Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0009331

Physical Location & Seq

Genomic Coordinates Forward (+)

5694037 .. 5698132

Gene Structure 4096 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g05370.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGTCGTCGACGCTACTGGAGGTGACGCGTGGCGCTCACAAGGAGGTGGAGCGGTTGGAGCGTCTGATAGTGATGGGCAGCAAGGAACGCTTGGCTCAGAGCCACCGGGTCCGTCACAGGATCGACACCATCTCCTCCACCGCACAAAGACTCGATAACGATAATGCCAGGAAGGACGAGATTGCGGCTCTCGGAGGCCAAACTGCCACCGGCACCAATGTGTTCAGTGCATTCTATGATCGATTGAAAGAGATCCGTGAGTACCTTAGGAGACATCCAGCTGCACTAGTTGTTGATGCTAATGAGGAGCATGAAGCACTGCTCAAGGAGGAGCCTCAAGTTGAGGTCAGCGGAGAGGAAGCCTATGGACGATACCTGGATTTACATGAACTGTACAATCAGTATACCAATTCTAAATTTAGAGAGCCCATTGAGTACTCTGCTTACCTTGATGTTTTTTCACAACCGCATAAGATTCCTCGGAAGCTCAAGTCTACAAGGCAGTACAGGGAATATATTGAGAATCTTGTTCAGTATCTGGTATATTTCTTCCACCGGACAGAGCCATTGCAAGATCTTGATAGAATATTTGCAAAGGTTGAAGCTGAATTTGAAGAACAATGGGCAGATGGTAAGGTAGAAGAATGGGAAACTGCAATTCTAGATAGTGAACATGTTCAAGATCAGCAGACTTTGATTAATCTTGACTACTTTAGCACAGTGGAAGAACTGGTGGAATTGGGTCCTGAAAAGCTAAAGGAGGCGTTGGATCGTCTCTTTATTATTCAAAGCTTAATTTCAGTTTCCATTGCTAATCTCTGTATTTTACCTTCTAGGTATTGGCTTCGATGGGGACTGAAAGTAGGTGGTACCATACAGCAACGTGCAGAGAGGCTTTTACTTACAAAGGACACACCTCTGGAAAAGTTGGACAAGAAGCACTTTGTCAAAGGGTCACGTGGTTCAGCACAGAATGGGGCTGCTGTAGCTCCACAGCAAGTTGGCATTGCTTGTTTACAAATTATCTGCTGCATTGTGCAAGCTATTGAACGAACAAAAGACAACATTGTCAAGAAACAGGCTTTGCCATATGAAGAAATTGCAGCAGAACGTGAGGATGAAGAGACACAGGCTGATACTGAAAGTGATGACGATGAACAGCAGATTTATAATCCACTCAAATTGCCAATGGGTTGGGATGGGAAGCCCATACCTTACTGGCTGTATAATCTTCATGGTCTTGGTCAGGAAAGTGTGAGATATGTGGGAATCAGAGTTACTGGGGGCGTAGAGCTTTTGAGCGGCATTTTAAGGAATGGCGCCATCAGCATGGAATGCGTTGCCTTGGAAGCACAAGAATTGTGGAAGAGGATACAAGCATGGCAAGGGGTGAACAAGTGGCGCCCAGAGAAGAGTATGAAGACAGAGAGGGAAACAGCTATAATAAGAAGACATACTGATCTGCAGCGACAGGGACTAATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005737 GO:0005829 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0022607 GO:0022613 GO:0022618 GO:0031974 GO:0031981 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043900 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045694 GO:0046483 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0065003 GO:0065007 GO:0070013 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990904 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DUF3449 SF3A3 SF3a60_bindingd Telomere_Sde2_2

Protein Analysis

495

Amino Acids

56.99

Weight (kDa)

5.52

Isoelectric Point (pI)

39.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SF3a60_bindingd	PF12108	68 - 93	5.3e-09	Splicing factor SF3a60 binding domain
SF3A3	PF16837	117 - 163	1.1e-16	Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9
SDE2_2C	PF13297	212 - 259	5.8e-07	Replication stress response SDE2 C-terminal
SDE2_2C	PF13297	284 - 317	4.1e-11	Replication stress response SDE2 C-terminal
SF3a60_Prp9_C	PF11931	394 - 417	4.8e-07	SF3a60/Prp9 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009331)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06160
fragaria_vesca	FvH4_1g22860 FvH4_5g28470 FvH4_7g05370 FvH4_7g06390
malus_domestica	MD01G1219700.v1.1 MD07G1290300.v1.1
prunus_persica	Prupe.2G311500_v2.0.a1
pyrus_communis	pycom01g22950 pycom07g26290
rosa_chinensis	RchiOBHm_Chr1g0331941
rosa_laevigata	RLG00000025855 RLG00000029702
rosa_multiflora	Rmu_sc0004874.1_g000018 Rmu_sc0008128.1_g000009
rosa_roxburghii	Rroxscaffold_4G00318600
rosa_rugosa	Rorug01G0097000
rosa_samantha	Rh1AG121100 Rh1BG092700 Rh1CG115900 Rh1DG127000
rosa_wichuraiana	Rw1G009880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1170
AasI	GACNNNNNNGTC	1 cut(s)	1067
Acc65I	GGTACC	1 cut(s)	869
AccB1I	GGYRCC	4 cut(s)	212, 869, 1319, 1401
AccBSI	CCGCTC	2 cut(s)	52, 1302
AccI	GTMKAC	3 cut(s)	8, 404, 494
AccII	CGCG	1 cut(s)	28
AciI	CCGC	6 cut(s)	52, 141, 185, 351, 467, 1302
AclWI	GGATC	3 cut(s)	128, 247, 777
AcsI	RAATTY	2 cut(s)	416, 608
AcvI	CACGTG	1 cut(s)	959
AcyI	GRCGYC	2 cut(s)	1320, 1402
AfaI	GTAC	5 cut(s)	263, 395, 437, 506, 871
AflIII	ACRYGT	2 cut(s)	26, 673
AgsI	TTSAA	6 cut(s)	247, 602, 614, 680, 788, 1049
AhlI	ACTAGT	1 cut(s)	286
AjnI	CCWGG	2 cut(s)	167, 375
AleI	CACNNNNGTG	1 cut(s)	218
AluBI	AGCT	9 cut(s)	281, 487, 605, 754, 792, 989, 1043, 1294, 1439
AluI	AGCT	9 cut(s)	281, 487, 605, 754, 792, 989, 1043, 1294, 1439
Alw26I	GTCTC	3 cut(s)	265, 779, 1118
AlwI	GGATC	3 cut(s)	128, 247, 777
AlwNI	CAGNNNCTG	1 cut(s)	538
AoxI	GGCC	1 cut(s)	196
ApeKI	GCWGC	6 cut(s)	78, 281, 980, 1029, 1103, 1465
ApoI	RAATTY	2 cut(s)	416, 608
AseI	ATTAAT	1 cut(s)	699
Asp700I	GAANNNNTTC	1 cut(s)	675
Asp718I	GGTACC	1 cut(s)	869
AspLEI	GCGC	3 cut(s)	35, 1322, 1404
AspS9I	GGNCC	2 cut(s)	109, 743
AsuC2I	CCSGG	1 cut(s)	107
AsuHPI	GGTGA	2 cut(s)	34, 1402
AvaII	GGWCC	2 cut(s)	109, 743
AxyI	CCTNAGG	1 cut(s)	266
BanI	GGYRCC	4 cut(s)	212, 869, 1319, 1401
BanII	GRGCYC	1 cut(s)	429
BarI	GAAGNNNNNNTAC	2 cut(s)	814, 846
BbrPI	CACGTG	1 cut(s)	959
BbsI	GAAGAC	2 cut(s)	1427, 1456
BbvI	GCAGC	6 cut(s)	90, 268, 967, 1016, 1115, 1477
BccI	CCATC	6 cut(s)	67, 137, 623, 843, 1193, 1331
BciT130I	CCWGG	2 cut(s)	169, 377
BciVI	GTATCC	1 cut(s)	1365
BcnI	CCSGG	1 cut(s)	107
BcoDI	GTCTC	3 cut(s)	265, 779, 1118
BcuI	ACTAGT	1 cut(s)	286
BfaI	CTAG	3 cut(s)	287, 662, 834
BfmI	CTRYAG	2 cut(s)	984, 1463
BfoI	RGCGCY	3 cut(s)	36, 1323, 1405
BfuI	GTATCC	1 cut(s)	1365
BglII	AGATCT	1 cut(s)	574
BisI	GCNGC	8 cut(s)	79, 186, 282, 981, 1030, 1104, 1303, 1466
BlsI	GCNGC	8 cut(s)	80, 187, 283, 982, 1031, 1105, 1304, 1467
BmcAI	AGTACT	1 cut(s)	437
Bme1390I	CCNGG	3 cut(s)	107, 169, 377
Bme18I	GGWCC	2 cut(s)	109, 743
BmgT120I	GGNCC	2 cut(s)	109, 743
BmiI	GGNNCC	7 cut(s)	110, 214, 333, 744, 871, 1321, 1403
BmrFI	CCNGG	3 cut(s)	107, 169, 377
BmrI	ACTGGG	1 cut(s)	1290
BmsI	GCATC	1 cut(s)	286
BmuI	ACTGGG	1 cut(s)	1290
BpiI	GAAGAC	2 cut(s)	1427, 1456
BpmI	CTGGAG	1 cut(s)	38
BpuEI	CTTGAG	3 cut(s)	308, 321, 473
BpuMI	CCSGG	1 cut(s)	107
Bsa29I	ATCGAT	1 cut(s)	241
BsaAI	YACGTR	1 cut(s)	959
BsaHI	GRCGYC	2 cut(s)	1320, 1402
BsaJI	CCNNGG	2 cut(s)	479, 1344
BsaWI	WCCGGW	1 cut(s)	555
BsaXI	ACNNNNNCTCC	2 cut(s)	116, 146
Bse118I	RCCGGY	1 cut(s)	209
Bse1I	ACTGG	4 cut(s)	21, 735, 1223, 1285
Bse21I	CCTNAGG	1 cut(s)	266
Bse3DI	GCAATG	3 cut(s)	566, 807, 1005
BseBI	CCWGG	2 cut(s)	169, 377
BseCI	ATCGAT	1 cut(s)	241
BseDI	CCNNGG	2 cut(s)	479, 1344
BseGI	GGATG	3 cut(s)	274, 1123, 1204
BseMI	GCAATG	3 cut(s)	566, 807, 1005
BseMII	CTCAG	1 cut(s)	110
BseNI	ACTGG	4 cut(s)	21, 735, 1223, 1285
BseRI	GAGGAG	3 cut(s)	124, 320, 344
BseXI	GCAGC	6 cut(s)	90, 268, 967, 1016, 1115, 1477
BsgI	GTGCAG	2 cut(s)	267, 906
Bsh1236I	CGCG	1 cut(s)	28
BshFI	GGCC	1 cut(s)	198
BshNI	GGYRCC	4 cut(s)	212, 869, 1319, 1401
BshVI	ATCGAT	1 cut(s)	241
BsiSI	CCGG	3 cut(s)	106, 210, 556
BslFI	GGGAC	1 cut(s)	867
BsmAI	GTCTC	3 cut(s)	265, 779, 1118
BsmBI	CGTCTC	1 cut(s)	779
BsmFI	GGGAC	1 cut(s)	867
BsmI	GAATGC	2 cut(s)	230, 1340
BsnI	GGCC	1 cut(s)	198
Bsp1286I	GDGCHC	1 cut(s)	429
Bsp1407I	TGTACA	1 cut(s)	393
Bsp143I	GATC	7 cut(s)	120, 238, 252, 574, 682, 769, 1459
BspACI	CCGC	6 cut(s)	52, 141, 185, 351, 467, 1302
BspANI	GGCC	1 cut(s)	198
BspCNI	CTCAG	1 cut(s)	109
BspDI	ATCGAT	1 cut(s)	241
BspFNI	CGCG	1 cut(s)	28
BspLI	GGNNCC	7 cut(s)	110, 214, 333, 744, 871, 1321, 1403
BspMAI	CTGCAG	1 cut(s)	1467
BspPI	GGATC	3 cut(s)	128, 247, 777
BspT107I	GGYRCC	4 cut(s)	212, 869, 1319, 1401
BsrBI	CCGCTC	2 cut(s)	52, 1302
BsrDI	GCAATG	3 cut(s)	566, 807, 1005
BsrFI	RCCGGY	1 cut(s)	209
BsrGI	TGTACA	1 cut(s)	393
BsrI	ACTGG	4 cut(s)	21, 735, 1223, 1285
BssAI	RCCGGY	1 cut(s)	209
BssECI	CCNNGG	2 cut(s)	479, 1344
BssMI	GATC	7 cut(s)	120, 238, 252, 574, 682, 769, 1459
BssNAI	GTATAC	1 cut(s)	405
BssNI	GRCGYC	2 cut(s)	1320, 1402
BssT1I	CCWWGG	1 cut(s)	1344
Bst1107I	GTATAC	1 cut(s)	405
Bst2UI	CCWGG	2 cut(s)	169, 377
Bst4CI	ACNGT	2 cut(s)	393, 721
Bst6I	CTCTTC	3 cut(s)	1116, 1361, 1406
BstACI	GRCGYC	2 cut(s)	1320, 1402
BstAPI	GCANNNNNTGC	1 cut(s)	1335
BstAUI	TGTACA	1 cut(s)	393
BstBAI	YACGTR	1 cut(s)	959
BstC8I	GCNNGC	1 cut(s)	1041
BstDEI	CTNAG	2 cut(s)	96, 266
BstF5I	GGATG	3 cut(s)	274, 1123, 1204
BstFNI	CGCG	1 cut(s)	28
BstH2I	RGCGCY	3 cut(s)	36, 1323, 1405
BstHHI	GCGC	3 cut(s)	35, 1322, 1404
BstKTI	GATC	7 cut(s)	123, 241, 255, 577, 685, 772, 1462
BstMAI	GTCTC	3 cut(s)	265, 779, 1118
BstMBI	GATC	7 cut(s)	120, 238, 252, 574, 682, 769, 1459
BstMWI	GCNNNNNNNGC	6 cut(s)	58, 87, 986, 1326, 1335, 1349
BstNI	CCWGG	2 cut(s)	169, 377
BstNSI	RCATGY	1 cut(s)	677
BstSCI	CCNGG	3 cut(s)	105, 167, 375
BstSFI	CTRYAG	2 cut(s)	984, 1463
BstUI	CGCG	1 cut(s)	28
BstV1I	GCAGC	6 cut(s)	90, 268, 967, 1016, 1115, 1477
BstV2I	GAAGAC	2 cut(s)	1427, 1456
BstX2I	RGATCY	2 cut(s)	252, 574
BstXI	CCANNNNNNTGG	2 cut(s)	1194, 1330
BstYI	RGATCY	2 cut(s)	252, 574
BstZ17I	GTATAC	1 cut(s)	405
Bsu15I	ATCGAT	1 cut(s)	241
Bsu36I	CCTNAGG	1 cut(s)	266
BsuI	GTATCC	1 cut(s)	1365
BsuRI	GGCC	1 cut(s)	198
BsuTUI	ATCGAT	1 cut(s)	241
BtsCI	GGATG	3 cut(s)	274, 1123, 1204
BtsI	GCAGTG	1 cut(s)	317
BtsIMutI	CAGTG	3 cut(s)	232, 317, 726
Cac8I	GCNNGC	1 cut(s)	1041
CaiI	CAGNNNCTG	1 cut(s)	538
CfoI	GCGC	3 cut(s)	35, 1322, 1404
Cfr10I	RCCGGY	1 cut(s)	209
Cfr13I	GGNCC	2 cut(s)	109, 743
ClaI	ATCGAT	1 cut(s)	241
CseI	GACGC	3 cut(s)	19, 34, 50
Csp6I	GTAC	5 cut(s)	262, 394, 436, 505, 870
CspCI	CAANNNNNGTGG	4 cut(s)	1164, 1199, 1343, 1378
CviAII	CATG	6 cut(s)	311, 386, 674, 1235, 1330, 1380
CviQI	GTAC	5 cut(s)	262, 394, 436, 505, 870
DdeI	CTNAG	2 cut(s)	96, 266
DinI	GGCGCC	2 cut(s)	1321, 1403
DpnI	GATC	7 cut(s)	122, 240, 254, 576, 684, 771, 1461
DpnII	GATC	7 cut(s)	120, 238, 252, 574, 682, 769, 1459
DrdI	GACNNNNNNGTC	1 cut(s)	1067
DseDI	GACNNNNNNGTC	1 cut(s)	1067
Eam1104I	CTCTTC	3 cut(s)	1116, 1361, 1406
EarI	CTCTTC	3 cut(s)	1116, 1361, 1406
Eco130I	CCWWGG	1 cut(s)	1344
Eco24I	GRGCYC	1 cut(s)	429
Eco47I	GGWCC	2 cut(s)	109, 743
Eco72I	CACGTG	1 cut(s)	959
Eco81I	CCTNAGG	1 cut(s)	266
EcoO109I	RGGNCCY	1 cut(s)	743
EcoRII	CCWGG	2 cut(s)	167, 375
EcoT14I	CCWWGG	1 cut(s)	1344
EcoT38I	GRGCYC	1 cut(s)	429
EgeI	GGCGCC	2 cut(s)	1321, 1403
EheI	GGCGCC	2 cut(s)	1321, 1403
ErhI	CCWWGG	1 cut(s)	1344
Esp3I	CGTCTC	1 cut(s)	779
FaeI	CATG	6 cut(s)	314, 389, 677, 1238, 1333, 1383
FalI	AAGNNNNNCTT	4 cut(s)	74, 106, 926, 958
FaqI	GGGAC	1 cut(s)	867
FatI	CATG	6 cut(s)	310, 385, 673, 1234, 1329, 1379
FauNDI	CATATG	1 cut(s)	1090
FblI	GTMKAC	3 cut(s)	8, 404, 494
Fnu4HI	GCNGC	8 cut(s)	79, 186, 282, 981, 1030, 1104, 1303, 1466
FokI	GGATG	3 cut(s)	261, 1130, 1211
FriOI	GRGCYC	1 cut(s)	429
Fsp4HI	GCNGC	8 cut(s)	79, 186, 282, 981, 1030, 1104, 1303, 1466
FspBI	CTAG	3 cut(s)	287, 662, 834
GlaI	GCGC	3 cut(s)	34, 1321, 1403
GluI	GCNGC	8 cut(s)	79, 186, 282, 981, 1030, 1104, 1303, 1466
GsuI	CTGGAG	1 cut(s)	38
HaeII	RGCGCY	3 cut(s)	36, 1323, 1405
HaeIII	GGCC	1 cut(s)	198
HapII	CCGG	3 cut(s)	106, 210, 556
HgaI	GACGC	3 cut(s)	19, 34, 50
HhaI	GCGC	3 cut(s)	35, 1322, 1404
Hin1I	GRCGYC	2 cut(s)	1320, 1402
Hin1II	CATG	6 cut(s)	314, 389, 677, 1238, 1333, 1383
Hin6I	GCGC	3 cut(s)	33, 1320, 1402
HinP1I	GCGC	3 cut(s)	33, 1320, 1402
HincII	GTYRAC	1 cut(s)	9
HindII	GTYRAC	1 cut(s)	9
HindIII	AAGCTT	1 cut(s)	790
HinfI	GANTC	4 cut(s)	150, 475, 523, 1269
HpaII	CCGG	3 cut(s)	106, 210, 556
HphI	GGTGA	2 cut(s)	34, 1402
Hpy166II	GTNNAC	6 cut(s)	9, 405, 495, 671, 1016, 1393
Hpy188I	TCNGA	5 cut(s)	66, 99, 194, 483, 1274
Hpy188III	TCNNGA	8 cut(s)	578, 662, 680, 704, 746, 920, 1072, 1247
Hpy8I	GTNNAC	6 cut(s)	9, 405, 495, 671, 1016, 1393
Hpy99I	CGWCG	2 cut(s)	10, 13
HpyAV	CCTTC	2 cut(s)	166, 840
HpyCH4III	ACNGT	2 cut(s)	393, 721
HpyCH4IV	ACGT	3 cut(s)	883, 958, 1111
HpyF10VI	GCNNNNNNNGC	6 cut(s)	58, 87, 986, 1326, 1335, 1349
HpyF3I	CTNAG	2 cut(s)	96, 266
HpySE526I	ACGT	3 cut(s)	883, 958, 1111
Hsp92I	GRCGYC	2 cut(s)	1320, 1402
Hsp92II	CATG	6 cut(s)	314, 389, 677, 1238, 1333, 1383
HspAI	GCGC	3 cut(s)	33, 1320, 1402
KasI	GGCGCC	2 cut(s)	1319, 1401
KpnI	GGTACC	1 cut(s)	873
Kzo9I	GATC	7 cut(s)	120, 238, 252, 574, 682, 769, 1459
LmnI	GCTCC	5 cut(s)	49, 58, 307, 331, 994
Lsp1109I	GCAGC	6 cut(s)	90, 268, 967, 1016, 1115, 1477
LweI	GCATC	1 cut(s)	286
MaeI	CTAG	3 cut(s)	287, 662, 834
MaeII	ACGT	3 cut(s)	883, 958, 1111
MaeIII	GTNAC	4 cut(s)	22, 113, 954, 1276
MalI	GATC	7 cut(s)	122, 240, 254, 576, 684, 771, 1461
MbiI	CCGCTC	2 cut(s)	52, 1302
MboI	GATC	7 cut(s)	120, 238, 252, 574, 682, 769, 1459
MflI	RGATCY	2 cut(s)	252, 574
MhlI	GDGCHC	1 cut(s)	429
MluI	ACGCGT	1 cut(s)	26
Mly113I	GGCGCC	2 cut(s)	1320, 1402
MlyI	GAGTC	1 cut(s)	144
MmeI	TCCRAC	3 cut(s)	36, 747, 909
MroXI	GAANNNNTTC	1 cut(s)	675
MseI	TTAA	3 cut(s)	699, 794, 1310
MslI	CAYNNNNRTG	2 cut(s)	218, 1328
MspA1I	CMGCKG	2 cut(s)	281, 351
MspI	CCGG	3 cut(s)	106, 210, 556
MspR9I	CCNGG	3 cut(s)	107, 169, 377
Mva1269I	GAATGC	2 cut(s)	230, 1340
MvaI	CCWGG	2 cut(s)	169, 377
MvnI	CGCG	1 cut(s)	28
MwoI	GCNNNNNNNGC	6 cut(s)	58, 87, 986, 1326, 1335, 1349
NarI	GGCGCC	2 cut(s)	1320, 1402
NciI	CCSGG	1 cut(s)	107
NdeI	CATATG	1 cut(s)	1090
NdeII	GATC	7 cut(s)	120, 238, 252, 574, 682, 769, 1459
NlaIII	CATG	6 cut(s)	314, 389, 677, 1238, 1333, 1383
NlaIV	GGNNCC	7 cut(s)	110, 214, 333, 744, 871, 1321, 1403
NmuCI	GTSAC	3 cut(s)	22, 113, 954
NspI	RCATGY	1 cut(s)	677
OliI	CACNNNNGTG	1 cut(s)	218
PciI	ACATGT	1 cut(s)	673
PctI	GAATGC	2 cut(s)	230, 1340
PdmI	GAANNNNTTC	1 cut(s)	675
PfeI	GAWTC	3 cut(s)	475, 523, 1269
PkrI	GCNGC	8 cut(s)	80, 187, 283, 982, 1031, 1105, 1304, 1467
PleI	GAGTC	1 cut(s)	144
PluTI	GGCGCC	2 cut(s)	1323, 1405
PmaCI	CACGTG	1 cut(s)	959
PmlI	CACGTG	1 cut(s)	959
PpsI	GAGTC	1 cut(s)	144
Ppu21I	YACGTR	1 cut(s)	959
PpuMI	RGGWCCY	1 cut(s)	743
PscI	ACATGT	1 cut(s)	673
PshBI	ATTAAT	1 cut(s)	699
PsiI	TTATAA	1 cut(s)	1170
Psp5II	RGGWCCY	1 cut(s)	743
Psp6I	CCWGG	2 cut(s)	167, 375
PspCI	CACGTG	1 cut(s)	959
PspGI	CCWGG	2 cut(s)	167, 375
PspN4I	GGNNCC	7 cut(s)	110, 214, 333, 744, 871, 1321, 1403
PspPI	GGNCC	2 cut(s)	109, 743
PspPPI	RGGWCCY	1 cut(s)	743
PstI	CTGCAG	1 cut(s)	1467
PstNI	CAGNNNCTG	1 cut(s)	538
PsuI	RGATCY	2 cut(s)	252, 574
PvuII	CAGCTG	1 cut(s)	281
RsaI	GTAC	5 cut(s)	263, 395, 437, 506, 871
RsaNI	GTAC	5 cut(s)	262, 394, 436, 505, 870
RseI	CAYNNNNRTG	2 cut(s)	218, 1328
SalI	GTCGAC	1 cut(s)	7
SaqAI	TTAA	3 cut(s)	699, 794, 1310
SatI	GCNGC	8 cut(s)	79, 186, 282, 981, 1030, 1104, 1303, 1466
Sau3AI	GATC	7 cut(s)	120, 238, 252, 574, 682, 769, 1459
Sau96I	GGNCC	2 cut(s)	109, 743
ScaI	AGTACT	1 cut(s)	437
SchI	GAGTC	1 cut(s)	144
ScrFI	CCNGG	3 cut(s)	107, 169, 377
SduI	GDGCHC	1 cut(s)	429
SfaNI	GCATC	1 cut(s)	286
SfcI	CTRYAG	2 cut(s)	984, 1463
SfoI	GGCGCC	2 cut(s)	1321, 1403
SgrDI	CGTCGACG	1 cut(s)	7
SinI	GGWCC	2 cut(s)	109, 743
SmiMI	CAYNNNNRTG	2 cut(s)	218, 1328
SmlI	CTYRAG	3 cut(s)	323, 336, 488
SmoI	CTYRAG	3 cut(s)	323, 336, 488
SpeI	ACTAGT	1 cut(s)	286
SsiI	CCGC	6 cut(s)	52, 141, 185, 351, 467, 1302
SspDI	GGCGCC	2 cut(s)	1319, 1401
SspI	AATATT	1 cut(s)	588
SspMI	CTAG	3 cut(s)	287, 662, 834
StyD4I	CCNGG	3 cut(s)	105, 167, 375
StyI	CCWWGG	1 cut(s)	1344
TaaI	ACNGT	2 cut(s)	393, 721
TaiI	ACGT	3 cut(s)	886, 961, 1114
TaqI	TCGA	5 cut(s)	8, 123, 153, 241, 847
TatI	WGTACW	3 cut(s)	393, 435, 504
TauI	GCSGC	2 cut(s)	188, 1305
TfiI	GAWTC	3 cut(s)	475, 523, 1269
Tru1I	TTAA	3 cut(s)	699, 794, 1310
Tru9I	TTAA	3 cut(s)	699, 794, 1310
TscAI	CASTG	3 cut(s)	232, 324, 726
TseFI	GTSAC	3 cut(s)	22, 113, 954
TseI	GCWGC	6 cut(s)	78, 281, 980, 1029, 1103, 1465
Tsp45I	GTSAC	3 cut(s)	22, 113, 954
TspDTI	ATGAA	7 cut(s)	327, 402, 1107, 1134, 1170, 1223, 1433
TspGWI	ACGGA	2 cut(s)	101, 245
TspRI	CASTG	3 cut(s)	232, 324, 726
VpaK11BI	GGWCC	2 cut(s)	109, 743
VspI	ATTAAT	1 cut(s)	699
XapI	RAATTY	2 cut(s)	416, 608
XbaI	TCTAGA	1 cut(s)	661
XceI	RCATGY	1 cut(s)	677
XmiI	GTMKAC	3 cut(s)	8, 404, 494
XmnI	GAANNNNTTC	1 cut(s)	675
XspI	CTAG	3 cut(s)	287, 662, 834
ZrmI	AGTACT	1 cut(s)	437

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.