RchiOBHm_Chr6g0305631

BAH domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0004827
Physical Location & Seq
Reverse (-)
64555356 .. 64563602
8247 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ27468

Sequence Viewer

Length: 2418 bp
ATGATTTTGGGGAGGCGAGAGTTGCCGTCGGTGCTTTCCGATCAAAAACAACAACCGTTGAGTGTTAGTCAGGTTGTGGAGAGGCCTGCTCGTAGAATGGTAAAAGTGGAAGAGACTGAAGGTCCTGAATTTAAGTGGGGAATGAAGAAAGCAATTGGTGGAAAAAACAAAGCCACACAGTTCTATAAATCTTTTACTTTCGATGGGGAGCAGTATGACCTTTATGACTGTGTTTATCTTTACAAGGAAGGTGAGCCAGAGCCTGAGATTGGTAAGATAATAAAAATTTGGGAAACTCCACAAAGGATAAGGAGAGTGAAAATCCTATGGTTTTTCCGTCCTTGTGAGATTATCAATTTTCTCGGTGATGAAGAGATACTCGAGAACGAGTTGTTTTTGGCATCTGGTGTTGGTACAGGCCTTTATAATCTGAATCCAGTGGAAGCCATTGCTGGAAAATGCAATGTTCTGTGCATTTCAAAGGACAAGGAAGATCCTCAACCTTCAGATGAGGAGCTTCAAAAGGCCGATTTTGTATTTTACAGAACCTTTGATGTTTCGCTGCAGAAAATCATGGATAAGATAGAGGGGAAAATTGCTGATGTTGATGTTAAATTCCTTTTTAGCAGAATGAATATTCAGAAGCCTGCTGGCGATCTGAATGTTGATTTAGGAAAAAACAAAGTTTGTGGTAATGACACAACAAGTAATGAAACAATGGTTCCATCAAAGCAAAACTCGTTTAAAGAACACATAAATTTAGAGACAACGGGAAATTCTTTTGATAAGCATAAACTTTGTGTGGAAAAGCGGATGTCTGCGGTAGGTTTAGAATCAAGTGAGATGGATAAAACTGATGAAAGACAACAAGATATGTCAAGTCCTAAGACTATCTTAAGTTCTAAAGGTAAAAGTAGGGAGGAAGAGGTTAATCTTGACAACGTTCTTCCAAGAAAGCTTGAGGTGGAAGAAACAATCTCTACTAAGGAGGTTGGTGATTTGGACAATAGACCAACTAAGAAGGTGAAGCTTGACACTAGTAAAGCATCTAGTGACGATAGAAATAGTCACGAGCAAAGACATGTTGAGGCGGAAGAAAATAGCAATAATAGAAAGAGTAATGCTATATTGGAGCACACACAACTTGAGAAGGCAAACACGAATGCAAGCCAAAGTAGCGAGCATAAACACAAGATCAATGCTAATGGGAGTTATATGAAGGATTTATCACCAATTGCTTCTCCAGTCGATGAAAGATGTAAACGCAAAGGTGTAGAGGATACTATTGGGACAAGTAAAAGCCATACCAAGAAGATGAAGCCCGATGTTAACGCAATGATTCCTTCCAATGACAAGTTGCCCAAATCATTGCATGGAGACAGTAAAAGTAAGGCCCAAAAGGCTTTATCACCAAGTAGCTCCACCATCGATGATAAGTGTAAACGTAAAGATGGAGGGGAGTCTTTAGTGGTGGACAAAGACTCCAAGAAGAAGATGAAGTTTGGCGATAAGGCGACAAGTCTTTCCACTAGCAAGCCGCCTAGACCAACCCCAAGGCCGCCTAAAAATAAGGTCCAAAAGTTTGATGGTCAAGTGTTGGAAGTCACCCAACATTCGGATGCGAGTAATGTTGATGGGAATGATAATAAGACTTCATCACCAAATGCTTTTGGATTTGATGATTCGCTTGGGAAACACAAAGCCCCTTTCGAGAAGATGAAGTCCGATCTTAAGGCCCCAAGACTTTCCAATAGGGAGTTGCGTGAACAATCTTCCACACAGTCGCAAAATAAGTCCCAAAAGTTAGATGGTCAAGTTGTGGAAGTTACTCAACGTCCGGGTGCGGATAGAAGAAAGTGGTTCAAGAAGTTTCCCTGGCAAGAGAGAATGCAAGCTGCACACGAGCAAGGAACCCTCATTTTGCTTCAGAATTTGGATCCAGCTTACACGTCAGCGGAAGTGGAGGATATAGTATGGAATGGTTTGGGGGAAAGTTGCACAGCTAAGATGATTCAGCAGACTGCAAATTCCAGCCCTTACTCTGGACAAGCTCTTGTTATTTTTAAAACTCGGGAAACAGCGCAGAAGGTTGTTAGAAAATTAGATGAGGGCTGCTTGTTATTGTCAAATGGAAGACCTCTAGTTGGCAGCACTGCAACAACTCCTTGTTCCACAGAAAGGAAGGCACATTTTTTTGGTCATCTAGCCATTGATAAACTTCGGCACCCAATGCTAAACGAAAGGGAAATGAAAGAAGCTGTTTCTACTTCACATTTTTCCCAGCCTAACACTATTGAATATGATATGTCCATGGAATGGTGTGCACAACAAGAGAAATCAGATCTTTTGTGGAAGAACCTGTATAAGCAACAATGGAAGGAGGTGAGAGAACTCAAAACTAAATTTAAGGCCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAH RRM_1

Protein Analysis

805

Amino Acids

90.99

Weight (kDa)

8.76

Isoelectric Point (pI)

44.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAH PF01426 72 - 186 7.6e-11 BAH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 426
AccB1I GGYRCC 1 cut(s) 2223
AccB7I CCANNNNNTGG 1 cut(s) 2316
AciI CCGC 7 cut(s) 811, 821, 1091, 1538, 1559, 1844, 1955
AclI AACGTT 1 cut(s) 942
AclWI GGATC 3 cut(s) 488, 1931, 1944
AcsI RAATTY 8 cut(s) 128, 285, 614, 757, 775, 1930, 2026, 2402
AcuI CTGAAG 3 cut(s) 138, 489, 1910
AfaI GTAC 1 cut(s) 415
AfiI CCNNNNNNNGG 6 cut(s) 269, 1615, 2042, 2144, 2178, 2316
AflII CTTAAG 2 cut(s) 895, 1730
AflIII ACRYGT 2 cut(s) 1081, 1947
AgsI TTSAA 4 cut(s) 480, 521, 1864, 2297
AhdI GACNNNNNGTC 1 cut(s) 120
AhlI ACTAGT 1 cut(s) 1037
AjiI CACGTC 1 cut(s) 1950
AjnI CCWGG 1 cut(s) 1874
AluBI AGCT 9 cut(s) 517, 958, 1030, 1419, 1895, 1943, 2003, 2051, 2258
AluI AGCT 9 cut(s) 517, 958, 1030, 1419, 1895, 1943, 2003, 2051, 2258
Alw21I GWGCWC 2 cut(s) 1137, 2326
Alw26I GTCTC 3 cut(s) 107, 758, 1371
Alw44I GTGCAC 1 cut(s) 2322
AlwI GGATC 3 cut(s) 488, 1931, 1944
AlwNI CAGNNNCTG 1 cut(s) 263
Ama87I CYCGRG 2 cut(s) 380, 2070
AoxI GGCC 7 cut(s) 83, 418, 525, 1392, 1556, 1734, 2409
ApaLI GTGCAC 1 cut(s) 2322
ApeKI GCWGC 4 cut(s) 562, 1895, 2112, 2148
ApoI RAATTY 8 cut(s) 128, 285, 614, 757, 775, 1930, 2026, 2402
AspLEI GCGC 1 cut(s) 2083
AspS9I GGNCC 4 cut(s) 122, 1393, 1573, 1735
AsuC2I CCSGG 1 cut(s) 1839
AsuHPI GGTGA 9 cut(s) 263, 377, 1007, 1036, 1221, 1401, 1597, 1650, 2395
AvaI CYCGRG 2 cut(s) 380, 2070
AvaII GGWCC 2 cut(s) 122, 1573
BaeGI GKGCMC 1 cut(s) 2326
BamHI GGATCC 1 cut(s) 1936
BanI GGYRCC 1 cut(s) 2223
BauI CACGAG 2 cut(s) 1070, 1901
BbsI GAAGAC 1 cut(s) 2140
Bbv12I GWGCWC 2 cut(s) 1137, 2326
BbvI GCAGC 4 cut(s) 549, 1882, 2099, 2160
BccI CCATC 8 cut(s) 197, 733, 838, 1433, 1445, 1580, 1628, 1802
BceAI ACGGC 1 cut(s) 10
BciT130I CCWGG 1 cut(s) 1876
BciVI GTATCC 1 cut(s) 1273
BcnI CCSGG 1 cut(s) 1839
BcoDI GTCTC 3 cut(s) 107, 758, 1371
BcuI ACTAGT 1 cut(s) 1037
BfaI CTAG 6 cut(s) 1038, 1050, 1530, 1542, 2141, 2204
BfmI CTRYAG 1 cut(s) 563
BfrI CTTAAG 2 cut(s) 895, 1730
BfuI GTATCC 1 cut(s) 1273
BglI GCCNNNNNGGC 1 cut(s) 1400
BglII AGATCT 1 cut(s) 2341
BisI GCNGC 6 cut(s) 563, 1538, 1559, 1896, 2113, 2149
BlsI GCNGC 6 cut(s) 564, 1539, 1560, 1897, 2114, 2150
Bme1390I CCNGG 2 cut(s) 1839, 1876
Bme18I GGWCC 2 cut(s) 122, 1573
BmeRI GACNNNNNGTC 1 cut(s) 120
BmeT110I CYCGRG 2 cut(s) 380, 2070
BmgBI CACGTC 1 cut(s) 1950
BmgT120I GGNCC 4 cut(s) 122, 1393, 1573, 1735
BmiI GGNNCC 5 cut(s) 723, 1737, 1912, 1938, 2225
BmrFI CCNGG 2 cut(s) 1839, 1876
BmsI GCATC 3 cut(s) 410, 1055, 1609
BpiI GAAGAC 1 cut(s) 2140
BplI GAGNNNNNCTC 2 cut(s) 73, 105
BpmI CTGGAG 1 cut(s) 1227
BpuEI CTTGAG 2 cut(s) 980, 1166
BpuMI CCSGG 1 cut(s) 1839
Bsa29I ATCGAT 1 cut(s) 1428
BsaJI CCNNGG 3 cut(s) 1553, 1874, 2310
BsaXI ACNNNNNCTCC 2 cut(s) 1466, 1496
Bsc4I CCNNNNNNNGG 6 cut(s) 269, 1615, 2042, 2144, 2178, 2316
Bse1I ACTGG 2 cut(s) 437, 1244
Bse3DI GCAATG 4 cut(s) 447, 469, 1341, 1367
BseBI CCWGG 1 cut(s) 1876
BseCI ATCGAT 1 cut(s) 1428
BseDI CCNNGG 3 cut(s) 1553, 1874, 2310
BseGI GGATG 2 cut(s) 819, 1624
BseLI CCNNNNNNNGG 6 cut(s) 269, 1615, 2042, 2144, 2178, 2316
BseMI GCAATG 4 cut(s) 447, 469, 1341, 1367
BseMII CTCAG 1 cut(s) 255
BseNI ACTGG 2 cut(s) 437, 1244
BseRI GAGGAG 1 cut(s) 527
BseSI GKGCMC 1 cut(s) 2326
BseXI GCAGC 4 cut(s) 549, 1882, 2099, 2160
BseYI CCCAGC 1 cut(s) 2280
BsgI GTGCAG 1 cut(s) 1881
BshFI GGCC 7 cut(s) 85, 420, 527, 1394, 1558, 1736, 2411
BshNI GGYRCC 1 cut(s) 2223
BshVI ATCGAT 1 cut(s) 1428
BsiHKAI GWGCWC 2 cut(s) 1137, 2326
BsiHKCI CYCGRG 2 cut(s) 380, 2070
BsiSI CCGG 1 cut(s) 1838
BslFI GGGAC 2 cut(s) 1303, 1780
BslI CCNNNNNNNGG 6 cut(s) 269, 1615, 2042, 2144, 2178, 2316
BsmAI GTCTC 3 cut(s) 107, 758, 1371
BsmFI GGGAC 2 cut(s) 1303, 1780
BsmI GAATGC 2 cut(s) 1168, 1893
BsnI GGCC 7 cut(s) 85, 420, 527, 1394, 1558, 1736, 2411
BsoBI CYCGRG 2 cut(s) 380, 2070
Bsp1286I GDGCHC 2 cut(s) 1137, 2326
Bsp143I GATC 7 cut(s) 40, 493, 655, 1194, 1726, 1936, 2341
Bsp19I CCATGG 1 cut(s) 2310
BspACI CCGC 7 cut(s) 811, 821, 1091, 1538, 1559, 1844, 1955
BspANI GGCC 7 cut(s) 85, 420, 527, 1394, 1558, 1736, 2411
BspCNI CTCAG 1 cut(s) 256
BspDI ATCGAT 1 cut(s) 1428
BspLI GGNNCC 5 cut(s) 723, 1737, 1912, 1938, 2225
BspMAI CTGCAG 1 cut(s) 567
BspPI GGATC 3 cut(s) 488, 1931, 1944
BspT107I GGYRCC 1 cut(s) 2223
BspTI CTTAAG 2 cut(s) 895, 1730
BsrDI GCAATG 4 cut(s) 447, 469, 1341, 1367
BsrI ACTGG 2 cut(s) 437, 1244
BssECI CCNNGG 3 cut(s) 1553, 1874, 2310
BssMI GATC 7 cut(s) 40, 493, 655, 1194, 1726, 1936, 2341
BssSI CACGAG 2 cut(s) 1070, 1901
BssT1I CCWWGG 2 cut(s) 1553, 2310
Bst2BI CACGAG 2 cut(s) 1070, 1901
Bst2UI CCWGG 1 cut(s) 1876
Bst4CI ACNGT 5 cut(s) 57, 180, 230, 1382, 1782
Bst6I CTCTTC 3 cut(s) 105, 366, 918
BstAFI CTTAAG 2 cut(s) 895, 1730
BstAPI GCANNNNNTGC 1 cut(s) 2230
BstC8I GCNNGC 7 cut(s) 87, 648, 652, 1168, 1181, 1535, 1893
BstDEI CTNAG 5 cut(s) 264, 885, 984, 1017, 2004
BstDSI CCRYGG 1 cut(s) 2310
BstF5I GGATG 2 cut(s) 819, 1624
BstHHI GCGC 1 cut(s) 2083
BstKTI GATC 7 cut(s) 43, 496, 658, 1197, 1729, 1939, 2344
BstMAI GTCTC 3 cut(s) 107, 758, 1371
BstMBI GATC 7 cut(s) 40, 493, 655, 1194, 1726, 1936, 2341
BstMWI GCNNNNNNNGC 5 cut(s) 22, 31, 1176, 1400, 2230
BstNI CCWGG 1 cut(s) 1876
BstNSI RCATGY 1 cut(s) 1085
BstSCI CCNGG 2 cut(s) 1837, 1874
BstSFI CTRYAG 1 cut(s) 563
BstSLI GKGCMC 1 cut(s) 2326
BstV1I GCAGC 4 cut(s) 549, 1882, 2099, 2160
BstV2I GAAGAC 1 cut(s) 2140
BstX2I RGATCY 3 cut(s) 493, 1936, 2341
BstYI RGATCY 3 cut(s) 493, 1936, 2341
Bsu15I ATCGAT 1 cut(s) 1428
BsuI GTATCC 1 cut(s) 1273
BsuRI GGCC 7 cut(s) 85, 420, 527, 1394, 1558, 1736, 2411
BsuTUI ATCGAT 1 cut(s) 1428
BtgI CCRYGG 1 cut(s) 2310
BtrI CACGTC 1 cut(s) 1950
BtsCI GGATG 2 cut(s) 819, 1624
BtsI GCAGTG 1 cut(s) 2151
BtsIMutI CAGTG 2 cut(s) 444, 2151
Cac8I GCNNGC 7 cut(s) 87, 648, 652, 1168, 1181, 1535, 1893
CaiI CAGNNNCTG 1 cut(s) 263
CfoI GCGC 1 cut(s) 2083
Cfr13I GGNCC 4 cut(s) 122, 1393, 1573, 1735
ClaI ATCGAT 1 cut(s) 1428
Csp6I GTAC 1 cut(s) 414
CspCI CAANNNNNGTGG 2 cut(s) 670, 705
CviAII CATG 4 cut(s) 574, 1082, 1373, 2311
CviQI GTAC 1 cut(s) 414
DdeI CTNAG 5 cut(s) 264, 885, 984, 1017, 2004
DpnI GATC 7 cut(s) 42, 495, 657, 1196, 1728, 1938, 2343
DpnII GATC 7 cut(s) 40, 493, 655, 1194, 1726, 1936, 2341
DraI TTTAAA 2 cut(s) 745, 2065
DriI GACNNNNNGTC 1 cut(s) 120
Eam1104I CTCTTC 3 cut(s) 105, 366, 918
Eam1105I GACNNNNNGTC 1 cut(s) 120
EarI CTCTTC 3 cut(s) 105, 366, 918
EciI GGCGGA 1 cut(s) 1106
Eco130I CCWWGG 2 cut(s) 1553, 2310
Eco147I AGGCCT 2 cut(s) 85, 420
Eco47I GGWCC 2 cut(s) 122, 1573
Eco57I CTGAAG 3 cut(s) 138, 489, 1910
Eco88I CYCGRG 2 cut(s) 380, 2070
EcoO109I RGGNCCY 2 cut(s) 122, 1735
EcoRII CCWGG 1 cut(s) 1874
EcoT14I CCWWGG 2 cut(s) 1553, 2310
ErhI CCWWGG 2 cut(s) 1553, 2310
FaeI CATG 4 cut(s) 577, 1085, 1376, 2314
FalI AAGNNNNNCTT 2 cut(s) 878, 910
FaqI GGGAC 2 cut(s) 1303, 1780
FatI CATG 4 cut(s) 573, 1081, 1372, 2310
Fnu4HI GCNGC 6 cut(s) 563, 1538, 1559, 1896, 2113, 2149
FokI GGATG 2 cut(s) 826, 1631
Fsp4HI GCNGC 6 cut(s) 563, 1538, 1559, 1896, 2113, 2149
FspBI CTAG 6 cut(s) 1038, 1050, 1530, 1542, 2141, 2204
GlaI GCGC 1 cut(s) 2082
GluI GCNGC 6 cut(s) 563, 1538, 1559, 1896, 2113, 2149
GsaI CCCAGC 1 cut(s) 2284
GsuI CTGGAG 1 cut(s) 1227
HaeIII GGCC 7 cut(s) 85, 420, 527, 1394, 1558, 1736, 2411
HapII CCGG 1 cut(s) 1838
HhaI GCGC 1 cut(s) 2083
Hin1II CATG 4 cut(s) 577, 1085, 1376, 2314
Hin6I GCGC 1 cut(s) 2081
HinP1I GCGC 1 cut(s) 2081
HincII GTYRAC 1 cut(s) 1330
HindII GTYRAC 1 cut(s) 1330
HindIII AAGCTT 2 cut(s) 956, 1028
HinfI GANTC 7 cut(s) 433, 833, 1339, 1460, 1481, 1682, 2011
HpaI GTTAAC 1 cut(s) 1330
HpaII CCGG 1 cut(s) 1838
HphI GGTGA 9 cut(s) 263, 377, 1007, 1036, 1221, 1401, 1597, 1650, 2395
Hpy166II GTNNAC 6 cut(s) 1262, 1330, 1442, 1474, 1766, 2324
Hpy188I TCNGA 9 cut(s) 40, 432, 508, 642, 660, 1618, 1726, 1929, 2341
Hpy188III TCNNGA 8 cut(s) 125, 382, 935, 1070, 1711, 1864, 2043, 2072
Hpy8I GTNNAC 6 cut(s) 1262, 1330, 1442, 1474, 1766, 2324
Hpy99I CGWCG 1 cut(s) 31
HpyCH4III ACNGT 5 cut(s) 57, 180, 230, 1382, 1782
HpyCH4IV ACGT 4 cut(s) 942, 1444, 1834, 1949
HpyF10VI GCNNNNNNNGC 5 cut(s) 22, 31, 1176, 1400, 2230
HpyF3I CTNAG 5 cut(s) 264, 885, 984, 1017, 2004
HpySE526I ACGT 4 cut(s) 942, 1444, 1834, 1949
Hsp92II CATG 4 cut(s) 577, 1085, 1376, 2314
HspAI GCGC 1 cut(s) 2081
KspAI GTTAAC 1 cut(s) 1330
Kzo9I GATC 7 cut(s) 40, 493, 655, 1194, 1726, 1936, 2341
LmnI GCTCC 4 cut(s) 208, 514, 1132, 1424
Lsp1109I GCAGC 4 cut(s) 549, 1882, 2099, 2160
LweI GCATC 3 cut(s) 410, 1055, 1609
MaeI CTAG 6 cut(s) 1038, 1050, 1530, 1542, 2141, 2204
MaeII ACGT 4 cut(s) 942, 1444, 1834, 1949
MaeIII GTNAC 4 cut(s) 1052, 1067, 1603, 1825
MalI GATC 7 cut(s) 42, 495, 657, 1196, 1728, 1938, 2343
MboI GATC 7 cut(s) 40, 493, 655, 1194, 1726, 1936, 2341
MfeI CAATTG 2 cut(s) 153, 1233
MflI RGATCY 3 cut(s) 493, 1936, 2341
MhlI GDGCHC 2 cut(s) 1137, 2326
MlyI GAGTC 2 cut(s) 1469, 1475
MmeI TCCRAC 1 cut(s) 1578
MseI TTAA 9 cut(s) 132, 612, 744, 896, 930, 1329, 1731, 2064, 2406
MslI CAYNNNNRTG 1 cut(s) 1617
MspA1I CMGCKG 1 cut(s) 1955
MspCI CTTAAG 2 cut(s) 895, 1730
MspI CCGG 1 cut(s) 1838
MspR9I CCNGG 2 cut(s) 1839, 1876
MunI CAATTG 2 cut(s) 153, 1233
Mva1269I GAATGC 2 cut(s) 1168, 1893
MvaI CCWGG 1 cut(s) 1876
MwoI GCNNNNNNNGC 5 cut(s) 22, 31, 1176, 1400, 2230
NciI CCSGG 1 cut(s) 1839
NcoI CCATGG 1 cut(s) 2310
NdeII GATC 7 cut(s) 40, 493, 655, 1194, 1726, 1936, 2341
NlaIII CATG 4 cut(s) 577, 1085, 1376, 2314
NlaIV GGNNCC 5 cut(s) 723, 1737, 1912, 1938, 2225
NmuCI GTSAC 3 cut(s) 1052, 1067, 1603
NspI RCATGY 1 cut(s) 1085
PaeR7I CTCGAG 1 cut(s) 380
PceI AGGCCT 2 cut(s) 85, 420
PciI ACATGT 1 cut(s) 1081
PctI GAATGC 2 cut(s) 1168, 1893
PfeI GAWTC 5 cut(s) 433, 833, 1339, 1682, 2011
PflMI CCANNNNNTGG 1 cut(s) 2316
PkrI GCNGC 6 cut(s) 564, 1539, 1560, 1897, 2114, 2150
PleI GAGTC 2 cut(s) 1468, 1475
PpsI GAGTC 2 cut(s) 1468, 1475
PpuMI RGGWCCY 1 cut(s) 122
PscI ACATGT 1 cut(s) 1081
PsiI TTATAA 1 cut(s) 426
Psp1406I AACGTT 1 cut(s) 942
Psp5II RGGWCCY 1 cut(s) 122
Psp6I CCWGG 1 cut(s) 1874
PspFI CCCAGC 1 cut(s) 2280
PspGI CCWGG 1 cut(s) 1874
PspN4I GGNNCC 5 cut(s) 723, 1737, 1912, 1938, 2225
PspPI GGNCC 4 cut(s) 122, 1393, 1573, 1735
PspPPI RGGWCCY 1 cut(s) 122
PstI CTGCAG 1 cut(s) 567
PstNI CAGNNNCTG 1 cut(s) 263
PsuI RGATCY 3 cut(s) 493, 1936, 2341
RsaI GTAC 1 cut(s) 415
RsaNI GTAC 1 cut(s) 414
RseI CAYNNNNRTG 1 cut(s) 1617
SaqAI TTAA 9 cut(s) 132, 612, 744, 896, 930, 1329, 1731, 2064, 2406
SatI GCNGC 6 cut(s) 563, 1538, 1559, 1896, 2113, 2149
Sau3AI GATC 7 cut(s) 40, 493, 655, 1194, 1726, 1936, 2341
Sau96I GGNCC 4 cut(s) 122, 1393, 1573, 1735
SchI GAGTC 2 cut(s) 1469, 1475
ScrFI CCNGG 2 cut(s) 1839, 1876
SduI GDGCHC 2 cut(s) 1137, 2326
SfaNI GCATC 3 cut(s) 410, 1055, 1609
SfcI CTRYAG 1 cut(s) 563
Sfr274I CTCGAG 1 cut(s) 380
SinI GGWCC 2 cut(s) 122, 1573
SlaI CTCGAG 1 cut(s) 380
SmiMI CAYNNNNRTG 1 cut(s) 1617
SmlI CTYRAG 5 cut(s) 380, 895, 959, 1145, 1730
SmoI CTYRAG 5 cut(s) 380, 895, 959, 1145, 1730
SpeI ACTAGT 1 cut(s) 1037
SseBI AGGCCT 2 cut(s) 85, 420
SsiI CCGC 7 cut(s) 811, 821, 1091, 1538, 1559, 1844, 1955
SspI AATATT 1 cut(s) 637
SspMI CTAG 6 cut(s) 1038, 1050, 1530, 1542, 2141, 2204
StuI AGGCCT 2 cut(s) 85, 420
StyD4I CCNGG 2 cut(s) 1837, 1874
StyI CCWWGG 2 cut(s) 1553, 2310
TaaI ACNGT 5 cut(s) 57, 180, 230, 1382, 1782
TaiI ACGT 4 cut(s) 945, 1447, 1837, 1952
TaqI TCGA 5 cut(s) 201, 381, 1248, 1428, 1710
TauI GCSGC 2 cut(s) 1540, 1561
TfiI GAWTC 5 cut(s) 433, 833, 1339, 1682, 2011
Tru1I TTAA 9 cut(s) 132, 612, 744, 896, 930, 1329, 1731, 2064, 2406
Tru9I TTAA 9 cut(s) 132, 612, 744, 896, 930, 1329, 1731, 2064, 2406
TscAI CASTG 2 cut(s) 444, 2158
TseFI GTSAC 3 cut(s) 1052, 1067, 1603
TseI GCWGC 4 cut(s) 562, 1895, 2112, 2148
Tsp45I GTSAC 3 cut(s) 1052, 1067, 1603
TspGWI ACGGA 1 cut(s) 326
TspRI CASTG 2 cut(s) 444, 2158
Van91I CCANNNNNTGG 1 cut(s) 2316
Vha464I CTTAAG 2 cut(s) 895, 1730
VneI GTGCAC 1 cut(s) 2322
VpaK11BI GGWCC 2 cut(s) 122, 1573
XapI RAATTY 8 cut(s) 128, 285, 614, 757, 775, 1930, 2026, 2402
XceI RCATGY 1 cut(s) 1085
XcmI CCANNNNNNNNNTGG 2 cut(s) 1583, 1805
XhoI CTCGAG 1 cut(s) 380
XspI CTAG 6 cut(s) 1038, 1050, 1530, 1542, 2141, 2204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.