No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G11690 AT5G06380 |
| fragaria_vesca | FvH4_6g20920 |
| malus_domestica | MD12G1045100.v1.1 MD14G1044000.v1.1 |
| prunus_persica | Prupe.7G090300_v2.0.a1 |
| pyrus_communis | pycom14g03730 |
| rosa_chinensis | RchiOBHm_Chr3g0477261 |
| rosa_laevigata | RLG00000023732 |
| rosa_multiflora | Rmu_co8078510.1_g000001 Rmu_sc0000348.1_g000009 |
| rosa_roxburghii | Rroxscaffold_6G00404280 Rroxscaffold_6G00404760 |
| rosa_rugosa | Rorug03G0159400 |
| rosa_samantha | Rh3AG209700 Rh3BG243400 |
| rosa_wichuraiana | Rw0G000260 Rw0G021730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 159, 202 |
| AccII | CGCG | 1 cut(s) | 189 |
| AciI | CCGC | 5 cut(s) | 54, 81, 184, 187, 196 |
| AclWI | GGATC | 1 cut(s) | 67 |
| AcyI | GRCGYC | 1 cut(s) | 419 |
| AfaI | GTAC | 2 cut(s) | 88, 150 |
| AluBI | AGCT | 2 cut(s) | 166, 410 |
| AluI | AGCT | 2 cut(s) | 166, 410 |
| Alw26I | GTCTC | 3 cut(s) | 23, 48, 429 |
| AlwI | GGATC | 1 cut(s) | 67 |
| ApeKI | GCWGC | 1 cut(s) | 104 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 400 |
| AspLEI | GCGC | 2 cut(s) | 122, 191 |
| AsuHPI | GGTGA | 1 cut(s) | 278 |
| BauI | CACGAG | 1 cut(s) | 171 |
| BbvI | GCAGC | 1 cut(s) | 116 |
| BceAI | ACGGC | 5 cut(s) | 25, 84, 108, 183, 432 |
| BcoDI | GTCTC | 3 cut(s) | 23, 48, 429 |
| BisI | GCNGC | 3 cut(s) | 105, 184, 187 |
| BlsI | GCNGC | 3 cut(s) | 106, 185, 188 |
| BpuEI | CTTGAG | 1 cut(s) | 390 |
| BsaHI | GRCGYC | 1 cut(s) | 419 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 33 |
| BseMII | CTCAG | 1 cut(s) | 63 |
| BseRI | GAGGAG | 1 cut(s) | 276 |
| BseXI | GCAGC | 1 cut(s) | 116 |
| BsgI | GTGCAG | 1 cut(s) | 123 |
| Bsh1236I | CGCG | 1 cut(s) | 189 |
| BsmAI | GTCTC | 3 cut(s) | 23, 48, 429 |
| BsmBI | CGTCTC | 2 cut(s) | 48, 429 |
| Bsp143I | GATC | 1 cut(s) | 59 |
| BspACI | CCGC | 5 cut(s) | 54, 81, 184, 187, 196 |
| BspCNI | CTCAG | 1 cut(s) | 64 |
| BspFNI | CGCG | 1 cut(s) | 189 |
| BspPI | GGATC | 1 cut(s) | 67 |
| BssMI | GATC | 1 cut(s) | 59 |
| BssNAI | GTATAC | 2 cut(s) | 160, 203 |
| BssNI | GRCGYC | 1 cut(s) | 419 |
| BssSI | CACGAG | 1 cut(s) | 171 |
| Bst1107I | GTATAC | 2 cut(s) | 160, 203 |
| Bst2BI | CACGAG | 1 cut(s) | 171 |
| Bst4CI | ACNGT | 1 cut(s) | 380 |
| Bst6I | CTCTTC | 1 cut(s) | 241 |
| BstACI | GRCGYC | 1 cut(s) | 419 |
| BstDEI | CTNAG | 1 cut(s) | 72 |
| BstFNI | CGCG | 1 cut(s) | 189 |
| BstHHI | GCGC | 2 cut(s) | 122, 191 |
| BstKTI | GATC | 1 cut(s) | 62 |
| BstMAI | GTCTC | 3 cut(s) | 23, 48, 429 |
| BstMBI | GATC | 1 cut(s) | 59 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 101, 195, 344, 416 |
| BstUI | CGCG | 1 cut(s) | 189 |
| BstV1I | GCAGC | 1 cut(s) | 116 |
| BstX2I | RGATCY | 1 cut(s) | 59 |
| BstYI | RGATCY | 1 cut(s) | 59 |
| BstZ17I | GTATAC | 2 cut(s) | 160, 203 |
| BtsIMutI | CAGTG | 1 cut(s) | 385 |
| CfoI | GCGC | 2 cut(s) | 122, 191 |
| CseI | GACGC | 2 cut(s) | 121, 408 |
| Csp6I | GTAC | 2 cut(s) | 87, 149 |
| CviJI | RGCY | 6 cut(s) | 71, 107, 166, 338, 399, 410 |
| CviKI_1 | RGCY | 6 cut(s) | 71, 107, 166, 338, 399, 410 |
| CviQI | GTAC | 2 cut(s) | 87, 149 |
| DdeI | CTNAG | 1 cut(s) | 72 |
| DpnI | GATC | 1 cut(s) | 61 |
| DpnII | GATC | 1 cut(s) | 59 |
| Eam1104I | CTCTTC | 1 cut(s) | 241 |
| EarI | CTCTTC | 1 cut(s) | 241 |
| EciI | GGCGGA | 2 cut(s) | 69, 185 |
| Esp3I | CGTCTC | 2 cut(s) | 48, 429 |
| FaiI | YATR | 5 cut(s) | 49, 112, 118, 160, 203 |
| FblI | GTMKAC | 2 cut(s) | 159, 202 |
| Fnu4HI | GCNGC | 3 cut(s) | 105, 184, 187 |
| Fsp4HI | GCNGC | 3 cut(s) | 105, 184, 187 |
| GlaI | GCGC | 2 cut(s) | 121, 190 |
| GluI | GCNGC | 3 cut(s) | 105, 184, 187 |
| HgaI | GACGC | 2 cut(s) | 121, 408 |
| HhaI | GCGC | 2 cut(s) | 122, 191 |
| Hin1I | GRCGYC | 1 cut(s) | 419 |
| Hin6I | GCGC | 2 cut(s) | 120, 189 |
| HinP1I | GCGC | 2 cut(s) | 120, 189 |
| HinfI | GANTC | 3 cut(s) | 16, 139, 177 |
| HphI | GGTGA | 1 cut(s) | 278 |
| Hpy166II | GTNNAC | 4 cut(s) | 160, 176, 203, 286 |
| Hpy188III | TCNNGA | 1 cut(s) | 136 |
| Hpy8I | GTNNAC | 4 cut(s) | 160, 176, 203, 286 |
| Hpy99I | CGWCG | 7 cut(s) | 27, 70, 94, 137, 149, 210, 424 |
| HpyAV | CCTTC | 1 cut(s) | 349 |
| HpyCH4III | ACNGT | 1 cut(s) | 380 |
| HpyCH4V | TGCA | 1 cut(s) | 104 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 101, 195, 344, 416 |
| HpyF3I | CTNAG | 1 cut(s) | 72 |
| Hsp92I | GRCGYC | 1 cut(s) | 419 |
| HspAI | GCGC | 2 cut(s) | 120, 189 |
| Kzo9I | GATC | 1 cut(s) | 59 |
| LmnI | GCTCC | 3 cut(s) | 127, 171, 366 |
| LpnPI | CCDG | 1 cut(s) | 376 |
| Lsp1109I | GCAGC | 1 cut(s) | 116 |
| MalI | GATC | 1 cut(s) | 61 |
| MboI | GATC | 1 cut(s) | 59 |
| MboII | GAAGA | 8 cut(s) | 258, 323, 326, 329, 332, 335, 338, 341 |
| MflI | RGATCY | 1 cut(s) | 59 |
| MluCI | AATT | 2 cut(s) | 275, 436 |
| MlyI | GAGTC | 2 cut(s) | 25, 171 |
| MmeI | TCCRAC | 1 cut(s) | 330 |
| MnlI | CCTC | 6 cut(s) | 50, 180, 254, 257, 301, 328 |
| MroXI | GAANNNNTTC | 1 cut(s) | 400 |
| MvnI | CGCG | 1 cut(s) | 189 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 101, 195, 344, 416 |
| NdeII | GATC | 1 cut(s) | 59 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 141, 211 |
| PdmI | GAANNNNTTC | 1 cut(s) | 400 |
| PfeI | GAWTC | 1 cut(s) | 139 |
| PkrI | GCNGC | 3 cut(s) | 106, 185, 188 |
| PleI | GAGTC | 2 cut(s) | 24, 171 |
| PpsI | GAGTC | 2 cut(s) | 24, 171 |
| PsuI | RGATCY | 1 cut(s) | 59 |
| RsaI | GTAC | 2 cut(s) | 88, 150 |
| RsaNI | GTAC | 2 cut(s) | 87, 149 |
| SatI | GCNGC | 3 cut(s) | 105, 184, 187 |
| Sau3AI | GATC | 1 cut(s) | 59 |
| SchI | GAGTC | 2 cut(s) | 25, 171 |
| SetI | ASST | 2 cut(s) | 168, 412 |
| SmlI | CTYRAG | 1 cut(s) | 405 |
| SmoI | CTYRAG | 1 cut(s) | 405 |
| Sse9I | AATT | 2 cut(s) | 275, 436 |
| SsiI | CCGC | 5 cut(s) | 54, 81, 184, 187, 196 |
| TaaI | ACNGT | 1 cut(s) | 380 |
| TaqI | TCGA | 1 cut(s) | 25 |
| TasI | AATT | 2 cut(s) | 275, 436 |
| TauI | GCSGC | 2 cut(s) | 186, 189 |
| TfiI | GAWTC | 1 cut(s) | 139 |
| TscAI | CASTG | 1 cut(s) | 385 |
| TseI | GCWGC | 1 cut(s) | 104 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 2 cut(s) | 11, 223 |
| TspRI | CASTG | 1 cut(s) | 385 |
| XmiI | GTMKAC | 2 cut(s) | 159, 202 |
| XmnI | GAANNNNTTC | 1 cut(s) | 400 |