EF-hand domain pair
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G18580 |
| fragaria_vesca | FvH4_4g17580 FvH4_4g17580 |
| malus_domestica | MD13G1171500.v1.1 MD16G1173200.v1.1 |
| prunus_persica | Prupe.1G140000_v2.0.a1 Prupe.1G140000_v2.0.a1 |
| pyrus_communis | pycom13g14720 pycom16g14520 |
| rosa_chinensis | RchiOBHm_Chr4g0421481 |
| rosa_laevigata | RLG00000007676 |
| rosa_multiflora | Rmu_sc0001962.1_g000024 |
| rosa_roxburghii | Rroxscaffold_5G00363740 |
| rosa_rugosa | Rorug04G0171800 Rorug04G0171900 |
| rosa_samantha | Rh4AG232400 Rh4BG235200 Rh4CG246700 Rh4DG230900 |
| rosa_wichuraiana | Rw4G020170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 551 |
| AccB1I | GGYRCC | 1 cut(s) | 113 |
| AciI | CCGC | 3 cut(s) | 9, 712, 1021 |
| AclWI | GGATC | 8 cut(s) | 19, 49, 120, 133, 256, 315, 740, 943 |
| AcsI | RAATTY | 1 cut(s) | 491 |
| AcuI | CTGAAG | 1 cut(s) | 867 |
| AcyI | GRCGYC | 1 cut(s) | 65 |
| AfaI | GTAC | 1 cut(s) | 284 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 245, 664, 1057 |
| AgsI | TTSAA | 3 cut(s) | 295, 998, 1406 |
| AluBI | AGCT | 6 cut(s) | 134, 145, 274, 572, 592, 719 |
| AluI | AGCT | 6 cut(s) | 134, 145, 274, 572, 592, 719 |
| Alw26I | GTCTC | 3 cut(s) | 143, 672, 1251 |
| AlwI | GGATC | 8 cut(s) | 19, 49, 120, 133, 256, 315, 740, 943 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 795, 851 |
| Ama87I | CYCGRG | 2 cut(s) | 167, 1050 |
| AoxI | GGCC | 1 cut(s) | 690 |
| ApeKI | GCWGC | 1 cut(s) | 335 |
| ApoI | RAATTY | 1 cut(s) | 491 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1251 |
| AspLEI | GCGC | 1 cut(s) | 552 |
| AspS9I | GGNCC | 3 cut(s) | 265, 449, 975 |
| AsuC2I | CCSGG | 2 cut(s) | 1051, 1052 |
| AsuHPI | GGTGA | 4 cut(s) | 35, 1196, 1288, 1322 |
| AvaI | CYCGRG | 2 cut(s) | 167, 1050 |
| AvaII | GGWCC | 3 cut(s) | 265, 449, 975 |
| AxyI | CCTNAGG | 1 cut(s) | 1425 |
| BamHI | GGATCC | 1 cut(s) | 125 |
| BanI | GGYRCC | 1 cut(s) | 113 |
| BanII | GRGCYC | 1 cut(s) | 1381 |
| BbsI | GAAGAC | 3 cut(s) | 60, 414, 606 |
| BbvI | GCAGC | 1 cut(s) | 322 |
| BccI | CCATC | 4 cut(s) | 14, 484, 602, 965 |
| BceAI | ACGGC | 1 cut(s) | 1008 |
| BcnI | CCSGG | 2 cut(s) | 1051, 1052 |
| BcoDI | GTCTC | 3 cut(s) | 143, 672, 1251 |
| BfaI | CTAG | 2 cut(s) | 15, 573 |
| BfmI | CTRYAG | 1 cut(s) | 800 |
| BglII | AGATCT | 1 cut(s) | 1263 |
| BisI | GCNGC | 2 cut(s) | 336, 712 |
| BlsI | GCNGC | 2 cut(s) | 337, 713 |
| Bme1390I | CCNGG | 2 cut(s) | 1051, 1052 |
| Bme18I | GGWCC | 3 cut(s) | 265, 449, 975 |
| BmeT110I | CYCGRG | 2 cut(s) | 167, 1050 |
| BmgT120I | GGNCC | 3 cut(s) | 265, 449, 975 |
| BmiI | GGNNCC | 8 cut(s) | 109, 115, 127, 266, 451, 976, 977, 1339 |
| BmrFI | CCNGG | 2 cut(s) | 1051, 1052 |
| BmsI | GCATC | 4 cut(s) | 63, 367, 537, 829 |
| BoxI | GACNNNNGTC | 1 cut(s) | 414 |
| BpiI | GAAGAC | 3 cut(s) | 60, 414, 606 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1149, 1181 |
| BpmI | CTGGAG | 1 cut(s) | 1095 |
| BpuEI | CTTGAG | 1 cut(s) | 167 |
| BpuMI | CCSGG | 2 cut(s) | 1051, 1052 |
| BsaBI | GATNNNNATC | 1 cut(s) | 124 |
| BsaHI | GRCGYC | 1 cut(s) | 65 |
| BsaJI | CCNNGG | 3 cut(s) | 1024, 1050, 1150 |
| BsaWI | WCCGGW | 1 cut(s) | 110 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 245, 664, 1057 |
| Bse118I | RCCGGY | 2 cut(s) | 61, 462 |
| Bse1I | ACTGG | 1 cut(s) | 388 |
| Bse21I | CCTNAGG | 1 cut(s) | 1425 |
| Bse3DI | GCAATG | 1 cut(s) | 420 |
| Bse8I | GATNNNNATC | 1 cut(s) | 124 |
| BseDI | CCNNGG | 3 cut(s) | 1024, 1050, 1150 |
| BseGI | GGATG | 3 cut(s) | 476, 508, 1328 |
| BseJI | GATNNNNATC | 1 cut(s) | 124 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 245, 664, 1057 |
| BseMI | GCAATG | 1 cut(s) | 420 |
| BseMII | CTCAG | 4 cut(s) | 665, 802, 975, 1416 |
| BseNI | ACTGG | 1 cut(s) | 388 |
| BseRI | GAGGAG | 1 cut(s) | 848 |
| BseXI | GCAGC | 1 cut(s) | 322 |
| BseYI | CCCAGC | 1 cut(s) | 509 |
| BshFI | GGCC | 1 cut(s) | 692 |
| BshNI | GGYRCC | 1 cut(s) | 113 |
| BsiHKCI | CYCGRG | 2 cut(s) | 167, 1050 |
| BsiSI | CCGG | 6 cut(s) | 62, 111, 117, 463, 689, 1051 |
| BslFI | GGGAC | 3 cut(s) | 435, 988, 1283 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 245, 664, 1057 |
| BsmAI | GTCTC | 3 cut(s) | 143, 672, 1251 |
| BsmBI | CGTCTC | 2 cut(s) | 143, 1251 |
| BsmFI | GGGAC | 3 cut(s) | 435, 988, 1283 |
| BsnI | GGCC | 1 cut(s) | 692 |
| BsoBI | CYCGRG | 2 cut(s) | 167, 1050 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1381 |
| BspACI | CCGC | 3 cut(s) | 9, 712, 1021 |
| BspANI | GGCC | 1 cut(s) | 692 |
| BspCNI | CTCAG | 4 cut(s) | 666, 801, 976, 1417 |
| BspHI | TCATGA | 3 cut(s) | 31, 486, 1381 |
| BspLI | GGNNCC | 8 cut(s) | 109, 115, 127, 266, 451, 976, 977, 1339 |
| BspMAI | CTGCAG | 1 cut(s) | 804 |
| BspPI | GGATC | 8 cut(s) | 19, 49, 120, 133, 256, 315, 740, 943 |
| BspQI | GCTCTTC | 1 cut(s) | 757 |
| BspT107I | GGYRCC | 1 cut(s) | 113 |
| BsrDI | GCAATG | 1 cut(s) | 420 |
| BsrFI | RCCGGY | 2 cut(s) | 61, 462 |
| BsrI | ACTGG | 1 cut(s) | 388 |
| BssAI | RCCGGY | 2 cut(s) | 61, 462 |
| BssECI | CCNNGG | 3 cut(s) | 1024, 1050, 1150 |
| BssNI | GRCGYC | 1 cut(s) | 65 |
| BssT1I | CCWWGG | 1 cut(s) | 1150 |
| Bst4CI | ACNGT | 9 cut(s) | 287, 531, 556, 797, 1070, 1239, 1284, 1342, 1391 |
| Bst6I | CTCTTC | 3 cut(s) | 149, 757, 1425 |
| BstACI | GRCGYC | 1 cut(s) | 65 |
| BstC8I | GCNNGC | 6 cut(s) | 208, 276, 769, 1042, 1348, 1352 |
| BstDEI | CTNAG | 5 cut(s) | 674, 788, 984, 1425, 1437 |
| BstDSI | CCRYGG | 1 cut(s) | 1024 |
| BstF5I | GGATG | 3 cut(s) | 476, 508, 1328 |
| BstHHI | GCGC | 1 cut(s) | 552 |
| BstMAI | GTCTC | 3 cut(s) | 143, 672, 1251 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 15, 386 |
| BstNSI | RCATGY | 3 cut(s) | 685, 1019, 1354 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 414 |
| BstSCI | CCNGG | 2 cut(s) | 1049, 1050 |
| BstSFI | CTRYAG | 1 cut(s) | 800 |
| BstV1I | GCAGC | 1 cut(s) | 322 |
| BstV2I | GAAGAC | 3 cut(s) | 60, 414, 606 |
| BstX2I | RGATCY | 6 cut(s) | 11, 54, 125, 248, 307, 1263 |
| BstYI | RGATCY | 6 cut(s) | 11, 54, 125, 248, 307, 1263 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1425 |
| BsuRI | GGCC | 1 cut(s) | 692 |
| BtgI | CCRYGG | 1 cut(s) | 1024 |
| BtgZI | GCGATG | 1 cut(s) | 33 |
| BtsCI | GGATG | 3 cut(s) | 476, 508, 1328 |
| BtsIMutI | CAGTG | 3 cut(s) | 381, 435, 849 |
| Cac8I | GCNNGC | 6 cut(s) | 208, 276, 769, 1042, 1348, 1352 |
| CaiI | CAGNNNCTG | 2 cut(s) | 795, 851 |
| CciI | TCATGA | 3 cut(s) | 31, 486, 1381 |
| CfoI | GCGC | 1 cut(s) | 552 |
| Cfr10I | RCCGGY | 2 cut(s) | 61, 462 |
| Cfr13I | GGNCC | 3 cut(s) | 265, 449, 975 |
| Cfr9I | CCCGGG | 1 cut(s) | 1050 |
| CseI | GACGC | 2 cut(s) | 52, 54 |
| Csp6I | GTAC | 1 cut(s) | 283 |
| CviAII | CATG | 7 cut(s) | 32, 487, 682, 1016, 1273, 1351, 1382 |
| CviQI | GTAC | 1 cut(s) | 283 |
| DdeI | CTNAG | 5 cut(s) | 674, 788, 984, 1425, 1437 |
| DraI | TTTAAA | 1 cut(s) | 178 |
| Eam1104I | CTCTTC | 3 cut(s) | 149, 757, 1425 |
| EarI | CTCTTC | 3 cut(s) | 149, 757, 1425 |
| EciI | GGCGGA | 1 cut(s) | 1010 |
| Eco130I | CCWWGG | 1 cut(s) | 1150 |
| Eco24I | GRGCYC | 1 cut(s) | 1381 |
| Eco47I | GGWCC | 3 cut(s) | 265, 449, 975 |
| Eco57I | CTGAAG | 1 cut(s) | 867 |
| Eco81I | CCTNAGG | 1 cut(s) | 1425 |
| Eco88I | CYCGRG | 2 cut(s) | 167, 1050 |
| EcoO109I | RGGNCCY | 1 cut(s) | 975 |
| EcoT14I | CCWWGG | 1 cut(s) | 1150 |
| EcoT38I | GRGCYC | 1 cut(s) | 1381 |
| ErhI | CCWWGG | 1 cut(s) | 1150 |
| Esp3I | CGTCTC | 2 cut(s) | 143, 1251 |
| FaeI | CATG | 7 cut(s) | 35, 490, 685, 1019, 1276, 1354, 1385 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 146, 178, 719, 751 |
| FaqI | GGGAC | 3 cut(s) | 435, 988, 1283 |
| FatI | CATG | 7 cut(s) | 31, 486, 681, 1015, 1272, 1350, 1381 |
| FauNDI | CATATG | 1 cut(s) | 896 |
| Fnu4HI | GCNGC | 2 cut(s) | 336, 712 |
| FokI | GGATG | 3 cut(s) | 463, 515, 1335 |
| FriOI | GRGCYC | 1 cut(s) | 1381 |
| Fsp4HI | GCNGC | 2 cut(s) | 336, 712 |
| FspAI | RTGCGCAY | 1 cut(s) | 551 |
| FspBI | CTAG | 2 cut(s) | 15, 573 |
| FspI | TGCGCA | 1 cut(s) | 551 |
| GlaI | GCGC | 1 cut(s) | 551 |
| GluI | GCNGC | 2 cut(s) | 336, 712 |
| GsaI | CCCAGC | 1 cut(s) | 513 |
| GsuI | CTGGAG | 1 cut(s) | 1095 |
| HaeIII | GGCC | 1 cut(s) | 692 |
| HapII | CCGG | 6 cut(s) | 62, 111, 117, 463, 689, 1051 |
| HgaI | GACGC | 2 cut(s) | 52, 54 |
| HhaI | GCGC | 1 cut(s) | 552 |
| Hin1I | GRCGYC | 1 cut(s) | 65 |
| Hin1II | CATG | 7 cut(s) | 35, 490, 685, 1019, 1276, 1354, 1385 |
| Hin6I | GCGC | 1 cut(s) | 550 |
| HinP1I | GCGC | 1 cut(s) | 550 |
| HindIII | AAGCTT | 1 cut(s) | 272 |
| HinfI | GANTC | 5 cut(s) | 28, 159, 602, 635, 1433 |
| HpaII | CCGG | 6 cut(s) | 62, 111, 117, 463, 689, 1051 |
| HphI | GGTGA | 4 cut(s) | 35, 1196, 1288, 1322 |
| Hpy166II | GTNNAC | 2 cut(s) | 1204, 1328 |
| Hpy188I | TCNGA | 6 cut(s) | 130, 307, 607, 625, 1196, 1288 |
| Hpy8I | GTNNAC | 2 cut(s) | 1204, 1328 |
| Hpy99I | CGWCG | 2 cut(s) | 46, 99 |
| HpyAV | CCTTC | 5 cut(s) | 239, 493, 626, 1214, 1409 |
| HpyCH4III | ACNGT | 9 cut(s) | 287, 531, 556, 797, 1070, 1239, 1284, 1342, 1391 |
| HpyCH4IV | ACGT | 1 cut(s) | 1124 |
| HpyCH4V | TGCA | 7 cut(s) | 278, 435, 771, 802, 820, 945, 1242 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 15, 386 |
| HpyF3I | CTNAG | 5 cut(s) | 674, 788, 984, 1425, 1437 |
| HpySE526I | ACGT | 1 cut(s) | 1124 |
| Hsp92I | GRCGYC | 1 cut(s) | 65 |
| Hsp92II | CATG | 7 cut(s) | 35, 490, 685, 1019, 1276, 1354, 1385 |
| HspAI | GCGC | 1 cut(s) | 550 |
| KflI | GGGWCCC | 1 cut(s) | 975 |
| LguI | GCTCTTC | 1 cut(s) | 757 |
| LmnI | GCTCC | 1 cut(s) | 142 |
| Lsp1109I | GCAGC | 1 cut(s) | 322 |
| LweI | GCATC | 4 cut(s) | 63, 367, 537, 829 |
| MaeI | CTAG | 2 cut(s) | 15, 573 |
| MaeII | ACGT | 1 cut(s) | 1124 |
| MaeIII | GTNAC | 3 cut(s) | 416, 791, 841 |
| MflI | RGATCY | 6 cut(s) | 11, 54, 125, 248, 307, 1263 |
| MhlI | GDGCHC | 1 cut(s) | 1381 |
| MluCI | AATT | 6 cut(s) | 361, 481, 491, 815, 865, 1045 |
| MlyI | GAGTC | 4 cut(s) | 37, 596, 644, 1442 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1251 |
| MseI | TTAA | 6 cut(s) | 177, 317, 696, 774, 957, 1295 |
| MslI | CAYNNNNRTG | 1 cut(s) | 624 |
| MspI | CCGG | 6 cut(s) | 62, 111, 117, 463, 689, 1051 |
| MspR9I | CCNGG | 2 cut(s) | 1051, 1052 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 15, 386 |
| NciI | CCSGG | 2 cut(s) | 1051, 1052 |
| NdeI | CATATG | 1 cut(s) | 896 |
| NlaIII | CATG | 7 cut(s) | 35, 490, 685, 1019, 1276, 1354, 1385 |
| NlaIV | GGNNCC | 8 cut(s) | 109, 115, 127, 266, 451, 976, 977, 1339 |
| NmuCI | GTSAC | 2 cut(s) | 416, 841 |
| NsbI | TGCGCA | 1 cut(s) | 551 |
| NspI | RCATGY | 3 cut(s) | 685, 1019, 1354 |
| PaeI | GCATGC | 1 cut(s) | 1354 |
| PaeR7I | CTCGAG | 1 cut(s) | 167 |
| PagI | TCATGA | 3 cut(s) | 31, 486, 1381 |
| PciSI | GCTCTTC | 1 cut(s) | 757 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1251 |
| PfeI | GAWTC | 1 cut(s) | 159 |
| PkrI | GCNGC | 2 cut(s) | 337, 713 |
| PleI | GAGTC | 4 cut(s) | 36, 596, 643, 1441 |
| PpsI | GAGTC | 4 cut(s) | 36, 596, 643, 1441 |
| PpuMI | RGGWCCY | 1 cut(s) | 975 |
| PshAI | GACNNNNGTC | 1 cut(s) | 414 |
| Psp5II | RGGWCCY | 1 cut(s) | 975 |
| PspFI | CCCAGC | 1 cut(s) | 509 |
| PspN4I | GGNNCC | 8 cut(s) | 109, 115, 127, 266, 451, 976, 977, 1339 |
| PspPI | GGNCC | 3 cut(s) | 265, 449, 975 |
| PspPPI | RGGWCCY | 1 cut(s) | 975 |
| PstI | CTGCAG | 1 cut(s) | 804 |
| PstNI | CAGNNNCTG | 2 cut(s) | 795, 851 |
| PsuI | RGATCY | 6 cut(s) | 11, 54, 125, 248, 307, 1263 |
| RsaI | GTAC | 1 cut(s) | 284 |
| RsaNI | GTAC | 1 cut(s) | 283 |
| RseI | CAYNNNNRTG | 1 cut(s) | 624 |
| SapI | GCTCTTC | 1 cut(s) | 757 |
| SaqAI | TTAA | 6 cut(s) | 177, 317, 696, 774, 957, 1295 |
| SatI | GCNGC | 2 cut(s) | 336, 712 |
| Sau96I | GGNCC | 3 cut(s) | 265, 449, 975 |
| SchI | GAGTC | 4 cut(s) | 37, 596, 644, 1442 |
| ScrFI | CCNGG | 2 cut(s) | 1051, 1052 |
| SduI | GDGCHC | 1 cut(s) | 1381 |
| SfaNI | GCATC | 4 cut(s) | 63, 367, 537, 829 |
| SfcI | CTRYAG | 1 cut(s) | 800 |
| Sfr274I | CTCGAG | 1 cut(s) | 167 |
| SgrAI | CRCCGGYG | 1 cut(s) | 61 |
| SinI | GGWCC | 3 cut(s) | 265, 449, 975 |
| SlaI | CTCGAG | 1 cut(s) | 167 |
| SmaI | CCCGGG | 1 cut(s) | 1052 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 624 |
| SmlI | CTYRAG | 2 cut(s) | 146, 167 |
| SmoI | CTYRAG | 2 cut(s) | 146, 167 |
| SphI | GCATGC | 1 cut(s) | 1354 |
| Sse9I | AATT | 6 cut(s) | 361, 481, 491, 815, 865, 1045 |
| SsiI | CCGC | 3 cut(s) | 9, 712, 1021 |
| SspMI | CTAG | 2 cut(s) | 15, 573 |
| StyD4I | CCNGG | 2 cut(s) | 1049, 1050 |
| StyI | CCWWGG | 1 cut(s) | 1150 |
| TaaI | ACNGT | 9 cut(s) | 287, 531, 556, 797, 1070, 1239, 1284, 1342, 1391 |
| TaiI | ACGT | 1 cut(s) | 1127 |
| TaqI | TCGA | 6 cut(s) | 41, 71, 168, 1008, 1077, 1255 |
| TaqII | GACCGA | 1 cut(s) | 437 |
| TasI | AATT | 6 cut(s) | 361, 481, 491, 815, 865, 1045 |
| TauI | GCSGC | 1 cut(s) | 714 |
| TfiI | GAWTC | 1 cut(s) | 159 |
| Tru1I | TTAA | 6 cut(s) | 177, 317, 696, 774, 957, 1295 |
| Tru9I | TTAA | 6 cut(s) | 177, 317, 696, 774, 957, 1295 |
| TscAI | CASTG | 3 cut(s) | 388, 442, 856 |
| TseFI | GTSAC | 2 cut(s) | 416, 841 |
| TseI | GCWGC | 1 cut(s) | 335 |
| Tsp45I | GTSAC | 2 cut(s) | 416, 841 |
| TspDTI | ATGAA | 8 cut(s) | 413, 420, 475, 503, 608, 642, 982, 1248 |
| TspGWI | ACGGA | 1 cut(s) | 1124 |
| TspMI | CCCGGG | 1 cut(s) | 1050 |
| TspRI | CASTG | 3 cut(s) | 388, 442, 856 |
| VpaK11BI | GGWCC | 3 cut(s) | 265, 449, 975 |
| XapI | RAATTY | 1 cut(s) | 491 |
| XceI | RCATGY | 3 cut(s) | 685, 1019, 1354 |
| XhoI | CTCGAG | 1 cut(s) | 167 |
| XmaI | CCCGGG | 1 cut(s) | 1050 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1251 |
| XspI | CTAG | 2 cut(s) | 15, 573 |