Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0009331

Physical Location & Seq

Genomic Coordinates Forward (+)

31208006 .. 31212613

Gene Structure 4608 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1219700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGTCGTCGACGCTGCTGGAGCAGACACGTGCAGCTCACGAGGAGGTGGAGCGGCTGGAGCGGCTGATAGTGAAGGACTTCATGAACGAGCCGCCGTCCAGCAAGGACCGCTTGTACCAGGGCCACCGCGTCCGCCAGCTGATCGACACCATCACCTCCACCACCGAAAAACTTATTGAGATCTATGAAGATAAAGATAATGCGAGGAAGGACGAGATTGCGGCTCTCGGAGGCCAGACTGCCACTGGCACCAACGTTTTCAGCGCATTTTATGATAGATTGAAGGAGATTCGTGAGTATCACCGAAAGCATCCAGTTGCTCGTGTTGTTGATGCTAATGAGGAAGAAGAAGCACTGCTTAAGGAGGAGCCTCAAATCGAGTTCAGTGGAGAGGAAGCTTTTGGACGATACCTTGACTTGCATGAACTATACAACCAGTATATTAATTCCAAATTTGGAGAACCTATTGAGTACTCTGCTTACCTTGATACTATTTCACAACCACAAAAGATTCCTCGCAAGCTGAAGTCGTCAAGGCAGTACAGGGAATATATGGAAAATCTACTCGCATATCTGATATATTTTTTCCAGAGGACAGAGCCTTTGCAAGATCTTGACAGGATATTTTTGAAGGTTGAAACTGAATTTGAAGAGCAATGGGCAGATGGTAAGGTAAAAGGATGGGAAAATGAGAAGCAAGAAAATGGGCATGTTCAAGATCAGCTTACTATGATTGATCTTGATTATTATAGCACGGTGGAAGAACTTATGGAAGTGGGTCCGGAAAAGCTAAAGGAGGCACTAGCATCATTAGGACTGAAGACGGGTGGTACTGTTCAGCAGCGTGCAGAGAGGCTTTTCCTTACAAAGGACACACCTCTGGAGAAGTTGGACAAGAAACATTTTGCCAAAGGTTCGCATGGTGCTGAACAAAATGGGGCTGCTGCAGCTCCACAACAAGTTGACAATTTAAAAGAAATTGCTTTATTGGAGGCTAAAACGAAAAAATTATGCGACTTACTGAGTGAGGCTATTGAAAGAACAAGAGACAACATCATGAAGAAACAGGCTTTGACATATGAAGAAATTGAAGCAGAACGTGAAGAGGAAGAGACGCAGGCCGATACTGAAAGTGATGATGATGAACAACAGATTTACAATCCACTGAAATTGCCAATGGGTTGGGATGGGAAGCCCATTCCGTACTGGCTGTATAAGCTTCATGGTCTTGGTCAGGAATTCAAGTGTGAGATTTGCGGGAATTACAGTTACTGGGGACGTAGAGCTTTCGAGAGACATTTTAAGGAATGGCGCCATCAGCATGGTATGCGTTGCCTTGGCATACCGAACACCAAGAACTTCAATGAGATCACATCAATTGAGGAGGCTAAAGAACTCTGGAAGAGGATACAAGCACGACAAGGTGTGAACAAGTGGCGCCCGGATCTTGAAGAGGAGTACGAAGACAGAGAGGGTAACATATACAATAAGAAGACATACACCGATCTGCAGCGACAGGGACTGATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005737 GO:0005829 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0022607 GO:0022613 GO:0022618 GO:0031974 GO:0031981 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043900 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045694 GO:0046483 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0065003 GO:0065007 GO:0070013 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990904 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DUF3449 SF3A3 SF3a60_bindingd Telomere_Sde2_2

Protein Analysis

510

Amino Acids

59.73

Weight (kDa)

5.12

Isoelectric Point (pI)

40.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SF3a60_bindingd	PF12108	80 - 105	4.5e-12	Splicing factor SF3a60 binding domain
SF3A3	PF16837	127 - 175	1e-17	Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9
SDE2_2C	PF13297	223 - 304	1.4e-29	Replication stress response SDE2 C-terminal
SF3a60_Prp9_C	PF11931	390 - 509	5.3e-57	SF3a60/Prp9 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0009331)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06160
fragaria_vesca	FvH4_1g22860 FvH4_5g28470 FvH4_7g05370 FvH4_7g06390
malus_domestica	MD01G1219700.v1.1 MD07G1290300.v1.1
prunus_persica	Prupe.2G311500_v2.0.a1
pyrus_communis	pycom01g22950 pycom07g26290
rosa_chinensis	RchiOBHm_Chr1g0331941
rosa_laevigata	RLG00000025855 RLG00000029702
rosa_multiflora	Rmu_sc0004874.1_g000018 Rmu_sc0008128.1_g000009
rosa_roxburghii	Rroxscaffold_4G00318600
rosa_rugosa	Rorug01G0097000
rosa_samantha	Rh1AG121100 Rh1BG092700 Rh1CG115900 Rh1DG127000
rosa_wichuraiana	Rw1G009880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	248, 1311, 1437
AccBSI	CCGCTC	2 cut(s)	52, 61
AccI	GTMKAC	1 cut(s)	8
AccII	CGCG	1 cut(s)	129
AccIII	TCCGGA	1 cut(s)	781
AciI	CCGC	8 cut(s)	52, 61, 92, 109, 127, 133, 221, 1257
AclI	AACGTT	1 cut(s)	255
AclWI	GGATC	1 cut(s)	1452
AcsI	RAATTY	3 cut(s)	452, 644, 1238
AcuI	CTGAAG	2 cut(s)	545, 839
AcvI	CACGTG	1 cut(s)	29
AcyI	GRCGYC	2 cut(s)	1312, 1438
AfaI	GTAC	6 cut(s)	116, 473, 542, 832, 1205, 1460
AfiI	CCNNNNNNNGG	1 cut(s)	868
AflII	CTTAAG	1 cut(s)	359
AflIII	ACRYGT	1 cut(s)	26
AjnI	CCWGG	1 cut(s)	117
AluBI	AGCT	9 cut(s)	35, 139, 398, 523, 724, 790, 950, 1219, 1286
AluI	AGCT	9 cut(s)	35, 139, 398, 523, 724, 790, 950, 1219, 1286
Alw26I	GTCTC	3 cut(s)	1041, 1106, 1288
AlwI	GGATC	1 cut(s)	1452
AlwNI	CAGNNNCTG	2 cut(s)	1272, 1522
Aor13HI	TCCGGA	1 cut(s)	781
AoxI	GGCC	3 cut(s)	121, 232, 1119
ApeKI	GCWGC	7 cut(s)	13, 32, 841, 941, 944, 947, 1510
ApoI	RAATTY	3 cut(s)	452, 644, 1238
ArsI	GACNNNNNNTTYG	2 cut(s)	586, 618
AseI	ATTAAT	1 cut(s)	444
Asp700I	GAANNNNTTC	1 cut(s)	77
AspLEI	GCGC	3 cut(s)	266, 1314, 1440
AspS9I	GGNCC	3 cut(s)	106, 121, 779
AsuC2I	CCSGG	1 cut(s)	1442
AsuHPI	GGTGA	2 cut(s)	145, 293
AvaII	GGWCC	2 cut(s)	106, 779
BanI	GGYRCC	3 cut(s)	248, 1311, 1437
BauI	CACGAG	2 cut(s)	38, 321
BbrPI	CACGTG	1 cut(s)	29
BbsI	GAAGAC	3 cut(s)	827, 1470, 1499
BbvI	GCAGC	6 cut(s)	44, 853, 928, 931, 959, 1522
BccI	CCATC	5 cut(s)	158, 659, 675, 1181, 1323
BceAI	ACGGC	1 cut(s)	79
BciT130I	CCWGG	1 cut(s)	119
BciVI	GTATCC	1 cut(s)	1401
BcnI	CCSGG	1 cut(s)	1442
BcoDI	GTCTC	3 cut(s)	1041, 1106, 1288
BfaI	CTAG	1 cut(s)	803
BfmI	CTRYAG	2 cut(s)	945, 1508
BfoI	RGCGCY	2 cut(s)	1315, 1441
BfrI	CTTAAG	1 cut(s)	359
BfuI	GTATCC	1 cut(s)	1401
BglII	AGATCT	2 cut(s)	180, 610
BmcAI	AGTACT	1 cut(s)	473
Bme1390I	CCNGG	2 cut(s)	119, 1442
Bme18I	GGWCC	2 cut(s)	106, 779
BmgT120I	GGNCC	3 cut(s)	106, 121, 779
BmiI	GGNNCC	5 cut(s)	250, 369, 780, 1313, 1439
BmrFI	CCNGG	2 cut(s)	119, 1442
BmrI	ACTGGG	1 cut(s)	1282
BmsI	GCATC	3 cut(s)	319, 322, 815
BmuI	ACTGGG	1 cut(s)	1282
BpiI	GAAGAC	3 cut(s)	827, 1470, 1499
BpmI	CTGGAG	3 cut(s)	38, 77, 902
BpuMI	CCSGG	1 cut(s)	1442
BsaAI	YACGTR	1 cut(s)	29
BsaHI	GRCGYC	2 cut(s)	1312, 1438
BsaJI	CCNNGG	2 cut(s)	118, 1336
BsaWI	WCCGGW	1 cut(s)	781
Bsc4I	CCNNNNNNNGG	1 cut(s)	868
Bse1I	ACTGG	5 cut(s)	250, 314, 436, 1211, 1277
Bse3DI	GCAATG	1 cut(s)	662
BseAI	TCCGGA	1 cut(s)	781
BseBI	CCWGG	1 cut(s)	119
BseDI	CCNNGG	2 cut(s)	118, 1336
BseGI	GGATG	3 cut(s)	310, 686, 1192
BseLI	CCNNNNNNNGG	1 cut(s)	868
BseMI	GCAATG	1 cut(s)	662
BseMII	CTCAG	1 cut(s)	1013
BseNI	ACTGG	5 cut(s)	250, 314, 436, 1211, 1277
BseRI	GAGGAG	4 cut(s)	56, 380, 1397, 1469
BseXI	GCAGC	6 cut(s)	44, 853, 928, 931, 959, 1522
BsgI	GTGCAG	2 cut(s)	51, 867
Bsh1236I	CGCG	1 cut(s)	129
BshFI	GGCC	3 cut(s)	123, 234, 1121
BshNI	GGYRCC	3 cut(s)	248, 1311, 1437
BsiSI	CCGG	2 cut(s)	782, 1442
BslFI	GGGAC	1 cut(s)	1290
BslI	CCNNNNNNNGG	1 cut(s)	868
BsmAI	GTCTC	3 cut(s)	1041, 1106, 1288
BsmBI	CGTCTC	1 cut(s)	1106
BsmFI	GGGAC	1 cut(s)	1290
BsnI	GGCC	3 cut(s)	123, 234, 1121
Bsp13I	TCCGGA	1 cut(s)	781
Bsp143I	GATC	8 cut(s)	141, 180, 610, 718, 736, 1368, 1444, 1504
BspACI	CCGC	8 cut(s)	52, 61, 92, 109, 127, 133, 221, 1257
BspANI	GGCC	3 cut(s)	123, 234, 1121
BspCNI	CTCAG	1 cut(s)	1014
BspEI	TCCGGA	1 cut(s)	781
BspFNI	CGCG	1 cut(s)	129
BspHI	TCATGA	2 cut(s)	81, 1056
BspLI	GGNNCC	5 cut(s)	250, 369, 780, 1313, 1439
BspMAI	CTGCAG	2 cut(s)	949, 1512
BspPI	GGATC	1 cut(s)	1452
BspQI	GCTCTTC	1 cut(s)	645
BspT107I	GGYRCC	3 cut(s)	248, 1311, 1437
BspTI	CTTAAG	1 cut(s)	359
BsrBI	CCGCTC	2 cut(s)	52, 61
BsrDI	GCAATG	1 cut(s)	662
BsrI	ACTGG	5 cut(s)	250, 314, 436, 1211, 1277
BssECI	CCNNGG	2 cut(s)	118, 1336
BssMI	GATC	8 cut(s)	141, 180, 610, 718, 736, 1368, 1444, 1504
BssNI	GRCGYC	2 cut(s)	1312, 1438
BssSI	CACGAG	2 cut(s)	38, 321
BssT1I	CCWWGG	1 cut(s)	1336
Bst2BI	CACGAG	2 cut(s)	38, 321
Bst2UI	CCWGG	1 cut(s)	119
Bst4CI	ACNGT	3 cut(s)	757, 835, 1268
Bst6I	CTCTTC	5 cut(s)	645, 1098, 1104, 1397, 1446
BstACI	GRCGYC	2 cut(s)	1312, 1438
BstAFI	CTTAAG	1 cut(s)	359
BstAPI	GCANNNNNTGC	1 cut(s)	1327
BstBAI	YACGTR	1 cut(s)	29
BstC8I	GCNNGC	4 cut(s)	137, 521, 846, 1119
BstDEI	CTNAG	1 cut(s)	1022
BstENI	CCTNNNNNAGG	1 cut(s)	866
BstF5I	GGATG	3 cut(s)	310, 686, 1192
BstFNI	CGCG	1 cut(s)	129
BstH2I	RGCGCY	2 cut(s)	1315, 1441
BstHHI	GCGC	3 cut(s)	266, 1314, 1440
BstKTI	GATC	8 cut(s)	144, 183, 613, 721, 739, 1371, 1447, 1507
BstMAI	GTCTC	3 cut(s)	1041, 1106, 1288
BstMBI	GATC	8 cut(s)	141, 180, 610, 718, 736, 1368, 1444, 1504
BstMWI	GCNNNNNNNGC	8 cut(s)	19, 58, 61, 108, 947, 1216, 1318, 1327
BstNI	CCWGG	1 cut(s)	119
BstNSI	RCATGY	1 cut(s)	713
BstSCI	CCNGG	2 cut(s)	117, 1440
BstSFI	CTRYAG	2 cut(s)	945, 1508
BstUI	CGCG	1 cut(s)	129
BstV1I	GCAGC	6 cut(s)	44, 853, 928, 931, 959, 1522
BstV2I	GAAGAC	3 cut(s)	827, 1470, 1499
BstX2I	RGATCY	3 cut(s)	180, 610, 1444
BstXI	CCANNNNNNTGG	2 cut(s)	1182, 1322
BstYI	RGATCY	3 cut(s)	180, 610, 1444
BsuI	GTATCC	1 cut(s)	1401
BsuRI	GGCC	3 cut(s)	123, 234, 1121
BtsCI	GGATG	3 cut(s)	310, 686, 1192
BtsI	GCAGTG	1 cut(s)	353
BtsIMutI	CAGTG	4 cut(s)	243, 353, 391, 1163
Cac8I	GCNNGC	4 cut(s)	137, 521, 846, 1119
CaiI	CAGNNNCTG	2 cut(s)	1272, 1522
CciI	TCATGA	2 cut(s)	81, 1056
CfoI	GCGC	3 cut(s)	266, 1314, 1440
Cfr13I	GGNCC	3 cut(s)	106, 121, 779
CseI	GACGC	3 cut(s)	19, 118, 1123
Csp6I	GTAC	6 cut(s)	115, 472, 541, 831, 1204, 1459
CspCI	CAANNNNNGTGG	2 cut(s)	1152, 1187
CviAII	CATG	7 cut(s)	82, 422, 710, 920, 1057, 1223, 1322
CviQI	GTAC	6 cut(s)	115, 472, 541, 831, 1204, 1459
DdeI	CTNAG	1 cut(s)	1022
DinI	GGCGCC	2 cut(s)	1313, 1439
DpnI	GATC	8 cut(s)	143, 182, 612, 720, 738, 1370, 1446, 1506
DpnII	GATC	8 cut(s)	141, 180, 610, 718, 736, 1368, 1444, 1504
DraI	TTTAAA	1 cut(s)	972
Eam1104I	CTCTTC	5 cut(s)	645, 1098, 1104, 1397, 1446
EarI	CTCTTC	5 cut(s)	645, 1098, 1104, 1397, 1446
EciI	GGCGGA	1 cut(s)	122
Eco130I	CCWWGG	1 cut(s)	1336
Eco47I	GGWCC	2 cut(s)	106, 779
Eco57I	CTGAAG	2 cut(s)	545, 839
Eco72I	CACGTG	1 cut(s)	29
EcoNI	CCTNNNNNAGG	1 cut(s)	866
EcoRI	GAATTC	1 cut(s)	1238
EcoRII	CCWGG	1 cut(s)	117
EcoT14I	CCWWGG	1 cut(s)	1336
EgeI	GGCGCC	2 cut(s)	1313, 1439
EheI	GGCGCC	2 cut(s)	1313, 1439
ErhI	CCWWGG	1 cut(s)	1336
Esp3I	CGTCTC	1 cut(s)	1106
FaeI	CATG	7 cut(s)	85, 425, 713, 923, 1060, 1226, 1325
FalI	AAGNNNNNCTT	6 cut(s)	95, 127, 342, 374, 708, 740
FaqI	GGGAC	1 cut(s)	1290
FatI	CATG	7 cut(s)	81, 421, 709, 919, 1056, 1222, 1321
FauI	CCCGC	1 cut(s)	1250
FauNDI	CATATG	1 cut(s)	1078
FblI	GTMKAC	1 cut(s)	8
FokI	GGATG	3 cut(s)	297, 693, 1199
FspBI	CTAG	1 cut(s)	803
GlaI	GCGC	3 cut(s)	265, 1313, 1439
GsuI	CTGGAG	3 cut(s)	38, 77, 902
HaeII	RGCGCY	2 cut(s)	1315, 1441
HaeIII	GGCC	3 cut(s)	123, 234, 1121
HapII	CCGG	2 cut(s)	782, 1442
HgaI	GACGC	3 cut(s)	19, 118, 1123
HhaI	GCGC	3 cut(s)	266, 1314, 1440
Hin1I	GRCGYC	2 cut(s)	1312, 1438
Hin1II	CATG	7 cut(s)	85, 425, 713, 923, 1060, 1226, 1325
Hin6I	GCGC	3 cut(s)	264, 1312, 1438
HinP1I	GCGC	3 cut(s)	264, 1312, 1438
HincII	GTYRAC	2 cut(s)	9, 964
HindII	GTYRAC	2 cut(s)	9, 964
HindIII	AAGCTT	2 cut(s)	396, 1217
HinfI	GANTC	2 cut(s)	289, 511
HpaII	CCGG	2 cut(s)	782, 1442
HphI	GGTGA	2 cut(s)	145, 293
Hpy166II	GTNNAC	3 cut(s)	9, 964, 1429
Hpy188I	TCNGA	2 cut(s)	230, 576
Hpy8I	GTNNAC	3 cut(s)	9, 964, 1429
Hpy99I	CGWCG	2 cut(s)	10, 13
HpyAV	CCTTC	4 cut(s)	67, 202, 277, 625
HpyCH4III	ACNGT	3 cut(s)	757, 835, 1268
HpyCH4IV	ACGT	4 cut(s)	28, 255, 1099, 1279
HpyCH4V	TGCA	6 cut(s)	32, 421, 607, 848, 947, 1510
HpyF10VI	GCNNNNNNNGC	8 cut(s)	19, 58, 61, 108, 947, 1216, 1318, 1327
HpyF3I	CTNAG	1 cut(s)	1022
HpySE526I	ACGT	4 cut(s)	28, 255, 1099, 1279
Hsp92I	GRCGYC	2 cut(s)	1312, 1438
Hsp92II	CATG	7 cut(s)	85, 425, 713, 923, 1060, 1226, 1325
HspAI	GCGC	3 cut(s)	264, 1312, 1438
KasI	GGCGCC	2 cut(s)	1311, 1437
Kpn2I	TCCGGA	1 cut(s)	781
Kzo9I	GATC	8 cut(s)	141, 180, 610, 718, 736, 1368, 1444, 1504
LguI	GCTCTTC	1 cut(s)	645
LmnI	GCTCC	5 cut(s)	19, 49, 58, 367, 955
Lsp1109I	GCAGC	6 cut(s)	44, 853, 928, 931, 959, 1522
LweI	GCATC	3 cut(s)	319, 322, 815
MaeI	CTAG	1 cut(s)	803
MaeII	ACGT	4 cut(s)	28, 255, 1099, 1279
MaeIII	GTNAC	2 cut(s)	1268, 1475
MalI	GATC	8 cut(s)	143, 182, 612, 720, 738, 1370, 1446, 1506
MbiI	CCGCTC	2 cut(s)	52, 61
MboI	GATC	8 cut(s)	141, 180, 610, 718, 736, 1368, 1444, 1504
MfeI	CAATTG	1 cut(s)	1377
MflI	RGATCY	3 cut(s)	180, 610, 1444
Mly113I	GGCGCC	2 cut(s)	1312, 1438
MmeI	TCCRAC	1 cut(s)	870
MroI	TCCGGA	1 cut(s)	781
MroXI	GAANNNNTTC	1 cut(s)	77
MseI	TTAA	5 cut(s)	360, 444, 971, 1302, 1528
MslI	CAYNNNNRTG	1 cut(s)	1320
MspA1I	CMGCKG	1 cut(s)	139
MspCI	CTTAAG	1 cut(s)	359
MspI	CCGG	2 cut(s)	782, 1442
MspR9I	CCNGG	2 cut(s)	119, 1442
MunI	CAATTG	1 cut(s)	1377
MvaI	CCWGG	1 cut(s)	119
MvnI	CGCG	1 cut(s)	129
MwoI	GCNNNNNNNGC	8 cut(s)	19, 58, 61, 108, 947, 1216, 1318, 1327
NarI	GGCGCC	2 cut(s)	1312, 1438
NciI	CCSGG	1 cut(s)	1442
NdeI	CATATG	1 cut(s)	1078
NdeII	GATC	8 cut(s)	141, 180, 610, 718, 736, 1368, 1444, 1504
NlaIII	CATG	7 cut(s)	85, 425, 713, 923, 1060, 1226, 1325
NlaIV	GGNNCC	5 cut(s)	250, 369, 780, 1313, 1439
NspI	RCATGY	1 cut(s)	713
PagI	TCATGA	2 cut(s)	81, 1056
PciSI	GCTCTTC	1 cut(s)	645
PdmI	GAANNNNTTC	1 cut(s)	77
PfeI	GAWTC	2 cut(s)	289, 511
PluTI	GGCGCC	2 cut(s)	1315, 1441
PmaCI	CACGTG	1 cut(s)	29
PmlI	CACGTG	1 cut(s)	29
Ppu21I	YACGTR	1 cut(s)	29
PshBI	ATTAAT	1 cut(s)	444
Psp1406I	AACGTT	1 cut(s)	255
Psp6I	CCWGG	1 cut(s)	117
PspCI	CACGTG	1 cut(s)	29
PspGI	CCWGG	1 cut(s)	117
PspN4I	GGNNCC	5 cut(s)	250, 369, 780, 1313, 1439
PspPI	GGNCC	3 cut(s)	106, 121, 779
PstI	CTGCAG	2 cut(s)	949, 1512
PstNI	CAGNNNCTG	2 cut(s)	1272, 1522
PsuI	RGATCY	3 cut(s)	180, 610, 1444
PvuII	CAGCTG	1 cut(s)	139
RsaI	GTAC	6 cut(s)	116, 473, 542, 832, 1205, 1460
RsaNI	GTAC	6 cut(s)	115, 472, 541, 831, 1204, 1459
RseI	CAYNNNNRTG	1 cut(s)	1320
SalI	GTCGAC	1 cut(s)	7
SapI	GCTCTTC	1 cut(s)	645
SaqAI	TTAA	5 cut(s)	360, 444, 971, 1302, 1528
Sau3AI	GATC	8 cut(s)	141, 180, 610, 718, 736, 1368, 1444, 1504
Sau96I	GGNCC	3 cut(s)	106, 121, 779
ScaI	AGTACT	1 cut(s)	473
ScrFI	CCNGG	2 cut(s)	119, 1442
SfaNI	GCATC	3 cut(s)	319, 322, 815
SfcI	CTRYAG	2 cut(s)	945, 1508
SfoI	GGCGCC	2 cut(s)	1313, 1439
SgrDI	CGTCGACG	1 cut(s)	7
SinI	GGWCC	2 cut(s)	106, 779
SmiMI	CAYNNNNRTG	1 cut(s)	1320
SmlI	CTYRAG	1 cut(s)	359
SmoI	CTYRAG	1 cut(s)	359
SsiI	CCGC	8 cut(s)	52, 61, 92, 109, 127, 133, 221, 1257
SspDI	GGCGCC	2 cut(s)	1311, 1437
SspMI	CTAG	1 cut(s)	803
StyD4I	CCNGG	2 cut(s)	117, 1440
StyI	CCWWGG	1 cut(s)	1336
TaaI	ACNGT	3 cut(s)	757, 835, 1268
TaiI	ACGT	4 cut(s)	31, 258, 1102, 1282
TaqI	TCGA	4 cut(s)	8, 144, 378, 1290
TatI	WGTACW	2 cut(s)	471, 540
TauI	GCSGC	4 cut(s)	55, 64, 94, 224
TfiI	GAWTC	2 cut(s)	289, 511
Tru1I	TTAA	5 cut(s)	360, 444, 971, 1302, 1528
Tru9I	TTAA	5 cut(s)	360, 444, 971, 1302, 1528
TscAI	CASTG	4 cut(s)	250, 360, 391, 1170
TseI	GCWGC	7 cut(s)	13, 32, 841, 941, 944, 947, 1510
TspDTI	ATGAA	8 cut(s)	70, 98, 201, 438, 1073, 1095, 1158, 1211
TspGWI	ACGGA	1 cut(s)	1191
TspRI	CASTG	4 cut(s)	250, 360, 391, 1170
Vha464I	CTTAAG	1 cut(s)	359
VpaK11BI	GGWCC	2 cut(s)	106, 779
VspI	ATTAAT	1 cut(s)	444
XagI	CCTNNNNNAGG	1 cut(s)	866
XapI	RAATTY	3 cut(s)	452, 644, 1238
XceI	RCATGY	1 cut(s)	713
XcmI	CCANNNNNNNNNTGG	1 cut(s)	242
XmiI	GTMKAC	1 cut(s)	8
XmnI	GAANNNNTTC	1 cut(s)	77
XspI	CTAG	1 cut(s)	803
ZrmI	AGTACT	1 cut(s)	473

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.