E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G02880 AT5G02880 |
| fragaria_vesca | FvH4_6g15270 FvH4_6g15270 FvH4_6g15270 FvH4_6g15270 |
| malus_domestica | MD04G1104600.v1.1 MD12G1124500.v1.1 |
| prunus_persica | Prupe.6G241700_v2.0.a1 Prupe.6G241700_v2.0.a1 |
| pyrus_communis | pycom12g12310 |
| rosa_chinensis | RchiOBHm_Chr3g0468671 |
| rosa_laevigata | RLG00000024416 |
| rosa_multiflora | Rmu_sc0011538.1_g000007 |
| rosa_roxburghii | Rroxscaffold_6G00412660 |
| rosa_rugosa | Rorug03G0096200 |
| rosa_samantha | Rh3AG145000 Rh3BG167500 Rh3DG166300 |
| rosa_wichuraiana | Rw3G013670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 504 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 772 |
| Acc16I | TGCGCA | 1 cut(s) | 3181 |
| Acc36I | ACCTGC | 1 cut(s) | 2187 |
| AccB1I | GGYRCC | 2 cut(s) | 41, 3103 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2152, 2173 |
| AccI | GTMKAC | 5 cut(s) | 398, 1228, 1304, 1649, 2625 |
| AccII | CGCG | 1 cut(s) | 1081 |
| AccIII | TCCGGA | 1 cut(s) | 2105 |
| AciI | CCGC | 4 cut(s) | 1912, 2140, 2822, 3233 |
| AcoI | YGGCCR | 1 cut(s) | 781 |
| AcuI | CTGAAG | 4 cut(s) | 113, 566, 1590, 2891 |
| AcyI | GRCGYC | 2 cut(s) | 270, 1024 |
| AdeI | CACNNNGTG | 1 cut(s) | 1352 |
| AfeI | AGCGCT | 1 cut(s) | 2484 |
| AflII | CTTAAG | 1 cut(s) | 3224 |
| AflIII | ACRYGT | 2 cut(s) | 624, 1079 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2572 |
| AhlI | ACTAGT | 1 cut(s) | 2815 |
| AjiI | CACGTC | 1 cut(s) | 627 |
| AjnI | CCWGG | 5 cut(s) | 324, 2186, 2734, 2883, 3118 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1503, 1535 |
| AleI | CACNNNNGTG | 1 cut(s) | 2267 |
| Alw21I | GWGCWC | 3 cut(s) | 104, 2202, 2979 |
| Alw26I | GTCTC | 3 cut(s) | 1785, 2089, 3245 |
| Aor13HI | TCCGGA | 1 cut(s) | 2105 |
| Aor51HI | AGCGCT | 1 cut(s) | 2484 |
| AoxI | GGCC | 5 cut(s) | 135, 781, 1157, 2032, 2765 |
| ApeKI | GCWGC | 4 cut(s) | 66, 2024, 2162, 3229 |
| AseI | ATTAAT | 1 cut(s) | 920 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 126, 598, 1104, 1149, 1868, 2649 |
| AspLEI | GCGC | 3 cut(s) | 943, 2485, 3182 |
| AspS9I | GGNCC | 8 cut(s) | 412, 525, 756, 901, 1213, 2033, 2176, 2243 |
| AsuHPI | GGTGA | 7 cut(s) | 444, 1188, 1233, 2049, 2092, 2281, 2908 |
| AsuII | TTCGAA | 1 cut(s) | 3160 |
| AvaII | GGWCC | 7 cut(s) | 412, 525, 756, 901, 1213, 2176, 2243 |
| AxyI | CCTNAGG | 1 cut(s) | 416 |
| BaeGI | GKGCMC | 2 cut(s) | 987, 3106 |
| BalI | TGGCCA | 1 cut(s) | 783 |
| BamHI | GGATCC | 2 cut(s) | 178, 382 |
| BanI | GGYRCC | 2 cut(s) | 41, 3103 |
| BanII | GRGCYC | 1 cut(s) | 2979 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 111, 143 |
| BauI | CACGAG | 2 cut(s) | 1782, 2276 |
| BbsI | GAAGAC | 1 cut(s) | 1371 |
| Bbv12I | GWGCWC | 3 cut(s) | 104, 2202, 2979 |
| BbvI | GCAGC | 4 cut(s) | 53, 2036, 2149, 3216 |
| BccI | CCATC | 6 cut(s) | 463, 1252, 1369, 2068, 2167, 2486 |
| BceAI | ACGGC | 1 cut(s) | 1444 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1294, 1328 |
| BciT130I | CCWGG | 5 cut(s) | 326, 2188, 2736, 2885, 3120 |
| BciVI | GTATCC | 1 cut(s) | 1398 |
| BclI | TGATCA | 4 cut(s) | 649, 891, 2770, 2983 |
| BcoDI | GTCTC | 3 cut(s) | 1785, 2089, 3245 |
| BcuI | ACTAGT | 1 cut(s) | 2815 |
| BfaI | CTAG | 8 cut(s) | 1260, 2042, 2297, 2606, 2763, 2816, 2850, 3171 |
| BfmI | CTRYAG | 4 cut(s) | 224, 670, 837, 1113 |
| BfoI | RGCGCY | 1 cut(s) | 2486 |
| BfrI | CTTAAG | 1 cut(s) | 3224 |
| BfuAI | ACCTGC | 1 cut(s) | 2187 |
| BfuI | GTATCC | 1 cut(s) | 1398 |
| BisI | GCNGC | 5 cut(s) | 67, 2025, 2163, 3230, 3233 |
| BlpI | GCTNAGC | 1 cut(s) | 213 |
| BlsI | GCNGC | 5 cut(s) | 68, 2026, 2164, 3231, 3234 |
| BmcAI | AGTACT | 3 cut(s) | 533, 788, 2012 |
| Bme1390I | CCNGG | 5 cut(s) | 326, 2188, 2736, 2885, 3120 |
| Bme18I | GGWCC | 7 cut(s) | 412, 525, 756, 901, 1213, 2176, 2243 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2572 |
| BmgBI | CACGTC | 1 cut(s) | 627 |
| BmgT120I | GGNCC | 8 cut(s) | 412, 525, 756, 901, 1213, 2033, 2176, 2243 |
| BmiI | GGNNCC | 7 cut(s) | 43, 180, 384, 1290, 1329, 1458, 3105 |
| BmrFI | CCNGG | 5 cut(s) | 326, 2188, 2736, 2885, 3120 |
| BmrI | ACTGGG | 1 cut(s) | 3108 |
| BmsI | GCATC | 7 cut(s) | 277, 631, 1899, 1906, 2815, 2911, 3140 |
| BmuI | ACTGGG | 1 cut(s) | 3108 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1080 |
| BpiI | GAAGAC | 1 cut(s) | 1371 |
| BpmI | CTGGAG | 4 cut(s) | 180, 1475, 1648, 3141 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2586 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 213 |
| Bpu14I | TTCGAA | 1 cut(s) | 3160 |
| BpuEI | CTTGAG | 1 cut(s) | 2225 |
| Bsa29I | ATCGAT | 1 cut(s) | 1818 |
| BsaBI | GATNNNNATC | 1 cut(s) | 454 |
| BsaHI | GRCGYC | 2 cut(s) | 270, 1024 |
| BsaJI | CCNNGG | 5 cut(s) | 324, 2250, 2265, 2396, 3001 |
| BsaWI | WCCGGW | 3 cut(s) | 38, 1231, 2105 |
| Bse1I | ACTGG | 7 cut(s) | 784, 1391, 1853, 2085, 2239, 2338, 3103 |
| Bse21I | CCTNAGG | 1 cut(s) | 416 |
| Bse3DI | GCAATG | 2 cut(s) | 985, 1130 |
| Bse8I | GATNNNNATC | 1 cut(s) | 454 |
| BseAI | TCCGGA | 1 cut(s) | 2105 |
| BseBI | CCWGG | 5 cut(s) | 326, 2188, 2736, 2885, 3120 |
| BseCI | ATCGAT | 1 cut(s) | 1818 |
| BseDI | CCNNGG | 5 cut(s) | 324, 2250, 2265, 2396, 3001 |
| BseGI | GGATG | 7 cut(s) | 1279, 1731, 1758, 1921, 2512, 2568, 2830 |
| BseJI | GATNNNNATC | 1 cut(s) | 454 |
| BseMI | GCAATG | 2 cut(s) | 985, 1130 |
| BseNI | ACTGG | 7 cut(s) | 784, 1391, 1853, 2085, 2239, 2338, 3103 |
| BseSI | GKGCMC | 2 cut(s) | 987, 3106 |
| BseXI | GCAGC | 4 cut(s) | 53, 2036, 2149, 3216 |
| BseYI | CCCAGC | 1 cut(s) | 2348 |
| Bsh1236I | CGCG | 1 cut(s) | 1081 |
| BshFI | GGCC | 5 cut(s) | 137, 783, 1159, 2034, 2767 |
| BshNI | GGYRCC | 2 cut(s) | 41, 3103 |
| BshVI | ATCGAT | 1 cut(s) | 1818 |
| BsiHKAI | GWGCWC | 3 cut(s) | 104, 2202, 2979 |
| BsiSI | CCGG | 3 cut(s) | 39, 1232, 2106 |
| BslFI | GGGAC | 3 cut(s) | 1088, 1962, 2366 |
| BsmAI | GTCTC | 3 cut(s) | 1785, 2089, 3245 |
| BsmBI | CGTCTC | 1 cut(s) | 3245 |
| BsmFI | GGGAC | 3 cut(s) | 1088, 1962, 2366 |
| BsnI | GGCC | 5 cut(s) | 137, 783, 1159, 2034, 2767 |
| Bsp119I | TTCGAA | 1 cut(s) | 3160 |
| Bsp1286I | GDGCHC | 5 cut(s) | 104, 987, 2202, 2979, 3106 |
| Bsp13I | TCCGGA | 1 cut(s) | 2105 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 213 |
| Bsp19I | CCATGG | 2 cut(s) | 2396, 3001 |
| BspACI | CCGC | 4 cut(s) | 1912, 2140, 2822, 3233 |
| BspANI | GGCC | 5 cut(s) | 137, 783, 1159, 2034, 2767 |
| BspDI | ATCGAT | 1 cut(s) | 1818 |
| BspEI | TCCGGA | 1 cut(s) | 2105 |
| BspFNI | CGCG | 1 cut(s) | 1081 |
| BspLI | GGNNCC | 7 cut(s) | 43, 180, 384, 1290, 1329, 1458, 3105 |
| BspMAI | CTGCAG | 1 cut(s) | 228 |
| BspMI | ACCTGC | 1 cut(s) | 2187 |
| BspQI | GCTCTTC | 1 cut(s) | 3070 |
| BspT104I | TTCGAA | 1 cut(s) | 3160 |
| BspT107I | GGYRCC | 2 cut(s) | 41, 3103 |
| BspTI | CTTAAG | 1 cut(s) | 3224 |
| BsrDI | GCAATG | 2 cut(s) | 985, 1130 |
| BsrI | ACTGG | 7 cut(s) | 784, 1391, 1853, 2085, 2239, 2338, 3103 |
| BssECI | CCNNGG | 5 cut(s) | 324, 2250, 2265, 2396, 3001 |
| BssNAI | GTATAC | 1 cut(s) | 1650 |
| BssNI | GRCGYC | 2 cut(s) | 270, 1024 |
| BssSI | CACGAG | 2 cut(s) | 1782, 2276 |
| BssT1I | CCWWGG | 4 cut(s) | 2250, 2265, 2396, 3001 |
| Bst1107I | GTATAC | 1 cut(s) | 1650 |
| Bst2BI | CACGAG | 2 cut(s) | 1782, 2276 |
| Bst2UI | CCWGG | 5 cut(s) | 326, 2188, 2736, 2885, 3120 |
| Bst6I | CTCTTC | 2 cut(s) | 3070, 3247 |
| BstACI | GRCGYC | 2 cut(s) | 270, 1024 |
| BstAFI | CTTAAG | 1 cut(s) | 3224 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1352, 2197 |
| BstBI | TTCGAA | 1 cut(s) | 3160 |
| BstC8I | GCNNGC | 5 cut(s) | 482, 1137, 1255, 2114, 2184 |
| BstDSI | CCRYGG | 2 cut(s) | 2396, 3001 |
| BstEII | GGTNACC | 2 cut(s) | 319, 2080 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3120 |
| BstF5I | GGATG | 7 cut(s) | 1279, 1731, 1758, 1921, 2512, 2568, 2830 |
| BstFNI | CGCG | 1 cut(s) | 1081 |
| BstH2I | RGCGCY | 1 cut(s) | 2486 |
| BstHHI | GCGC | 3 cut(s) | 943, 2485, 3182 |
| BstMAI | GTCTC | 3 cut(s) | 1785, 2089, 3245 |
| BstNI | CCWGG | 5 cut(s) | 326, 2188, 2736, 2885, 3120 |
| BstNSI | RCATGY | 7 cut(s) | 115, 484, 1139, 1303, 2116, 2186, 2305 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1080 |
| BstPI | GGTNACC | 2 cut(s) | 319, 2080 |
| BstSCI | CCNGG | 5 cut(s) | 324, 2186, 2734, 2883, 3118 |
| BstSFI | CTRYAG | 4 cut(s) | 224, 670, 837, 1113 |
| BstSLI | GKGCMC | 2 cut(s) | 987, 3106 |
| BstUI | CGCG | 1 cut(s) | 1081 |
| BstV1I | GCAGC | 4 cut(s) | 53, 2036, 2149, 3216 |
| BstV2I | GAAGAC | 1 cut(s) | 1371 |
| BstX2I | RGATCY | 4 cut(s) | 178, 382, 1117, 2710 |
| BstYI | RGATCY | 4 cut(s) | 178, 382, 1117, 2710 |
| BstZ17I | GTATAC | 1 cut(s) | 1650 |
| Bsu15I | ATCGAT | 1 cut(s) | 1818 |
| Bsu36I | CCTNAGG | 1 cut(s) | 416 |
| BsuI | GTATCC | 1 cut(s) | 1398 |
| BsuRI | GGCC | 5 cut(s) | 137, 783, 1159, 2034, 2767 |
| BsuTUI | ATCGAT | 1 cut(s) | 1818 |
| BtgI | CCRYGG | 2 cut(s) | 2396, 3001 |
| BtrI | CACGTC | 1 cut(s) | 627 |
| BtsCI | GGATG | 7 cut(s) | 1279, 1731, 1758, 1921, 2512, 2568, 2830 |
| BtsI | GCAGTG | 3 cut(s) | 1932, 2036, 2600 |
| BveI | ACCTGC | 1 cut(s) | 2187 |
| Cac8I | GCNNGC | 5 cut(s) | 482, 1137, 1255, 2114, 2184 |
| CfoI | GCGC | 3 cut(s) | 943, 2485, 3182 |
| Cfr13I | GGNCC | 8 cut(s) | 412, 525, 756, 901, 1213, 2033, 2176, 2243 |
| ClaI | ATCGAT | 1 cut(s) | 1818 |
| CseI | GACGC | 4 cut(s) | 259, 671, 1013, 1070 |
| CsiI | ACCWGGT | 1 cut(s) | 2883 |
| DraIII | CACNNNGTG | 1 cut(s) | 1352 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 772 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2572 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 772 |
| EaeI | YGGCCR | 1 cut(s) | 781 |
| Eam1104I | CTCTTC | 2 cut(s) | 3070, 3247 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2572 |
| EarI | CTCTTC | 2 cut(s) | 3070, 3247 |
| EciI | GGCGGA | 1 cut(s) | 2837 |
| Ecl136II | GAGCTC | 1 cut(s) | 2977 |
| Eco130I | CCWWGG | 4 cut(s) | 2250, 2265, 2396, 3001 |
| Eco147I | AGGCCT | 1 cut(s) | 2767 |
| Eco24I | GRGCYC | 1 cut(s) | 2979 |
| Eco47I | GGWCC | 7 cut(s) | 412, 525, 756, 901, 1213, 2176, 2243 |
| Eco47III | AGCGCT | 1 cut(s) | 2484 |
| Eco53kI | GAGCTC | 1 cut(s) | 2977 |
| Eco57I | CTGAAG | 4 cut(s) | 113, 566, 1590, 2891 |
| Eco81I | CCTNAGG | 1 cut(s) | 416 |
| Eco91I | GGTNACC | 2 cut(s) | 319, 2080 |
| EcoICRI | GAGCTC | 1 cut(s) | 2977 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3120 |
| EcoO109I | RGGNCCY | 2 cut(s) | 412, 756 |
| EcoO65I | GGTNACC | 2 cut(s) | 319, 2080 |
| EcoRI | GAATTC | 2 cut(s) | 747, 2255 |
| EcoRII | CCWGG | 5 cut(s) | 324, 2186, 2734, 2883, 3118 |
| EcoT14I | CCWWGG | 4 cut(s) | 2250, 2265, 2396, 3001 |
| EcoT38I | GRGCYC | 1 cut(s) | 2979 |
| ErhI | CCWWGG | 4 cut(s) | 2250, 2265, 2396, 3001 |
| Esp3I | CGTCTC | 1 cut(s) | 3245 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1584, 1616 |
| FaqI | GGGAC | 3 cut(s) | 1088, 1962, 2366 |
| FauI | CCCGC | 1 cut(s) | 1905 |
| FauNDI | CATATG | 2 cut(s) | 1003, 1018 |
| FbaI | TGATCA | 4 cut(s) | 649, 891, 2770, 2983 |
| FblI | GTMKAC | 5 cut(s) | 398, 1228, 1304, 1649, 2625 |
| Fnu4HI | GCNGC | 5 cut(s) | 67, 2025, 2163, 3230, 3233 |
| FokI | GGATG | 7 cut(s) | 1266, 1718, 1765, 1928, 2519, 2555, 2837 |
| FriOI | GRGCYC | 1 cut(s) | 2979 |
| Fsp4HI | GCNGC | 5 cut(s) | 67, 2025, 2163, 3230, 3233 |
| FspBI | CTAG | 8 cut(s) | 1260, 2042, 2297, 2606, 2763, 2816, 2850, 3171 |
| FspI | TGCGCA | 1 cut(s) | 3181 |
| GlaI | GCGC | 3 cut(s) | 942, 2484, 3181 |
| GluI | GCNGC | 5 cut(s) | 67, 2025, 2163, 3230, 3233 |
| GsaI | CCCAGC | 1 cut(s) | 2352 |
| GsuI | CTGGAG | 4 cut(s) | 180, 1475, 1648, 3141 |
| HaeII | RGCGCY | 1 cut(s) | 2486 |
| HaeIII | GGCC | 5 cut(s) | 137, 783, 1159, 2034, 2767 |
| HapII | CCGG | 3 cut(s) | 39, 1232, 2106 |
| HgaI | GACGC | 4 cut(s) | 259, 671, 1013, 1070 |
| HhaI | GCGC | 3 cut(s) | 943, 2485, 3182 |
| Hin1I | GRCGYC | 2 cut(s) | 270, 1024 |
| Hin6I | GCGC | 3 cut(s) | 941, 2483, 3180 |
| HinP1I | GCGC | 3 cut(s) | 941, 2483, 3180 |
| HincII | GTYRAC | 5 cut(s) | 21, 297, 1305, 1633, 3150 |
| HindII | GTYRAC | 5 cut(s) | 21, 297, 1305, 1633, 3150 |
| HindIII | AAGCTT | 4 cut(s) | 587, 698, 1741, 2862 |
| HpaI | GTTAAC | 2 cut(s) | 297, 3150 |
| HpaII | CCGG | 3 cut(s) | 39, 1232, 2106 |
| HphI | GGTGA | 7 cut(s) | 444, 1188, 1233, 2049, 2092, 2281, 2908 |
| Hpy99I | CGWCG | 2 cut(s) | 1029, 1309 |
| HpyAV | CCTTC | 9 cut(s) | 127, 260, 590, 1094, 1436, 1565, 2188, 2536, 3281 |
| HpyCH4IV | ACGT | 3 cut(s) | 626, 1635, 2953 |
| HpySE526I | ACGT | 3 cut(s) | 626, 1635, 2953 |
| Hsp92I | GRCGYC | 2 cut(s) | 270, 1024 |
| HspAI | GCGC | 3 cut(s) | 941, 2483, 3180 |
| Kpn2I | TCCGGA | 1 cut(s) | 2105 |
| Ksp22I | TGATCA | 4 cut(s) | 649, 891, 2770, 2983 |
| KspAI | GTTAAC | 2 cut(s) | 297, 3150 |
| LguI | GCTCTTC | 1 cut(s) | 3070 |
| LmnI | GCTCC | 6 cut(s) | 1288, 1456, 2108, 2205, 2490, 2982 |
| Lsp1109I | GCAGC | 4 cut(s) | 53, 2036, 2149, 3216 |
| LweI | GCATC | 7 cut(s) | 277, 631, 1899, 1906, 2815, 2911, 3140 |
| MabI | ACCWGGT | 1 cut(s) | 2883 |
| MaeI | CTAG | 8 cut(s) | 1260, 2042, 2297, 2606, 2763, 2816, 2850, 3171 |
| MaeII | ACGT | 3 cut(s) | 626, 1635, 2953 |
| MaeIII | GTNAC | 8 cut(s) | 319, 818, 2080, 2087, 2273, 2833, 3005, 3094 |
| MfeI | CAATTG | 1 cut(s) | 314 |
| MflI | RGATCY | 4 cut(s) | 178, 382, 1117, 2710 |
| MhlI | GDGCHC | 5 cut(s) | 104, 987, 2202, 2979, 3106 |
| MlsI | TGGCCA | 1 cut(s) | 783 |
| MluI | ACGCGT | 1 cut(s) | 1079 |
| MluNI | TGGCCA | 1 cut(s) | 783 |
| MlyI | GAGTC | 4 cut(s) | 16, 245, 1546, 2281 |
| MmeI | TCCRAC | 2 cut(s) | 360, 2270 |
| Mox20I | TGGCCA | 1 cut(s) | 783 |
| MroI | TCCGGA | 1 cut(s) | 2105 |
| MroXI | GAANNNNTTC | 6 cut(s) | 126, 598, 1104, 1149, 1868, 2649 |
| MscI | TGGCCA | 1 cut(s) | 783 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1039, 1373, 2267 |
| Msp20I | TGGCCA | 1 cut(s) | 783 |
| MspA1I | CMGCKG | 1 cut(s) | 1453 |
| MspCI | CTTAAG | 1 cut(s) | 3224 |
| MspI | CCGG | 3 cut(s) | 39, 1232, 2106 |
| MspR9I | CCNGG | 5 cut(s) | 326, 2188, 2736, 2885, 3120 |
| MunI | CAATTG | 1 cut(s) | 314 |
| MvaI | CCWGG | 5 cut(s) | 326, 2188, 2736, 2885, 3120 |
| MvnI | CGCG | 1 cut(s) | 1081 |
| NcoI | CCATGG | 2 cut(s) | 2396, 3001 |
| NdeI | CATATG | 2 cut(s) | 1003, 1018 |
| NlaIV | GGNNCC | 7 cut(s) | 43, 180, 384, 1290, 1329, 1458, 3105 |
| NmuCI | GTSAC | 4 cut(s) | 2080, 2087, 2273, 3094 |
| NsbI | TGCGCA | 1 cut(s) | 3181 |
| NspI | RCATGY | 7 cut(s) | 115, 484, 1139, 1303, 2116, 2186, 2305 |
| NspV | TTCGAA | 1 cut(s) | 3160 |
| OliI | CACNNNNGTG | 1 cut(s) | 2267 |
| PaeI | GCATGC | 4 cut(s) | 484, 1139, 2116, 2186 |
| PceI | AGGCCT | 1 cut(s) | 2767 |
| PciSI | GCTCTTC | 1 cut(s) | 3070 |
| PdmI | GAANNNNTTC | 6 cut(s) | 126, 598, 1104, 1149, 1868, 2649 |
| PfeI | GAWTC | 8 cut(s) | 494, 740, 1412, 1970, 2072, 2156, 2645, 2957 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2152, 2173 |
| PfoI | TCCNGGA | 1 cut(s) | 3118 |
| PkrI | GCNGC | 5 cut(s) | 68, 2026, 2164, 3231, 3234 |
| PleI | GAGTC | 4 cut(s) | 16, 245, 1545, 2280 |
| PpsI | GAGTC | 4 cut(s) | 16, 245, 1545, 2280 |
| PpuMI | RGGWCCY | 2 cut(s) | 412, 756 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1080 |
| PshBI | ATTAAT | 1 cut(s) | 920 |
| PsiI | TTATAA | 1 cut(s) | 504 |
| Psp124BI | GAGCTC | 1 cut(s) | 2979 |
| Psp5II | RGGWCCY | 2 cut(s) | 412, 756 |
| Psp6I | CCWGG | 5 cut(s) | 324, 2186, 2734, 2883, 3118 |
| PspEI | GGTNACC | 2 cut(s) | 319, 2080 |
| PspFI | CCCAGC | 1 cut(s) | 2348 |
| PspGI | CCWGG | 5 cut(s) | 324, 2186, 2734, 2883, 3118 |
| PspN4I | GGNNCC | 7 cut(s) | 43, 180, 384, 1290, 1329, 1458, 3105 |
| PspPI | GGNCC | 8 cut(s) | 412, 525, 756, 901, 1213, 2033, 2176, 2243 |
| PspPPI | RGGWCCY | 2 cut(s) | 412, 756 |
| PstI | CTGCAG | 1 cut(s) | 228 |
| PsuI | RGATCY | 4 cut(s) | 178, 382, 1117, 2710 |
| PvuII | CAGCTG | 1 cut(s) | 1453 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1039, 1373, 2267 |
| SacI | GAGCTC | 1 cut(s) | 2979 |
| SalI | GTCGAC | 1 cut(s) | 1303 |
| SapI | GCTCTTC | 1 cut(s) | 3070 |
| SatI | GCNGC | 5 cut(s) | 67, 2025, 2163, 3230, 3233 |
| Sau96I | GGNCC | 8 cut(s) | 412, 525, 756, 901, 1213, 2033, 2176, 2243 |
| ScaI | AGTACT | 3 cut(s) | 533, 788, 2012 |
| SchI | GAGTC | 4 cut(s) | 16, 245, 1546, 2281 |
| ScrFI | CCNGG | 5 cut(s) | 326, 2188, 2736, 2885, 3120 |
| SduI | GDGCHC | 5 cut(s) | 104, 987, 2202, 2979, 3106 |
| SexAI | ACCWGGT | 1 cut(s) | 2883 |
| SfaNI | GCATC | 7 cut(s) | 277, 631, 1899, 1906, 2815, 2911, 3140 |
| SfcI | CTRYAG | 4 cut(s) | 224, 670, 837, 1113 |
| SfuI | TTCGAA | 1 cut(s) | 3160 |
| SinI | GGWCC | 7 cut(s) | 412, 525, 756, 901, 1213, 2176, 2243 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1039, 1373, 2267 |
| SmlI | CTYRAG | 2 cut(s) | 2204, 3224 |
| SmoI | CTYRAG | 2 cut(s) | 2204, 3224 |
| SpeI | ACTAGT | 1 cut(s) | 2815 |
| SphI | GCATGC | 4 cut(s) | 484, 1139, 2116, 2186 |
| SseBI | AGGCCT | 1 cut(s) | 2767 |
| SsiI | CCGC | 4 cut(s) | 1912, 2140, 2822, 3233 |
| SspI | AATATT | 1 cut(s) | 2788 |
| SspMI | CTAG | 8 cut(s) | 1260, 2042, 2297, 2606, 2763, 2816, 2850, 3171 |
| SstI | GAGCTC | 1 cut(s) | 2979 |
| StuI | AGGCCT | 1 cut(s) | 2767 |
| StyD4I | CCNGG | 5 cut(s) | 324, 2186, 2734, 2883, 3118 |
| StyI | CCWWGG | 4 cut(s) | 2250, 2265, 2396, 3001 |
| TaiI | ACGT | 3 cut(s) | 629, 1638, 2956 |
| TaqI | TCGA | 8 cut(s) | 81, 738, 1304, 1818, 2119, 2997, 3060, 3160 |
| TatI | WGTACW | 4 cut(s) | 531, 786, 2010, 2663 |
| TauI | GCSGC | 1 cut(s) | 3235 |
| TfiI | GAWTC | 8 cut(s) | 494, 740, 1412, 1970, 2072, 2156, 2645, 2957 |
| TseFI | GTSAC | 4 cut(s) | 2080, 2087, 2273, 3094 |
| TseI | GCWGC | 4 cut(s) | 66, 2024, 2162, 3229 |
| Tsp45I | GTSAC | 4 cut(s) | 2080, 2087, 2273, 3094 |
| TspGWI | ACGGA | 2 cut(s) | 1322, 2006 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2152, 2173 |
| Vha464I | CTTAAG | 1 cut(s) | 3224 |
| VpaK11BI | GGWCC | 7 cut(s) | 412, 525, 756, 901, 1213, 2176, 2243 |
| VspI | ATTAAT | 1 cut(s) | 920 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3120 |
| XbaI | TCTAGA | 1 cut(s) | 2849 |
| XceI | RCATGY | 7 cut(s) | 115, 484, 1139, 1303, 2116, 2186, 2305 |
| XmiI | GTMKAC | 5 cut(s) | 398, 1228, 1304, 1649, 2625 |
| XmnI | GAANNNNTTC | 6 cut(s) | 126, 598, 1104, 1149, 1868, 2649 |
| XspI | CTAG | 8 cut(s) | 1260, 2042, 2297, 2606, 2763, 2816, 2850, 3171 |
| ZrmI | AGTACT | 3 cut(s) | 533, 788, 2012 |