Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0010972

Physical Location & Seq

Genomic Coordinates Reverse (-)

3449637 .. 3454756

Gene Structure 5120 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G048200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGATGGGCTCTGAAAAACAGGGCATTGAAGAAGCCCAGCTCTACGCGTCCAAGGAAGAAATGGAAAATCTCGTGCTCGACGACCCTTTGAACGGCAATAAATCGTACTCGAGTTATCGCAGCACCATGTCGTCGCTCTCCGATACGCACCACCCTCTCTCCTCGTCGTCCCCGCTCGTCTCCGCCACCACCGCCGCTGCCCCAGCCGACGCCGATCCCCTAATATCGCCCCTACCGTACCGCGATCTCCGAAACCCTAACTCTGCCCCCGATAACTCCACATACCTCGACCCGCCTGCTTACGCCGACGTGATATTCAGTCCCTTCGATGCCGACACCATCGCCGAAATCAACGGCATCGAGAGCCCCAGCAAGAGCTCCGACAATTCGAGCTCGTACTCTCTCTCGCGATCTCCGTCTTCCACCTCCGAGTACATTAAAATCACGGTCTCGAATCCTCAGAAAGAGCAGGAGACCACGAATTCGATCGTTCCGGGAGGTAACACCTATGTCACGTACCTGATCACGACTCGGACGAACATTCCGGATTTCGGCGGATCGGAATTCGGAGTCCGACGACGGTTCCGAGACGTGGTGACGTTATCGGACCGGTTGGCCGAGTCGTACAGAGGGTTCTTTATACCGCCGAGGCCGGACAAGAGCGTGGTGGAGAGTCAGGTGATGCAGAAACAGGAGTTTGTGGAGCAGAGAAGAGTGGCATTGGAAAAGTACTTGAGGCGATTGGCTTCACACCCAGTGATCAAGAGAAGCGACGAATTGAAGGTCTTTTTGCAGGTTCAGGGGAGGCTTCCGCTGCCGTTGACCACTGATGTGGCGTCGAGGATGCTTGATGGGGCAGTGAAGCTTCCAAAGCAGCTGTTCGGGGAGAGCGGGGCGGTACTGGCGCCACAAGAGGTGGTTCAGCCGGCGAAGGGCGGGAGGGATTTGTTGAGGTTGTTCAAGGAGTTGAAGCAGTCTATGTCTAATGATTGGGGAGCTTCGAAGCCGCTGGTGGGGGAGGAGGACAAGGAGTTTTTGGAGAAGAAAGAGAAGATGCAGGAGCTGGAGCAACAGCTCAGCAATGCGTCTCAGCAGGCTGAATCACTTGTGAAAGCCCAACAAGACATGGGAGAGACAATGGGAGAGTTAGGACTGGCGTTTATAAAACTGACCAAGTTTGAGAATGAGGAGGCATTGTTCAACTCTCAAAGAGTGCGAGCAGCTGACATGAAGAATGTGGCAACTGCTGCAGTCAAAGCTAGCAGATTCTATCGAGAGTTAAATGCTCAGACTGTCAAACATTTGGACACGTTCCATGAATATCTTGGGCTTATGTTAGCTGTCAACAGTGCGTTCTCAGATCGGTCAAGTGCTTTATTAACAGTGCAGACTCTACTATCAGAACTGGATATGCTGCAATCAAGAGCTGAAAAACTTGAAGTTCAATCAAATAAAATATTTGGTGGCGACAAATCAAGGATTCGCAAGCTAGAGGAGTTAAATGAAACCATAAGAGTCACTGAGGATGCTAAAAATGTGGCAATCAGAGAATATGAGCGGATCAAGGAAAATAACAAGAGTGAACTTGAAAGGCTTGACAACGAGAGGCATGCTGACTTCTTGAACATGTTGAAGGGATTTGTGCTTAATCAGGTGGGATATGCTGAAAAAATTTCAAATGTGTGGTCAAAGGTTGCCGAAGAGACCAGTTCGTATTCTAGAGAGAGCACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0005794 GO:0005802 GO:0005829 GO:0006807 GO:0006810 GO:0006897 GO:0006996 GO:0007034 GO:0007275 GO:0008150 GO:0008152 GO:0008289 GO:0009791 GO:0009987 GO:0010008 GO:0010467 GO:0012505 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0019538 GO:0019898 GO:0030904 GO:0031090 GO:0031410 GO:0031902 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032585 GO:0032588 GO:0032991 GO:0035091 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043621 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045324 GO:0046907 GO:0046982 GO:0046983 GO:0048856 GO:0051179 GO:0051234 GO:0051604 GO:0051641 GO:0051649 GO:0071704 GO:0071840 GO:0090351 GO:0097708 GO:0098588 GO:0098657 GO:0098791 GO:0098796 GO:0098805 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

PX Vps5

Protein Analysis

578

Amino Acids

64.55

Weight (kDa)

5.36

Isoelectric Point (pI)

49.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07120 AT5G07120 AT5G07120 AT5G58440
fragaria_vesca	FvH4_3g39770
malus_domestica	MD03G1056600.v1.1 MD11G1058400.v1.1
prunus_persica	Prupe.6G048200_v2.0.a1
pyrus_communis	pycom11g04840
rosa_chinensis	RchiOBHm_Chr5g0071651
rosa_laevigata	RLG00000036238
rosa_multiflora	Rmu_sc0002060.1_g000020 Rmu_sc0005745.1_g000035 Rmu_sc0006567.1_g000005
rosa_roxburghii	Rroxscaffold_1G00009520
rosa_rugosa	Rorug05G0414000
rosa_samantha	Rh5BG489500 Rh5CG513300 Rh5DG500300
rosa_wichuraiana	Rw5G043660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1163
Acc36I	ACCTGC	1 cut(s)	784
AccB1I	GGYRCC	1 cut(s)	904
AccBSI	CCGCTC	3 cut(s)	175, 891, 1558
AccII	CGCG	3 cut(s)	47, 243, 409
AccIII	TCCGGA	1 cut(s)	544
AclWI	GGATC	3 cut(s)	209, 565, 1568
AcoI	YGGCCR	1 cut(s)	615
AcsI	RAATTY	3 cut(s)	481, 563, 1671
AcyI	GRCGYC	3 cut(s)	210, 836, 905
AdeI	CACNNNGTG	1 cut(s)	757
AfaI	GTAC	8 cut(s)	107, 239, 398, 434, 518, 626, 731, 900
AfiI	CCNNNNNNNGG	5 cut(s)	92, 551, 592, 932, 1013
AflIII	ACRYGT	3 cut(s)	45, 1308, 1626
AgeI	ACCGGT	1 cut(s)	609
AjiI	CACGTC	2 cut(s)	310, 592
AleI	CACNNNNGTG	1 cut(s)	830
AloI	GAACNNNNNNTCC	2 cut(s)	1181, 1213
Alw21I	GWGCWC	4 cut(s)	78, 380, 395, 1730
Alw26I	GTCTC	7 cut(s)	184, 454, 467, 582, 1092, 1127, 1697
AlwI	GGATC	3 cut(s)	209, 565, 1568
AlwNI	CAGNNNCTG	1 cut(s)	1063
Ama87I	CYCGRG	1 cut(s)	109
Aor13HI	TCCGGA	1 cut(s)	544
AoxI	GGCC	2 cut(s)	615, 650
ApeKI	GCWGC	7 cut(s)	120, 197, 814, 874, 1220, 1247, 1414
ApoI	RAATTY	3 cut(s)	481, 563, 1671
ArsI	GACNNNNNNTTYG	6 cut(s)	466, 498, 768, 800, 1670, 1702
AsiGI	ACCGGT	1 cut(s)	609
AspLEI	GCGC	1 cut(s)	907
AspS9I	GGNCC	1 cut(s)	607
AsuC2I	CCSGG	1 cut(s)	495
AsuHPI	GGTGA	2 cut(s)	607, 691
AsuII	TTCGAA	1 cut(s)	1001
AsuNHI	GCTAGC	1 cut(s)	1259
AvaI	CYCGRG	1 cut(s)	109
AvaII	GGWCC	1 cut(s)	607
BanI	GGYRCC	1 cut(s)	904
BanII	GRGCYC	4 cut(s)	11, 368, 380, 395
BauI	CACGAG	1 cut(s)	71
BbsI	GAAGAC	1 cut(s)	411
Bbv12I	GWGCWC	4 cut(s)	78, 380, 395, 1730
BbvI	GCAGC	7 cut(s)	132, 184, 801, 886, 1232, 1234, 1401
BccI	CCATC	2 cut(s)	347, 845
BceAI	ACGGC	3 cut(s)	109, 370, 802
BcgI	CGANNNNNNTGC	4 cut(s)	278, 312, 1592, 1626
BclI	TGATCA	2 cut(s)	522, 759
BcnI	CCSGG	1 cut(s)	495
BcoDI	GTCTC	7 cut(s)	184, 454, 467, 582, 1092, 1127, 1697
BfaI	CTAG	3 cut(s)	1260, 1490, 1719
BfmI	CTRYAG	1 cut(s)	1248
BfoI	RGCGCY	1 cut(s)	908
BfuAI	ACCTGC	1 cut(s)	784
BisI	GCNGC	9 cut(s)	121, 195, 198, 815, 875, 1007, 1221, 1248, 1415
BlpI	GCTNAGC	1 cut(s)	1076
BlsI	GCNGC	9 cut(s)	122, 196, 199, 816, 876, 1008, 1222, 1249, 1416
BmcAI	AGTACT	1 cut(s)	731
Bme1390I	CCNGG	1 cut(s)	495
Bme18I	GGWCC	1 cut(s)	607
BmeT110I	CYCGRG	1 cut(s)	109
BmgBI	CACGTC	2 cut(s)	310, 592
BmgT120I	GGNCC	1 cut(s)	607
BmiI	GGNNCC	2 cut(s)	584, 906
BmrFI	CCNGG	1 cut(s)	495
BmrI	ACTGGG	1 cut(s)	749
BmsI	GCATC	6 cut(s)	319, 366, 672, 834, 1044, 1516
BmtI	GCTAGC	1 cut(s)	1263
BmuI	ACTGGG	1 cut(s)	749
BpiI	GAAGAC	1 cut(s)	411
BpmI	CTGGAG	1 cut(s)	1085
Bpu1102I	GCTNAGC	1 cut(s)	1076
Bpu14I	TTCGAA	1 cut(s)	1001
BpuEI	CTTGAG	1 cut(s)	754
BpuMI	CCSGG	1 cut(s)	495
BsaAI	YACGTR	1 cut(s)	516
BsaHI	GRCGYC	3 cut(s)	210, 836, 905
BsaI	GGTCTC	3 cut(s)	454, 467, 1697
BsaJI	CCNNGG	2 cut(s)	51, 647
BsaWI	WCCGGW	2 cut(s)	544, 609
BsaXI	ACNNNNNCTCC	4 cut(s)	143, 173, 1181, 1211
Bsc4I	CCNNNNNNNGG	5 cut(s)	92, 551, 592, 932, 1013
Bse118I	RCCGGY	2 cut(s)	609, 925
Bse1I	ACTGG	5 cut(s)	755, 906, 1158, 1410, 1707
Bse3DI	GCAATG	1 cut(s)	1087
BseAI	TCCGGA	1 cut(s)	544
BseDI	CCNNGG	2 cut(s)	51, 647
BseGI	GGATG	2 cut(s)	849, 1531
BseLI	CCNNNNNNNGG	5 cut(s)	92, 551, 592, 932, 1013
BseMI	GCAATG	1 cut(s)	1087
BseMII	CTCAG	6 cut(s)	473, 1090, 1103, 1301, 1371, 1512
BseNI	ACTGG	5 cut(s)	755, 906, 1158, 1410, 1707
BseRI	GAGGAG	4 cut(s)	151, 1034, 1202, 1508
BseXI	GCAGC	7 cut(s)	132, 184, 801, 886, 1232, 1234, 1401
BseYI	CCCAGC	3 cut(s)	36, 202, 368
BsgI	GTGCAG	1 cut(s)	1406
Bsh1236I	CGCG	3 cut(s)	47, 243, 409
Bsh1285I	CGRYCG	1 cut(s)	489
BshFI	GGCC	2 cut(s)	617, 652
BshNI	GGYRCC	1 cut(s)	904
BshTI	ACCGGT	1 cut(s)	609
BsiEI	CGRYCG	1 cut(s)	489
BsiHKAI	GWGCWC	4 cut(s)	78, 380, 395, 1730
BsiHKCI	CYCGRG	1 cut(s)	109
BsiSI	CCGG	5 cut(s)	494, 545, 610, 653, 926
BslFI	GGGAC	2 cut(s)	154, 306
BslI	CCNNNNNNNGG	5 cut(s)	92, 551, 592, 932, 1013
BsmAI	GTCTC	7 cut(s)	184, 454, 467, 582, 1092, 1127, 1697
BsmBI	CGTCTC	3 cut(s)	184, 582, 1092
BsmFI	GGGAC	2 cut(s)	154, 306
BsnI	GGCC	2 cut(s)	617, 652
Bso31I	GGTCTC	3 cut(s)	454, 467, 1697
BsoBI	CYCGRG	1 cut(s)	109
Bsp119I	TTCGAA	1 cut(s)	1001
Bsp1286I	GDGCHC	6 cut(s)	11, 78, 368, 380, 395, 1730
Bsp13I	TCCGGA	1 cut(s)	544
Bsp143I	GATC	9 cut(s)	214, 244, 410, 486, 522, 557, 759, 1360, 1560
Bsp1720I	GCTNAGC	1 cut(s)	1076
Bsp68I	TCGCGA	1 cut(s)	409
BspANI	GGCC	2 cut(s)	617, 652
BspCNI	CTCAG	6 cut(s)	472, 1089, 1102, 1300, 1370, 1513
BspEI	TCCGGA	1 cut(s)	544
BspFNI	CGCG	3 cut(s)	47, 243, 409
BspLI	GGNNCC	2 cut(s)	584, 906
BspMAI	CTGCAG	1 cut(s)	1252
BspMI	ACCTGC	1 cut(s)	784
BspOI	GCTAGC	1 cut(s)	1263
BspPI	GGATC	3 cut(s)	209, 565, 1568
BspT104I	TTCGAA	1 cut(s)	1001
BspT107I	GGYRCC	1 cut(s)	904
BspTNI	GGTCTC	3 cut(s)	454, 467, 1697
BsrBI	CCGCTC	3 cut(s)	175, 891, 1558
BsrDI	GCAATG	1 cut(s)	1087
BsrFI	RCCGGY	2 cut(s)	609, 925
BsrI	ACTGG	5 cut(s)	755, 906, 1158, 1410, 1707
BssAI	RCCGGY	2 cut(s)	609, 925
BssECI	CCNNGG	2 cut(s)	51, 647
BssMI	GATC	9 cut(s)	214, 244, 410, 486, 522, 557, 759, 1360, 1560
BssNI	GRCGYC	3 cut(s)	210, 836, 905
BssSI	CACGAG	1 cut(s)	71
BssT1I	CCWWGG	1 cut(s)	51
Bst2BI	CACGAG	1 cut(s)	71
Bst4CI	ACNGT	6 cut(s)	237, 448, 582, 1294, 1349, 1384
Bst6I	CTCTTC	2 cut(s)	706, 1695
BstACI	GRCGYC	3 cut(s)	210, 836, 905
BstAPI	GCANNNNNTGC	1 cut(s)	1247
BstBAI	YACGTR	1 cut(s)	516
BstBI	TTCGAA	1 cut(s)	1001
BstC8I	GCNNGC	7 cut(s)	297, 927, 1095, 1218, 1261, 1487, 1611
BstDEI	CTNAG	6 cut(s)	459, 1076, 1089, 1287, 1357, 1521
BstF5I	GGATG	2 cut(s)	849, 1531
BstFNI	CGCG	3 cut(s)	47, 243, 409
BstH2I	RGCGCY	1 cut(s)	908
BstHHI	GCGC	1 cut(s)	907
BstKTI	GATC	9 cut(s)	217, 247, 413, 489, 525, 560, 762, 1363, 1563
BstMAI	GTCTC	7 cut(s)	184, 454, 467, 582, 1092, 1127, 1697
BstMBI	GATC	9 cut(s)	214, 244, 410, 486, 522, 557, 759, 1360, 1560
BstMCI	CGRYCG	1 cut(s)	489
BstMWI	GCNNNNNNNGC	8 cut(s)	191, 203, 363, 814, 871, 902, 1247, 1256
BstNSI	RCATGY	2 cut(s)	1613, 1630
BstSCI	CCNGG	1 cut(s)	493
BstSFI	CTRYAG	1 cut(s)	1248
BstUI	CGCG	3 cut(s)	47, 243, 409
BstV1I	GCAGC	7 cut(s)	132, 184, 801, 886, 1232, 1234, 1401
BstV2I	GAAGAC	1 cut(s)	411
BstXI	CCANNNNNNTGG	1 cut(s)	832
BsuRI	GGCC	2 cut(s)	617, 652
BtgZI	GCGATG	1 cut(s)	325
BtrI	CACGTC	2 cut(s)	310, 592
BtsCI	GGATG	2 cut(s)	849, 1531
BtsI	GCAGTG	1 cut(s)	864
BtsIMutI	CAGTG	6 cut(s)	762, 825, 864, 1354, 1389, 1518
BtuMI	TCGCGA	1 cut(s)	409
BveI	ACCTGC	1 cut(s)	784
Cac8I	GCNNGC	7 cut(s)	297, 927, 1095, 1218, 1261, 1487, 1611
CaiI	CAGNNNCTG	1 cut(s)	1063
CfoI	GCGC	1 cut(s)	907
Cfr10I	RCCGGY	2 cut(s)	609, 925
Cfr13I	GGNCC	1 cut(s)	607
CpoI	CGGWCCG	1 cut(s)	607
CseI	GACGC	4 cut(s)	36, 218, 825, 1074
Csp6I	GTAC	8 cut(s)	106, 238, 397, 433, 517, 625, 730, 899
CspAI	ACCGGT	1 cut(s)	609
CspI	CGGWCCG	1 cut(s)	607
CviAII	CATG	6 cut(s)	127, 1126, 1228, 1316, 1610, 1627
CviQI	GTAC	8 cut(s)	106, 238, 397, 433, 517, 625, 730, 899
DdeI	CTNAG	6 cut(s)	459, 1076, 1089, 1287, 1357, 1521
DinI	GGCGCC	1 cut(s)	906
DpnI	GATC	9 cut(s)	216, 246, 412, 488, 524, 559, 761, 1362, 1562
DpnII	GATC	9 cut(s)	214, 244, 410, 486, 522, 557, 759, 1360, 1560
DraIII	CACNNNGTG	1 cut(s)	757
EaeI	YGGCCR	1 cut(s)	615
Eam1104I	CTCTTC	2 cut(s)	706, 1695
EarI	CTCTTC	2 cut(s)	706, 1695
EciI	GGCGGA	2 cut(s)	172, 570
Ecl136II	GAGCTC	2 cut(s)	378, 393
Eco130I	CCWWGG	1 cut(s)	51
Eco24I	GRGCYC	4 cut(s)	11, 368, 380, 395
Eco31I	GGTCTC	3 cut(s)	454, 467, 1697
Eco47I	GGWCC	1 cut(s)	607
Eco53kI	GAGCTC	2 cut(s)	378, 393
Eco88I	CYCGRG	1 cut(s)	109
EcoICRI	GAGCTC	2 cut(s)	378, 393
EcoRI	GAATTC	2 cut(s)	481, 563
EcoT14I	CCWWGG	1 cut(s)	51
EcoT38I	GRGCYC	4 cut(s)	11, 368, 380, 395
EgeI	GGCGCC	1 cut(s)	906
EheI	GGCGCC	1 cut(s)	906
ErhI	CCWWGG	1 cut(s)	51
Esp3I	CGTCTC	3 cut(s)	184, 582, 1092
FaeI	CATG	6 cut(s)	130, 1129, 1231, 1319, 1613, 1630
FaqI	GGGAC	2 cut(s)	154, 306
FatI	CATG	6 cut(s)	126, 1125, 1227, 1315, 1609, 1626
FauI	CCCGC	4 cut(s)	180, 300, 884, 929
FbaI	TGATCA	2 cut(s)	522, 759
Fnu4HI	GCNGC	9 cut(s)	121, 195, 198, 815, 875, 1007, 1221, 1248, 1415
FokI	GGATG	2 cut(s)	856, 1538
FriOI	GRGCYC	4 cut(s)	11, 368, 380, 395
Fsp4HI	GCNGC	9 cut(s)	121, 195, 198, 815, 875, 1007, 1221, 1248, 1415
FspBI	CTAG	3 cut(s)	1260, 1490, 1719
GlaI	GCGC	1 cut(s)	906
GluI	GCNGC	9 cut(s)	121, 195, 198, 815, 875, 1007, 1221, 1248, 1415
GsaI	CCCAGC	3 cut(s)	40, 206, 372
GsuI	CTGGAG	1 cut(s)	1085
HaeII	RGCGCY	1 cut(s)	908
HaeIII	GGCC	2 cut(s)	617, 652
HapII	CCGG	5 cut(s)	494, 545, 610, 653, 926
HgaI	GACGC	4 cut(s)	36, 218, 825, 1074
HhaI	GCGC	1 cut(s)	907
Hin1I	GRCGYC	3 cut(s)	210, 836, 905
Hin1II	CATG	6 cut(s)	130, 1129, 1231, 1319, 1613, 1630
Hin6I	GCGC	1 cut(s)	905
HinP1I	GCGC	1 cut(s)	905
HincII	GTYRAC	2 cut(s)	822, 1345
HindII	GTYRAC	2 cut(s)	822, 1345
HindIII	AAGCTT	1 cut(s)	863
HpaII	CCGG	5 cut(s)	494, 545, 610, 653, 926
HphI	GGTGA	2 cut(s)	607, 691
Hpy166II	GTNNAC	3 cut(s)	822, 1345, 1583
Hpy8I	GTNNAC	3 cut(s)	822, 1345, 1583
Hpy99I	CGWCG	9 cut(s)	83, 136, 169, 212, 311, 579, 582, 776, 841
HpyAV	CCTTC	4 cut(s)	334, 775, 925, 1627
HpyCH4III	ACNGT	6 cut(s)	237, 448, 582, 1294, 1349, 1384
HpyCH4IV	ACGT	5 cut(s)	309, 515, 591, 599, 1310
HpyCH4V	TGCA	6 cut(s)	685, 793, 1057, 1250, 1387, 1417
HpyF10VI	GCNNNNNNNGC	8 cut(s)	191, 203, 363, 814, 871, 902, 1247, 1256
HpyF3I	CTNAG	6 cut(s)	459, 1076, 1089, 1287, 1357, 1521
HpySE526I	ACGT	5 cut(s)	309, 515, 591, 599, 1310
Hsp92I	GRCGYC	3 cut(s)	210, 836, 905
Hsp92II	CATG	6 cut(s)	130, 1129, 1231, 1319, 1613, 1630
HspAI	GCGC	1 cut(s)	905
KasI	GGCGCC	1 cut(s)	904
Kpn2I	TCCGGA	1 cut(s)	544
KroI	GCCGGC	1 cut(s)	925
KroNI	GCCGGC	1 cut(s)	927
Ksp22I	TGATCA	2 cut(s)	522, 759
Kzo9I	GATC	9 cut(s)	214, 244, 410, 486, 522, 557, 759, 1360, 1560
LmnI	GCTCC	5 cut(s)	383, 703, 995, 1060, 1066
Lsp1109I	GCAGC	7 cut(s)	132, 184, 801, 886, 1232, 1234, 1401
LweI	GCATC	6 cut(s)	319, 366, 672, 834, 1044, 1516
MaeI	CTAG	3 cut(s)	1260, 1490, 1719
MaeII	ACGT	5 cut(s)	309, 515, 591, 599, 1310
MaeIII	GTNAC	4 cut(s)	500, 511, 595, 1516
MalI	GATC	9 cut(s)	216, 246, 412, 488, 524, 559, 761, 1362, 1562
MbiI	CCGCTC	3 cut(s)	175, 891, 1558
MboI	GATC	9 cut(s)	214, 244, 410, 486, 522, 557, 759, 1360, 1560
MboII	GAAGA	8 cut(s)	41, 68, 411, 723, 1054, 1063, 1243, 1712
MhlI	GDGCHC	6 cut(s)	11, 78, 368, 380, 395, 1730
MluCI	AATT	5 cut(s)	385, 481, 563, 776, 1671
MluI	ACGCGT	1 cut(s)	45
Mly113I	GGCGCC	1 cut(s)	905
MlyI	GAGTC	6 cut(s)	523, 579, 629, 682, 1384, 1524
MmeI	TCCRAC	2 cut(s)	405, 598
MroI	TCCGGA	1 cut(s)	544
MroNI	GCCGGC	1 cut(s)	925
MseI	TTAA	5 cut(s)	438, 1280, 1379, 1499, 1647
MslI	CAYNNNNRTG	1 cut(s)	830
MspA1I	CMGCKG	5 cut(s)	197, 814, 877, 1009, 1223
MspI	CCGG	5 cut(s)	494, 545, 610, 653, 926
MspR9I	CCNGG	1 cut(s)	495
MvnI	CGCG	3 cut(s)	47, 243, 409
MwoI	GCNNNNNNNGC	8 cut(s)	191, 203, 363, 814, 871, 902, 1247, 1256
NaeI	GCCGGC	1 cut(s)	927
NarI	GGCGCC	1 cut(s)	905
NciI	CCSGG	1 cut(s)	495
NdeII	GATC	9 cut(s)	214, 244, 410, 486, 522, 557, 759, 1360, 1560
NgoMIV	GCCGGC	1 cut(s)	925
NheI	GCTAGC	1 cut(s)	1259
NlaIII	CATG	6 cut(s)	130, 1129, 1231, 1319, 1613, 1630
NlaIV	GGNNCC	2 cut(s)	584, 906
NmeAIII	GCCGAG	2 cut(s)	643, 672
NmuCI	GTSAC	3 cut(s)	511, 595, 1516
NruI	TCGCGA	1 cut(s)	409
NspI	RCATGY	2 cut(s)	1613, 1630
NspV	TTCGAA	1 cut(s)	1001
OliI	CACNNNNGTG	1 cut(s)	830
PaeI	GCATGC	1 cut(s)	1613
PaeR7I	CTCGAG	1 cut(s)	109
PciI	ACATGT	1 cut(s)	1626
PcsI	WCGNNNNNNNCGW	5 cut(s)	78, 233, 413, 533, 583
PdiI	GCCGGC	1 cut(s)	927
PfeI	GAWTC	4 cut(s)	454, 1100, 1266, 1480
PfoI	TCCNGGA	1 cut(s)	493
PinAI	ACCGGT	1 cut(s)	609
PkrI	GCNGC	9 cut(s)	122, 196, 199, 816, 876, 1008, 1222, 1249, 1416
Ple19I	CGATCG	1 cut(s)	489
PleI	GAGTC	6 cut(s)	523, 578, 628, 681, 1384, 1523
PluTI	GGCGCC	1 cut(s)	908
PpsI	GAGTC	6 cut(s)	523, 578, 628, 681, 1384, 1523
Ppu21I	YACGTR	1 cut(s)	516
PscI	ACATGT	1 cut(s)	1626
PsiI	TTATAA	1 cut(s)	1163
Psp124BI	GAGCTC	2 cut(s)	380, 395
PspFI	CCCAGC	3 cut(s)	36, 202, 368
PspN4I	GGNNCC	2 cut(s)	584, 906
PspPI	GGNCC	1 cut(s)	607
PspXI	VCTCGAGB	1 cut(s)	109
PsrI	GAACNNNNNNTAC	2 cut(s)	617, 649
PstI	CTGCAG	1 cut(s)	1252
PstNI	CAGNNNCTG	1 cut(s)	1063
PvuI	CGATCG	1 cut(s)	489
PvuII	CAGCTG	2 cut(s)	877, 1223
RruI	TCGCGA	1 cut(s)	409
RsaI	GTAC	8 cut(s)	107, 239, 398, 434, 518, 626, 731, 900
RsaNI	GTAC	8 cut(s)	106, 238, 397, 433, 517, 625, 730, 899
RseI	CAYNNNNRTG	1 cut(s)	830
Rsr2I	CGGWCCG	1 cut(s)	607
RsrII	CGGWCCG	1 cut(s)	607
SacI	GAGCTC	2 cut(s)	380, 395
SaqAI	TTAA	5 cut(s)	438, 1280, 1379, 1499, 1647
SatI	GCNGC	9 cut(s)	121, 195, 198, 815, 875, 1007, 1221, 1248, 1415
Sau3AI	GATC	9 cut(s)	214, 244, 410, 486, 522, 557, 759, 1360, 1560
Sau96I	GGNCC	1 cut(s)	607
ScaI	AGTACT	1 cut(s)	731
SchI	GAGTC	6 cut(s)	523, 579, 629, 682, 1384, 1524
ScrFI	CCNGG	1 cut(s)	495
SduI	GDGCHC	6 cut(s)	11, 78, 368, 380, 395, 1730
SfaNI	GCATC	6 cut(s)	319, 366, 672, 834, 1044, 1516
SfcI	CTRYAG	1 cut(s)	1248
SfoI	GGCGCC	1 cut(s)	906
Sfr274I	CTCGAG	1 cut(s)	109
SfuI	TTCGAA	1 cut(s)	1001
SinI	GGWCC	1 cut(s)	607
SlaI	CTCGAG	1 cut(s)	109
SmiMI	CAYNNNNRTG	1 cut(s)	830
SmlI	CTYRAG	2 cut(s)	109, 733
SmoI	CTYRAG	2 cut(s)	109, 733
SphI	GCATGC	1 cut(s)	1613
Sse9I	AATT	5 cut(s)	385, 481, 563, 776, 1671
SspDI	GGCGCC	1 cut(s)	904
SspI	AATATT	1 cut(s)	1458
SspMI	CTAG	3 cut(s)	1260, 1490, 1719
SstI	GAGCTC	2 cut(s)	380, 395
StyD4I	CCNGG	1 cut(s)	493
StyI	CCWWGG	1 cut(s)	51
TaaI	ACNGT	6 cut(s)	237, 448, 582, 1294, 1349, 1384
TaiI	ACGT	5 cut(s)	312, 518, 594, 602, 1313
TaqII	GACCGA	1 cut(s)	1353
TasI	AATT	5 cut(s)	385, 481, 563, 776, 1671
TatI	WGTACW	2 cut(s)	432, 729
TauI	GCSGC	2 cut(s)	197, 1009
TfiI	GAWTC	4 cut(s)	454, 1100, 1266, 1480
Tru1I	TTAA	5 cut(s)	438, 1280, 1379, 1499, 1647
Tru9I	TTAA	5 cut(s)	438, 1280, 1379, 1499, 1647
TscAI	CASTG	6 cut(s)	762, 832, 864, 1354, 1389, 1525
TseFI	GTSAC	3 cut(s)	511, 595, 1516
TseI	GCWGC	7 cut(s)	120, 197, 814, 874, 1220, 1247, 1414
Tsp45I	GTSAC	3 cut(s)	511, 595, 1516
TspDTI	ATGAA	3 cut(s)	1244, 1332, 1518
TspGWI	ACGGA	1 cut(s)	405
TspRI	CASTG	6 cut(s)	762, 832, 864, 1354, 1389, 1525
VpaK11BI	GGWCC	1 cut(s)	607
XapI	RAATTY	3 cut(s)	481, 563, 1671
XbaI	TCTAGA	1 cut(s)	1718
XceI	RCATGY	2 cut(s)	1613, 1630
XcmI	CCANNNNNNNNNTGG	2 cut(s)	58, 1322
XhoI	CTCGAG	1 cut(s)	109
XspI	CTAG	3 cut(s)	1260, 1490, 1719
ZrmI	AGTACT	1 cut(s)	731

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.