, 2536 |
| EaeI | YGGCCR | 1 cut(s) | 450 |
| Eam1104I | CTCTTC | 6 cut(s) | 33, 210, 858, 1315, 1732, 4110 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 878, 2536 |
| EarI | CTCTTC | 6 cut(s) | 33, 210, 858, 1315, 1732, 4110 |
| EciI | GGCGGA | 1 cut(s) | 546 |
| Eco105I | TACGTA | 1 cut(s) | 3821 |
| Eco130I | CCWWGG | 3 cut(s) | 3164, 3605, 3886 |
| Eco32I | GATATC | 1 cut(s) | 2493 |
| Eco47I | GGWCC | 4 cut(s) | 1802, 2072, 2771, 3904 |
| Eco57I | CTGAAG | 9 cut(s) | 272, 447, 1232, 1469, 2930, 3570, 3861, 4359, 4439 |
| Eco81I | CCTNAGG | 1 cut(s) | 1806 |
| Eco88I | CYCGRG | 3 cut(s) | 675, 3565, 3992 |
| Eco91I | GGTNACC | 1 cut(s) | 4305 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3609 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2072, 3904 |
| EcoO65I | GGTNACC | 1 cut(s) | 4305 |
| EcoRI | GAATTC | 3 cut(s) | 569, 1570, 1991 |
| EcoRII | CCWGG | 5 cut(s) | 133, 386, 2593, 2836, 3928 |
| EcoRV | GATATC | 1 cut(s) | 2493 |
| EcoT14I | CCWWGG | 3 cut(s) | 3164, 3605, 3886 |
| EcoT22I | ATGCAT | 1 cut(s) | 1186 |
| ErhI | CCWWGG | 3 cut(s) | 3164, 3605, 3886 |
| Esp3I | CGTCTC | 3 cut(s) | 2556, 2672, 4332 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1527, 1559 |
| FaqI | GGGAC | 3 cut(s) | 3460, 3673, 4320 |
| FbaI | TGATCA | 2 cut(s) | 319, 4192 |
| FblI | GTMKAC | 2 cut(s) | 1029, 1764 |
| FspAI | RTGCGCAY | 1 cut(s) | 1905 |
| FspBI | CTAG | 7 cut(s) | 2277, 2652, 2684, 3032, 3368, 4209, 4392 |
| FspI | TGCGCA | 1 cut(s) | 1905 |
| GlaI | GCGC | 5 cut(s) | 1905, 2906, 3309, 3311, 4408 |
| GsuI | CTGGAG | 5 cut(s) | 378, 726, 1380, 2981, 3488 |
| HaeIII | GGCC | 4 cut(s) | 15, 452, 2404, 3460 |
| HapII | CCGG | 7 cut(s) | 96, 467, 686, 935, 1428, 3858, 4303 |
| HgaI | GACGC | 4 cut(s) | 161, 2538, 2593, 4314 |
| HhaI | GCGC | 5 cut(s) | 1906, 2907, 3310, 3312, 4409 |
| Hin1I | GRCGYC | 1 cut(s) | 4325 |
| Hin6I | GCGC | 5 cut(s) | 1904, 2905, 3308, 3310, 4407 |
| HinP1I | GCGC | 5 cut(s) | 1904, 2905, 3308, 3310, 4407 |
| HincII | GTYRAC | 5 cut(s) | 151, 2362, 2484, 3147, 3775 |
| HindII | GTYRAC | 5 cut(s) | 151, 2362, 2484, 3147, 3775 |
| HindIII | AAGCTT | 3 cut(s) | 3098, 3830, 4421 |
| HpaII | CCGG | 7 cut(s) | 96, 467, 686, 935, 1428, 3858, 4303 |
| HphI | GGTGA | 9 cut(s) | 329, 456, 924, 1231, 1233, 1442, 2978, 3032, 3863 |
| HpyCH4IV | ACGT | 9 cut(s) | 147, 636, 1091, 1139, 1368, 1767, 1780, 3626, 3820 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 283, 527, 652, 716, 920, 1607, 1912, 3309, 4243 |
| HpySE526I | ACGT | 9 cut(s) | 147, 636, 1091, 1139, 1368, 1767, 1780, 3626, 3820 |
| Hsp92I | GRCGYC | 1 cut(s) | 4325 |
| HspAI | GCGC | 5 cut(s) | 1904, 2905, 3308, 3310, 4407 |
| Kpn2I | TCCGGA | 2 cut(s) | 95, 3857 |
| KpnI | GGTACC | 1 cut(s) | 2651 |
| Ksp22I | TGATCA | 2 cut(s) | 319, 4192 |
| LguI | GCTCTTC | 1 cut(s) | 210 |
| LmnI | GCTCC | 8 cut(s) | 519, 707, 1361, 2181, 3860, 3958, 4120, 4261 |
| Lsp1109I | GCAGC | 8 cut(s) | 808, 3130, 3133, 3251, 3364, 3624, 3875, 4224 |
| LweI | GCATC | 7 cut(s) | 820, 1274, 1891, 2371, 2536, 2632, 3587 |
| MaeI | CTAG | 7 cut(s) | 2277, 2652, 2684, 3032, 3368, 4209, 4392 |
| MaeII | ACGT | 9 cut(s) | 147, 636, 1091, 1139, 1368, 1767, 1780, 3626, 3820 |
| MbiI | CCGCTC | 1 cut(s) | 2004 |
| MfeI | CAATTG | 2 cut(s) | 2211, 2474 |
| MflI | RGATCY | 6 cut(s) | 245, 268, 2564, 2840, 4038, 4295 |
| MlsI | TGGCCA | 1 cut(s) | 452 |
| MluNI | TGGCCA | 1 cut(s) | 452 |
| MmeI | TCCRAC | 3 cut(s) | 924, 3256, 3526 |
| Mox20I | TGGCCA | 1 cut(s) | 452 |
| Mph1103I | ATGCAT | 1 cut(s) | 1186 |
| MroI | TCCGGA | 2 cut(s) | 95, 3857 |
| MroXI | GAANNNNTTC | 6 cut(s) | 1281, 1539, 1928, 3363, 4059, 4098 |
| MscI | TGGCCA | 1 cut(s) | 452 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1460, 3193 |
| Msp20I | TGGCCA | 1 cut(s) | 452 |
| MspA1I | CMGCKG | 3 cut(s) | 877, 1261, 1652 |
| MspCI | CTTAAG | 2 cut(s) | 1615, 2951 |
| MspI | CCGG | 7 cut(s) | 96, 467, 686, 935, 1428, 3858, 4303 |
| MspR9I | CCNGG | 6 cut(s) | 135, 388, 2595, 2838, 3930, 4303 |
| MunI | CAATTG | 2 cut(s) | 2211, 2474 |
| Mva1269I | GAATGC | 4 cut(s) | 706, 1053, 1482, 2611 |
| MvaI | CCWGG | 5 cut(s) | 135, 388, 2595, 2838, 3930 |
| MvnI | CGCG | 2 cut(s) | 1601, 3310 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 283, 527, 652, 716, 920, 1607, 1912, 3309, 4243 |
| NciI | CCSGG | 1 cut(s) | 4303 |
| NcoI | CCATGG | 2 cut(s) | 3164, 3886 |
| NlaIV | GGNNCC | 6 cut(s) | 1943, 2073, 2649, 2773, 4040, 4492 |
| NmuCI | GTSAC | 4 cut(s) | 930, 2016, 2353, 3316 |
| NruI | TCGCGA | 1 cut(s) | 1601 |
| NsbI | TGCGCA | 1 cut(s) | 1905 |
| NsiI | ATGCAT | 1 cut(s) | 1186 |
| NspI | RCATGY | 6 cut(s) | 460, 1188, 1330, 1465, 1910, 4407 |
| NspV | TTCGAA | 1 cut(s) | 2759 |
| PaeR7I | CTCGAG | 1 cut(s) | 3992 |
| PagI | TCATGA | 1 cut(s) | 1338 |
| PauI | GCGCGC | 1 cut(s) | 3308 |
| PciI | ACATGT | 1 cut(s) | 1461 |
| PciSI | GCTCTTC | 1 cut(s) | 210 |
| PctI | GAATGC | 4 cut(s) | 706, 1053, 1482, 2611 |
| PdmI | GAANNNNTTC | 6 cut(s) | 1281, 1539, 1928, 3363, 4059, 4098 |
| PflFI | GACNNNGTC | 1 cut(s) | 2351 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 1951, 2099, 3320, 3412 |
| PfoI | TCCNGGA | 2 cut(s) | 133, 2593 |
| PinAI | ACCGGT | 1 cut(s) | 466 |
| Ppu21I | YACGTR | 3 cut(s) | 1140, 1781, 3821 |
| PpuMI | RGGWCCY | 2 cut(s) | 2072, 3904 |
| PscI | ACATGT | 1 cut(s) | 1461 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1838, 3909 |
| PshBI | ATTAAT | 3 cut(s) | 972, 3009, 3731 |
| PsiI | TTATAA | 1 cut(s) | 1580 |
| Psp1406I | AACGTT | 2 cut(s) | 147, 1091 |
| Psp5II | RGGWCCY | 2 cut(s) | 2072, 3904 |
| Psp6I | CCWGG | 5 cut(s) | 133, 386, 2593, 2836, 3928 |
| PspEI | GGTNACC | 1 cut(s) | 4305 |
| PspGI | CCWGG | 5 cut(s) | 133, 386, 2593, 2836, 3928 |
| PspN4I | GGNNCC | 6 cut(s) | 1943, 2073, 2649, 2773, 4040, 4492 |
| PspPI | GGNCC | 5 cut(s) | 1802, 2072, 2771, 3458, 3904 |
| PspPPI | RGGWCCY | 2 cut(s) | 2072, 3904 |
| PspXI | VCTCGAGB | 1 cut(s) | 3992 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2852, 2884 |
| PstI | CTGCAG | 1 cut(s) | 3642 |
| PstNI | CAGNNNCTG | 3 cut(s) | 3320, 4243, 4382 |
| PsuI | RGATCY | 6 cut(s) | 245, 268, 2564, 2840, 4038, 4295 |
| PsyI | GACNNNGTC | 1 cut(s) | 2351 |
| PteI | GCGCGC | 1 cut(s) | 3308 |
| PvuII | CAGCTG | 3 cut(s) | 877, 1261, 1652 |
| RruI | TCGCGA | 1 cut(s) | 1601 |
| RsaI | GTAC | 6 cut(s) | 629, 1893, 2649, 3057, 3616, 3819 |
| RsaNI | GTAC | 6 cut(s) | 628, 1892, 2648, 3056, 3615, 3818 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1460, 3193 |
| SapI | GCTCTTC | 1 cut(s) | 210 |
| Sau96I | GGNCC | 5 cut(s) | 1802, 2072, 2771, 3458, 3904 |
| ScaI | AGTACT | 1 cut(s) | 629 |
| ScrFI | CCNGG | 6 cut(s) | 135, 388, 2595, 2838, 3930, 4303 |
| SfaNI | GCATC | 7 cut(s) | 820, 1274, 1891, 2371, 2536, 2632, 3587 |
| SfcI | CTRYAG | 5 cut(s) | 1114, 1523, 2424, 2454, 3638 |
| Sfr274I | CTCGAG | 1 cut(s) | 3992 |
| SfuI | TTCGAA | 1 cut(s) | 2759 |
| SgrAI | CRCCGGYG | 1 cut(s) | 466 |
| SinI | GGWCC | 4 cut(s) | 1802, 2072, 2771, 3904 |
| SlaI | CTCGAG | 1 cut(s) | 3992 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1460, 3193 |
| SnaBI | TACGTA | 1 cut(s) | 3821 |
| SpeI | ACTAGT | 1 cut(s) | 2276 |
| SsiI | CCGC | 8 cut(s) | 557, 1006, 1532, 2004, 2252, 2645, 3153, 4354 |
| SspI | AATATT | 2 cut(s) | 843, 4229 |
| SspMI | CTAG | 7 cut(s) | 2277, 2652, 2684, 3032, 3368, 4209, 4392 |
| StyD4I | CCNGG | 6 cut(s) | 133, 386, 2593, 2836, 3928, 4301 |
| StyI | CCWWGG | 3 cut(s) | 3164, 3605, 3886 |
| TaiI | ACGT | 9 cut(s) | 150, 639, 1094, 1142, 1371, 1770, 1783, 3629, 3823 |
| TaqII | GACCGA | 1 cut(s) | 4053 |
| TatI | WGTACW | 1 cut(s) | 627 |
| TauI | GCSGC | 2 cut(s) | 1008, 2255 |
| TseFI | GTSAC | 4 cut(s) | 930, 2016, 2353, 3316 |
| TseI | GCWGC | 8 cut(s) | 796, 3118, 3121, 3239, 3377, 3637, 3863, 4212 |
| Tsp45I | GTSAC | 4 cut(s) | 930, 2016, 2353, 3316 |
| TspGWI | ACGGA | 6 cut(s) | 2919, 3019, 3183, 3251, 3953, 4493 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2351 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 1951, 2099, 3320, 3412 |
| Vha464I | CTTAAG | 2 cut(s) | 1615, 2951 |
| VpaK11BI | GGWCC | 4 cut(s) | 1802, 2072, 2771, 3904 |
| VspI | ATTAAT | 3 cut(s) | 972, 3009, 3731 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3609 |
| XbaI | TCTAGA | 1 cut(s) | 3367 |
| XceI | RCATGY | 6 cut(s) | 460, 1188, 1330, 1465, 1910, 4407 |
| XhoI | CTCGAG | 1 cut(s) | 3992 |
| XmiI | GTMKAC | 2 cut(s) | 1029, 1764 |
| XmnI | GAANNNNTTC | 6 cut(s) | 1281, 1539, 1928, 3363, 4059, 4098 |
| XspI | CTAG | 7 cut(s) | 2277, 2652, 2684, 3032, 3368, 4209, 4392 |
| ZrmI | AGTACT | 1 cut(s) | 629 |
| Zsp2I | ATGCAT | 1 cut(s) | 1186 |