Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0010972

Physical Location & Seq

Genomic Coordinates Forward (+)

77895075 .. 77899679

Gene Structure 4605 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000036238

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGGTTGGTGCCGCCATGGTTCGTGCGGCGCTGGACCGTGGAGGCGCGGGATTGAGGCGGTGCAGATTGGGGTGGGGAGATGGGTCGGCTTGGACGGCGCACGTCGTTACTGATTTTGATTTTCGAGCTGGTGGTATAACCATGATGGGCTCTGAGAACCACCAGGACCACCAATACGGTGGTTCGAAAGAAGAGATGGAGAGTCTCGTCCTCGGCGACCCGCCGCCGTTGAATAACGGCGGCGCCAGTAAGTCGTCGTATTCGAATTACCGCAGCGCCATGTCGTCGCTCTCCGACACGCACCACCCGCTCTCGTCTATAATCGTCTCCACGACCCCGGCCCCGGCCGATTCCGATCCGCTTCTGACTGCGCCACTGCCGTTCCGCGATCTCCGAAACCCTAACGGCGCCGACAGCTCCGCGTACGTCGACCCGCCCTCTTACGGCGACGTGGTTTTCAGTCCGTTGGATGGCGAGACGATCGGCGAAATCAACGGCGTCGAGAGTCCGAGCAAGAGCTCCGACCATTCCAGCTCTCATTCGCTTTCGCGATCTTCGTCTTCCAGCTCCGACTATATCAAAATCACGGTTTCGAATCCTCAGAAGGAACAGGAGTCCACGAATTCGGTTATTCCCGGAGGGAATACTTACGTCACGTATCTGATCACGACGAGGACGAACATTCCGGAGTTCGGCGGATCGGAATTCGGAGTCCGGCGGCGGTTTCGTGACATTGTGACGTTATCGGACCGGCTGGCCGAGGCGTACAGAGGGTTCTTCATTCCGCCGCGGCCGGATAAGAACGTGGTGGAGAGCCAGGTGATGCAGAAACAAGAGTTTGTGGAGCAGAGAAGAGTGGCATTGGAGAAGTACTTGAGGCGGTTAGCGGCTCACCCTGTGATCAAGAAGAGTGATGAGTTGAAGGTGTTTCTGCAAGTTCAGGGGAGGTTTCCGTTGCCGATGACCACCGACATGGCGTCGAGAATGCTGGATGGGGCTGCTAAGCTGCCGAAGCAGTTGTTCGGCGAGAGTTCCCCGGTGGCTCCACACGAGGTGGTTCAGCCAGCGAAAGGCGGCAGGGACTTGCTGAGGTTGTTCAAGGAGCTGAAGCAGTCTGTGGCCAATGATTGGGGAGGTTCGAAACCGCTGGTGGGGGAGGAAGATAAGGAGTTTATGGAAAAAAAAGACCACATGCAGGAGCTCGAGCAACAACTCAGCAATGCATCTCAGCAGGCTGAATCACTTGTAAAAGCTCAACAAGACATGGGAGAGACTATGGGAGAGTTAGGACTAGCATTTATAAAACTGACCAAATTTGAGAATGAGGAGGCCTTGTTCAACTCTCAAAGAATACGTGCTGCTGACATGAAGAATGTAGCAACTGCTGCTGTAAAAGCCAGCAGATACTATCGAGAATTGAATTCTCAGACTGTCAAACATTTGGACACATTCCATGAGTATCTTGGGCTAATGTTATCTGTCAAAGGTGCATTCTCGGATCGATCAAGTGCTTTATTGACTGTTCAGACTCTTCTATCAGAATTGGGTTCATTGCAGTCAAGGGCTGAAAAACTTGAAGTTGCATCGAACAAAATTTTTGGTGGTGACAAATCAAGGACTCGCAAACTGGAGGAGTTAAATGATACCATAAGAGCTACTGAGGATGCTAAGAATATAGCAATCAGAGAATATGAGAGAATCAAGGAGAACAACAGAAGTGAACTTGAGAGGCTTGACAGCGAGAGGCATGCTGACTTCTTGAACATGTTGAAGGGGTTTGTTCATAATCAGGTGGGATATGCCGAGAAAATAGCAAATGTGTGGTCCAAGGTTGCTGAGGAGACCAGTTCGTATGCACGAGAGAGCTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0005794 GO:0005802 GO:0005829 GO:0006807 GO:0006810 GO:0006897 GO:0006996 GO:0007034 GO:0007275 GO:0008150 GO:0008152 GO:0008289 GO:0009791 GO:0009987 GO:0010008 GO:0010467 GO:0012505 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0019538 GO:0019898 GO:0030904 GO:0031090 GO:0031410 GO:0031902 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032585 GO:0032588 GO:0032991 GO:0035091 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043621 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045324 GO:0046907 GO:0046982 GO:0046983 GO:0048856 GO:0051179 GO:0051234 GO:0051604 GO:0051641 GO:0051649 GO:0071704 GO:0071840 GO:0090351 GO:0097708 GO:0098588 GO:0098657 GO:0098791 GO:0098796 GO:0098805 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

PX Vps5

Protein Analysis

624

Amino Acids

68.92

Weight (kDa)

6.04

Isoelectric Point (pI)

43.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PX	PF00787	230 - 313	4.3e-18	PX domain
Vps5	PF09325	381 - 613	2.5e-21	Vps5 C terminal like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07120 AT5G07120 AT5G07120 AT5G58440
fragaria_vesca	FvH4_3g39770
malus_domestica	MD03G1056600.v1.1 MD11G1058400.v1.1
prunus_persica	Prupe.6G048200_v2.0.a1
pyrus_communis	pycom11g04840
rosa_chinensis	RchiOBHm_Chr5g0071651
rosa_laevigata	RLG00000036238
rosa_multiflora	Rmu_sc0002060.1_g000020 Rmu_sc0005745.1_g000035 Rmu_sc0006567.1_g000005
rosa_roxburghii	Rroxscaffold_1G00009520
rosa_rugosa	Rorug05G0414000
rosa_samantha	Rh5BG489500 Rh5CG513300 Rh5DG500300
rosa_wichuraiana	Rw5G043660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1301
AccB1I	GGYRCC	3 cut(s)	8, 242, 407
AccB7I	CCANNNNNTGG	1 cut(s)	1128
AccBSI	CCGCTC	1 cut(s)	310
AccI	GTMKAC	1 cut(s)	429
AccII	CGCG	5 cut(s)	47, 387, 422, 550, 790
AccIII	TCCGGA	1 cut(s)	685
AclWI	GGATC	3 cut(s)	350, 706, 1506
AcoI	YGGCCR	4 cut(s)	345, 756, 791, 1119
AcsI	RAATTY	5 cut(s)	622, 704, 1313, 1420, 1593
AcuI	CTGAAG	1 cut(s)	1127
AcyI	GRCGYC	4 cut(s)	243, 408, 498, 977
AdeI	CACNNNGTG	2 cut(s)	898, 1054
AfaI	GTAC	3 cut(s)	425, 767, 872
AfiI	CCNNNNNNNGG	8 cut(s)	343, 443, 470, 692, 1070, 1128, 1151, 1195
AflIII	ACRYGT	1 cut(s)	1764
AgsI	TTSAA	8 cut(s)	232, 922, 1099, 1339, 1420, 1577, 1762, 1771
AhdI	GACNNNNNGTC	1 cut(s)	976
AjiI	CACGTC	2 cut(s)	103, 451
AjnI	CCWGG	2 cut(s)	162, 816
AloI	GAACNNNNNNTCC	2 cut(s)	1319, 1351
Alw21I	GWGCWC	3 cut(s)	521, 1203, 1868
Alw26I	GTCTC	5 cut(s)	209, 331, 470, 1265, 1835
AlwI	GGATC	3 cut(s)	350, 706, 1506
Ama87I	CYCGRG	1 cut(s)	1202
Aor13HI	TCCGGA	1 cut(s)	685
AoxI	GGCC	6 cut(s)	339, 345, 756, 791, 1119, 1329
ApeKI	GCWGC	5 cut(s)	273, 998, 1006, 1358, 1385
ApoI	RAATTY	5 cut(s)	622, 704, 1313, 1420, 1593
ArsI	GACNNNNNNTTYG	2 cut(s)	1808, 1840
AspLEI	GCGC	7 cut(s)	31, 47, 100, 245, 278, 373, 410
AspS9I	GGNCC	5 cut(s)	34, 166, 340, 748, 1824
AsuC2I	CCSGG	4 cut(s)	338, 344, 636, 1037
AsuHPI	GGTGA	3 cut(s)	832, 884, 1616
AsuII	TTCGAA	4 cut(s)	185, 263, 593, 1139
AvaI	CYCGRG	1 cut(s)	1202
AvaII	GGWCC	4 cut(s)	34, 166, 748, 1824
BalI	TGGCCA	1 cut(s)	1121
BanI	GGYRCC	3 cut(s)	8, 242, 407
BanII	GRGCYC	4 cut(s)	152, 521, 1203, 1868
BauI	CACGAG	2 cut(s)	1049, 1857
BbsI	GAAGAC	1 cut(s)	552
Bbv12I	GWGCWC	3 cut(s)	521, 1203, 1868
BbvCI	CCTCAGC	2 cut(s)	1088, 1836
BbvI	GCAGC	5 cut(s)	285, 985, 993, 1345, 1372
BccI	CCATC	5 cut(s)	74, 139, 190, 464, 986
BceAI	ACGGC	7 cut(s)	111, 211, 253, 364, 421, 460, 511
BcgI	CGANNNNNNTGC	2 cut(s)	1730, 1764
BciT130I	CCWGG	2 cut(s)	164, 818
BclI	TGATCA	2 cut(s)	663, 900
BcnI	CCSGG	4 cut(s)	338, 344, 636, 1037
BcoDI	GTCTC	5 cut(s)	209, 331, 470, 1265, 1835
BfaI	CTAG	1 cut(s)	1292
BfoI	RGCGCY	4 cut(s)	32, 246, 279, 411
BlpI	GCTNAGC	1 cut(s)	1002
BmcAI	AGTACT	1 cut(s)	872
Bme1390I	CCNGG	6 cut(s)	164, 338, 344, 636, 818, 1037
Bme18I	GGWCC	4 cut(s)	34, 166, 748, 1824
BmeRI	GACNNNNNGTC	1 cut(s)	976
BmeT110I	CYCGRG	1 cut(s)	1202
BmgBI	CACGTC	2 cut(s)	103, 451
BmgT120I	GGNCC	5 cut(s)	34, 166, 340, 748, 1824
BmiI	GGNNCC	5 cut(s)	10, 244, 342, 409, 1044
BmrFI	CCNGG	6 cut(s)	164, 338, 344, 636, 818, 1037
BmsI	GCATC	4 cut(s)	813, 1232, 1592, 1654
BpiI	GAAGAC	1 cut(s)	552
BpmI	CTGGAG	1 cut(s)	1649
Bpu10I	CCTNAGC	2 cut(s)	1088, 1836
Bpu1102I	GCTNAGC	1 cut(s)	1002
Bpu14I	TTCGAA	4 cut(s)	185, 263, 593, 1139
BpuEI	CTTGAG	2 cut(s)	895, 1745
BpuMI	CCSGG	4 cut(s)	338, 344, 636, 1037
Bsa29I	ATCGAT	1 cut(s)	1501
BsaAI	YACGTR	2 cut(s)	657, 1355
BsaBI	GATNNNNATC	1 cut(s)	354
BsaHI	GRCGYC	4 cut(s)	243, 408, 498, 977
BsaI	GGTCTC	1 cut(s)	1835
BsaJI	CCNNGG	9 cut(s)	15, 37, 211, 336, 342, 759, 788, 1035, 1827
BsaWI	WCCGGW	1 cut(s)	685
BsaXI	ACNNNNNCTCC	2 cut(s)	1319, 1349
Bsc4I	CCNNNNNNNGG	8 cut(s)	343, 443, 470, 692, 1070, 1128, 1151, 1195
Bse118I	RCCGGY	1 cut(s)	750
Bse1I	ACTGG	3 cut(s)	246, 1632, 1845
Bse3DI	GCAATG	2 cut(s)	1225, 1550
Bse8I	GATNNNNATC	1 cut(s)	354
BseAI	TCCGGA	1 cut(s)	685
BseBI	CCWGG	2 cut(s)	164, 818
BseCI	ATCGAT	1 cut(s)	1501
BseDI	CCNNGG	9 cut(s)	15, 37, 211, 336, 342, 759, 788, 1035, 1827
BseGI	GGATG	3 cut(s)	475, 997, 1669
BseJI	GATNNNNATC	1 cut(s)	354
BseLI	CCNNNNNNNGG	8 cut(s)	343, 443, 470, 692, 1070, 1128, 1151, 1195
BseMI	GCAATG	2 cut(s)	1225, 1550
BseMII	CTCAG	8 cut(s)	144, 614, 1079, 1228, 1241, 1439, 1650, 1827
BseNI	ACTGG	3 cut(s)	246, 1632, 1845
BseRI	GAGGAG	3 cut(s)	1340, 1646, 1853
BseX3I	CGGCCG	2 cut(s)	345, 791
BseXI	GCAGC	5 cut(s)	285, 985, 993, 1345, 1372
BsgI	GTGCAG	1 cut(s)	82
Bsh1236I	CGCG	5 cut(s)	47, 387, 422, 550, 790
Bsh1285I	CGRYCG	3 cut(s)	348, 483, 794
BshFI	GGCC	6 cut(s)	341, 347, 758, 793, 1121, 1331
BshNI	GGYRCC	3 cut(s)	8, 242, 407
BshVI	ATCGAT	1 cut(s)	1501
BsiEI	CGRYCG	3 cut(s)	348, 483, 794
BsiHKAI	GWGCWC	3 cut(s)	521, 1203, 1868
BsiHKCI	CYCGRG	1 cut(s)	1202
BsiSI	CCGG	8 cut(s)	338, 344, 636, 686, 715, 751, 794, 1037
BsiWI	CGTACG	1 cut(s)	423
BslFI	GGGAC	1 cut(s)	1094
BslI	CCNNNNNNNGG	8 cut(s)	343, 443, 470, 692, 1070, 1128, 1151, 1195
BsmAI	GTCTC	5 cut(s)	209, 331, 470, 1265, 1835
BsmBI	CGTCTC	2 cut(s)	331, 470
BsmFI	GGGAC	1 cut(s)	1094
BsmI	GAATGC	2 cut(s)	990, 1490
BsnI	GGCC	6 cut(s)	341, 347, 758, 793, 1121, 1331
Bso31I	GGTCTC	1 cut(s)	1835
BsoBI	CYCGRG	1 cut(s)	1202
Bsp119I	TTCGAA	4 cut(s)	185, 263, 593, 1139
Bsp1286I	GDGCHC	4 cut(s)	152, 521, 1203, 1868
Bsp13I	TCCGGA	1 cut(s)	685
Bsp143I	GATC	9 cut(s)	355, 388, 480, 551, 663, 698, 900, 1498, 1502
Bsp1720I	GCTNAGC	1 cut(s)	1002
Bsp19I	CCATGG	1 cut(s)	15
Bsp68I	TCGCGA	1 cut(s)	550
BspANI	GGCC	6 cut(s)	341, 347, 758, 793, 1121, 1331
BspCNI	CTCAG	8 cut(s)	145, 613, 1080, 1227, 1240, 1438, 1651, 1828
BspDI	ATCGAT	1 cut(s)	1501
BspEI	TCCGGA	1 cut(s)	685
BspFNI	CGCG	5 cut(s)	47, 387, 422, 550, 790
BspLI	GGNNCC	5 cut(s)	10, 244, 342, 409, 1044
BspPI	GGATC	3 cut(s)	350, 706, 1506
BspT104I	TTCGAA	4 cut(s)	185, 263, 593, 1139
BspT107I	GGYRCC	3 cut(s)	8, 242, 407
BspTNI	GGTCTC	1 cut(s)	1835
BsrBI	CCGCTC	1 cut(s)	310
BsrDI	GCAATG	2 cut(s)	1225, 1550
BsrFI	RCCGGY	1 cut(s)	750
BsrI	ACTGG	3 cut(s)	246, 1632, 1845
BssAI	RCCGGY	1 cut(s)	750
BssECI	CCNNGG	9 cut(s)	15, 37, 211, 336, 342, 759, 788, 1035, 1827
BssMI	GATC	9 cut(s)	355, 388, 480, 551, 663, 698, 900, 1498, 1502
BssNI	GRCGYC	4 cut(s)	243, 408, 498, 977
BssSI	CACGAG	2 cut(s)	1049, 1857
BssT1I	CCWWGG	2 cut(s)	15, 1827
Bst2BI	CACGAG	2 cut(s)	1049, 1857
Bst2UI	CCWGG	2 cut(s)	164, 818
Bst4CI	ACNGT	5 cut(s)	38, 179, 589, 1432, 1522
Bst6I	CTCTTC	4 cut(s)	186, 847, 902, 1536
BstACI	GRCGYC	4 cut(s)	243, 408, 498, 977
BstAPI	GCANNNNNTGC	1 cut(s)	1385
BstBAI	YACGTR	2 cut(s)	657, 1355
BstBI	TTCGAA	4 cut(s)	185, 263, 593, 1139
BstC8I	GCNNGC	5 cut(s)	756, 1065, 1233, 1399, 1749
BstDSI	CCRYGG	3 cut(s)	15, 37, 788
BstF5I	GGATG	3 cut(s)	475, 997, 1669
BstFNI	CGCG	5 cut(s)	47, 387, 422, 550, 790
BstH2I	RGCGCY	4 cut(s)	32, 246, 279, 411
BstHHI	GCGC	7 cut(s)	31, 47, 100, 245, 278, 373, 410
BstKTI	GATC	9 cut(s)	358, 391, 483, 554, 666, 701, 903, 1501, 1505
BstMAI	GTCTC	5 cut(s)	209, 331, 470, 1265, 1835
BstMBI	GATC	9 cut(s)	355, 388, 480, 551, 663, 698, 900, 1498, 1502
BstMCI	CGRYCG	3 cut(s)	348, 483, 794
BstMWI	GCNNNNNNNGC	6 cut(s)	95, 307, 414, 1012, 1385, 1394
BstNI	CCWGG	2 cut(s)	164, 818
BstNSI	RCATGY	3 cut(s)	1195, 1751, 1768
BstSCI	CCNGG	6 cut(s)	162, 336, 342, 634, 816, 1035
BstUI	CGCG	5 cut(s)	47, 387, 422, 550, 790
BstV1I	GCAGC	5 cut(s)	285, 985, 993, 1345, 1372
BstV2I	GAAGAC	1 cut(s)	552
BstXI	CCANNNNNNTGG	2 cut(s)	179, 973
BstZI	CGGCCG	2 cut(s)	345, 791
Bsu15I	ATCGAT	1 cut(s)	1501
BsuRI	GGCC	6 cut(s)	341, 347, 758, 793, 1121, 1331
BsuTUI	ATCGAT	1 cut(s)	1501
BtgI	CCRYGG	3 cut(s)	15, 37, 788
BtrI	CACGTC	2 cut(s)	103, 451
BtsCI	GGATG	3 cut(s)	475, 997, 1669
BtsI	GCAGTG	1 cut(s)	374
BtsIMutI	CAGTG	1 cut(s)	374
BtuMI	TCGCGA	1 cut(s)	550
Cac8I	GCNNGC	5 cut(s)	756, 1065, 1233, 1399, 1749
CfoI	GCGC	7 cut(s)	31, 47, 100, 245, 278, 373, 410
Cfr10I	RCCGGY	1 cut(s)	750
Cfr13I	GGNCC	5 cut(s)	34, 166, 340, 748, 1824
Cfr42I	CCGCGG	1 cut(s)	791
ClaI	ATCGAT	1 cut(s)	1501
CpoI	CGGWCCG	1 cut(s)	748
CseI	GACGC	2 cut(s)	487, 966
Csp6I	GTAC	3 cut(s)	424, 766, 871
CspI	CGGWCCG	1 cut(s)	748
CviQI	GTAC	3 cut(s)	424, 766, 871
DinI	GGCGCC	2 cut(s)	244, 409
DpnI	GATC	9 cut(s)	357, 390, 482, 553, 665, 700, 902, 1500, 1504
DpnII	GATC	9 cut(s)	355, 388, 480, 551, 663, 698, 900, 1498, 1502
DraIII	CACNNNGTG	2 cut(s)	898, 1054
DriI	GACNNNNNGTC	1 cut(s)	976
EaeI	YGGCCR	4 cut(s)	345, 756, 791, 1119
EagI	CGGCCG	2 cut(s)	345, 791
Eam1104I	CTCTTC	4 cut(s)	186, 847, 902, 1536
Eam1105I	GACNNNNNGTC	1 cut(s)	976
EarI	CTCTTC	4 cut(s)	186, 847, 902, 1536
EciI	GGCGGA	2 cut(s)	711, 774
Ecl136II	GAGCTC	3 cut(s)	519, 1201, 1866
EclXI	CGGCCG	2 cut(s)	345, 791
Eco130I	CCWWGG	2 cut(s)	15, 1827
Eco147I	AGGCCT	1 cut(s)	1331
Eco24I	GRGCYC	4 cut(s)	152, 521, 1203, 1868
Eco31I	GGTCTC	1 cut(s)	1835
Eco47I	GGWCC	4 cut(s)	34, 166, 748, 1824
Eco52I	CGGCCG	2 cut(s)	345, 791
Eco53kI	GAGCTC	3 cut(s)	519, 1201, 1866
Eco57I	CTGAAG	1 cut(s)	1127
Eco88I	CYCGRG	1 cut(s)	1202
EcoICRI	GAGCTC	3 cut(s)	519, 1201, 1866
EcoRI	GAATTC	3 cut(s)	622, 704, 1420
EcoRII	CCWGG	2 cut(s)	162, 816
EcoT14I	CCWWGG	2 cut(s)	15, 1827
EcoT22I	ATGCAT	1 cut(s)	1225
EcoT38I	GRGCYC	4 cut(s)	152, 521, 1203, 1868
EgeI	GGCGCC	2 cut(s)	244, 409
EheI	GGCGCC	2 cut(s)	244, 409
ErhI	CCWWGG	2 cut(s)	15, 1827
Esp3I	CGTCTC	2 cut(s)	331, 470
FaqI	GGGAC	1 cut(s)	1094
FauI	CCCGC	4 cut(s)	40, 228, 315, 441
FbaI	TGATCA	2 cut(s)	663, 900
FblI	GTMKAC	1 cut(s)	429
FokI	GGATG	3 cut(s)	482, 1004, 1676
FriOI	GRGCYC	4 cut(s)	152, 521, 1203, 1868
FspBI	CTAG	1 cut(s)	1292
GlaI	GCGC	7 cut(s)	30, 46, 99, 244, 277, 372, 409
GsuI	CTGGAG	1 cut(s)	1649
HaeII	RGCGCY	4 cut(s)	32, 246, 279, 411
HaeIII	GGCC	6 cut(s)	341, 347, 758, 793, 1121, 1331
HapII	CCGG	8 cut(s)	338, 344, 636, 686, 715, 751, 794, 1037
HgaI	GACGC	2 cut(s)	487, 966
HhaI	GCGC	7 cut(s)	31, 47, 100, 245, 278, 373, 410
Hin1I	GRCGYC	4 cut(s)	243, 408, 498, 977
Hin6I	GCGC	7 cut(s)	29, 45, 98, 243, 276, 371, 408
HinP1I	GCGC	7 cut(s)	29, 45, 98, 243, 276, 371, 408
HincII	GTYRAC	1 cut(s)	430
HindII	GTYRAC	1 cut(s)	430
HpaII	CCGG	8 cut(s)	338, 344, 636, 686, 715, 751, 794, 1037
HphI	GGTGA	3 cut(s)	832, 884, 1616
Hpy166II	GTNNAC	3 cut(s)	430, 618, 1721
Hpy8I	GTNNAC	3 cut(s)	430, 618, 1721
Hpy99I	CGWCG	8 cut(s)	107, 259, 289, 431, 452, 503, 673, 982
HpyAV	CCTTC	3 cut(s)	598, 916, 1765
HpyCH4III	ACNGT	5 cut(s)	38, 179, 589, 1432, 1522
HpyCH4IV	ACGT	8 cut(s)	102, 426, 450, 651, 656, 740, 804, 1354
HpyCH4V	TGCA	9 cut(s)	63, 826, 934, 1195, 1223, 1490, 1555, 1583, 1856
HpyF10VI	GCNNNNNNNGC	6 cut(s)	95, 307, 414, 1012, 1385, 1394
HpySE526I	ACGT	8 cut(s)	102, 426, 450, 651, 656, 740, 804, 1354
Hsp92I	GRCGYC	4 cut(s)	243, 408, 498, 977
HspAI	GCGC	7 cut(s)	29, 45, 98, 243, 276, 371, 408
KasI	GGCGCC	2 cut(s)	242, 407
Kpn2I	TCCGGA	1 cut(s)	685
Ksp22I	TGATCA	2 cut(s)	663, 900
KspI	CCGCGG	1 cut(s)	791
Kzo9I	GATC	9 cut(s)	355, 388, 480, 551, 663, 698, 900, 1498, 1502
LmnI	GCTCC	7 cut(s)	422, 524, 572, 844, 1048, 1102, 1198
Lsp1109I	GCAGC	5 cut(s)	285, 985, 993, 1345, 1372
LweI	GCATC	4 cut(s)	813, 1232, 1592, 1654
MaeI	CTAG	1 cut(s)	1292
MaeII	ACGT	8 cut(s)	102, 426, 450, 651, 656, 740, 804, 1354
MaeIII	GTNAC	5 cut(s)	106, 652, 728, 736, 1604
MalI	GATC	9 cut(s)	357, 390, 482, 553, 665, 700, 902, 1500, 1504
MbiI	CCGCTC	1 cut(s)	310
MboI	GATC	9 cut(s)	355, 388, 480, 551, 663, 698, 900, 1498, 1502
MboII	GAAGA	9 cut(s)	203, 546, 552, 769, 864, 919, 1172, 1381, 1523
MhlI	GDGCHC	4 cut(s)	152, 521, 1203, 1868
MlsI	TGGCCA	1 cut(s)	1121
MluCI	AATT	8 cut(s)	265, 622, 704, 1313, 1415, 1420, 1541, 1593
MluNI	TGGCCA	1 cut(s)	1121
Mly113I	GGCGCC	2 cut(s)	243, 408
MlyI	GAGTC	6 cut(s)	211, 514, 623, 720, 1522, 1612
MmeI	TCCRAC	4 cut(s)	318, 447, 546, 594
Mox20I	TGGCCA	1 cut(s)	1121
Mph1103I	ATGCAT	1 cut(s)	1225
MroI	TCCGGA	1 cut(s)	685
MscI	TGGCCA	1 cut(s)	1121
MseI	TTAA	1 cut(s)	1637
MslI	CAYNNNNRTG	1 cut(s)	971
Msp20I	TGGCCA	1 cut(s)	1121
MspA1I	CMGCKG	2 cut(s)	790, 1147
MspI	CCGG	8 cut(s)	338, 344, 636, 686, 715, 751, 794, 1037
MspR9I	CCNGG	6 cut(s)	164, 338, 344, 636, 818, 1037
Mva1269I	GAATGC	2 cut(s)	990, 1490
MvaI	CCWGG	2 cut(s)	164, 818
MvnI	CGCG	5 cut(s)	47, 387, 422, 550, 790
MwoI	GCNNNNNNNGC	6 cut(s)	95, 307, 414, 1012, 1385, 1394
NarI	GGCGCC	2 cut(s)	243, 408
NciI	CCSGG	4 cut(s)	338, 344, 636, 1037
NcoI	CCATGG	1 cut(s)	15
NdeII	GATC	9 cut(s)	355, 388, 480, 551, 663, 698, 900, 1498, 1502
NlaIV	GGNNCC	5 cut(s)	10, 244, 342, 409, 1044
NmeAIII	GCCGAG	3 cut(s)	192, 784, 1828
NmuCI	GTSAC	4 cut(s)	652, 728, 736, 1604
NruI	TCGCGA	1 cut(s)	550
NsiI	ATGCAT	1 cut(s)	1225
NspI	RCATGY	3 cut(s)	1195, 1751, 1768
NspV	TTCGAA	4 cut(s)	185, 263, 593, 1139
PaeI	GCATGC	1 cut(s)	1751
PaeR7I	CTCGAG	1 cut(s)	1202
PceI	AGGCCT	1 cut(s)	1331
PciI	ACATGT	1 cut(s)	1764
PcsI	WCGNNNNNNNCGW	4 cut(s)	213, 260, 554, 674
PctI	GAATGC	2 cut(s)	990, 1490
PfeI	GAWTC	4 cut(s)	350, 595, 1238, 1698
Pfl23II	CGTACG	1 cut(s)	423
PflMI	CCANNNNNTGG	1 cut(s)	1128
PfoI	TCCNGGA	1 cut(s)	634
Ple19I	CGATCG	1 cut(s)	483
PleI	GAGTC	6 cut(s)	210, 513, 622, 719, 1522, 1612
PluTI	GGCGCC	2 cut(s)	246, 411
PpsI	GAGTC	6 cut(s)	210, 513, 622, 719, 1522, 1612
Ppu21I	YACGTR	2 cut(s)	657, 1355
PscI	ACATGT	1 cut(s)	1764
PsiI	TTATAA	1 cut(s)	1301
Psp124BI	GAGCTC	3 cut(s)	521, 1203, 1868
Psp6I	CCWGG	2 cut(s)	162, 816
PspGI	CCWGG	2 cut(s)	162, 816
PspLI	CGTACG	1 cut(s)	423
PspN4I	GGNNCC	5 cut(s)	10, 244, 342, 409, 1044
PspPI	GGNCC	5 cut(s)	34, 166, 340, 748, 1824
PspXI	VCTCGAGB	1 cut(s)	1202
PsrI	GAACNNNNNNTAC	2 cut(s)	758, 790
PvuI	CGATCG	1 cut(s)	483
RruI	TCGCGA	1 cut(s)	550
RsaI	GTAC	3 cut(s)	425, 767, 872
RsaNI	GTAC	3 cut(s)	424, 766, 871
RseI	CAYNNNNRTG	1 cut(s)	971
Rsr2I	CGGWCCG	1 cut(s)	748
RsrII	CGGWCCG	1 cut(s)	748
SacI	GAGCTC	3 cut(s)	521, 1203, 1868
SacII	CCGCGG	1 cut(s)	791
SalI	GTCGAC	1 cut(s)	428
SaqAI	TTAA	1 cut(s)	1637
Sau3AI	GATC	9 cut(s)	355, 388, 480, 551, 663, 698, 900, 1498, 1502
Sau96I	GGNCC	5 cut(s)	34, 166, 340, 748, 1824
ScaI	AGTACT	1 cut(s)	872
SchI	GAGTC	6 cut(s)	211, 514, 623, 720, 1522, 1612
ScrFI	CCNGG	6 cut(s)	164, 338, 344, 636, 818, 1037
SduI	GDGCHC	4 cut(s)	152, 521, 1203, 1868
SfaNI	GCATC	4 cut(s)	813, 1232, 1592, 1654
SfoI	GGCGCC	2 cut(s)	244, 409
Sfr274I	CTCGAG	1 cut(s)	1202
Sfr303I	CCGCGG	1 cut(s)	791
SfuI	TTCGAA	4 cut(s)	185, 263, 593, 1139
SgrBI	CCGCGG	1 cut(s)	791
SinI	GGWCC	4 cut(s)	34, 166, 748, 1824
SlaI	CTCGAG	1 cut(s)	1202
SmiMI	CAYNNNNRTG	1 cut(s)	971
SmlI	CTYRAG	3 cut(s)	874, 1202, 1724
SmoI	CTYRAG	3 cut(s)	874, 1202, 1724
SphI	GCATGC	1 cut(s)	1751
Sse9I	AATT	8 cut(s)	265, 622, 704, 1313, 1415, 1420, 1541, 1593
SseBI	AGGCCT	1 cut(s)	1331
SspDI	GGCGCC	2 cut(s)	242, 407
SspMI	CTAG	1 cut(s)	1292
SstI	GAGCTC	3 cut(s)	521, 1203, 1868
StuI	AGGCCT	1 cut(s)	1331
StyD4I	CCNGG	6 cut(s)	162, 336, 342, 634, 816, 1035
StyI	CCWWGG	2 cut(s)	15, 1827
TaaI	ACNGT	5 cut(s)	38, 179, 589, 1432, 1522
TaiI	ACGT	8 cut(s)	105, 429, 453, 654, 659, 743, 807, 1357
TasI	AATT	8 cut(s)	265, 622, 704, 1313, 1415, 1420, 1541, 1593
TatI	WGTACW	1 cut(s)	870
TauI	GCSGC	9 cut(s)	14, 29, 226, 243, 721, 790, 793, 890, 1077
TfiI	GAWTC	4 cut(s)	350, 595, 1238, 1698
Tru1I	TTAA	1 cut(s)	1637
Tru9I	TTAA	1 cut(s)	1637
TscAI	CASTG	1 cut(s)	381
TseFI	GTSAC	4 cut(s)	652, 728, 736, 1604
TseI	GCWGC	5 cut(s)	273, 998, 1006, 1358, 1385
Tsp45I	GTSAC	4 cut(s)	652, 728, 736, 1604
TspDTI	ATGAA	4 cut(s)	769, 1382, 1539, 1772
TspGWI	ACGGA	2 cut(s)	453, 942
TspRI	CASTG	1 cut(s)	381
Van91I	CCANNNNNTGG	1 cut(s)	1128
VpaK11BI	GGWCC	4 cut(s)	34, 166, 748, 1824
XapI	RAATTY	5 cut(s)	622, 704, 1313, 1420, 1593
XceI	RCATGY	3 cut(s)	1195, 1751, 1768
XcmI	CCANNNNNNNNNTGG	2 cut(s)	176, 1460
XhoI	CTCGAG	1 cut(s)	1202
XmiI	GTMKAC	1 cut(s)	429
XspI	CTAG	1 cut(s)	1292
ZrmI	AGTACT	1 cut(s)	872
Zsp2I	ATGCAT	1 cut(s)	1225

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.