Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004827

Physical Location & Seq

Genomic Coordinates Reverse (-)

3662634 .. 3668214

Gene Structure 5581 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G11470.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2136 bp

ATGGAAGAATCTGTAGCATCTGAAGGCTTAGAATTTAAGTGGGGTAAAAAGAAAGGTGTTGGTGGGAAAAAGAAAGATGTCCAGTTCTATGAATCTTTCACCTATGATGGCGATGAATACCGTCTTTATGACTGTGTCTTAGTTGGCAATGCCAGTGAACCAGACTCTACTGAACCCTTCATTGGCATGATCATAAAAATTTGGGAACACGCTAATAAGCATATCCCAAAGAAAGTCAAGCTTCTCTGGTTCTTTAAACCTTCTGAGATTGCGCCATATCTTGAAGGAGTCCCGAATGTACTTGCCAATGAAGTGTTTTTAGCATCGGGTGAAGGTCTTGGCCTTGCTAATACCAACCAATTGGAAGCAATCGGTGGAAAATGCTCTGTTCTATGCATTTCAAAAGACAAAAGAAATCCACAACCCTCGGATGAAAAATTCAACTCAGCGGACTTCGTGTTTTGCCGAGCATTTGATGTTGGAAGTTGCAAAGTTGTGGATACGATTGATGATAAGATTGCTGGAGTTGACGTTAAATTTATCTTTAACAGAGCGTGCTCTGAGAAAGAAGCAACTGCGGTGCAGAATATTGAAGCAGACGTAAATGGGAAGTCAGATAGTTTGAAACCAAATGGTCCTTTAGCTAGGGGAGCTAGTGGTTCAGTTAGGAAAATCGAAGACAGCGCTTTTGAATCTTCTGACTGTAAAGAAAACAGTAATGGTTGCAAAGAAGAGAAAGAAAAAGGTCACTACCAACTCGCTATAAAAAAATCTACACTTGCAGAAGAAAGGTCTAACAAGGATTCTGGCTCTAGGGGAAATCATTATAATGGCAAAGATCAAGAAAGTGAAGTTAAAAAACAGTTAACTAAACAAAAATCTATGCCTGGCGAAGAAAGATATAGTAACTCTTTTGAAGCTTCTGGCTCCAGGACAATTCATTCCATTTCAAAGAAAGCTCAAGAAAATGATGTTAAAAAGCAGTTGACTAAACAAAAATCTATGCCCGCTGGAGAAAGATATAGTCAAGAGTCGAGTGGATTGGATGACAGGCCTCTGAAGAAACAGAAACTTGATGGTTCTGTTACAGTACGAGATGGATGGGATACAACCATTTTGCAGAACATTACTTCTGATGGTAAAAAGGATACAGGATCTTTTAAGAGACCTAGAGACAAAGTGACTATAGAGGAAGTCCCTCCCGAAAAGCGCAGCTTTGTTAAGAACCGAGATCTTGTAGTGTCAGTATCTGAAGGAAAAACTACAAAAACTGTAACTGAAAAAGGTATATCCAAGAAGCCCAGCTTTGGACGTGCTGAGGACAAGATGTCGGCAGATGATAATGAAAGAAACTATCAAGTAACTGAAGTGTGCCGAAGGCCGGATGCTGGAAAAAGTAAATGGTTCCGGAGTCTTCCTTGGGAAGAAAGTATGAGGGAAGCAGAAAAAAAAGGGACTGTGGTACTTCTTCAAAACTTGGATCCTACTTATACATCTGATGAAGTGGAGGATATAGTCTATTCTGCTTTGAACCAGCAATGCGAAGCGAGGATGATAGAGCGTACATCAGTCACTATTCCTCATATTGGTGAAGCTTTGGTCATTTTCAAAACAAGAGAAGTTGCAGAAAGGGTGATTAGAAGACTAGATGAGGGATGCTTGTTGCTATCAAGTGGGAGGCCCCTTGTTGCTTCTTTCGCTAAGATTACTCCACCAGGGAAGCCGTCATTATTCTCAGGCCATATCAAACTACACAAAACTCAAACGCGACGGGAGATGAGAGATGCCGTGGCTACATCACATTCTTCTCAGCCTAACAACCTTGAATTTGACATGGCCATGGAATGGTGTTTGCACCAAGCCAGACACGAGCAGGCGTCTGAAAGTGTATCTAAGCGGCAATTGGAGGAGATGAAGTCGCTGCGGATTAACTTCAAGCTGAAACTTCCTTATGAGACTCAAGAATTTTGGTTTCATGCCATCCAGTCCCCCAACTTTGACTCGGAGGAATATACTGATGCGGCTTCTGGTCTCAAATCGGACGACCCTTTTGTAGTTACATATTTTTTTGTAAGGGTCAGTTTCACTAGTGAAGTGCTAAACTTTTGTGTGGATCAGGAAAGGTCAAGAGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010628 GO:0010639 GO:0019219 GO:0019222 GO:0031056 GO:0031060 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031935 GO:0031936 GO:0032268 GO:0033043 GO:0033044 GO:0040029 GO:0044030 GO:0045815 GO:0045893 GO:0045934 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051252 GO:0051254 GO:0051570 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0080090 GO:0097159 GO:1901363 GO:1902275 GO:1902680 GO:1903506 GO:1903508 GO:1905268 GO:1905642 GO:2000112 GO:2001141 GO:2001251

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BAH

Protein Analysis

711

Amino Acids

79.98

Weight (kDa)

6.69

Isoelectric Point (pI)

43.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BAH	PF01426	39 - 154	4.8e-10	BAH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004827)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11470 AT5G11470
fragaria_vesca	FvH4_2g36260 FvH4_2g36260 FvH4_2g36260 FvH4_2g36260 FvH4_2g36260 FvH4_2g36260 FvH4_2g36260 FvH4_2g36260 FvH4_2g36260 FvH4_2g36260 FvH4_2g36260 FvH4_2g36260 FvH4_2g36260 FvH4_2g36260
malus_domestica	MD08G1120100.v1.1 MD15G1099300.v1.1
prunus_persica	Prupe.1G454000_v2.0.a1
pyrus_communis	pycom08g10040 pycom15g09130
rosa_chinensis	RchiOBHm_Chr6g0305631
rosa_laevigata	RLG00000010871
rosa_multiflora	Rmu_sc0001809.1_g000016
rosa_roxburghii	Rroxscaffold_7G00162510
rosa_rugosa	Rorug06G0342300
rosa_samantha	Rh6AG454200 Rh6BG447300 Rh6CG467900 Rh6DG454500
rosa_wichuraiana	Rw6G039600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	828
AccB7I	CCANNNNNTGG	1 cut(s)	1845
AccII	CGCG	1 cut(s)	1768
AccIII	TCCGGA	1 cut(s)	1407
AciI	CCGC	6 cut(s)	449, 578, 1008, 1897, 1924, 2021
AclWI	GGATC	4 cut(s)	1162, 1475, 1488, 2121
AcoI	YGGCCR	1 cut(s)	1836
AcsI	RAATTY	6 cut(s)	32, 198, 437, 536, 1826, 1964
AcuI	CTGAAG	4 cut(s)	42, 1079, 1272, 1386
AcyI	GRCGYC	1 cut(s)	1877
AfaI	GTAC	4 cut(s)	300, 1092, 1464, 1564
AfeI	AGCGCT	1 cut(s)	685
AfiI	CCNNNNNNNGG	6 cut(s)	182, 1307, 1381, 1388, 1586, 1845
AhdI	GACNNNNNGTC	1 cut(s)	1327
AhlI	ACTAGT	1 cut(s)	2087
AjiI	CACGTC	1 cut(s)	1313
AjnI	CCWGG	3 cut(s)	886, 929, 1714
AjuI	GAANNNNNNNTTGG	2 cut(s)	165, 197
AluBI	AGCT	9 cut(s)	241, 644, 653, 920, 959, 1215, 1305, 1595, 1939
AluI	AGCT	9 cut(s)	241, 644, 653, 920, 959, 1215, 1305, 1595, 1939
Alw21I	GWGCWC	1 cut(s)	560
Alw26I	GTCTC	4 cut(s)	1159, 1167, 1949, 2036
AlwI	GGATC	4 cut(s)	1162, 1475, 1488, 2121
AlwNI	CAGNNNCTG	1 cut(s)	1250
Aor13HI	TCCGGA	1 cut(s)	1407
Aor51HI	AGCGCT	1 cut(s)	685
AoxI	GGCC	6 cut(s)	340, 1052, 1379, 1679, 1738, 1836
ApeKI	GCWGC	2 cut(s)	1212, 1921
ApoI	RAATTY	6 cut(s)	32, 198, 437, 536, 1826, 1964
ArsI	GACNNNNNNTTYG	4 cut(s)	671, 703, 2033, 2065
AspLEI	GCGC	3 cut(s)	274, 686, 1212
AspS9I	GGNCC	2 cut(s)	635, 1680
AsuHPI	GGTGA	4 cut(s)	91, 341, 1601, 1645
AvaII	GGWCC	1 cut(s)	635
BalI	TGGCCA	1 cut(s)	1838
BamHI	GGATCC	1 cut(s)	1480
BauI	CACGAG	1 cut(s)	1868
BbsI	GAAGAC	3 cut(s)	684, 1406, 1648
Bbv12I	GWGCWC	1 cut(s)	560
BbvCI	CCTCAGC	1 cut(s)	1317
BbvI	GCAGC	2 cut(s)	1224, 1908
BccI	CCATC	6 cut(s)	101, 1070, 1091, 1095, 1130, 1988
BceAI	ACGGC	2 cut(s)	1708, 1772
BciT130I	CCWGG	3 cut(s)	888, 931, 1716
BciVI	GTATCC	3 cut(s)	493, 1099, 1141
BclI	TGATCA	1 cut(s)	189
BcoDI	GTCTC	4 cut(s)	1159, 1167, 1949, 2036
BcuI	ACTAGT	1 cut(s)	2087
BfaI	CTAG	6 cut(s)	645, 654, 813, 1170, 1646, 2088
BfmI	CTRYAG	2 cut(s)	12, 1185
BfoI	RGCGCY	1 cut(s)	687
BfuI	GTATCC	3 cut(s)	493, 1099, 1141
BglII	AGATCT	1 cut(s)	1231
BisI	GCNGC	4 cut(s)	1213, 1898, 1922, 2022
BlsI	GCNGC	4 cut(s)	1214, 1899, 1923, 2023
Bme1390I	CCNGG	3 cut(s)	888, 931, 1716
Bme18I	GGWCC	1 cut(s)	635
BmeRI	GACNNNNNGTC	1 cut(s)	1327
BmgBI	CACGTC	1 cut(s)	1313
BmgT120I	GGNCC	2 cut(s)	635, 1680
BmiI	GGNNCC	4 cut(s)	928, 1406, 1482, 1682
BmrFI	CCNGG	3 cut(s)	888, 931, 1716
BmsI	GCATC	6 cut(s)	26, 332, 1375, 1646, 1774, 2008
BpiI	GAAGAC	3 cut(s)	684, 1406, 1648
BpmI	CTGGAG	3 cut(s)	543, 913, 1032
Bpu10I	CCTNAGC	1 cut(s)	1317
BpuEI	CTTGAG	2 cut(s)	945, 1944
BsaHI	GRCGYC	1 cut(s)	1877
BsaI	GGTCTC	2 cut(s)	1159, 2036
BsaJI	CCNNGG	5 cut(s)	426, 1418, 1715, 1788, 1839
BsaWI	WCCGGW	1 cut(s)	1407
BsaXI	ACNNNNNCTCC	4 cut(s)	516, 546, 1901, 1931
Bsc4I	CCNNNNNNNGG	6 cut(s)	182, 1307, 1381, 1388, 1586, 1845
Bse1I	ACTGG	3 cut(s)	82, 153, 1984
Bse3DI	GCAATG	2 cut(s)	154, 1544
BseAI	TCCGGA	1 cut(s)	1407
BseBI	CCWGG	3 cut(s)	888, 931, 1716
BseDI	CCNNGG	5 cut(s)	426, 1418, 1715, 1788, 1839
BseGI	GGATG	7 cut(s)	436, 1051, 1106, 1390, 1557, 1661, 1980
BseLI	CCNNNNNNNGG	6 cut(s)	182, 1307, 1381, 1388, 1586, 1845
BseMI	GCAATG	2 cut(s)	154, 1544
BseMII	CTCAG	6 cut(s)	255, 459, 552, 1308, 1749, 1823
BseNI	ACTGG	3 cut(s)	82, 153, 1984
BseRI	GAGGAG	1 cut(s)	1922
BseXI	GCAGC	2 cut(s)	1224, 1908
BseYI	CCCAGC	1 cut(s)	1301
BsgI	GTGCAG	1 cut(s)	602
Bsh1236I	CGCG	1 cut(s)	1768
BshFI	GGCC	6 cut(s)	342, 1054, 1381, 1681, 1740, 1838
BsiHKAI	GWGCWC	1 cut(s)	560
BsiSI	CCGG	2 cut(s)	1382, 1408
BslFI	GGGAC	4 cut(s)	275, 1181, 1468, 1972
BslI	CCNNNNNNNGG	6 cut(s)	182, 1307, 1381, 1388, 1586, 1845
BsmAI	GTCTC	4 cut(s)	1159, 1167, 1949, 2036
BsmFI	GGGAC	4 cut(s)	275, 1181, 1468, 1972
BsnI	GGCC	6 cut(s)	342, 1054, 1381, 1681, 1740, 1838
Bso31I	GGTCTC	2 cut(s)	1159, 2036
Bsp1286I	GDGCHC	1 cut(s)	560
Bsp13I	TCCGGA	1 cut(s)	1407
Bsp143I	GATC	6 cut(s)	189, 838, 1154, 1231, 1480, 2113
Bsp19I	CCATGG	1 cut(s)	1839
BspACI	CCGC	6 cut(s)	449, 578, 1008, 1897, 1924, 2021
BspANI	GGCC	6 cut(s)	342, 1054, 1381, 1681, 1740, 1838
BspCNI	CTCAG	6 cut(s)	256, 458, 553, 1309, 1748, 1822
BspEI	TCCGGA	1 cut(s)	1407
BspFNI	CGCG	1 cut(s)	1768
BspLI	GGNNCC	4 cut(s)	928, 1406, 1482, 1682
BspPI	GGATC	4 cut(s)	1162, 1475, 1488, 2121
BspTNI	GGTCTC	2 cut(s)	1159, 2036
BsrDI	GCAATG	2 cut(s)	154, 1544
BsrI	ACTGG	3 cut(s)	82, 153, 1984
BssECI	CCNNGG	5 cut(s)	426, 1418, 1715, 1788, 1839
BssMI	GATC	6 cut(s)	189, 838, 1154, 1231, 1480, 2113
BssNI	GRCGYC	1 cut(s)	1877
BssSI	CACGAG	1 cut(s)	1868
BssT1I	CCWWGG	2 cut(s)	1418, 1839
Bst2BI	CACGAG	1 cut(s)	1868
Bst2UI	CCWGG	3 cut(s)	888, 931, 1716
Bst4CI	ACNGT	8 cut(s)	122, 134, 704, 716, 864, 1090, 1273, 1459
Bst6I	CTCTTC	1 cut(s)	726
BstACI	GRCGYC	1 cut(s)	1877
BstC8I	GCNNGC	3 cut(s)	556, 1008, 1875
BstDSI	CCRYGG	2 cut(s)	1788, 1839
BstF5I	GGATG	7 cut(s)	436, 1051, 1106, 1390, 1557, 1661, 1980
BstFNI	CGCG	1 cut(s)	1768
BstH2I	RGCGCY	1 cut(s)	687
BstHHI	GCGC	3 cut(s)	274, 686, 1212
BstKTI	GATC	6 cut(s)	192, 841, 1157, 1234, 1483, 2116
BstMAI	GTCTC	4 cut(s)	1159, 1167, 1949, 2036
BstMBI	GATC	6 cut(s)	189, 838, 1154, 1231, 1480, 2113
BstMWI	GCNNNNNNNGC	2 cut(s)	650, 1697
BstNI	CCWGG	3 cut(s)	888, 931, 1716
BstSCI	CCNGG	3 cut(s)	886, 929, 1714
BstSFI	CTRYAG	2 cut(s)	12, 1185
BstUI	CGCG	1 cut(s)	1768
BstV1I	GCAGC	2 cut(s)	1224, 1908
BstV2I	GAAGAC	3 cut(s)	684, 1406, 1648
BstX2I	RGATCY	3 cut(s)	1154, 1231, 1480
BstXI	CCANNNNNNTGG	1 cut(s)	361
BstYI	RGATCY	3 cut(s)	1154, 1231, 1480
BsuI	GTATCC	3 cut(s)	493, 1099, 1141
BsuRI	GGCC	6 cut(s)	342, 1054, 1381, 1681, 1740, 1838
BtgI	CCRYGG	2 cut(s)	1788, 1839
BtgZI	GCGATG	1 cut(s)	126
BtrI	CACGTC	1 cut(s)	1313
BtsCI	GGATG	7 cut(s)	436, 1051, 1106, 1390, 1557, 1661, 1980
BtsIMutI	CAGTG	1 cut(s)	160
Cac8I	GCNNGC	3 cut(s)	556, 1008, 1875
CaiI	CAGNNNCTG	1 cut(s)	1250
CfoI	GCGC	3 cut(s)	274, 686, 1212
Cfr13I	GGNCC	2 cut(s)	635, 1680
CseI	GACGC	1 cut(s)	1866
Csp6I	GTAC	4 cut(s)	299, 1091, 1463, 1563
CviAII	CATG	4 cut(s)	187, 1834, 1840, 1976
CviQI	GTAC	4 cut(s)	299, 1091, 1463, 1563
DpnI	GATC	6 cut(s)	191, 840, 1156, 1233, 1482, 2115
DpnII	GATC	6 cut(s)	189, 838, 1154, 1231, 1480, 2113
DraI	TTTAAA	1 cut(s)	256
DriI	GACNNNNNGTC	1 cut(s)	1327
EaeI	YGGCCR	1 cut(s)	1836
Eam1104I	CTCTTC	1 cut(s)	726
Eam1105I	GACNNNNNGTC	1 cut(s)	1327
EarI	CTCTTC	1 cut(s)	726
Eco130I	CCWWGG	2 cut(s)	1418, 1839
Eco147I	AGGCCT	1 cut(s)	1054
Eco31I	GGTCTC	2 cut(s)	1159, 2036
Eco47I	GGWCC	1 cut(s)	635
Eco47III	AGCGCT	1 cut(s)	685
Eco57I	CTGAAG	4 cut(s)	42, 1079, 1272, 1386
EcoO109I	RGGNCCY	1 cut(s)	1680
EcoRII	CCWGG	3 cut(s)	886, 929, 1714
EcoT14I	CCWWGG	2 cut(s)	1418, 1839
EcoT22I	ATGCAT	1 cut(s)	398
ErhI	CCWWGG	2 cut(s)	1418, 1839
FaeI	CATG	4 cut(s)	190, 1837, 1843, 1979
FalI	AAGNNNNNCTT	6 cut(s)	225, 257, 1199, 1231, 1289, 1321
FaqI	GGGAC	4 cut(s)	275, 1181, 1468, 1972
FatI	CATG	4 cut(s)	186, 1833, 1839, 1975
FauI	CCCGC	1 cut(s)	1015
FbaI	TGATCA	1 cut(s)	189
Fnu4HI	GCNGC	4 cut(s)	1213, 1898, 1922, 2022
FokI	GGATG	7 cut(s)	443, 1058, 1113, 1397, 1564, 1668, 1967
Fsp4HI	GCNGC	4 cut(s)	1213, 1898, 1922, 2022
FspBI	CTAG	6 cut(s)	645, 654, 813, 1170, 1646, 2088
GlaI	GCGC	3 cut(s)	273, 685, 1211
GluI	GCNGC	4 cut(s)	1213, 1898, 1922, 2022
GsaI	CCCAGC	1 cut(s)	1305
GsuI	CTGGAG	3 cut(s)	543, 913, 1032
HaeII	RGCGCY	1 cut(s)	687
HaeIII	GGCC	6 cut(s)	342, 1054, 1381, 1681, 1740, 1838
HapII	CCGG	2 cut(s)	1382, 1408
HgaI	GACGC	1 cut(s)	1866
HhaI	GCGC	3 cut(s)	274, 686, 1212
Hin1I	GRCGYC	1 cut(s)	1877
Hin1II	CATG	4 cut(s)	190, 1837, 1843, 1979
Hin6I	GCGC	3 cut(s)	272, 684, 1210
HinP1I	GCGC	3 cut(s)	272, 684, 1210
HincII	GTYRAC	3 cut(s)	529, 867, 987
HindII	GTYRAC	3 cut(s)	529, 867, 987
HindIII	AAGCTT	3 cut(s)	239, 918, 1593
HpaI	GTTAAC	1 cut(s)	867
HpaII	CCGG	2 cut(s)	1382, 1408
HphI	GGTGA	4 cut(s)	91, 341, 1601, 1645
Hpy166II	GTNNAC	4 cut(s)	158, 529, 867, 987
Hpy8I	GTNNAC	4 cut(s)	158, 529, 867, 987
Hpy99I	CGWCG	1 cut(s)	1773
HpyAV	CCTTC	7 cut(s)	17, 187, 270, 278, 326, 1247, 1371
HpyCH4III	ACNGT	8 cut(s)	122, 134, 704, 716, 864, 1090, 1273, 1459
HpyCH4IV	ACGT	3 cut(s)	531, 600, 1312
HpyCH4V	TGCA	8 cut(s)	396, 489, 583, 726, 782, 1120, 1625, 1855
HpyF10VI	GCNNNNNNNGC	2 cut(s)	650, 1697
HpySE526I	ACGT	3 cut(s)	531, 600, 1312
Hsp92I	GRCGYC	1 cut(s)	1877
Hsp92II	CATG	4 cut(s)	190, 1837, 1843, 1979
HspAI	GCGC	3 cut(s)	272, 684, 1210
Kpn2I	TCCGGA	1 cut(s)	1407
Ksp22I	TGATCA	1 cut(s)	189
KspAI	GTTAAC	1 cut(s)	867
Kzo9I	GATC	6 cut(s)	189, 838, 1154, 1231, 1480, 2113
LmnI	GCTCC	2 cut(s)	650, 932
Lsp1109I	GCAGC	2 cut(s)	1224, 1908
LweI	GCATC	6 cut(s)	26, 332, 1375, 1646, 1774, 2008
MaeI	CTAG	6 cut(s)	645, 654, 813, 1170, 1646, 2088
MaeII	ACGT	3 cut(s)	531, 600, 1312
MaeIII	GTNAC	8 cut(s)	746, 905, 1084, 1180, 1273, 1360, 1570, 2056
MalI	GATC	6 cut(s)	191, 840, 1156, 1233, 1482, 2115
MboI	GATC	6 cut(s)	189, 838, 1154, 1231, 1480, 2113
MfeI	CAATTG	2 cut(s)	359, 1901
MflI	RGATCY	3 cut(s)	1154, 1231, 1480
MhlI	GDGCHC	1 cut(s)	560
MlsI	TGGCCA	1 cut(s)	1838
MluCI	AATT	9 cut(s)	32, 198, 359, 437, 536, 936, 1826, 1901, 1964
MluNI	TGGCCA	1 cut(s)	1838
MlyI	GAGTC	6 cut(s)	158, 297, 1040, 1420, 1951, 1994
MmeI	TCCRAC	1 cut(s)	460
Mox20I	TGGCCA	1 cut(s)	1838
Mph1103I	ATGCAT	1 cut(s)	398
MroI	TCCGGA	1 cut(s)	1407
MscI	TGGCCA	1 cut(s)	1838
MslI	CAYNNNNRTG	4 cut(s)	185, 828, 1587, 1838
Msp20I	TGGCCA	1 cut(s)	1838
MspA1I	CMGCKG	2 cut(s)	449, 1010
MspI	CCGG	2 cut(s)	1382, 1408
MspR9I	CCNGG	3 cut(s)	888, 931, 1716
MunI	CAATTG	2 cut(s)	359, 1901
MvaI	CCWGG	3 cut(s)	888, 931, 1716
MvnI	CGCG	1 cut(s)	1768
MwoI	GCNNNNNNNGC	2 cut(s)	650, 1697
NcoI	CCATGG	1 cut(s)	1839
NdeII	GATC	6 cut(s)	189, 838, 1154, 1231, 1480, 2113
NlaIII	CATG	4 cut(s)	190, 1837, 1843, 1979
NlaIV	GGNNCC	4 cut(s)	928, 1406, 1482, 1682
NmeAIII	GCCGAG	1 cut(s)	491
NmuCI	GTSAC	3 cut(s)	746, 1180, 1570
NsiI	ATGCAT	1 cut(s)	398
PceI	AGGCCT	1 cut(s)	1054
PfeI	GAWTC	4 cut(s)	8, 92, 692, 803
PflFI	GACNNNGTC	1 cut(s)	134
PflMI	CCANNNNNTGG	1 cut(s)	1845
PfoI	TCCNGGA	1 cut(s)	929
PkrI	GCNGC	4 cut(s)	1214, 1899, 1923, 2023
PleI	GAGTC	6 cut(s)	158, 296, 1039, 1419, 1951, 1994
PpsI	GAGTC	6 cut(s)	158, 296, 1039, 1419, 1951, 1994
PsiI	TTATAA	1 cut(s)	828
Psp6I	CCWGG	3 cut(s)	886, 929, 1714
PspFI	CCCAGC	1 cut(s)	1301
PspGI	CCWGG	3 cut(s)	886, 929, 1714
PspN4I	GGNNCC	4 cut(s)	928, 1406, 1482, 1682
PspPI	GGNCC	2 cut(s)	635, 1680
PstNI	CAGNNNCTG	1 cut(s)	1250
PsuI	RGATCY	3 cut(s)	1154, 1231, 1480
PsyI	GACNNNGTC	1 cut(s)	134
RsaI	GTAC	4 cut(s)	300, 1092, 1464, 1564
RsaNI	GTAC	4 cut(s)	299, 1091, 1463, 1563
RseI	CAYNNNNRTG	4 cut(s)	185, 828, 1587, 1838
SatI	GCNGC	4 cut(s)	1213, 1898, 1922, 2022
Sau3AI	GATC	6 cut(s)	189, 838, 1154, 1231, 1480, 2113
Sau96I	GGNCC	2 cut(s)	635, 1680
SchI	GAGTC	6 cut(s)	158, 297, 1040, 1420, 1951, 1994
ScrFI	CCNGG	3 cut(s)	888, 931, 1716
SduI	GDGCHC	1 cut(s)	560
SfaNI	GCATC	6 cut(s)	26, 332, 1375, 1646, 1774, 2008
SfcI	CTRYAG	2 cut(s)	12, 1185
SinI	GGWCC	1 cut(s)	635
SmiMI	CAYNNNNRTG	4 cut(s)	185, 828, 1587, 1838
SmlI	CTYRAG	2 cut(s)	960, 1959
SmoI	CTYRAG	2 cut(s)	960, 1959
SpeI	ACTAGT	1 cut(s)	2087
Sse9I	AATT	9 cut(s)	32, 198, 359, 437, 536, 936, 1826, 1901, 1964
SseBI	AGGCCT	1 cut(s)	1054
SsiI	CCGC	6 cut(s)	449, 578, 1008, 1897, 1924, 2021
SspI	AATATT	1 cut(s)	589
SspMI	CTAG	6 cut(s)	645, 654, 813, 1170, 1646, 2088
StuI	AGGCCT	1 cut(s)	1054
StyD4I	CCNGG	3 cut(s)	886, 929, 1714
StyI	CCWWGG	2 cut(s)	1418, 1839
TaaI	ACNGT	8 cut(s)	122, 134, 704, 716, 864, 1090, 1273, 1459
TaiI	ACGT	3 cut(s)	534, 603, 1315
TaqI	TCGA	2 cut(s)	675, 1034
TasI	AATT	9 cut(s)	32, 198, 359, 437, 536, 936, 1826, 1901, 1964
TatI	WGTACW	1 cut(s)	298
TauI	GCSGC	2 cut(s)	1900, 2024
TfiI	GAWTC	4 cut(s)	8, 92, 692, 803
TscAI	CASTG	1 cut(s)	160
TseFI	GTSAC	3 cut(s)	746, 1180, 1570
TseI	GCWGC	2 cut(s)	1212, 1921
Tsp45I	GTSAC	3 cut(s)	746, 1180, 1570
TspRI	CASTG	1 cut(s)	160
Tth111I	GACNNNGTC	1 cut(s)	134
Van91I	CCANNNNNTGG	1 cut(s)	1845
VpaK11BI	GGWCC	1 cut(s)	635
XapI	RAATTY	6 cut(s)	32, 198, 437, 536, 1826, 1964
XspI	CTAG	6 cut(s)	645, 654, 813, 1170, 1646, 2088
Zsp2I	ATGCAT	1 cut(s)	398

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.