Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009331

Physical Location & Seq

Genomic Coordinates Reverse (-)

1862325 .. 1866433

Gene Structure 4109 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G06160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGTCGTCGACTCTCCTCGAGCAAACTCGCTCCAATCACGAAGAGGTTGAAAGGTTGGAGCGATTGGTTGTGGAAGATCTACAGAAGGAGCCACCGTCCAGCAAGGACAGATTGGTCCAGGGACATCGTGTTCGTCACATGATTGAGTCTATTATGCTCACCACTGAGAAACTTGTTGAAACCTATGAAGATAAGGATGGGGCGTGGGATGATGAGATTGCAGCGCTTGGTGGCCAGACTGCGACAGGGACAAATGTGTTTAGTGAATTTTACGATCGTTTGAAAGAGATACGTGAATATCATAAAAGGCATCCTTCTGGACGTCTTGTTGATGCTAATGAAGACTACGAAGCACGCCTGAAGGAGGAACCAATTATTGCGTTCAGTGGAGAGGAAGGCAATGGTCGGTACTTGGACTTGCATGATATGTATAACCAGTACATCAACTCTAAATTTGGGGAAAGGGTTGAATATTCTGCTTACCTTGATGTTTTTTCTCAACCAGAGAAAATACCGCGTAAACTGAAGTTATCGAGGCAATACATGAAGTATATGGAAGCTCTACTTGAGTACCTGGTCTACTTCTTCCAGCGAACCGAGCCGTTGCAAGATCTTGACCGGATACTTTCTAAGGTTTGTTCTGATTTTGAAGAGCAATATGCAGATGGAATAGTAGAAGGCCTGGATAATGAACTTATTCCATCTCAGCATACTGTCATAGATCTTGATTACTACAGTACAGTCGAGGAACTGGTAGATGTAGGACCTGAAAAGCTAAAAGAGGCATTGGGGGCATTAGGACTGAAGGTTGGTGGTACTCCGCAGCAGCGTGCCGAGAGACTTTTCCTGACAAAGCATACGCCTTTGGAAAAGCTGGATAAGAAACATTTTGCCAGACCTCCACACAACGGAAAACAAAACGGAGATGCCAAATCAACACATGAGTCTGAAAATGCTAAAGAGATTGCACTAACAGAGGCCAAAGTGAAGAAACTCTGCAATTTACTTGATGAGACCATCGAAAGGACAAAACAAAACATTGTAAAGAAACAGTCGTTGACATATGAAGAAATGGAGGGAGAACGTGAAGGGGAGGAAGCTAATACCGAATTAGAAAGTGATGACGAGGACGGTTTGATTTACAATCCGCTGAAGCTACCAATAGGTTGGGATGGGAAGCCTATACCATACTGGCTCTACAAACTTCATGGCCTTGGCCAGGAGTTTAAATGCGAGATATGTGGGAACTATAGCTATTGGGGAAGAAGGGCTTTTGAGAGACATTTTAAAGAATGGCGACACCAACACGGAATGCGTTGCCTAGGAATCCCAAACACAAAGAACTTCAACGAAATCACTTCGATTGAGGAAGCCAAAGAATTGTGGAAGAGGATACAGGAGAGGCAAGGAGTGAACAAATGGAGGCCAGAACTTGAAGAAGAATATGAAGATCGTGAAGGTAACATTTACAACAAGAAGACTTACTCTGATCTTCAACGCCAAGGTCTCATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005737 GO:0005829 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0022607 GO:0022613 GO:0022618 GO:0031974 GO:0031981 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043900 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045694 GO:0046483 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0065003 GO:0065007 GO:0070013 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990904 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DUF3449 SF3A3 SF3a60_bindingd Telomere_Sde2_2

Protein Analysis

504

Amino Acids

58.97

Weight (kDa)

5.2

Isoelectric Point (pI)

42.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SF3a60_bindingd	PF12108	80 - 106	3.6e-13	Splicing factor SF3a60 binding domain
SF3A3	PF16837	128 - 175	3.5e-17	Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9
SDE2_2C	PF13297	235 - 299	2.3e-25	Replication stress response SDE2 C-terminal
SF3a60_Prp9_C	PF11931	385 - 504	4.9e-57	SF3a60/Prp9 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0009331)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06160
fragaria_vesca	FvH4_1g22860 FvH4_5g28470 FvH4_7g05370 FvH4_7g06390
malus_domestica	MD01G1219700.v1.1 MD07G1290300.v1.1
prunus_persica	Prupe.2G311500_v2.0.a1
pyrus_communis	pycom01g22950 pycom07g26290
rosa_chinensis	RchiOBHm_Chr1g0331941
rosa_laevigata	RLG00000025855 RLG00000029702
rosa_multiflora	Rmu_sc0004874.1_g000018 Rmu_sc0008128.1_g000009
rosa_roxburghii	Rroxscaffold_4G00318600
rosa_rugosa	Rorug01G0097000
rosa_samantha	Rh1AG121100 Rh1BG092700 Rh1CG115900 Rh1DG127000
rosa_wichuraiana	Rw1G009880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	113
AatII	GACGTC	1 cut(s)	325
AccI	GTMKAC	2 cut(s)	8, 579
AccII	CGCG	1 cut(s)	517
AciI	CCGC	3 cut(s)	515, 821, 1148
AcoI	YGGCCR	2 cut(s)	232, 1216
AcsI	RAATTY	2 cut(s)	266, 452
AcuI	CTGAAG	4 cut(s)	380, 545, 824, 1172
AcyI	GRCGYC	1 cut(s)	322
AfaI	GTAC	5 cut(s)	410, 440, 572, 739, 817
AfeI	AGCGCT	1 cut(s)	225
AfiI	CCNNNNNNNGG	4 cut(s)	364, 908, 1023, 1219
AgsI	TTSAA	8 cut(s)	50, 179, 283, 470, 650, 1348, 1436, 1496
AjnI	CCWGG	4 cut(s)	117, 573, 681, 1218
AloI	GAACNNNNNNTCC	2 cut(s)	114, 146
AluBI	AGCT	6 cut(s)	560, 775, 874, 1100, 1156, 1254
AluI	AGCT	6 cut(s)	560, 775, 874, 1100, 1156, 1254
Alw26I	GTCTC	4 cut(s)	832, 1007, 1273, 1511
Ama87I	CYCGRG	1 cut(s)	17
Aor51HI	AGCGCT	1 cut(s)	225
AoxI	GGCC	6 cut(s)	232, 679, 978, 1210, 1216, 1424
ApeKI	GCWGC	3 cut(s)	221, 823, 826
ApoI	RAATTY	2 cut(s)	266, 452
ArsI	GACNNNNNNTTYG	2 cut(s)	114, 146
Asp700I	GAANNNNTTC	1 cut(s)	696
AspA2I	CCTAGG	1 cut(s)	1321
AspLEI	GCGC	1 cut(s)	226
AspS9I	GGNCC	2 cut(s)	115, 764
AsuHPI	GGTGA	1 cut(s)	151
AvaI	CYCGRG	1 cut(s)	17
AvaII	GGWCC	2 cut(s)	115, 764
AvrII	CCTAGG	1 cut(s)	1321
BaeI	ACNNNNGTAYC	2 cut(s)	554, 587
BalI	TGGCCA	2 cut(s)	234, 1218
BbsI	GAAGAC	2 cut(s)	348, 1484
BbvI	GCAGC	3 cut(s)	233, 835, 838
BccI	CCATC	5 cut(s)	191, 659, 709, 1025, 1166
BceAI	ACGGC	1 cut(s)	586
BciT130I	CCWGG	4 cut(s)	119, 575, 683, 1220
BciVI	GTATCC	2 cut(s)	615, 1386
BcoDI	GTCTC	4 cut(s)	832, 1007, 1273, 1511
BfaI	CTAG	1 cut(s)	1322
BfmI	CTRYAG	3 cut(s)	80, 733, 1249
BfoI	RGCGCY	1 cut(s)	227
BfuI	GTATCC	2 cut(s)	615, 1386
BglII	AGATCT	3 cut(s)	76, 610, 721
BisI	GCNGC	3 cut(s)	222, 824, 827
BlnI	CCTAGG	1 cut(s)	1321
BlsI	GCNGC	3 cut(s)	223, 825, 828
Bme1390I	CCNGG	4 cut(s)	119, 575, 683, 1220
Bme18I	GGWCC	2 cut(s)	115, 764
BmeT110I	CYCGRG	1 cut(s)	17
BmgT120I	GGNCC	2 cut(s)	115, 764
BmiI	GGNNCC	2 cut(s)	90, 369
BmrFI	CCNGG	4 cut(s)	119, 575, 683, 1220
BmsI	GCATC	3 cut(s)	319, 322, 916
BpiI	GAAGAC	2 cut(s)	348, 1484
BpuEI	CTTGAG	1 cut(s)	587
BsaAI	YACGTR	1 cut(s)	293
BsaHI	GRCGYC	1 cut(s)	322
BsaI	GGTCTC	2 cut(s)	1007, 1511
BsaJI	CCNNGG	4 cut(s)	118, 1213, 1321, 1501
BsaWI	WCCGGW	1 cut(s)	618
BsaXI	ACNNNNNCTCC	2 cut(s)	80, 110
Bsc4I	CCNNNNNNNGG	4 cut(s)	364, 908, 1023, 1219
Bse1I	ACTGG	3 cut(s)	436, 756, 1196
Bse3DI	GCAATG	1 cut(s)	406
BseBI	CCWGG	4 cut(s)	119, 575, 683, 1220
BseDI	CCNNGG	4 cut(s)	118, 1213, 1321, 1501
BseGI	GGATG	4 cut(s)	202, 214, 310, 1177
BseLI	CCNNNNNNNGG	4 cut(s)	364, 908, 1023, 1219
BseMI	GCAATG	1 cut(s)	406
BseMII	CTCAG	2 cut(s)	156, 719
BseNI	ACTGG	3 cut(s)	436, 756, 1196
BseRI	GAGGAG	1 cut(s)	5
BseXI	GCAGC	3 cut(s)	233, 835, 838
Bsh1236I	CGCG	1 cut(s)	517
Bsh1285I	CGRYCG	1 cut(s)	277
BshFI	GGCC	6 cut(s)	234, 681, 980, 1212, 1218, 1426
BsiEI	CGRYCG	1 cut(s)	277
BsiHKCI	CYCGRG	1 cut(s)	17
BsiSI	CCGG	1 cut(s)	619
BslFI	GGGAC	2 cut(s)	135, 262
BslI	CCNNNNNNNGG	4 cut(s)	364, 908, 1023, 1219
BsmAI	GTCTC	4 cut(s)	832, 1007, 1273, 1511
BsmFI	GGGAC	2 cut(s)	135, 262
BsmI	GAATGC	1 cut(s)	1317
BsnI	GGCC	6 cut(s)	234, 681, 980, 1212, 1218, 1426
Bso31I	GGTCTC	2 cut(s)	1007, 1511
BsoBI	CYCGRG	1 cut(s)	17
Bsp143I	GATC	6 cut(s)	76, 274, 610, 721, 1450, 1489
BspACI	CCGC	3 cut(s)	515, 821, 1148
BspANI	GGCC	6 cut(s)	234, 681, 980, 1212, 1218, 1426
BspCNI	CTCAG	2 cut(s)	157, 718
BspFNI	CGCG	1 cut(s)	517
BspLI	GGNNCC	2 cut(s)	90, 369
BspQI	GCTCTTC	1 cut(s)	645
BspTNI	GGTCTC	2 cut(s)	1007, 1511
BsrDI	GCAATG	1 cut(s)	406
BsrI	ACTGG	3 cut(s)	436, 756, 1196
BssECI	CCNNGG	4 cut(s)	118, 1213, 1321, 1501
BssMI	GATC	6 cut(s)	76, 274, 610, 721, 1450, 1489
BssNI	GRCGYC	1 cut(s)	322
BssT1I	CCWWGG	3 cut(s)	1213, 1321, 1501
Bst2UI	CCWGG	4 cut(s)	119, 575, 683, 1220
Bst4CI	ACNGT	6 cut(s)	96, 715, 737, 742, 1053, 1133
Bst6I	CTCTTC	3 cut(s)	36, 645, 1382
BstACI	GRCGYC	1 cut(s)	322
BstBAI	YACGTR	1 cut(s)	293
BstC8I	GCNNGC	2 cut(s)	355, 831
BstDEI	CTNAG	3 cut(s)	165, 630, 705
BstENI	CCTNNNNNAGG	2 cut(s)	362, 1217
BstF5I	GGATG	4 cut(s)	202, 214, 310, 1177
BstFNI	CGCG	1 cut(s)	517
BstH2I	RGCGCY	1 cut(s)	227
BstHHI	GCGC	1 cut(s)	226
BstKTI	GATC	6 cut(s)	79, 277, 613, 724, 1453, 1492
BstMAI	GTCTC	4 cut(s)	832, 1007, 1273, 1511
BstMBI	GATC	6 cut(s)	76, 274, 610, 721, 1450, 1489
BstMCI	CGRYCG	1 cut(s)	277
BstMWI	GCNNNNNNNGC	2 cut(s)	598, 791
BstNI	CCWGG	4 cut(s)	119, 575, 683, 1220
BstSCI	CCNGG	4 cut(s)	117, 573, 681, 1218
BstSFI	CTRYAG	3 cut(s)	80, 733, 1249
BstUI	CGCG	1 cut(s)	517
BstV1I	GCAGC	3 cut(s)	233, 835, 838
BstV2I	GAAGAC	2 cut(s)	348, 1484
BstX2I	RGATCY	3 cut(s)	76, 610, 721
BstXI	CCANNNNNNTGG	1 cut(s)	1167
BstYI	RGATCY	3 cut(s)	76, 610, 721
BsuI	GTATCC	2 cut(s)	615, 1386
BsuRI	GGCC	6 cut(s)	234, 681, 980, 1212, 1218, 1426
BtsCI	GGATG	4 cut(s)	202, 214, 310, 1177
BtsIMutI	CAGTG	2 cut(s)	162, 391
Cac8I	GCNNGC	2 cut(s)	355, 831
CfoI	GCGC	1 cut(s)	226
Cfr13I	GGNCC	2 cut(s)	115, 764
CsiI	ACCWGGT	1 cut(s)	573
Csp6I	GTAC	5 cut(s)	409, 439, 571, 738, 816
CviAII	CATG	5 cut(s)	139, 422, 544, 941, 1208
CviQI	GTAC	5 cut(s)	409, 439, 571, 738, 816
DdeI	CTNAG	3 cut(s)	165, 630, 705
DpnI	GATC	6 cut(s)	78, 276, 612, 723, 1452, 1491
DpnII	GATC	6 cut(s)	76, 274, 610, 721, 1450, 1489
DraI	TTTAAA	2 cut(s)	1228, 1288
DrdI	GACNNNNNNGTC	1 cut(s)	113
DseDI	GACNNNNNNGTC	1 cut(s)	113
EaeI	YGGCCR	2 cut(s)	232, 1216
Eam1104I	CTCTTC	3 cut(s)	36, 645, 1382
EarI	CTCTTC	3 cut(s)	36, 645, 1382
Eco130I	CCWWGG	3 cut(s)	1213, 1321, 1501
Eco147I	AGGCCT	1 cut(s)	681
Eco31I	GGTCTC	2 cut(s)	1007, 1511
Eco47I	GGWCC	2 cut(s)	115, 764
Eco47III	AGCGCT	1 cut(s)	225
Eco57I	CTGAAG	4 cut(s)	380, 545, 824, 1172
Eco88I	CYCGRG	1 cut(s)	17
EcoNI	CCTNNNNNAGG	2 cut(s)	362, 1217
EcoO109I	RGGNCCY	1 cut(s)	764
EcoRII	CCWGG	4 cut(s)	117, 573, 681, 1218
EcoT14I	CCWWGG	3 cut(s)	1213, 1321, 1501
ErhI	CCWWGG	3 cut(s)	1213, 1321, 1501
FaeI	CATG	5 cut(s)	142, 425, 547, 944, 1211
FalI	AAGNNNNNCTT	6 cut(s)	298, 330, 549, 581, 1255, 1287
FaqI	GGGAC	2 cut(s)	135, 262
FatI	CATG	5 cut(s)	138, 421, 543, 940, 1207
FauNDI	CATATG	1 cut(s)	1063
FblI	GTMKAC	2 cut(s)	8, 579
Fnu4HI	GCNGC	3 cut(s)	222, 824, 827
FokI	GGATG	4 cut(s)	209, 221, 297, 1184
Fsp4HI	GCNGC	3 cut(s)	222, 824, 827
FspBI	CTAG	1 cut(s)	1322
GlaI	GCGC	1 cut(s)	225
GluI	GCNGC	3 cut(s)	222, 824, 827
HaeII	RGCGCY	1 cut(s)	227
HaeIII	GGCC	6 cut(s)	234, 681, 980, 1212, 1218, 1426
HapII	CCGG	1 cut(s)	619
HhaI	GCGC	1 cut(s)	226
Hin1I	GRCGYC	1 cut(s)	322
Hin1II	CATG	5 cut(s)	142, 425, 547, 944, 1211
Hin6I	GCGC	1 cut(s)	224
HinP1I	GCGC	1 cut(s)	224
HincII	GTYRAC	2 cut(s)	9, 1059
HindII	GTYRAC	2 cut(s)	9, 1059
HinfI	GANTC	4 cut(s)	10, 146, 944, 1326
HpaII	CCGG	1 cut(s)	619
HphI	GGTGA	1 cut(s)	151
Hpy166II	GTNNAC	5 cut(s)	9, 521, 580, 1059, 1414
Hpy188I	TCNGA	4 cut(s)	643, 949, 1489, 1514
Hpy188III	TCNNGA	6 cut(s)	38, 318, 614, 725, 847, 1454
Hpy8I	GTNNAC	5 cut(s)	9, 521, 580, 1059, 1414
Hpy99I	CGWCG	1 cut(s)	10
HpyAV	CCTTC	9 cut(s)	79, 324, 355, 389, 671, 799, 1082, 1260, 1451
HpyCH4III	ACNGT	6 cut(s)	96, 715, 737, 742, 1053, 1133
HpyCH4IV	ACGT	3 cut(s)	292, 322, 1084
HpyCH4V	TGCA	6 cut(s)	221, 421, 607, 662, 968, 999
HpyF10VI	GCNNNNNNNGC	2 cut(s)	598, 791
HpyF3I	CTNAG	3 cut(s)	165, 630, 705
HpySE526I	ACGT	3 cut(s)	292, 322, 1084
Hsp92I	GRCGYC	1 cut(s)	322
Hsp92II	CATG	5 cut(s)	142, 425, 547, 944, 1211
HspAI	GCGC	1 cut(s)	224
Kzo9I	GATC	6 cut(s)	76, 274, 610, 721, 1450, 1489
LguI	GCTCTTC	1 cut(s)	645
LmnI	GCTCC	3 cut(s)	35, 58, 88
Lsp1109I	GCAGC	3 cut(s)	233, 835, 838
LweI	GCATC	3 cut(s)	319, 322, 916
MabI	ACCWGGT	1 cut(s)	573
MaeI	CTAG	1 cut(s)	1322
MaeII	ACGT	3 cut(s)	292, 322, 1084
MaeIII	GTNAC	2 cut(s)	134, 1460
MalI	GATC	6 cut(s)	78, 276, 612, 723, 1452, 1491
MboI	GATC	6 cut(s)	76, 274, 610, 721, 1450, 1489
MflI	RGATCY	3 cut(s)	76, 610, 721
MlsI	TGGCCA	2 cut(s)	234, 1218
MluCI	AATT	6 cut(s)	266, 372, 452, 1000, 1109, 1379
MluNI	TGGCCA	2 cut(s)	234, 1218
MlyI	GAGTC	3 cut(s)	4, 155, 953
MmeI	TCCRAC	1 cut(s)	36
Mox20I	TGGCCA	2 cut(s)	234, 1218
MroXI	GAANNNNTTC	1 cut(s)	696
MscI	TGGCCA	2 cut(s)	234, 1218
MseI	TTAA	2 cut(s)	1227, 1287
Msp20I	TGGCCA	2 cut(s)	234, 1218
MspA1I	CMGCKG	1 cut(s)	1150
MspI	CCGG	1 cut(s)	619
MspR9I	CCNGG	4 cut(s)	119, 575, 683, 1220
Mva1269I	GAATGC	1 cut(s)	1317
MvaI	CCWGG	4 cut(s)	119, 575, 683, 1220
MvnI	CGCG	1 cut(s)	517
MwoI	GCNNNNNNNGC	2 cut(s)	598, 791
NdeI	CATATG	1 cut(s)	1063
NdeII	GATC	6 cut(s)	76, 274, 610, 721, 1450, 1489
NlaIII	CATG	5 cut(s)	142, 425, 547, 944, 1211
NlaIV	GGNNCC	2 cut(s)	90, 369
NmeAIII	GCCGAG	1 cut(s)	859
NmuCI	GTSAC	1 cut(s)	134
PaeR7I	CTCGAG	1 cut(s)	17
PceI	AGGCCT	1 cut(s)	681
PciSI	GCTCTTC	1 cut(s)	645
PctI	GAATGC	1 cut(s)	1317
PdmI	GAANNNNTTC	1 cut(s)	696
PfeI	GAWTC	1 cut(s)	1326
PkrI	GCNGC	3 cut(s)	223, 825, 828
Ple19I	CGATCG	1 cut(s)	277
PleI	GAGTC	3 cut(s)	4, 154, 952
PpsI	GAGTC	3 cut(s)	4, 154, 952
Ppu21I	YACGTR	1 cut(s)	293
PpuMI	RGGWCCY	1 cut(s)	764
Psp5II	RGGWCCY	1 cut(s)	764
Psp6I	CCWGG	4 cut(s)	117, 573, 681, 1218
PspGI	CCWGG	4 cut(s)	117, 573, 681, 1218
PspN4I	GGNNCC	2 cut(s)	90, 369
PspPI	GGNCC	2 cut(s)	115, 764
PspPPI	RGGWCCY	1 cut(s)	764
PspXI	VCTCGAGB	1 cut(s)	17
PsuI	RGATCY	3 cut(s)	76, 610, 721
PvuI	CGATCG	1 cut(s)	277
RsaI	GTAC	5 cut(s)	410, 440, 572, 739, 817
RsaNI	GTAC	5 cut(s)	409, 439, 571, 738, 816
SalI	GTCGAC	1 cut(s)	7
SapI	GCTCTTC	1 cut(s)	645
SaqAI	TTAA	2 cut(s)	1227, 1287
SatI	GCNGC	3 cut(s)	222, 824, 827
Sau3AI	GATC	6 cut(s)	76, 274, 610, 721, 1450, 1489
Sau96I	GGNCC	2 cut(s)	115, 764
SchI	GAGTC	3 cut(s)	4, 155, 953
ScrFI	CCNGG	4 cut(s)	119, 575, 683, 1220
SexAI	ACCWGGT	1 cut(s)	573
SfaNI	GCATC	3 cut(s)	319, 322, 916
SfcI	CTRYAG	3 cut(s)	80, 733, 1249
Sfr274I	CTCGAG	1 cut(s)	17
SinI	GGWCC	2 cut(s)	115, 764
SlaI	CTCGAG	1 cut(s)	17
SmlI	CTYRAG	2 cut(s)	17, 566
SmoI	CTYRAG	2 cut(s)	17, 566
Sse9I	AATT	6 cut(s)	266, 372, 452, 1000, 1109, 1379
SseBI	AGGCCT	1 cut(s)	681
SsiI	CCGC	3 cut(s)	515, 821, 1148
SspI	AATATT	1 cut(s)	473
SspMI	CTAG	1 cut(s)	1322
StuI	AGGCCT	1 cut(s)	681
StyD4I	CCNGG	4 cut(s)	117, 573, 681, 1218
StyI	CCWWGG	3 cut(s)	1213, 1321, 1501
TaaI	ACNGT	6 cut(s)	96, 715, 737, 742, 1053, 1133
TaiI	ACGT	3 cut(s)	295, 325, 1087
TaqI	TCGA	6 cut(s)	8, 18, 533, 744, 1020, 1361
TasI	AATT	6 cut(s)	266, 372, 452, 1000, 1109, 1379
TatI	WGTACW	2 cut(s)	438, 737
TfiI	GAWTC	1 cut(s)	1326
Tru1I	TTAA	2 cut(s)	1227, 1287
Tru9I	TTAA	2 cut(s)	1227, 1287
TscAI	CASTG	2 cut(s)	169, 391
TseFI	GTSAC	1 cut(s)	134
TseI	GCWGC	3 cut(s)	221, 823, 826
Tsp45I	GTSAC	1 cut(s)	134
TspDTI	ATGAA	7 cut(s)	201, 354, 560, 705, 1080, 1196, 1461
TspGWI	ACGGA	3 cut(s)	924, 936, 1323
TspRI	CASTG	2 cut(s)	169, 391
VpaK11BI	GGWCC	2 cut(s)	115, 764
XagI	CCTNNNNNAGG	2 cut(s)	362, 1217
XapI	RAATTY	2 cut(s)	266, 452
XhoI	CTCGAG	1 cut(s)	17
XmaJI	CCTAGG	1 cut(s)	1321
XmiI	GTMKAC	2 cut(s)	8, 579
XmnI	GAANNNNTTC	1 cut(s)	696
XspI	CTAG	1 cut(s)	1322
ZraI	GACGTC	1 cut(s)	323

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.