sorting nexin
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G07120 AT5G07120 AT5G07120 AT5G58440 |
| fragaria_vesca | FvH4_3g39770 |
| malus_domestica | MD03G1056600.v1.1 MD11G1058400.v1.1 |
| prunus_persica | Prupe.6G048200_v2.0.a1 |
| pyrus_communis | pycom11g04840 |
| rosa_chinensis | RchiOBHm_Chr5g0071651 |
| rosa_laevigata | RLG00000036238 |
| rosa_multiflora | Rmu_sc0002060.1_g000020 Rmu_sc0005745.1_g000035 Rmu_sc0006567.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00009520 |
| rosa_rugosa | Rorug05G0414000 |
| rosa_samantha | Rh5BG489500 Rh5CG513300 Rh5DG500300 |
| rosa_wichuraiana | Rw5G043660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1334 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1668 |
| AccII | CGCG | 3 cut(s) | 75, 166, 308 |
| AciI | CCGC | 6 cut(s) | 73, 267, 308, 800, 879, 1449 |
| AclWI | GGATC | 4 cut(s) | 80, 197, 553, 991 |
| AcsI | RAATTY | 4 cut(s) | 469, 1160, 1219, 1267 |
| AcuI | CTGAAG | 3 cut(s) | 304, 1215, 1527 |
| AcyI | GRCGYC | 1 cut(s) | 1335 |
| AfaI | GTAC | 2 cut(s) | 493, 1538 |
| AfeI | AGCGCT | 1 cut(s) | 142 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 266, 917, 1096, 1321, 1668 |
| AgsI | TTSAA | 7 cut(s) | 474, 769, 782, 1186, 1267, 1574, 1609 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 25 |
| AjnI | CCWGG | 2 cut(s) | 481, 1329 |
| AleI | CACNNNNGTG | 1 cut(s) | 818 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 235, 267 |
| Alw21I | GWGCWC | 4 cut(s) | 416, 815, 1201, 1715 |
| Alw26I | GTCTC | 2 cut(s) | 570, 1112 |
| AlwI | GGATC | 4 cut(s) | 80, 197, 553, 991 |
| Ama87I | CYCGRG | 1 cut(s) | 290 |
| Aor51HI | AGCGCT | 1 cut(s) | 142 |
| AoxI | GGCC | 3 cut(s) | 462, 638, 1312 |
| ApeKI | GCWGC | 2 cut(s) | 138, 853 |
| ApoI | RAATTY | 4 cut(s) | 469, 1160, 1219, 1267 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 90, 122, 1164, 1196 |
| AseI | ATTAAT | 1 cut(s) | 1065 |
| AspLEI | GCGC | 4 cut(s) | 143, 217, 787, 1337 |
| AsuC2I | CCSGG | 1 cut(s) | 912 |
| AsuHPI | GGTGA | 3 cut(s) | 161, 884, 1463 |
| AvaI | CYCGRG | 1 cut(s) | 290 |
| BanI | GGYRCC | 1 cut(s) | 1334 |
| BanII | GRGCYC | 4 cut(s) | 11, 416, 1201, 1715 |
| BauI | CACGAG | 2 cut(s) | 1091, 1200 |
| BbsI | GAAGAC | 3 cut(s) | 396, 1174, 1515 |
| Bbv12I | GWGCWC | 4 cut(s) | 416, 815, 1201, 1715 |
| BbvCI | CCTCAGC | 1 cut(s) | 1683 |
| BbvI | GCAGC | 2 cut(s) | 150, 840 |
| BccI | CCATC | 8 cut(s) | 39, 49, 74, 356, 833, 1315, 1502, 1535 |
| BceAI | ACGGC | 2 cut(s) | 127, 280 |
| BciT130I | CCWGG | 2 cut(s) | 483, 1331 |
| BclI | TGATCA | 1 cut(s) | 747 |
| BcnI | CCSGG | 1 cut(s) | 912 |
| BcoDI | GTCTC | 2 cut(s) | 570, 1112 |
| BfaI | CTAG | 5 cut(s) | 393, 519, 828, 1353, 1421 |
| BfmI | CTRYAG | 1 cut(s) | 229 |
| BfoI | RGCGCY | 2 cut(s) | 144, 1338 |
| BglII | AGATCT | 2 cut(s) | 395, 1349 |
| BisI | GCNGC | 3 cut(s) | 139, 268, 854 |
| BlsI | GCNGC | 3 cut(s) | 140, 269, 855 |
| BmcAI | AGTACT | 1 cut(s) | 493 |
| Bme1390I | CCNGG | 3 cut(s) | 483, 912, 1331 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 25 |
| BmeT110I | CYCGRG | 1 cut(s) | 290 |
| BmiI | GGNNCC | 1 cut(s) | 1336 |
| BmrFI | CCNGG | 3 cut(s) | 483, 912, 1331 |
| BmrI | ACTGGG | 1 cut(s) | 985 |
| BmsI | GCATC | 2 cut(s) | 660, 1439 |
| BmuI | ACTGGG | 1 cut(s) | 985 |
| BoxI | GACNNNNGTC | 1 cut(s) | 165 |
| BpiI | GAAGAC | 3 cut(s) | 396, 1174, 1515 |
| BpmI | CTGGAG | 3 cut(s) | 174, 504, 1582 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1683 |
| BpuEI | CTTGAG | 1 cut(s) | 1070 |
| BpuMI | CCSGG | 1 cut(s) | 912 |
| BsaBI | GATNNNNATC | 2 cut(s) | 84, 201 |
| BsaHI | GRCGYC | 1 cut(s) | 1335 |
| BsaJI | CCNNGG | 3 cut(s) | 635, 1309, 1330 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 54, 84, 235, 265, 1025, 1055 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 266, 917, 1096, 1321, 1668 |
| Bse1I | ACTGG | 3 cut(s) | 980, 1404, 1565 |
| Bse3DI | GCAATG | 1 cut(s) | 109 |
| Bse8I | GATNNNNATC | 2 cut(s) | 84, 201 |
| BseBI | CCWGG | 2 cut(s) | 483, 1331 |
| BseDI | CCNNGG | 3 cut(s) | 635, 1309, 1330 |
| BseGI | GGATG | 5 cut(s) | 41, 316, 739, 837, 844 |
| BseJI | GATNNNNATC | 2 cut(s) | 84, 201 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 266, 917, 1096, 1321, 1668 |
| BseMI | GCAATG | 1 cut(s) | 109 |
| BseMII | CTCAG | 6 cut(s) | 24, 369, 461, 597, 926, 1674 |
| BseNI | ACTGG | 3 cut(s) | 980, 1404, 1565 |
| BseRI | GAGGAG | 2 cut(s) | 577, 933 |
| BseXI | GCAGC | 2 cut(s) | 150, 840 |
| BsgI | GTGCAG | 2 cut(s) | 1391, 1617 |
| Bsh1236I | CGCG | 3 cut(s) | 75, 166, 308 |
| BshFI | GGCC | 3 cut(s) | 464, 640, 1314 |
| BshNI | GGYRCC | 1 cut(s) | 1334 |
| BsiHKAI | GWGCWC | 4 cut(s) | 416, 815, 1201, 1715 |
| BsiHKCI | CYCGRG | 1 cut(s) | 290 |
| BsiSI | CCGG | 1 cut(s) | 911 |
| BslFI | GGGAC | 1 cut(s) | 13 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 266, 917, 1096, 1321, 1668 |
| BsmAI | GTCTC | 2 cut(s) | 570, 1112 |
| BsmFI | GGGAC | 1 cut(s) | 13 |
| BsmI | GAATGC | 2 cut(s) | 627, 1142 |
| BsnI | GGCC | 3 cut(s) | 464, 640, 1314 |
| BsoBI | CYCGRG | 1 cut(s) | 290 |
| Bsp1286I | GDGCHC | 5 cut(s) | 11, 416, 815, 1201, 1715 |
| BspACI | CCGC | 6 cut(s) | 73, 267, 308, 800, 879, 1449 |
| BspANI | GGCC | 3 cut(s) | 464, 640, 1314 |
| BspCNI | CTCAG | 6 cut(s) | 23, 368, 460, 598, 927, 1675 |
| BspFNI | CGCG | 3 cut(s) | 75, 166, 308 |
| BspLI | GGNNCC | 1 cut(s) | 1336 |
| BspPI | GGATC | 4 cut(s) | 80, 197, 553, 991 |
| BspT107I | GGYRCC | 1 cut(s) | 1334 |
| BsrDI | GCAATG | 1 cut(s) | 109 |
| BsrI | ACTGG | 3 cut(s) | 980, 1404, 1565 |
| BssECI | CCNNGG | 3 cut(s) | 635, 1309, 1330 |
| BssNI | GRCGYC | 1 cut(s) | 1335 |
| BssSI | CACGAG | 2 cut(s) | 1091, 1200 |
| BssT1I | CCWWGG | 1 cut(s) | 1309 |
| Bst2BI | CACGAG | 2 cut(s) | 1091, 1200 |
| Bst2UI | CCWGG | 2 cut(s) | 483, 1331 |
| Bst4CI | ACNGT | 8 cut(s) | 222, 436, 542, 758, 864, 960, 1279, 1369 |
| Bst6I | CTCTTC | 5 cut(s) | 18, 45, 161, 694, 1473 |
| BstACI | GRCGYC | 1 cut(s) | 1335 |
| BstC8I | GCNNGC | 4 cut(s) | 804, 1080, 1246, 1596 |
| BstDEI | CTNAG | 7 cut(s) | 10, 355, 447, 606, 935, 953, 1683 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1094 |
| BstF5I | GGATG | 5 cut(s) | 41, 316, 739, 837, 844 |
| BstFNI | CGCG | 3 cut(s) | 75, 166, 308 |
| BstH2I | RGCGCY | 2 cut(s) | 144, 1338 |
| BstHHI | GCGC | 4 cut(s) | 143, 217, 787, 1337 |
| BstMAI | GTCTC | 2 cut(s) | 570, 1112 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 81, 1232, 1241 |
| BstNI | CCWGG | 2 cut(s) | 483, 1331 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 165 |
| BstSCI | CCNGG | 3 cut(s) | 481, 910, 1329 |
| BstSFI | CTRYAG | 1 cut(s) | 229 |
| BstUI | CGCG | 3 cut(s) | 75, 166, 308 |
| BstV1I | GCAGC | 2 cut(s) | 150, 840 |
| BstV2I | GAAGAC | 3 cut(s) | 396, 1174, 1515 |
| BstX2I | RGATCY | 2 cut(s) | 395, 1349 |
| BstYI | RGATCY | 2 cut(s) | 395, 1349 |
| BsuRI | GGCC | 3 cut(s) | 464, 640, 1314 |
| BtsCI | GGATG | 5 cut(s) | 41, 316, 739, 837, 844 |
| BtsIMutI | CAGTG | 5 cut(s) | 432, 763, 1374, 1397, 1503 |
| Cac8I | GCNNGC | 4 cut(s) | 804, 1080, 1246, 1596 |
| CfoI | GCGC | 4 cut(s) | 143, 217, 787, 1337 |
| CseI | GACGC | 2 cut(s) | 155, 1384 |
| Csp6I | GTAC | 2 cut(s) | 492, 1537 |
| CviAII | CATG | 1 cut(s) | 1111 |
| CviQI | GTAC | 2 cut(s) | 492, 1537 |
| DdeI | CTNAG | 7 cut(s) | 10, 355, 447, 606, 935, 953, 1683 |
| DinI | GGCGCC | 1 cut(s) | 1336 |
| DraI | TTTAAA | 1 cut(s) | 946 |
| DriI | GACNNNNNGTC | 1 cut(s) | 25 |
| Eam1104I | CTCTTC | 5 cut(s) | 18, 45, 161, 694, 1473 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 25 |
| EarI | CTCTTC | 5 cut(s) | 18, 45, 161, 694, 1473 |
| Ecl136II | GAGCTC | 3 cut(s) | 414, 1199, 1713 |
| Eco130I | CCWWGG | 1 cut(s) | 1309 |
| Eco24I | GRGCYC | 4 cut(s) | 11, 416, 1201, 1715 |
| Eco32I | GATATC | 1 cut(s) | 337 |
| Eco47III | AGCGCT | 1 cut(s) | 142 |
| Eco53kI | GAGCTC | 3 cut(s) | 414, 1199, 1713 |
| Eco57I | CTGAAG | 3 cut(s) | 304, 1215, 1527 |
| Eco88I | CYCGRG | 1 cut(s) | 290 |
| EcoICRI | GAGCTC | 3 cut(s) | 414, 1199, 1713 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1094 |
| EcoRI | GAATTC | 1 cut(s) | 1267 |
| EcoRII | CCWGG | 2 cut(s) | 481, 1329 |
| EcoRV | GATATC | 1 cut(s) | 337 |
| EcoT14I | CCWWGG | 1 cut(s) | 1309 |
| EcoT38I | GRGCYC | 4 cut(s) | 11, 416, 1201, 1715 |
| EgeI | GGCGCC | 1 cut(s) | 1336 |
| EheI | GGCGCC | 1 cut(s) | 1336 |
| ErhI | CCWWGG | 1 cut(s) | 1309 |
| FaeI | CATG | 1 cut(s) | 1114 |
| FaqI | GGGAC | 1 cut(s) | 13 |
| FatI | CATG | 1 cut(s) | 1110 |
| FbaI | TGATCA | 1 cut(s) | 747 |
| Fnu4HI | GCNGC | 3 cut(s) | 139, 268, 854 |
| FokI | GGATG | 5 cut(s) | 28, 323, 726, 844, 851 |
| FriOI | GRGCYC | 4 cut(s) | 11, 416, 1201, 1715 |
| Fsp4HI | GCNGC | 3 cut(s) | 139, 268, 854 |
| FspBI | CTAG | 5 cut(s) | 393, 519, 828, 1353, 1421 |
| GlaI | GCGC | 4 cut(s) | 142, 216, 786, 1336 |
| GluI | GCNGC | 3 cut(s) | 139, 268, 854 |
| GsuI | CTGGAG | 3 cut(s) | 174, 504, 1582 |
| HaeII | RGCGCY | 2 cut(s) | 144, 1338 |
| HaeIII | GGCC | 3 cut(s) | 464, 640, 1314 |
| HapII | CCGG | 1 cut(s) | 911 |
| HgaI | GACGC | 2 cut(s) | 155, 1384 |
| HhaI | GCGC | 4 cut(s) | 143, 217, 787, 1337 |
| Hin1I | GRCGYC | 1 cut(s) | 1335 |
| Hin1II | CATG | 1 cut(s) | 1114 |
| Hin6I | GCGC | 4 cut(s) | 141, 215, 785, 1335 |
| HinP1I | GCGC | 4 cut(s) | 141, 215, 785, 1335 |
| HincII | GTYRAC | 2 cut(s) | 109, 150 |
| HindII | GTYRAC | 2 cut(s) | 109, 150 |
| HpaII | CCGG | 1 cut(s) | 911 |
| HphI | GGTGA | 3 cut(s) | 161, 884, 1463 |
| Hpy166II | GTNNAC | 3 cut(s) | 109, 150, 1671 |
| Hpy188III | TCNNGA | 7 cut(s) | 393, 427, 751, 1049, 1093, 1165, 1606 |
| Hpy8I | GTNNAC | 3 cut(s) | 109, 150, 1671 |
| Hpy99I | CGWCG | 1 cut(s) | 178 |
| HpyAV | CCTTC | 4 cut(s) | 763, 869, 1024, 1090 |
| HpyCH4III | ACNGT | 8 cut(s) | 222, 436, 542, 758, 864, 960, 1279, 1369 |
| HpyCH4V | TGCA | 9 cut(s) | 627, 673, 707, 737, 1343, 1372, 1430, 1598, 1649 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 81, 1232, 1241 |
| HpyF3I | CTNAG | 7 cut(s) | 10, 355, 447, 606, 935, 953, 1683 |
| Hsp92I | GRCGYC | 1 cut(s) | 1335 |
| Hsp92II | CATG | 1 cut(s) | 1114 |
| HspAI | GCGC | 4 cut(s) | 141, 215, 785, 1335 |
| KasI | GGCGCC | 1 cut(s) | 1334 |
| Ksp22I | TGATCA | 1 cut(s) | 747 |
| LmnI | GCTCC | 2 cut(s) | 691, 884 |
| Lsp1109I | GCAGC | 2 cut(s) | 150, 840 |
| LweI | GCATC | 2 cut(s) | 660, 1439 |
| MaeI | CTAG | 5 cut(s) | 393, 519, 828, 1353, 1421 |
| MaeIII | GTNAC | 6 cut(s) | 167, 184, 583, 795, 1451, 1501 |
| MflI | RGATCY | 2 cut(s) | 395, 1349 |
| MhlI | GDGCHC | 5 cut(s) | 11, 416, 815, 1201, 1715 |
| MluCI | AATT | 8 cut(s) | 130, 469, 764, 1130, 1160, 1186, 1219, 1267 |
| Mly113I | GGCGCC | 1 cut(s) | 1335 |
| MlyI | GAGTC | 7 cut(s) | 35, 155, 253, 285, 617, 670, 1505 |
| MmeI | TCCRAC | 3 cut(s) | 147, 816, 1621 |
| MseI | TTAA | 6 cut(s) | 945, 1065, 1149, 1467, 1484, 1717 |
| MslI | CAYNNNNRTG | 1 cut(s) | 818 |
| MspA1I | CMGCKG | 2 cut(s) | 194, 1235 |
| MspI | CCGG | 1 cut(s) | 911 |
| MspR9I | CCNGG | 3 cut(s) | 483, 912, 1331 |
| Mva1269I | GAATGC | 2 cut(s) | 627, 1142 |
| MvaI | CCWGG | 2 cut(s) | 483, 1331 |
| MvnI | CGCG | 3 cut(s) | 75, 166, 308 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 81, 1232, 1241 |
| NarI | GGCGCC | 1 cut(s) | 1335 |
| NciI | CCSGG | 1 cut(s) | 912 |
| NlaIII | CATG | 1 cut(s) | 1114 |
| NlaIV | GGNNCC | 1 cut(s) | 1336 |
| NmuCI | GTSAC | 3 cut(s) | 167, 1451, 1501 |
| OliI | CACNNNNGTG | 1 cut(s) | 818 |
| PaeR7I | CTCGAG | 1 cut(s) | 290 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 170, 247 |
| PctI | GAATGC | 2 cut(s) | 627, 1142 |
| PfeI | GAWTC | 7 cut(s) | 197, 236, 383, 478, 526, 570, 1085 |
| PflFI | GACNNNGTC | 1 cut(s) | 275 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1668 |
| PfoI | TCCNGGA | 1 cut(s) | 481 |
| PkrI | GCNGC | 3 cut(s) | 140, 269, 855 |
| PleI | GAGTC | 7 cut(s) | 34, 155, 252, 284, 616, 669, 1505 |
| PluTI | GGCGCC | 1 cut(s) | 1338 |
| PpsI | GAGTC | 7 cut(s) | 34, 155, 252, 284, 616, 669, 1505 |
| PshAI | GACNNNNGTC | 1 cut(s) | 165 |
| PshBI | ATTAAT | 1 cut(s) | 1065 |
| Psp124BI | GAGCTC | 3 cut(s) | 416, 1201, 1715 |
| Psp6I | CCWGG | 2 cut(s) | 481, 1329 |
| PspGI | CCWGG | 2 cut(s) | 481, 1329 |
| PspN4I | GGNNCC | 1 cut(s) | 1336 |
| PspXI | VCTCGAGB | 1 cut(s) | 290 |
| PsuI | RGATCY | 2 cut(s) | 395, 1349 |
| PsyI | GACNNNGTC | 1 cut(s) | 275 |
| PvuII | CAGCTG | 2 cut(s) | 194, 1235 |
| RsaI | GTAC | 2 cut(s) | 493, 1538 |
| RsaNI | GTAC | 2 cut(s) | 492, 1537 |
| RseI | CAYNNNNRTG | 1 cut(s) | 818 |
| SacI | GAGCTC | 3 cut(s) | 416, 1201, 1715 |
| SaqAI | TTAA | 6 cut(s) | 945, 1065, 1149, 1467, 1484, 1717 |
| SatI | GCNGC | 3 cut(s) | 139, 268, 854 |
| ScaI | AGTACT | 1 cut(s) | 493 |
| SchI | GAGTC | 7 cut(s) | 35, 155, 253, 285, 617, 670, 1505 |
| ScrFI | CCNGG | 3 cut(s) | 483, 912, 1331 |
| SduI | GDGCHC | 5 cut(s) | 11, 416, 815, 1201, 1715 |
| SfaNI | GCATC | 2 cut(s) | 660, 1439 |
| SfcI | CTRYAG | 1 cut(s) | 229 |
| SfoI | GGCGCC | 1 cut(s) | 1336 |
| Sfr274I | CTCGAG | 1 cut(s) | 290 |
| SlaI | CTCGAG | 1 cut(s) | 290 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 818 |
| SmlI | CTYRAG | 2 cut(s) | 290, 1049 |
| SmoI | CTYRAG | 2 cut(s) | 290, 1049 |
| Sse9I | AATT | 8 cut(s) | 130, 469, 764, 1130, 1160, 1186, 1219, 1267 |
| SsiI | CCGC | 6 cut(s) | 73, 267, 308, 800, 879, 1449 |
| SspDI | GGCGCC | 1 cut(s) | 1334 |
| SspMI | CTAG | 5 cut(s) | 393, 519, 828, 1353, 1421 |
| SstI | GAGCTC | 3 cut(s) | 416, 1201, 1715 |
| StyD4I | CCNGG | 3 cut(s) | 481, 910, 1329 |
| StyI | CCWWGG | 1 cut(s) | 1309 |
| TaaI | ACNGT | 8 cut(s) | 222, 436, 542, 758, 864, 960, 1279, 1369 |
| TaqI | TCGA | 5 cut(s) | 159, 176, 291, 330, 1164 |
| TasI | AATT | 8 cut(s) | 130, 469, 764, 1130, 1160, 1186, 1219, 1267 |
| TatI | WGTACW | 1 cut(s) | 491 |
| TauI | GCSGC | 1 cut(s) | 270 |
| TfiI | GAWTC | 7 cut(s) | 197, 236, 383, 478, 526, 570, 1085 |
| Tru1I | TTAA | 6 cut(s) | 945, 1065, 1149, 1467, 1484, 1717 |
| Tru9I | TTAA | 6 cut(s) | 945, 1065, 1149, 1467, 1484, 1717 |
| TscAI | CASTG | 5 cut(s) | 439, 763, 1374, 1404, 1510 |
| TseFI | GTSAC | 3 cut(s) | 167, 1451, 1501 |
| TseI | GCWGC | 2 cut(s) | 138, 853 |
| Tsp45I | GTSAC | 3 cut(s) | 167, 1451, 1501 |
| TspDTI | ATGAA | 5 cut(s) | 375, 777, 1135, 1229, 1631 |
| TspGWI | ACGGA | 2 cut(s) | 288, 390 |
| TspRI | CASTG | 5 cut(s) | 439, 763, 1374, 1404, 1510 |
| Tth111I | GACNNNGTC | 1 cut(s) | 275 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1668 |
| VspI | ATTAAT | 1 cut(s) | 1065 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1094 |
| XapI | RAATTY | 4 cut(s) | 469, 1160, 1219, 1267 |
| XbaI | TCTAGA | 1 cut(s) | 392 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 52, 1307 |
| XhoI | CTCGAG | 1 cut(s) | 290 |
| XspI | CTAG | 5 cut(s) | 393, 519, 828, 1353, 1421 |
| ZrmI | AGTACT | 1 cut(s) | 493 |