Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0010972

Physical Location & Seq

Genomic Coordinates Forward (+)

4960116 .. 4964418

Gene Structure 4303 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1058400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGATGGGCTCTGAGAACCGGGGCTCCGGCGAAGCCCACCTCCACGCGCCGAAAGAAGACATGGAGGATCTCGTCCTCTACGGTCAATTGAATGGCAATAAATCGTACTCGAATTATCGCAGCGCCATGTCGTCGCTCTCAGATACGACGCACCCCCTCTCGTCGTCGCCGTCCTCCTCCCATATCGTCTCCGCCGCCGCCTCAGCCTCCGCCACCACCGCCGCAACAGCGCCAGCCGACTCTGATCCCCTTTTCGCGCCCTCACCGTATCGTGATCTGCGAAACCCTAGCTCGGCCCCTGATAACTCCACGTACCTCGATACGCCTTCGTACGCCGACGTGGCCTTCAGCCCCTTCGATGCTGCAACCGCCGCCGAAATCAACGGCATCGAGAGCCCCGGCAAGAGCTCCGACAACTCGAGCTCGTACTCTCTCTCGCGATCTCCGTCTTCCTCTTCCGAGTACCTAAAAATCACGGTCTCGAATCCGCAGAAGGAGCAGGAAGGCGCGAATTCGATCGTTCCGGGAGCTAACACATACGTCACGTACCTGATCAAGACTCGGACGAACATTCCGGATTTCGGGGGATCGGAATTCGGTGCCCGGCGGCGGTTTCGGGACGTGGTGACGTTATCGGACCGATTGGCGGAGTCGTACAGAGGGTTTTTTATACCGCCAAGGCCGGACAAGAGCGTGGTGGAGAGTCAGGTGATGCAGAAACAGGAGTTCGTGGAGCAGAGAAGAGTGGCATTGGAGAAATACTTGAGGCGATTGGCTTCGCACCCAGTGATCAAGAGAAGCGACGAATTGAAGGTGTTTTTGCAGGTGCAGGGGAAGCTTCCCCTGGCATTAACCACTGATATGGCGTCTAGGATGCTTGATGGGGCGGTGAAGCTTCCTAAGCAGTTGTTTGGGGAGAGTGGGGCGGTACTGGCGCCTCACGAGGTGGTTCAGCCTGCAAAAGGCGGCAGGGATTTGTTGAGGTTGTTCAAGGAGTTGAAGCAGTCTGTAGCTAATGACTGGGGAGCTTCGAGGCCGCTGGCGGGGGAGGAGGATAAGGAGTTTTTAGAAAAGAAAGTGAAGATGAACGAGCTGGAGCAACAGCTCAGCAATGCATCTCAGCAGGCCGAATCACTTGTTAAAGCTCAACAAGACATGGGAGAGACGTTGGGAGAGTTAGGACTAGCGTTTATTAAGCTGACCAAATTTGAGAACGAGGAGGCCTTGTTCAGCTCTCAGAGAGTGCGGGCTGCCGACATGAAGAATGTGGCAACTGCTGCAGTCAAAGCCAGCAGATTCTATCGGGAGTTAAATGCTCAAACCGTCAAGCATTTGGATACATTTCATGAATATCTCGGGCTAATGTTAGCTGTCAACGGTGCATTCTCAGATAGGTCAAGTGCTCTGTTGACAGTGCAGACTCTTCTATCAGAATTGGGTTCGCTGCAATCACGAGCTGAAAAACTTGAAGTTCAATCCAATAAAATATTTGGCGGTGACAAATCAAGGATTCGTAAGCTAGAGGAGTTAAATGAAACCATAAGAGTCACCGAGGATGCTAAAAATGTAGCAATCAGAGAATATGAGCGGATCAAGGAAAATAACAGGAGTGAACTTGAAAGACTTGACAACGAGAGGCACGCTGACTTCTTGAACATGTTGAAGGGATTTGTGCATAATCAGGTGGGATACGCCGAAAAGATAGCAAATGTGTGGTCAAATGTTGCAGAGGAGACCAGTCCGTATGCGAAAGAGAGCCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0005794 GO:0005802 GO:0005829 GO:0006807 GO:0006810 GO:0006897 GO:0006996 GO:0007034 GO:0007275 GO:0008150 GO:0008152 GO:0008289 GO:0009791 GO:0009987 GO:0010008 GO:0010467 GO:0012505 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0019538 GO:0019898 GO:0030904 GO:0031090 GO:0031410 GO:0031902 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032585 GO:0032588 GO:0032991 GO:0035091 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043621 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045324 GO:0046907 GO:0046982 GO:0046983 GO:0048856 GO:0051179 GO:0051234 GO:0051604 GO:0051641 GO:0051649 GO:0071704 GO:0071840 GO:0090351 GO:0097708 GO:0098588 GO:0098657 GO:0098791 GO:0098796 GO:0098805 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

PX Vps5

Protein Analysis

588

Amino Acids

64.77

Weight (kDa)

5.95

Isoelectric Point (pI)

49.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PX	PF00787	196 - 276	4.3e-17	PX domain
Vps5	PF09325	349 - 577	5e-18	Vps5 C terminal like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07120 AT5G07120 AT5G07120 AT5G58440
fragaria_vesca	FvH4_3g39770
malus_domestica	MD03G1056600.v1.1 MD11G1058400.v1.1
prunus_persica	Prupe.6G048200_v2.0.a1
pyrus_communis	pycom11g04840
rosa_chinensis	RchiOBHm_Chr5g0071651
rosa_laevigata	RLG00000036238
rosa_multiflora	Rmu_sc0002060.1_g000020 Rmu_sc0005745.1_g000035 Rmu_sc0006567.1_g000005
rosa_roxburghii	Rroxscaffold_1G00009520
rosa_rugosa	Rorug05G0414000
rosa_samantha	Rh5BG489500 Rh5CG513300 Rh5DG500300
rosa_wichuraiana	Rw5G043660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	814
Acc36I	ACCTGC	1 cut(s)	814
AccB1I	GGYRCC	2 cut(s)	599, 934
AccBSI	CCGCTC	1 cut(s)	1588
AccII	CGCG	4 cut(s)	47, 257, 439, 509
AccIII	TCCGGA	1 cut(s)	574
AclWI	GGATC	4 cut(s)	75, 239, 595, 1598
AcsI	RAATTY	3 cut(s)	511, 593, 1205
AcuI	CTGAAG	1 cut(s)	331
AcyI	GRCGYC	2 cut(s)	866, 935
AdeI	CACNNNGTG	2 cut(s)	787, 946
AfaI	GTAC	8 cut(s)	107, 314, 332, 428, 464, 548, 656, 930
AfiI	CCNNNNNNNGG	6 cut(s)	292, 581, 609, 646, 962, 1043
AflIII	ACRYGT	1 cut(s)	1656
AgsI	TTSAA	9 cut(s)	91, 811, 991, 1000, 1469, 1475, 1619, 1654, 1663
AjiI	CACGTC	2 cut(s)	340, 622
AjnI	CCWGG	1 cut(s)	843
AloI	GAACNNNNNNTCC	4 cut(s)	8, 40, 1211, 1243
Alw21I	GWGCWC	3 cut(s)	410, 425, 1405
Alw26I	GTCTC	4 cut(s)	193, 484, 1157, 1727
AlwI	GGATC	4 cut(s)	75, 239, 595, 1598
Ama87I	CYCGRG	2 cut(s)	418, 1355
Aor13HI	TCCGGA	1 cut(s)	574
AoxI	GGCC	6 cut(s)	294, 342, 680, 1034, 1125, 1221
ApeKI	GCWGC	5 cut(s)	120, 362, 1250, 1277, 1444
ApoI	RAATTY	3 cut(s)	511, 593, 1205
ArsI	GACNNNNNNTTYG	2 cut(s)	1700, 1732
AspLEI	GCGC	6 cut(s)	49, 125, 232, 259, 509, 937
AspS9I	GGNCC	2 cut(s)	295, 637
AsuC2I	CCSGG	4 cut(s)	20, 399, 525, 604
AsuHPI	GGTGA	6 cut(s)	255, 637, 721, 901, 1508, 1540
AvaI	CYCGRG	2 cut(s)	418, 1355
AvaII	GGWCC	1 cut(s)	637
BaeGI	GKGCMC	1 cut(s)	604
BanI	GGYRCC	2 cut(s)	599, 934
BanII	GRGCYC	6 cut(s)	11, 26, 398, 410, 425, 1760
BauI	CACGAG	2 cut(s)	941, 1452
BbsI	GAAGAC	2 cut(s)	63, 441
Bbv12I	GWGCWC	3 cut(s)	410, 425, 1405
BbvCI	CCTCAGC	1 cut(s)	202
BbvI	GCAGC	5 cut(s)	132, 349, 1237, 1264, 1431
BccI	CCATC	1 cut(s)	875
BceAI	ACGGC	2 cut(s)	154, 400
BciT130I	CCWGG	1 cut(s)	845
BciVI	GTATCC	2 cut(s)	1330, 1682
BclI	TGATCA	2 cut(s)	552, 789
BcnI	CCSGG	4 cut(s)	20, 399, 525, 604
BcoDI	GTCTC	4 cut(s)	193, 484, 1157, 1727
BfaI	CTAG	4 cut(s)	288, 870, 1184, 1520
BfmI	CTRYAG	2 cut(s)	1008, 1278
BfoI	RGCGCY	3 cut(s)	126, 233, 938
BfuAI	ACCTGC	1 cut(s)	814
BfuI	GTATCC	2 cut(s)	1330, 1682
BglI	GCCNNNNNGGC	1 cut(s)	341
BlpI	GCTNAGC	1 cut(s)	1106
Bme1390I	CCNGG	5 cut(s)	20, 399, 525, 604, 845
Bme18I	GGWCC	1 cut(s)	637
BmeT110I	CYCGRG	2 cut(s)	418, 1355
BmgBI	CACGTC	2 cut(s)	340, 622
BmgT120I	GGNCC	2 cut(s)	295, 637
BmiI	GGNNCC	4 cut(s)	25, 297, 601, 936
BmrFI	CCNGG	5 cut(s)	20, 399, 525, 604, 845
BmrI	ACTGGG	2 cut(s)	779, 1030
BmsI	GCATC	6 cut(s)	349, 396, 702, 864, 1124, 1546
BmuI	ACTGGG	2 cut(s)	779, 1030
BpiI	GAAGAC	2 cut(s)	63, 441
BpmI	CTGGAG	1 cut(s)	1115
Bpu10I	CCTNAGC	2 cut(s)	202, 900
Bpu1102I	GCTNAGC	1 cut(s)	1106
BpuEI	CTTGAG	1 cut(s)	784
BpuMI	CCSGG	4 cut(s)	20, 399, 525, 604
BsaAI	YACGTR	2 cut(s)	312, 546
BsaHI	GRCGYC	2 cut(s)	866, 935
BsaI	GGTCTC	2 cut(s)	484, 1727
BsaJI	CCNNGG	5 cut(s)	19, 397, 677, 843, 1551
BsaWI	WCCGGW	1 cut(s)	574
BsaXI	ACNNNNNCTCC	4 cut(s)	8, 38, 1211, 1241
Bsc4I	CCNNNNNNNGG	6 cut(s)	292, 581, 609, 646, 962, 1043
Bse1I	ACTGG	4 cut(s)	785, 936, 1025, 1737
Bse3DI	GCAATG	1 cut(s)	1117
BseAI	TCCGGA	1 cut(s)	574
BseBI	CCWGG	1 cut(s)	845
BseDI	CCNNGG	5 cut(s)	19, 397, 677, 843, 1551
BseGI	GGATG	2 cut(s)	879, 1561
BseLI	CCNNNNNNNGG	6 cut(s)	292, 581, 609, 646, 962, 1043
BseMI	GCAATG	1 cut(s)	1117
BseMII	CTCAG	6 cut(s)	153, 216, 1120, 1133, 1250, 1401
BseNI	ACTGG	4 cut(s)	785, 936, 1025, 1737
BseRI	GAGGAG	5 cut(s)	166, 1064, 1232, 1538, 1745
BseSI	GKGCMC	1 cut(s)	604
BseXI	GCAGC	5 cut(s)	132, 349, 1237, 1264, 1431
BsgI	GTGCAG	2 cut(s)	848, 1436
Bsh1236I	CGCG	4 cut(s)	47, 257, 439, 509
Bsh1285I	CGRYCG	1 cut(s)	519
BshFI	GGCC	6 cut(s)	296, 344, 682, 1036, 1127, 1223
BshNI	GGYRCC	2 cut(s)	599, 934
BsiEI	CGRYCG	1 cut(s)	519
BsiHKAI	GWGCWC	3 cut(s)	410, 425, 1405
BsiHKCI	CYCGRG	2 cut(s)	418, 1355
BsiSI	CCGG	7 cut(s)	19, 27, 399, 524, 575, 604, 683
BsiWI	CGTACG	1 cut(s)	330
BslFI	GGGAC	1 cut(s)	632
BslI	CCNNNNNNNGG	6 cut(s)	292, 581, 609, 646, 962, 1043
BsmAI	GTCTC	4 cut(s)	193, 484, 1157, 1727
BsmBI	CGTCTC	2 cut(s)	193, 1157
BsmFI	GGGAC	1 cut(s)	632
BsmI	GAATGC	1 cut(s)	1382
BsnI	GGCC	6 cut(s)	296, 344, 682, 1036, 1127, 1223
Bso31I	GGTCTC	2 cut(s)	484, 1727
BsoBI	CYCGRG	2 cut(s)	418, 1355
Bsp1286I	GDGCHC	8 cut(s)	11, 26, 398, 410, 425, 604, 1405, 1760
Bsp13I	TCCGGA	1 cut(s)	574
Bsp143I	GATC	9 cut(s)	67, 244, 274, 440, 516, 552, 587, 789, 1590
Bsp1720I	GCTNAGC	1 cut(s)	1106
Bsp68I	TCGCGA	1 cut(s)	439
BspANI	GGCC	6 cut(s)	296, 344, 682, 1036, 1127, 1223
BspCNI	CTCAG	7 cut(s)	4, 152, 215, 1119, 1132, 1249, 1400
BspEI	TCCGGA	1 cut(s)	574
BspFNI	CGCG	4 cut(s)	47, 257, 439, 509
BspHI	TCATGA	1 cut(s)	1345
BspLI	GGNNCC	4 cut(s)	25, 297, 601, 936
BspMAI	CTGCAG	1 cut(s)	1282
BspMI	ACCTGC	1 cut(s)	814
BspPI	GGATC	4 cut(s)	75, 239, 595, 1598
BspT107I	GGYRCC	2 cut(s)	599, 934
BspTNI	GGTCTC	2 cut(s)	484, 1727
BsrBI	CCGCTC	1 cut(s)	1588
BsrDI	GCAATG	1 cut(s)	1117
BsrI	ACTGG	4 cut(s)	785, 936, 1025, 1737
BssECI	CCNNGG	5 cut(s)	19, 397, 677, 843, 1551
BssMI	GATC	9 cut(s)	67, 244, 274, 440, 516, 552, 587, 789, 1590
BssNI	GRCGYC	2 cut(s)	866, 935
BssSI	CACGAG	2 cut(s)	941, 1452
BssT1I	CCWWGG	1 cut(s)	677
Bst2BI	CACGAG	2 cut(s)	941, 1452
Bst2UI	CCWGG	1 cut(s)	845
Bst4CI	ACNGT	6 cut(s)	83, 267, 478, 1324, 1379, 1414
Bst6I	CTCTTC	3 cut(s)	460, 736, 1428
BstACI	GRCGYC	2 cut(s)	866, 935
BstAPI	GCANNNNNTGC	1 cut(s)	1277
BstBAI	YACGTR	2 cut(s)	312, 546
BstC8I	GCNNGC	7 cut(s)	234, 957, 1041, 1125, 1248, 1291, 1641
BstDEI	CTNAG	8 cut(s)	12, 139, 202, 900, 1106, 1119, 1236, 1387
BstENI	CCTNNNNNAGG	1 cut(s)	960
BstF5I	GGATG	2 cut(s)	879, 1561
BstFNI	CGCG	4 cut(s)	47, 257, 439, 509
BstH2I	RGCGCY	3 cut(s)	126, 233, 938
BstHHI	GCGC	6 cut(s)	49, 125, 232, 259, 509, 937
BstKTI	GATC	9 cut(s)	70, 247, 277, 443, 519, 555, 590, 792, 1593
BstMAI	GTCTC	4 cut(s)	193, 484, 1157, 1727
BstMBI	GATC	9 cut(s)	67, 244, 274, 440, 516, 552, 587, 789, 1590
BstMCI	CGRYCG	1 cut(s)	519
BstNI	CCWGG	1 cut(s)	845
BstNSI	RCATGY	1 cut(s)	1660
BstSCI	CCNGG	5 cut(s)	18, 397, 523, 602, 843
BstSFI	CTRYAG	2 cut(s)	1008, 1278
BstSLI	GKGCMC	1 cut(s)	604
BstUI	CGCG	4 cut(s)	47, 257, 439, 509
BstV1I	GCAGC	5 cut(s)	132, 349, 1237, 1264, 1431
BstV2I	GAAGAC	2 cut(s)	63, 441
BstX2I	RGATCY	1 cut(s)	67
BstXI	CCANNNNNNTGG	1 cut(s)	862
BstYI	RGATCY	1 cut(s)	67
BsuI	GTATCC	2 cut(s)	1330, 1682
BsuRI	GGCC	6 cut(s)	296, 344, 682, 1036, 1127, 1223
BtrI	CACGTC	2 cut(s)	340, 622
BtsCI	GGATG	2 cut(s)	879, 1561
BtsIMutI	CAGTG	3 cut(s)	792, 855, 1419
BtuMI	TCGCGA	1 cut(s)	439
BveI	ACCTGC	1 cut(s)	814
Cac8I	GCNNGC	7 cut(s)	234, 957, 1041, 1125, 1248, 1291, 1641
CciI	TCATGA	1 cut(s)	1345
CfoI	GCGC	6 cut(s)	49, 125, 232, 259, 509, 937
Cfr13I	GGNCC	2 cut(s)	295, 637
CpoI	CGGWCCG	1 cut(s)	637
CseI	GACGC	2 cut(s)	157, 855
Csp6I	GTAC	8 cut(s)	106, 313, 331, 427, 463, 547, 655, 929
CspI	CGGWCCG	1 cut(s)	637
CviAII	CATG	6 cut(s)	61, 127, 1156, 1258, 1346, 1657
CviQI	GTAC	8 cut(s)	106, 313, 331, 427, 463, 547, 655, 929
DdeI	CTNAG	8 cut(s)	12, 139, 202, 900, 1106, 1119, 1236, 1387
DinI	GGCGCC	1 cut(s)	936
DpnI	GATC	9 cut(s)	69, 246, 276, 442, 518, 554, 589, 791, 1592
DpnII	GATC	9 cut(s)	67, 244, 274, 440, 516, 552, 587, 789, 1590
DraIII	CACNNNGTG	2 cut(s)	787, 946
Eam1104I	CTCTTC	3 cut(s)	460, 736, 1428
EarI	CTCTTC	3 cut(s)	460, 736, 1428
EciI	GGCGGA	3 cut(s)	181, 199, 662
Ecl136II	GAGCTC	2 cut(s)	408, 423
Eco130I	CCWWGG	1 cut(s)	677
Eco147I	AGGCCT	1 cut(s)	1223
Eco24I	GRGCYC	6 cut(s)	11, 26, 398, 410, 425, 1760
Eco31I	GGTCTC	2 cut(s)	484, 1727
Eco47I	GGWCC	1 cut(s)	637
Eco53kI	GAGCTC	2 cut(s)	408, 423
Eco57I	CTGAAG	1 cut(s)	331
Eco88I	CYCGRG	2 cut(s)	418, 1355
EcoICRI	GAGCTC	2 cut(s)	408, 423
EcoNI	CCTNNNNNAGG	1 cut(s)	960
EcoRI	GAATTC	2 cut(s)	511, 593
EcoRII	CCWGG	1 cut(s)	843
EcoT14I	CCWWGG	1 cut(s)	677
EcoT22I	ATGCAT	1 cut(s)	1117
EcoT38I	GRGCYC	6 cut(s)	11, 26, 398, 410, 425, 1760
EgeI	GGCGCC	1 cut(s)	936
EheI	GGCGCC	1 cut(s)	936
ErhI	CCWWGG	1 cut(s)	677
Esp3I	CGTCTC	2 cut(s)	193, 1157
FaeI	CATG	6 cut(s)	64, 130, 1159, 1261, 1349, 1660
FaqI	GGGAC	1 cut(s)	632
FatI	CATG	6 cut(s)	60, 126, 1155, 1257, 1345, 1656
FauI	CCCGC	2 cut(s)	1036, 1239
FbaI	TGATCA	2 cut(s)	552, 789
FokI	GGATG	2 cut(s)	886, 1568
FriOI	GRGCYC	6 cut(s)	11, 26, 398, 410, 425, 1760
FspBI	CTAG	4 cut(s)	288, 870, 1184, 1520
GlaI	GCGC	6 cut(s)	48, 124, 231, 258, 508, 936
GsuI	CTGGAG	1 cut(s)	1115
HaeII	RGCGCY	3 cut(s)	126, 233, 938
HaeIII	GGCC	6 cut(s)	296, 344, 682, 1036, 1127, 1223
HapII	CCGG	7 cut(s)	19, 27, 399, 524, 575, 604, 683
HgaI	GACGC	2 cut(s)	157, 855
HhaI	GCGC	6 cut(s)	49, 125, 232, 259, 509, 937
Hin1I	GRCGYC	2 cut(s)	866, 935
Hin1II	CATG	6 cut(s)	64, 130, 1159, 1261, 1349, 1660
Hin6I	GCGC	6 cut(s)	47, 123, 230, 257, 507, 935
HinP1I	GCGC	6 cut(s)	47, 123, 230, 257, 507, 935
HincII	GTYRAC	2 cut(s)	1375, 1410
HindII	GTYRAC	2 cut(s)	1375, 1410
HindIII	AAGCTT	2 cut(s)	836, 893
HpaII	CCGG	7 cut(s)	19, 27, 399, 524, 575, 604, 683
HphI	GGTGA	6 cut(s)	255, 637, 721, 901, 1508, 1540
Hpy166II	GTNNAC	3 cut(s)	1375, 1410, 1613
Hpy8I	GTNNAC	3 cut(s)	1375, 1410, 1613
Hpy99I	CGWCG	6 cut(s)	136, 151, 166, 169, 341, 806
HpyAV	CCTTC	7 cut(s)	336, 355, 364, 487, 497, 805, 1657
HpyCH4III	ACNGT	6 cut(s)	83, 267, 478, 1324, 1379, 1414
HpyCH4IV	ACGT	7 cut(s)	311, 339, 540, 545, 621, 629, 1166
HpyF3I	CTNAG	8 cut(s)	12, 139, 202, 900, 1106, 1119, 1236, 1387
HpySE526I	ACGT	7 cut(s)	311, 339, 540, 545, 621, 629, 1166
Hsp92I	GRCGYC	2 cut(s)	866, 935
Hsp92II	CATG	6 cut(s)	64, 130, 1159, 1261, 1349, 1660
HspAI	GCGC	6 cut(s)	47, 123, 230, 257, 507, 935
KasI	GGCGCC	1 cut(s)	934
Kpn2I	TCCGGA	1 cut(s)	574
Ksp22I	TGATCA	2 cut(s)	552, 789
Kzo9I	GATC	9 cut(s)	67, 244, 274, 440, 516, 552, 587, 789, 1590
LmnI	GCTCC	7 cut(s)	29, 413, 496, 527, 733, 1025, 1096
Lsp1109I	GCAGC	5 cut(s)	132, 349, 1237, 1264, 1431
LweI	GCATC	6 cut(s)	349, 396, 702, 864, 1124, 1546
MaeI	CTAG	4 cut(s)	288, 870, 1184, 1520
MaeII	ACGT	7 cut(s)	311, 339, 540, 545, 621, 629, 1166
MaeIII	GTNAC	4 cut(s)	541, 625, 1496, 1546
MalI	GATC	9 cut(s)	69, 246, 276, 442, 518, 554, 589, 791, 1592
MbiI	CCGCTC	1 cut(s)	1588
MboI	GATC	9 cut(s)	67, 244, 274, 440, 516, 552, 587, 789, 1590
MboII	GAAGA	7 cut(s)	68, 441, 447, 753, 1093, 1273, 1415
MfeI	CAATTG	1 cut(s)	86
MflI	RGATCY	1 cut(s)	67
MhlI	GDGCHC	8 cut(s)	11, 26, 398, 410, 425, 604, 1405, 1760
MluCI	AATT	7 cut(s)	86, 112, 511, 593, 806, 1205, 1433
Mly113I	GGCGCC	1 cut(s)	935
MlyI	GAGTC	6 cut(s)	233, 553, 659, 712, 1414, 1554
MmeI	TCCRAC	1 cut(s)	435
Mph1103I	ATGCAT	1 cut(s)	1117
MroI	TCCGGA	1 cut(s)	574
MseI	TTAA	5 cut(s)	851, 1140, 1194, 1310, 1529
MslI	CAYNNNNRTG	1 cut(s)	860
MspA1I	CMGCKG	1 cut(s)	1039
MspI	CCGG	7 cut(s)	19, 27, 399, 524, 575, 604, 683
MspR9I	CCNGG	5 cut(s)	20, 399, 525, 604, 845
MunI	CAATTG	1 cut(s)	86
Mva1269I	GAATGC	1 cut(s)	1382
MvaI	CCWGG	1 cut(s)	845
MvnI	CGCG	4 cut(s)	47, 257, 439, 509
NarI	GGCGCC	1 cut(s)	935
NciI	CCSGG	4 cut(s)	20, 399, 525, 604
NdeII	GATC	9 cut(s)	67, 244, 274, 440, 516, 552, 587, 789, 1590
NlaIII	CATG	6 cut(s)	64, 130, 1159, 1261, 1349, 1660
NlaIV	GGNNCC	4 cut(s)	25, 297, 601, 936
NmeAIII	GCCGAG	1 cut(s)	272
NmuCI	GTSAC	4 cut(s)	541, 625, 1496, 1546
NruI	TCGCGA	1 cut(s)	439
NsiI	ATGCAT	1 cut(s)	1117
NspI	RCATGY	1 cut(s)	1660
PaeR7I	CTCGAG	1 cut(s)	418
PagI	TCATGA	1 cut(s)	1345
PaqCI	CACCTGC	1 cut(s)	814
PceI	AGGCCT	1 cut(s)	1223
PciI	ACATGT	1 cut(s)	1656
PcsI	WCGNNNNNNNCGW	3 cut(s)	167, 277, 443
PctI	GAATGC	1 cut(s)	1382
PfeI	GAWTC	4 cut(s)	484, 1130, 1296, 1510
Pfl23II	CGTACG	1 cut(s)	330
PfoI	TCCNGGA	1 cut(s)	523
Ple19I	CGATCG	1 cut(s)	519
PleI	GAGTC	6 cut(s)	233, 553, 658, 711, 1414, 1553
PluTI	GGCGCC	1 cut(s)	938
PpsI	GAGTC	6 cut(s)	233, 553, 658, 711, 1414, 1553
Ppu21I	YACGTR	2 cut(s)	312, 546
PscI	ACATGT	1 cut(s)	1656
Psp124BI	GAGCTC	2 cut(s)	410, 425
Psp6I	CCWGG	1 cut(s)	843
PspGI	CCWGG	1 cut(s)	843
PspLI	CGTACG	1 cut(s)	330
PspN4I	GGNNCC	4 cut(s)	25, 297, 601, 936
PspPI	GGNCC	2 cut(s)	295, 637
PspXI	VCTCGAGB	1 cut(s)	418
PstI	CTGCAG	1 cut(s)	1282
PsuI	RGATCY	1 cut(s)	67
PvuI	CGATCG	1 cut(s)	519
RruI	TCGCGA	1 cut(s)	439
RsaI	GTAC	8 cut(s)	107, 314, 332, 428, 464, 548, 656, 930
RsaNI	GTAC	8 cut(s)	106, 313, 331, 427, 463, 547, 655, 929
RseI	CAYNNNNRTG	1 cut(s)	860
Rsr2I	CGGWCCG	1 cut(s)	637
RsrII	CGGWCCG	1 cut(s)	637
SacI	GAGCTC	2 cut(s)	410, 425
SaqAI	TTAA	5 cut(s)	851, 1140, 1194, 1310, 1529
Sau3AI	GATC	9 cut(s)	67, 244, 274, 440, 516, 552, 587, 789, 1590
Sau96I	GGNCC	2 cut(s)	295, 637
SchI	GAGTC	6 cut(s)	233, 553, 659, 712, 1414, 1554
ScrFI	CCNGG	5 cut(s)	20, 399, 525, 604, 845
SduI	GDGCHC	8 cut(s)	11, 26, 398, 410, 425, 604, 1405, 1760
SfaNI	GCATC	6 cut(s)	349, 396, 702, 864, 1124, 1546
SfcI	CTRYAG	2 cut(s)	1008, 1278
SfoI	GGCGCC	1 cut(s)	936
Sfr274I	CTCGAG	1 cut(s)	418
SinI	GGWCC	1 cut(s)	637
SlaI	CTCGAG	1 cut(s)	418
SmiMI	CAYNNNNRTG	1 cut(s)	860
SmlI	CTYRAG	2 cut(s)	418, 763
SmoI	CTYRAG	2 cut(s)	418, 763
Sse9I	AATT	7 cut(s)	86, 112, 511, 593, 806, 1205, 1433
SseBI	AGGCCT	1 cut(s)	1223
SspDI	GGCGCC	1 cut(s)	934
SspI	AATATT	1 cut(s)	1488
SspMI	CTAG	4 cut(s)	288, 870, 1184, 1520
SstI	GAGCTC	2 cut(s)	410, 425
StuI	AGGCCT	1 cut(s)	1223
StyD4I	CCNGG	5 cut(s)	18, 397, 523, 602, 843
StyI	CCWWGG	1 cut(s)	677
TaaI	ACNGT	6 cut(s)	83, 267, 478, 1324, 1379, 1414
TaiI	ACGT	7 cut(s)	314, 342, 543, 548, 624, 632, 1169
TaqI	TCGA	8 cut(s)	110, 318, 357, 390, 419, 482, 515, 1031
TaqII	GACCGA	1 cut(s)	654
TasI	AATT	7 cut(s)	86, 112, 511, 593, 806, 1205, 1433
TauI	GCSGC	7 cut(s)	197, 200, 224, 374, 610, 969, 1039
TfiI	GAWTC	4 cut(s)	484, 1130, 1296, 1510
Tru1I	TTAA	5 cut(s)	851, 1140, 1194, 1310, 1529
Tru9I	TTAA	5 cut(s)	851, 1140, 1194, 1310, 1529
TscAI	CASTG	3 cut(s)	792, 862, 1419
TseFI	GTSAC	4 cut(s)	541, 625, 1496, 1546
TseI	GCWGC	5 cut(s)	120, 362, 1250, 1277, 1444
Tsp45I	GTSAC	4 cut(s)	541, 625, 1496, 1546
TspDTI	ATGAA	5 cut(s)	1100, 1274, 1334, 1362, 1548
TspGWI	ACGGA	2 cut(s)	435, 1731
TspRI	CASTG	3 cut(s)	792, 862, 1419
VpaK11BI	GGWCC	1 cut(s)	637
XagI	CCTNNNNNAGG	1 cut(s)	960
XapI	RAATTY	3 cut(s)	511, 593, 1205
XceI	RCATGY	1 cut(s)	1660
XhoI	CTCGAG	1 cut(s)	418
XspI	CTAG	4 cut(s)	288, 870, 1184, 1520
Zsp2I	ATGCAT	1 cut(s)	1117

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.