Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0009331

Physical Location & Seq

Genomic Coordinates Forward (+)

44812654 .. 44817186

Gene Structure 4533 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00318600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1386 bp

ATGGACCTATCAATCGGGCTGGTTGGTTTCCATCCTAGACTGATCCGTATTCTTCACGGGTGGGCATTTGAACCCGAACCCGTCCCGAGAAAATTAATTTTTGTTAGTCTGGCACAGTCCAATAGGGTACGTACACGTCATAAGTTATTTTTACCTGTCTCAGGAAACGAGGATAAAAACGTTTCTGATGTGAAAGTGAAGGGAGCGTTCTCAGTATTGGAGAGTCGAGAGAAACCAAGCCCTAACTGCAGCTCAGCTCAGCTCAGGGGGAGGCAGAAGAACAAGATGTCGTCGACGCTACTGGAGGTGACGCGTGGCGCTCACGAGGAGGTGGAGCGCTTGGAGCGTCTGATAGTGAAGGACCTTCAGAACGAGCCGGCGAGTAGCAAGGAACGCTTGGCTCAGAGCCACCGTGTCCGCCTCATGATCGACACCATTGAGATCTATGAGGATAACGATAATGCGAGGAAGGACGAGATTGCGGCTCTCGGTGGCCAAACTGCCACCGGCACCAATGTGTTCAGTGCATTCTATGATAGATTGAAAGAGATCCGTGAGTACCATAGGAGACATCCAGCTGCACTAGTTGTTGATGCTAATGAGGAACATGAAGCCCTGCTCAAGGAGGAGCCTCAAGTAGAGTTCAGTGGAGAGGCATTGGCTTCGTTAGGACTGAAGATAGGGGGTACCGTTCAGCAACGTGCAGAGAGGCTTTTACTTACAAAGGATACACCTCTGGAAAAGTTGGACAAGAAGCATTTTGCCAAAGGGTCACGTGGTTCAGCACAGAATGGGGCTGCTGTAGCTCCACAGCAAGTTGGCATGTTAAAAGAAATTGCTCTCTTGGAAGCCAAATTGAAAAAACTAAGCGACTTACTGAGTGAGGCTATTGAACGAACAAAAGACAACATTGTTAAGAAACAGGCTTTGACATATGAGGAAATTGCAGCAGAACGTGAGGATGAGGAGACACAGGCTGATACTGAAAGTGATGACGATGAGCAGCAGATTTATAATCCACTCAAATTGCCAATGGGTTGGGATGGGAAGCCCATACCTTACTGGCTGTATAAGCTTCATGGTCTTGGTCAGGAATTCAAGTGTGAGATATGTGGGAATCAGAGTTACTGGGGGCGTAGAGCTTTTGAGCGGCATTTTAAGGAATGGCGCCATCAGCATGGAATGCGTTGCCTTGGCATACCAAACACCAAGAACTTCAATGAGATCACATCAATTGAGGAAGCACAAGAATTGTGGAAGAGGATACAAGCACGGCAAGGGGTGAACAAGTGGCGCCCAGACCTTGAAGAAGAGTATGAAGACAGAGAGGGCAACATCTATAATAAAAAGACATATACTGATCTCCAGCGACAGGGACTAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005737 GO:0005829 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0022607 GO:0022613 GO:0022618 GO:0031974 GO:0031981 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043900 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045694 GO:0046483 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0065003 GO:0065007 GO:0070013 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990904 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DUF3449 SF3A3 SF3a60_bindingd Telomere_Sde2_2

Protein Analysis

461

Amino Acids

52.83

Weight (kDa)

6.54

Isoelectric Point (pI)

41.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SF3a60_bindingd	PF12108	167 - 192	3.8e-12	Splicing factor SF3a60 binding domain
SDE2_2C	PF13297	218 - 256	7.3e-14	Replication stress response SDE2 C-terminal
SF3a60_Prp9_C	PF11931	342 - 461	2.8e-57	SF3a60/Prp9 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009331)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06160
fragaria_vesca	FvH4_1g22860 FvH4_5g28470 FvH4_7g05370 FvH4_7g06390
malus_domestica	MD01G1219700.v1.1 MD07G1290300.v1.1
prunus_persica	Prupe.2G311500_v2.0.a1
pyrus_communis	pycom01g22950 pycom07g26290
rosa_chinensis	RchiOBHm_Chr1g0331941
rosa_laevigata	RLG00000025855 RLG00000029702
rosa_multiflora	Rmu_sc0004874.1_g000018 Rmu_sc0008128.1_g000009
rosa_roxburghii	Rroxscaffold_4G00318600
rosa_rugosa	Rorug01G0097000
rosa_samantha	Rh1AG121100 Rh1BG092700 Rh1CG115900 Rh1DG127000
rosa_wichuraiana	Rw1G009880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1014
Acc65I	GGTACC	1 cut(s)	686
AccB1I	GGYRCC	4 cut(s)	509, 686, 1167, 1293
AccBSI	CCGCTC	1 cut(s)	1150
AccI	GTMKAC	1 cut(s)	293
AccII	CGCG	1 cut(s)	313
AciI	CCGC	3 cut(s)	418, 482, 1150
AclI	AACGTT	1 cut(s)	180
AclWI	GGATC	2 cut(s)	37, 544
AcoI	YGGCCR	1 cut(s)	493
AcsI	RAATTY	1 cut(s)	1094
AcuI	CTGAAG	2 cut(s)	350, 695
AcvI	CACGTG	1 cut(s)	776
AcyI	GRCGYC	2 cut(s)	1168, 1294
AfaI	GTAC	4 cut(s)	129, 133, 560, 688
AfeI	AGCGCT	1 cut(s)	338
AfiI	CCNNNNNNNGG	3 cut(s)	161, 622, 1372
AflIII	ACRYGT	2 cut(s)	134, 311
AgsI	TTSAA	7 cut(s)	71, 544, 859, 893, 1099, 1219, 1307
AhlI	ACTAGT	1 cut(s)	583
AjiI	CACGTC	1 cut(s)	137
AleI	CACNNNNGTG	1 cut(s)	515
AluBI	AGCT	7 cut(s)	252, 257, 262, 578, 806, 1075, 1142
AluI	AGCT	7 cut(s)	252, 257, 262, 578, 806, 1075, 1142
Alw26I	GTCTC	3 cut(s)	163, 562, 962
AlwI	GGATC	2 cut(s)	37, 544
Ama87I	CYCGRG	1 cut(s)	85
Aor51HI	AGCGCT	1 cut(s)	338
AoxI	GGCC	1 cut(s)	493
ApeKI	GCWGC	5 cut(s)	249, 578, 797, 947, 1003
ApoI	RAATTY	1 cut(s)	1094
AseI	ATTAAT	1 cut(s)	95
Asp718I	GGTACC	1 cut(s)	686
AspLEI	GCGC	4 cut(s)	320, 339, 1170, 1296
AspS9I	GGNCC	2 cut(s)	4, 361
AsuHPI	GGTGA	2 cut(s)	319, 1294
AvaI	CYCGRG	1 cut(s)	85
AvaII	GGWCC	2 cut(s)	4, 361
BalI	TGGCCA	1 cut(s)	495
BanI	GGYRCC	4 cut(s)	509, 686, 1167, 1293
BauI	CACGAG	1 cut(s)	323
BbrPI	CACGTG	1 cut(s)	776
BbsI	GAAGAC	1 cut(s)	1326
BbvI	GCAGC	5 cut(s)	261, 565, 784, 959, 1015
BccI	CCATC	3 cut(s)	39, 1037, 1179
BceAI	ACGGC	1 cut(s)	1289
BcgI	CGANNNNNNTGC	2 cut(s)	645, 679
BciVI	GTATCC	2 cut(s)	721, 1257
BcoDI	GTCTC	3 cut(s)	163, 562, 962
BcuI	ACTAGT	1 cut(s)	583
BfaI	CTAG	2 cut(s)	36, 584
BfmI	CTRYAG	2 cut(s)	247, 801
BfoI	RGCGCY	4 cut(s)	321, 340, 1171, 1297
BfuI	GTATCC	2 cut(s)	721, 1257
BglII	AGATCT	1 cut(s)	441
BisI	GCNGC	7 cut(s)	250, 483, 579, 798, 948, 1004, 1151
BlpI	GCTNAGC	2 cut(s)	253, 258
BlsI	GCNGC	7 cut(s)	251, 484, 580, 799, 949, 1005, 1152
Bme18I	GGWCC	2 cut(s)	4, 361
BmeT110I	CYCGRG	1 cut(s)	85
BmgBI	CACGTC	1 cut(s)	137
BmgT120I	GGNCC	2 cut(s)	4, 361
BmiI	GGNNCC	5 cut(s)	511, 630, 688, 1169, 1295
BmrI	ACTGGG	1 cut(s)	1138
BmsI	GCATC	1 cut(s)	583
BmuI	ACTGGG	1 cut(s)	1138
BpiI	GAAGAC	1 cut(s)	1326
BpmI	CTGGAG	2 cut(s)	323, 1349
Bpu10I	CCTNAGC	1 cut(s)	263
Bpu1102I	GCTNAGC	2 cut(s)	253, 258
BpuEI	CTTGAG	2 cut(s)	605, 618
BsaAI	YACGTR	2 cut(s)	131, 776
BsaHI	GRCGYC	2 cut(s)	1168, 1294
BsaJI	CCNNGG	1 cut(s)	1192
Bsc4I	CCNNNNNNNGG	3 cut(s)	161, 622, 1372
Bse118I	RCCGGY	2 cut(s)	376, 506
Bse1I	ACTGG	3 cut(s)	306, 1067, 1133
BseDI	CCNNGG	1 cut(s)	1192
BseGI	GGATG	4 cut(s)	31, 571, 967, 1048
BseLI	CCNNNNNNNGG	3 cut(s)	161, 622, 1372
BseMII	CTCAG	7 cut(s)	174, 225, 267, 272, 277, 416, 869
BseNI	ACTGG	3 cut(s)	306, 1067, 1133
BseRI	GAGGAG	3 cut(s)	341, 641, 980
BseXI	GCAGC	5 cut(s)	261, 565, 784, 959, 1015
BsgI	GTGCAG	2 cut(s)	564, 723
Bsh1236I	CGCG	1 cut(s)	313
BshFI	GGCC	1 cut(s)	495
BshNI	GGYRCC	4 cut(s)	509, 686, 1167, 1293
BsiHKCI	CYCGRG	1 cut(s)	85
BsiSI	CCGG	2 cut(s)	377, 507
BslFI	GGGAC	1 cut(s)	68
BslI	CCNNNNNNNGG	3 cut(s)	161, 622, 1372
BsmAI	GTCTC	3 cut(s)	163, 562, 962
BsmFI	GGGAC	1 cut(s)	68
BsmI	GAATGC	2 cut(s)	527, 1188
BsnI	GGCC	1 cut(s)	495
BsoBI	CYCGRG	1 cut(s)	85
Bsp143I	GATC	6 cut(s)	42, 426, 441, 549, 1224, 1360
Bsp1720I	GCTNAGC	2 cut(s)	253, 258
BspACI	CCGC	3 cut(s)	418, 482, 1150
BspANI	GGCC	1 cut(s)	495
BspCNI	CTCAG	7 cut(s)	173, 224, 266, 271, 276, 415, 870
BspFNI	CGCG	1 cut(s)	313
BspHI	TCATGA	1 cut(s)	423
BspLI	GGNNCC	5 cut(s)	511, 630, 688, 1169, 1295
BspMAI	CTGCAG	1 cut(s)	251
BspPI	GGATC	2 cut(s)	37, 544
BspT107I	GGYRCC	4 cut(s)	509, 686, 1167, 1293
BsrBI	CCGCTC	1 cut(s)	1150
BsrFI	RCCGGY	2 cut(s)	376, 506
BsrI	ACTGG	3 cut(s)	306, 1067, 1133
BssAI	RCCGGY	2 cut(s)	376, 506
BssECI	CCNNGG	1 cut(s)	1192
BssMI	GATC	6 cut(s)	42, 426, 441, 549, 1224, 1360
BssNI	GRCGYC	2 cut(s)	1168, 1294
BssSI	CACGAG	1 cut(s)	323
BssT1I	CCWWGG	1 cut(s)	1192
Bst2BI	CACGAG	1 cut(s)	323
Bst4CI	ACNGT	3 cut(s)	117, 413, 691
Bst6I	CTCTTC	2 cut(s)	1253, 1305
BstACI	GRCGYC	2 cut(s)	1168, 1294
BstAPI	GCANNNNNTGC	1 cut(s)	1183
BstBAI	YACGTR	2 cut(s)	131, 776
BstC8I	GCNNGC	1 cut(s)	378
BstDEI	CTNAG	8 cut(s)	160, 211, 253, 258, 263, 402, 866, 878
BstENI	CCTNNNNNAGG	2 cut(s)	159, 620
BstF5I	GGATG	4 cut(s)	31, 571, 967, 1048
BstFNI	CGCG	1 cut(s)	313
BstH2I	RGCGCY	4 cut(s)	321, 340, 1171, 1297
BstHHI	GCGC	4 cut(s)	320, 339, 1170, 1296
BstKTI	GATC	6 cut(s)	45, 429, 444, 552, 1227, 1363
BstMAI	GTCTC	3 cut(s)	163, 562, 962
BstMBI	GATC	6 cut(s)	42, 426, 441, 549, 1224, 1360
BstMWI	GCNNNNNNNGC	7 cut(s)	246, 343, 393, 803, 1072, 1174, 1183
BstNSI	RCATGY	1 cut(s)	826
BstSFI	CTRYAG	2 cut(s)	247, 801
BstSNI	TACGTA	1 cut(s)	131
BstUI	CGCG	1 cut(s)	313
BstV1I	GCAGC	5 cut(s)	261, 565, 784, 959, 1015
BstV2I	GAAGAC	1 cut(s)	1326
BstX2I	RGATCY	2 cut(s)	441, 549
BstXI	CCANNNNNNTGG	2 cut(s)	1038, 1178
BstYI	RGATCY	2 cut(s)	441, 549
BsuI	GTATCC	2 cut(s)	721, 1257
BsuRI	GGCC	1 cut(s)	495
BtrI	CACGTC	1 cut(s)	137
BtsCI	GGATG	4 cut(s)	31, 571, 967, 1048
BtsIMutI	CAGTG	2 cut(s)	529, 652
Cac8I	GCNNGC	1 cut(s)	378
CciI	TCATGA	1 cut(s)	423
CfoI	GCGC	4 cut(s)	320, 339, 1170, 1296
Cfr10I	RCCGGY	2 cut(s)	376, 506
Cfr13I	GGNCC	2 cut(s)	4, 361
CseI	GACGC	3 cut(s)	304, 319, 335
Csp6I	GTAC	4 cut(s)	128, 132, 559, 687
CspCI	CAANNNNNGTGG	4 cut(s)	1008, 1043, 1235, 1270
CviAII	CATG	5 cut(s)	424, 608, 823, 1079, 1178
CviQI	GTAC	4 cut(s)	128, 132, 559, 687
DdeI	CTNAG	8 cut(s)	160, 211, 253, 258, 263, 402, 866, 878
DinI	GGCGCC	2 cut(s)	1169, 1295
DpnI	GATC	6 cut(s)	44, 428, 443, 551, 1226, 1362
DpnII	GATC	6 cut(s)	42, 426, 441, 549, 1224, 1360
EaeI	YGGCCR	1 cut(s)	493
Eam1104I	CTCTTC	2 cut(s)	1253, 1305
EarI	CTCTTC	2 cut(s)	1253, 1305
EciI	GGCGGA	1 cut(s)	407
Eco105I	TACGTA	1 cut(s)	131
Eco130I	CCWWGG	1 cut(s)	1192
Eco47I	GGWCC	2 cut(s)	4, 361
Eco47III	AGCGCT	1 cut(s)	338
Eco57I	CTGAAG	2 cut(s)	350, 695
Eco72I	CACGTG	1 cut(s)	776
Eco88I	CYCGRG	1 cut(s)	85
EcoNI	CCTNNNNNAGG	2 cut(s)	159, 620
EcoO109I	RGGNCCY	1 cut(s)	361
EcoRI	GAATTC	1 cut(s)	1094
EcoT14I	CCWWGG	1 cut(s)	1192
EgeI	GGCGCC	2 cut(s)	1169, 1295
EheI	GGCGCC	2 cut(s)	1169, 1295
ErhI	CCWWGG	1 cut(s)	1192
FaeI	CATG	5 cut(s)	427, 611, 826, 1082, 1181
FalI	AAGNNNNNCTT	2 cut(s)	380, 412
FaqI	GGGAC	1 cut(s)	68
FatI	CATG	5 cut(s)	423, 607, 822, 1078, 1177
FauNDI	CATATG	1 cut(s)	934
FblI	GTMKAC	1 cut(s)	293
Fnu4HI	GCNGC	7 cut(s)	250, 483, 579, 798, 948, 1004, 1151
FokI	GGATG	4 cut(s)	18, 558, 974, 1055
Fsp4HI	GCNGC	7 cut(s)	250, 483, 579, 798, 948, 1004, 1151
FspBI	CTAG	2 cut(s)	36, 584
GlaI	GCGC	4 cut(s)	319, 338, 1169, 1295
GluI	GCNGC	7 cut(s)	250, 483, 579, 798, 948, 1004, 1151
GsuI	CTGGAG	2 cut(s)	323, 1349
HaeII	RGCGCY	4 cut(s)	321, 340, 1171, 1297
HaeIII	GGCC	1 cut(s)	495
HapII	CCGG	2 cut(s)	377, 507
HgaI	GACGC	3 cut(s)	304, 319, 335
HhaI	GCGC	4 cut(s)	320, 339, 1170, 1296
Hin1I	GRCGYC	2 cut(s)	1168, 1294
Hin1II	CATG	5 cut(s)	427, 611, 826, 1082, 1181
Hin6I	GCGC	4 cut(s)	318, 337, 1168, 1294
HinP1I	GCGC	4 cut(s)	318, 337, 1168, 1294
HincII	GTYRAC	1 cut(s)	294
HindII	GTYRAC	1 cut(s)	294
HindIII	AAGCTT	1 cut(s)	1073
HinfI	GANTC	2 cut(s)	223, 1117
HpaII	CCGG	2 cut(s)	377, 507
HphI	GGTGA	2 cut(s)	319, 1294
Hpy166II	GTNNAC	3 cut(s)	134, 294, 1285
Hpy188I	TCNGA	5 cut(s)	187, 351, 369, 405, 1122
Hpy188III	TCNNGA	7 cut(s)	85, 162, 227, 323, 424, 737, 1091
Hpy8I	GTNNAC	3 cut(s)	134, 294, 1285
Hpy99I	CGWCG	2 cut(s)	295, 298
HpyAV	CCTTC	4 cut(s)	193, 352, 374, 463
HpyCH4III	ACNGT	3 cut(s)	117, 413, 691
HpyCH4IV	ACGT	6 cut(s)	130, 136, 180, 700, 775, 955
HpyCH4V	TGCA	5 cut(s)	249, 527, 581, 704, 947
HpyF10VI	GCNNNNNNNGC	7 cut(s)	246, 343, 393, 803, 1072, 1174, 1183
HpyF3I	CTNAG	8 cut(s)	160, 211, 253, 258, 263, 402, 866, 878
HpySE526I	ACGT	6 cut(s)	130, 136, 180, 700, 775, 955
Hsp92I	GRCGYC	2 cut(s)	1168, 1294
Hsp92II	CATG	5 cut(s)	427, 611, 826, 1082, 1181
HspAI	GCGC	4 cut(s)	318, 337, 1168, 1294
KasI	GGCGCC	2 cut(s)	1167, 1293
KpnI	GGTACC	1 cut(s)	690
KroI	GCCGGC	1 cut(s)	376
KroNI	GCCGGC	1 cut(s)	378
Kzo9I	GATC	6 cut(s)	42, 426, 441, 549, 1224, 1360
LmnI	GCTCC	5 cut(s)	203, 334, 343, 628, 811
Lsp1109I	GCAGC	5 cut(s)	261, 565, 784, 959, 1015
LweI	GCATC	1 cut(s)	583
MaeI	CTAG	2 cut(s)	36, 584
MaeII	ACGT	6 cut(s)	130, 136, 180, 700, 775, 955
MaeIII	GTNAC	3 cut(s)	307, 771, 1124
MalI	GATC	6 cut(s)	44, 428, 443, 551, 1226, 1362
MbiI	CCGCTC	1 cut(s)	1150
MboI	GATC	6 cut(s)	42, 426, 441, 549, 1224, 1360
MboII	GAAGA	7 cut(s)	44, 289, 688, 1270, 1319, 1322, 1331
MfeI	CAATTG	1 cut(s)	1233
MflI	RGATCY	2 cut(s)	441, 549
MlsI	TGGCCA	1 cut(s)	495
MluI	ACGCGT	1 cut(s)	311
MluNI	TGGCCA	1 cut(s)	495
Mly113I	GGCGCC	2 cut(s)	1168, 1294
MlyI	GAGTC	1 cut(s)	232
MmeI	TCCRAC	1 cut(s)	726
Mox20I	TGGCCA	1 cut(s)	495
MroNI	GCCGGC	1 cut(s)	376
MscI	TGGCCA	1 cut(s)	495
MseI	TTAA	5 cut(s)	95, 827, 915, 1158, 1384
MslI	CAYNNNNRTG	2 cut(s)	515, 1176
Msp20I	TGGCCA	1 cut(s)	495
MspA1I	CMGCKG	1 cut(s)	578
MspI	CCGG	2 cut(s)	377, 507
MunI	CAATTG	1 cut(s)	1233
Mva1269I	GAATGC	2 cut(s)	527, 1188
MvnI	CGCG	1 cut(s)	313
MwoI	GCNNNNNNNGC	7 cut(s)	246, 343, 393, 803, 1072, 1174, 1183
NaeI	GCCGGC	1 cut(s)	378
NarI	GGCGCC	2 cut(s)	1168, 1294
NdeI	CATATG	1 cut(s)	934
NdeII	GATC	6 cut(s)	42, 426, 441, 549, 1224, 1360
NgoMIV	GCCGGC	1 cut(s)	376
NlaIII	CATG	5 cut(s)	427, 611, 826, 1082, 1181
NlaIV	GGNNCC	5 cut(s)	511, 630, 688, 1169, 1295
NmuCI	GTSAC	2 cut(s)	307, 771
NspI	RCATGY	1 cut(s)	826
OliI	CACNNNNGTG	1 cut(s)	515
PagI	TCATGA	1 cut(s)	423
PctI	GAATGC	2 cut(s)	527, 1188
PdiI	GCCGGC	1 cut(s)	378
PfeI	GAWTC	1 cut(s)	1117
PkrI	GCNGC	7 cut(s)	251, 484, 580, 799, 949, 1005, 1152
PleI	GAGTC	1 cut(s)	231
PluTI	GGCGCC	2 cut(s)	1171, 1297
PmaCI	CACGTG	1 cut(s)	776
PmlI	CACGTG	1 cut(s)	776
PpsI	GAGTC	1 cut(s)	231
Ppu21I	YACGTR	2 cut(s)	131, 776
PpuMI	RGGWCCY	1 cut(s)	361
PshBI	ATTAAT	1 cut(s)	95
PsiI	TTATAA	1 cut(s)	1014
Psp1406I	AACGTT	1 cut(s)	180
Psp5II	RGGWCCY	1 cut(s)	361
PspCI	CACGTG	1 cut(s)	776
PspN4I	GGNNCC	5 cut(s)	511, 630, 688, 1169, 1295
PspPI	GGNCC	2 cut(s)	4, 361
PspPPI	RGGWCCY	1 cut(s)	361
PstI	CTGCAG	1 cut(s)	251
PsuI	RGATCY	2 cut(s)	441, 549
PvuII	CAGCTG	1 cut(s)	578
RsaI	GTAC	4 cut(s)	129, 133, 560, 688
RsaNI	GTAC	4 cut(s)	128, 132, 559, 687
RseI	CAYNNNNRTG	2 cut(s)	515, 1176
SalI	GTCGAC	1 cut(s)	292
SaqAI	TTAA	5 cut(s)	95, 827, 915, 1158, 1384
SatI	GCNGC	7 cut(s)	250, 483, 579, 798, 948, 1004, 1151
Sau3AI	GATC	6 cut(s)	42, 426, 441, 549, 1224, 1360
Sau96I	GGNCC	2 cut(s)	4, 361
SchI	GAGTC	1 cut(s)	232
SfaNI	GCATC	1 cut(s)	583
SfcI	CTRYAG	2 cut(s)	247, 801
SfoI	GGCGCC	2 cut(s)	1169, 1295
SgrDI	CGTCGACG	1 cut(s)	292
SinI	GGWCC	2 cut(s)	4, 361
SmiMI	CAYNNNNRTG	2 cut(s)	515, 1176
SmlI	CTYRAG	2 cut(s)	620, 633
SmoI	CTYRAG	2 cut(s)	620, 633
SnaBI	TACGTA	1 cut(s)	131
SpeI	ACTAGT	1 cut(s)	583
SsiI	CCGC	3 cut(s)	418, 482, 1150
SspDI	GGCGCC	2 cut(s)	1167, 1293
SspMI	CTAG	2 cut(s)	36, 584
StyI	CCWWGG	1 cut(s)	1192
TaaI	ACNGT	3 cut(s)	117, 413, 691
TaiI	ACGT	6 cut(s)	133, 139, 183, 703, 778, 958
TaqI	TCGA	3 cut(s)	226, 293, 429
TauI	GCSGC	2 cut(s)	485, 1153
TfiI	GAWTC	1 cut(s)	1117
Tru1I	TTAA	5 cut(s)	95, 827, 915, 1158, 1384
Tru9I	TTAA	5 cut(s)	95, 827, 915, 1158, 1384
TscAI	CASTG	2 cut(s)	529, 652
TseFI	GTSAC	2 cut(s)	307, 771
TseI	GCWGC	5 cut(s)	249, 578, 797, 947, 1003
Tsp45I	GTSAC	2 cut(s)	307, 771
TspDTI	ATGAA	3 cut(s)	624, 1067, 1332
TspGWI	ACGGA	2 cut(s)	35, 542
TspRI	CASTG	2 cut(s)	529, 652
VpaK11BI	GGWCC	2 cut(s)	4, 361
VspI	ATTAAT	1 cut(s)	95
XagI	CCTNNNNNAGG	2 cut(s)	159, 620
XapI	RAATTY	1 cut(s)	1094
XceI	RCATGY	1 cut(s)	826
XmiI	GTMKAC	1 cut(s)	293
XspI	CTAG	2 cut(s)	36, 584

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.