Rh4DG230900

serine threonine-protein phosphatase 2A regulatory subunit B'' subunit

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Reverse (-)
43692635 .. 43698992
6358 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG230900.1

Sequence Viewer

Length: 1197 bp
ATGTACAGCGGGTCCAGTGACGGCGAAAGCCATGAGACCGCGCAGAGGAAGATCCCACCGGCTTCGTCTATGTTGTGGGTCCGCAACCTCCGCCGCTACATCGGATCCGGGGCCGGACTCGGATCCGAAGCCCTCATGGAGCTTGAAACAAAGAGAATCTTGCTTGACATTTTCAAAGAGAAGCAACAAAAAAGTGCTGAAGCTGCCACAATCCCAAGTTTCTATAAGAAGAAACCTGAAGAAGGATCTATTAGTCAAAGGGTCCAGAGGCTTGCAAAATATCGGTTTTTAAAGAAGCAATCTGATCTTTTGCTAAATGCTGATGATCTAGATTCCATGTGGGTTTGCTTAAGGGAAAATTGTGTGATTGATGATGCAACTGGTGCAGAGAAGATGAATTATGAAGACTTCTGCCACATTGCCTCTGTATGCACAGAGCTGATAGGGCCCAAATGCCGTCGCTTTTTCAGCCCTTCAAATTTCATGAAGTTTGAGAAAGATGAACAAGGAAGAATTGCCATTCTGCCCTTCTATCTCTATGTGATGAGAACGGTTTCACTGACACAAGCTAGAATTGACATGAGTGAGCTTGATGAGGATTCTGATGGTTTTCTTCAGCGTCATGAAATGGAAGCATATATACGAGGTCTCATACCTAATCTGGCGCAACTACGGGATATGCCTGCAGGATTTCTTAATATGTACTGCCGCATAGCTGCACAGAAGTTTTTCTTCTTTTGTGATCCTCATAGACGAGGAAAAGCCTGCATAAAGAAGGTGTTATTGAGTAATTGTCTCCAGGAATTAATGGAACTGCACCAGGAAAGTGAGGAAGAAGTCACTGACAATGAGCAAGCAGAAAATTGGTTCTCCATGACATCTGCTCAGCGAATATGTGATGTGTTCCTTGGCCTTGATACAGATAATAATGGATCATTAAGCAAGCAAGAACTTCGAGAATATGCAGATGGGACGTTGACTGAAATCATCATTGAAAGAGTGTTTGATGAGCATGCTCGTCGTGGAAAAATTGGTGGAGCAAATTCTAGGGAAATGGACTTCGAAAGTTTTCTGGACTTTGTCCTGGCCTTAGAAAACAAAGACACTCCAGAAGGGTTAACATATTTGTTTCGATGCCTTGATCTTCATGGAAGGGGTTACCTTACAACAGCTGATATACACTCTCTTTTCAGGTGA

Protein Analysis

398

Amino Acids

45.73

Weight (kDa)

5.33

Isoelectric Point (pI)

49.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011013)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 41
AciI CCGC 6 cut(s) 9, 39, 82, 91, 94, 709
AclWI GGATC 8 cut(s) 46, 99, 112, 117, 130, 253, 737, 940
AcsI RAATTY 2 cut(s) 478, 1042
AcuI CTGAAG 3 cut(s) 219, 258, 599
AfaI GTAC 2 cut(s) 5, 704
AfiI CCNNNNNNNGG 2 cut(s) 45, 242
AflII CTTAAG 1 cut(s) 349
AgsI TTSAA 4 cut(s) 146, 175, 477, 995
AjnI CCWGG 3 cut(s) 798, 819, 1083
AluBI AGCT 7 cut(s) 142, 203, 439, 569, 589, 716, 1172
AluI AGCT 7 cut(s) 142, 203, 439, 569, 589, 716, 1172
Alw26I GTCTC 3 cut(s) 29, 653, 800
AlwI GGATC 8 cut(s) 46, 99, 112, 117, 130, 253, 737, 940
AoxI GGCC 4 cut(s) 111, 446, 910, 1086
ApaI GGGCCC 1 cut(s) 450
ApeKI GCWGC 2 cut(s) 203, 716
ApoI RAATTY 2 cut(s) 478, 1042
AseI ATTAAT 1 cut(s) 806
Asp700I GAANNNNTTC 3 cut(s) 553, 728, 1068
AspLEI GCGC 2 cut(s) 43, 667
AspS9I GGNCC 6 cut(s) 12, 79, 111, 262, 446, 447
AsuC2I CCSGG 1 cut(s) 109
AsuII TTCGAA 1 cut(s) 1062
AvaII GGWCC 3 cut(s) 12, 79, 262
BaeGI GKGCMC 1 cut(s) 450
BamHI GGATCC 2 cut(s) 104, 122
BanII GRGCYC 1 cut(s) 450
BarI GAAGNNNNNNTAC 2 cut(s) 624, 656
BbsI GAAGAC 1 cut(s) 411
BbvI GCAGC 2 cut(s) 190, 703
BccI CCATC 2 cut(s) 599, 962
BceAI ACGGC 2 cut(s) 37, 441
BcgI CGANNNNNNTGC 4 cut(s) 935, 969, 1001, 1035
BciT130I CCWGG 3 cut(s) 800, 821, 1085
BcnI CCSGG 1 cut(s) 109
BcoDI GTCTC 3 cut(s) 29, 653, 800
BfaI CTAG 3 cut(s) 329, 570, 1047
BfmI CTRYAG 1 cut(s) 684
BfrI CTTAAG 1 cut(s) 349
BisI GCNGC 4 cut(s) 94, 204, 709, 717
BlpI GCTNAGC 1 cut(s) 885
BlsI GCNGC 4 cut(s) 95, 205, 710, 718
Bme1390I CCNGG 4 cut(s) 109, 800, 821, 1085
Bme18I GGWCC 3 cut(s) 12, 79, 262
BmgT120I GGNCC 6 cut(s) 12, 79, 111, 262, 446, 447
BmiI GGNNCC 7 cut(s) 13, 80, 106, 112, 124, 263, 448
BmrFI CCNGG 4 cut(s) 109, 800, 821, 1085
BmsI GCATC 2 cut(s) 364, 1124
BpiI GAAGAC 1 cut(s) 411
BpmI CTGGAG 2 cut(s) 782, 1092
Bpu1102I GCTNAGC 1 cut(s) 885
Bpu14I TTCGAA 1 cut(s) 1062
BpuMI CCSGG 1 cut(s) 109
BsaI GGTCTC 2 cut(s) 29, 653
BsaJI CCNNGG 2 cut(s) 108, 907
Bsc4I CCNNNNNNNGG 2 cut(s) 45, 242
Bse118I RCCGGY 1 cut(s) 58
Bse1I ACTGG 2 cut(s) 15, 385
Bse3DI GCAATG 1 cut(s) 417
BseBI CCWGG 3 cut(s) 800, 821, 1085
BseDI CCNNGG 2 cut(s) 108, 907
BseLI CCNNNNNNNGG 2 cut(s) 45, 242
BseMI GCAATG 1 cut(s) 417
BseMII CTCAG 1 cut(s) 899
BseNI ACTGG 2 cut(s) 15, 385
BseSI GKGCMC 1 cut(s) 450
BseXI GCAGC 2 cut(s) 190, 703
BsgI GTGCAG 3 cut(s) 405, 702, 800
Bsh1236I CGCG 1 cut(s) 41
BshFI GGCC 4 cut(s) 113, 448, 912, 1088
BsiSI CCGG 3 cut(s) 59, 108, 114
BslFI GGGAC 1 cut(s) 985
BslI CCNNNNNNNGG 2 cut(s) 45, 242
BsmAI GTCTC 3 cut(s) 29, 653, 800
BsmFI GGGAC 1 cut(s) 985
BsnI GGCC 4 cut(s) 113, 448, 912, 1088
Bso31I GGTCTC 2 cut(s) 29, 653
Bsp119I TTCGAA 1 cut(s) 1062
Bsp120I GGGCCC 1 cut(s) 446
Bsp1286I GDGCHC 1 cut(s) 450
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 9 cut(s) 51, 104, 122, 245, 304, 325, 742, 932, 1141
Bsp1720I GCTNAGC 1 cut(s) 885
BspACI CCGC 6 cut(s) 9, 39, 82, 91, 94, 709
BspANI GGCC 4 cut(s) 113, 448, 912, 1088
BspCNI CTCAG 1 cut(s) 898
BspFNI CGCG 1 cut(s) 41
BspHI TCATGA 2 cut(s) 483, 622
BspLI GGNNCC 7 cut(s) 13, 80, 106, 112, 124, 263, 448
BspMAI CTGCAG 1 cut(s) 688
BspPI GGATC 8 cut(s) 46, 99, 112, 117, 130, 253, 737, 940
BspT104I TTCGAA 1 cut(s) 1062
BspTI CTTAAG 1 cut(s) 349
BspTNI GGTCTC 2 cut(s) 29, 653
BsrDI GCAATG 1 cut(s) 417
BsrFI RCCGGY 1 cut(s) 58
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 2 cut(s) 15, 385
BssAI RCCGGY 1 cut(s) 58
BssECI CCNNGG 2 cut(s) 108, 907
BssMI GATC 9 cut(s) 51, 104, 122, 245, 304, 325, 742, 932, 1141
BssT1I CCWWGG 1 cut(s) 907
Bst2UI CCWGG 3 cut(s) 800, 821, 1085
Bst4CI ACNGT 1 cut(s) 553
BstAFI CTTAAG 1 cut(s) 349
BstAPI GCANNNNNTGC 1 cut(s) 383
BstAUI TGTACA 1 cut(s) 3
BstBI TTCGAA 1 cut(s) 1062
BstC8I GCNNGC 6 cut(s) 273, 684, 766, 855, 944, 1014
BstDEI CTNAG 2 cut(s) 885, 1090
BstEII GGTNACC 1 cut(s) 1157
BstENI CCTNNNNNAGG 1 cut(s) 240
BstFNI CGCG 1 cut(s) 41
BstHHI GCGC 2 cut(s) 43, 667
BstKTI GATC 9 cut(s) 54, 107, 125, 248, 307, 328, 745, 935, 1144
BstMAI GTCTC 3 cut(s) 29, 653, 800
BstMBI GATC 9 cut(s) 51, 104, 122, 245, 304, 325, 742, 932, 1141
BstMWI GCNNNNNNNGC 5 cut(s) 90, 203, 383, 445, 468
BstNI CCWGG 3 cut(s) 800, 821, 1085
BstNSI RCATGY 1 cut(s) 1016
BstPI GGTNACC 1 cut(s) 1157
BstSCI CCNGG 4 cut(s) 107, 798, 819, 1083
BstSFI CTRYAG 1 cut(s) 684
BstSLI GKGCMC 1 cut(s) 450
BstUI CGCG 1 cut(s) 41
BstV1I GCAGC 2 cut(s) 190, 703
BstV2I GAAGAC 1 cut(s) 411
BstX2I RGATCY 4 cut(s) 51, 104, 122, 245
BstYI RGATCY 4 cut(s) 51, 104, 122, 245
BsuRI GGCC 4 cut(s) 113, 448, 912, 1088
BtsIMutI CAGTG 3 cut(s) 22, 557, 840
Cac8I GCNNGC 6 cut(s) 273, 684, 766, 855, 944, 1014
CciI TCATGA 2 cut(s) 483, 622
CfoI GCGC 2 cut(s) 43, 667
Cfr10I RCCGGY 1 cut(s) 58
Cfr13I GGNCC 6 cut(s) 12, 79, 111, 262, 446, 447
CseI GACGC 1 cut(s) 608
Csp6I GTAC 2 cut(s) 4, 703
CviAII CATG 9 cut(s) 32, 136, 337, 484, 580, 623, 874, 1013, 1148
CviQI GTAC 2 cut(s) 4, 703
DdeI CTNAG 2 cut(s) 885, 1090
DpnI GATC 9 cut(s) 53, 106, 124, 247, 306, 327, 744, 934, 1143
DpnII GATC 9 cut(s) 51, 104, 122, 245, 304, 325, 742, 932, 1141
DraI TTTAAA 1 cut(s) 291
EciI GGCGGA 1 cut(s) 80
Eco130I CCWWGG 1 cut(s) 907
Eco24I GRGCYC 1 cut(s) 450
Eco31I GGTCTC 2 cut(s) 29, 653
Eco47I GGWCC 3 cut(s) 12, 79, 262
Eco57I CTGAAG 3 cut(s) 219, 258, 599
Eco91I GGTNACC 1 cut(s) 1157
EcoNI CCTNNNNNAGG 1 cut(s) 240
EcoO109I RGGNCCY 1 cut(s) 446
EcoO65I GGTNACC 1 cut(s) 1157
EcoRII CCWGG 3 cut(s) 798, 819, 1083
EcoT14I CCWWGG 1 cut(s) 907
EcoT38I GRGCYC 1 cut(s) 450
ErhI CCWWGG 1 cut(s) 907
FaeI CATG 9 cut(s) 35, 139, 340, 487, 583, 626, 877, 1016, 1151
FalI AAGNNNNNCTT 4 cut(s) 143, 175, 716, 748
FaqI GGGAC 1 cut(s) 985
FatI CATG 9 cut(s) 31, 135, 336, 483, 579, 622, 873, 1012, 1147
FauI CCCGC 1 cut(s) 2
Fnu4HI GCNGC 4 cut(s) 94, 204, 709, 717
FriOI GRGCYC 1 cut(s) 450
Fsp4HI GCNGC 4 cut(s) 94, 204, 709, 717
FspBI CTAG 3 cut(s) 329, 570, 1047
GlaI GCGC 2 cut(s) 42, 666
GluI GCNGC 4 cut(s) 94, 204, 709, 717
GsuI CTGGAG 2 cut(s) 782, 1092
HaeIII GGCC 4 cut(s) 113, 448, 912, 1088
HapII CCGG 3 cut(s) 59, 108, 114
HgaI GACGC 1 cut(s) 608
HhaI GCGC 2 cut(s) 43, 667
Hin1II CATG 9 cut(s) 35, 139, 340, 487, 583, 626, 877, 1016, 1151
Hin6I GCGC 2 cut(s) 41, 665
HinP1I GCGC 2 cut(s) 41, 665
HincII GTYRAC 2 cut(s) 978, 1119
HindII GTYRAC 2 cut(s) 978, 1119
HinfI GANTC 4 cut(s) 117, 156, 332, 599
HpaI GTTAAC 1 cut(s) 1119
HpaII CCGG 3 cut(s) 59, 108, 114
Hpy166II GTNNAC 2 cut(s) 978, 1119
Hpy188I TCNGA 5 cut(s) 104, 122, 127, 304, 604
Hpy188III TCNNGA 7 cut(s) 265, 329, 484, 623, 956, 1073, 1109
Hpy8I GTNNAC 2 cut(s) 978, 1119
Hpy99I CGWCG 2 cut(s) 462, 1023
HpyAV CCTTC 6 cut(s) 236, 483, 538, 769, 1106, 1146
HpyCH4III ACNGT 1 cut(s) 553
HpyCH4IV ACGT 1 cut(s) 974
HpyCH4V TGCA 9 cut(s) 275, 377, 386, 432, 686, 719, 768, 817, 965
HpyF10VI GCNNNNNNNGC 5 cut(s) 90, 203, 383, 445, 468
HpyF3I CTNAG 2 cut(s) 885, 1090
HpySE526I ACGT 1 cut(s) 974
Hsp92II CATG 9 cut(s) 35, 139, 340, 487, 583, 626, 877, 1016, 1151
HspAI GCGC 2 cut(s) 41, 665
KspAI GTTAAC 1 cut(s) 1119
Kzo9I GATC 9 cut(s) 51, 104, 122, 245, 304, 325, 742, 932, 1141
LmnI GCTCC 2 cut(s) 139, 1037
Lsp1109I GCAGC 2 cut(s) 190, 703
LweI GCATC 2 cut(s) 364, 1124
MaeI CTAG 3 cut(s) 329, 570, 1047
MaeII ACGT 1 cut(s) 974
MaeIII GTNAC 3 cut(s) 17, 838, 1157
MalI GATC 9 cut(s) 53, 106, 124, 247, 306, 327, 744, 934, 1143
MboI GATC 9 cut(s) 51, 104, 122, 245, 304, 325, 742, 932, 1141
MflI RGATCY 4 cut(s) 51, 104, 122, 245
MhlI GDGCHC 1 cut(s) 450
MlyI GAGTC 1 cut(s) 111
MroXI GAANNNNTTC 3 cut(s) 553, 728, 1068
MseI TTAA 6 cut(s) 290, 350, 696, 806, 938, 1118
MspA1I CMGCKG 2 cut(s) 9, 1172
MspCI CTTAAG 1 cut(s) 349
MspI CCGG 3 cut(s) 59, 108, 114
MspR9I CCNGG 4 cut(s) 109, 800, 821, 1085
MvaI CCWGG 3 cut(s) 800, 821, 1085
MvnI CGCG 1 cut(s) 41
MwoI GCNNNNNNNGC 5 cut(s) 90, 203, 383, 445, 468
NciI CCSGG 1 cut(s) 109
NdeII GATC 9 cut(s) 51, 104, 122, 245, 304, 325, 742, 932, 1141
NlaIII CATG 9 cut(s) 35, 139, 340, 487, 583, 626, 877, 1016, 1151
NlaIV GGNNCC 7 cut(s) 13, 80, 106, 112, 124, 263, 448
NmuCI GTSAC 2 cut(s) 17, 838
NspI RCATGY 1 cut(s) 1016
NspV TTCGAA 1 cut(s) 1062
PaeI GCATGC 1 cut(s) 1016
PagI TCATGA 2 cut(s) 483, 622
PdmI GAANNNNTTC 3 cut(s) 553, 728, 1068
PfeI GAWTC 3 cut(s) 156, 332, 599
PflFI GACNNNGTC 1 cut(s) 1079
PfoI TCCNGGA 1 cut(s) 798
PkrI GCNGC 4 cut(s) 95, 205, 710, 718
PleI GAGTC 1 cut(s) 111
PpsI GAGTC 1 cut(s) 111
PshBI ATTAAT 1 cut(s) 806
Psp6I CCWGG 3 cut(s) 798, 819, 1083
PspEI GGTNACC 1 cut(s) 1157
PspGI CCWGG 3 cut(s) 798, 819, 1083
PspN4I GGNNCC 7 cut(s) 13, 80, 106, 112, 124, 263, 448
PspOMI GGGCCC 1 cut(s) 446
PspPI GGNCC 6 cut(s) 12, 79, 111, 262, 446, 447
PstI CTGCAG 1 cut(s) 688
PsuI RGATCY 4 cut(s) 51, 104, 122, 245
PsyI GACNNNGTC 1 cut(s) 1079
PvuII CAGCTG 1 cut(s) 1172
RsaI GTAC 2 cut(s) 5, 704
RsaNI GTAC 2 cut(s) 4, 703
SaqAI TTAA 6 cut(s) 290, 350, 696, 806, 938, 1118
SatI GCNGC 4 cut(s) 94, 204, 709, 717
Sau3AI GATC 9 cut(s) 51, 104, 122, 245, 304, 325, 742, 932, 1141
Sau96I GGNCC 6 cut(s) 12, 79, 111, 262, 446, 447
SbfI CCTGCAGG 1 cut(s) 688
SchI GAGTC 1 cut(s) 111
ScrFI CCNGG 4 cut(s) 109, 800, 821, 1085
SdaI CCTGCAGG 1 cut(s) 688
SduI GDGCHC 1 cut(s) 450
SfaNI GCATC 2 cut(s) 364, 1124
SfcI CTRYAG 1 cut(s) 684
SfuI TTCGAA 1 cut(s) 1062
SinI GGWCC 3 cut(s) 12, 79, 262
SmlI CTYRAG 1 cut(s) 349
SmoI CTYRAG 1 cut(s) 349
SphI GCATGC 1 cut(s) 1016
Sse8387I CCTGCAGG 1 cut(s) 688
SsiI CCGC 6 cut(s) 9, 39, 82, 91, 94, 709
SspMI CTAG 3 cut(s) 329, 570, 1047
StyD4I CCNGG 4 cut(s) 107, 798, 819, 1083
StyI CCWWGG 1 cut(s) 907
TaaI ACNGT 1 cut(s) 553
TaiI ACGT 1 cut(s) 977
TaqI TCGA 3 cut(s) 955, 1062, 1132
TatI WGTACW 2 cut(s) 3, 702
TauI GCSGC 2 cut(s) 96, 711
TfiI GAWTC 3 cut(s) 156, 332, 599
Tru1I TTAA 6 cut(s) 290, 350, 696, 806, 938, 1118
Tru9I TTAA 6 cut(s) 290, 350, 696, 806, 938, 1118
TscAI CASTG 3 cut(s) 22, 564, 847
TseFI GTSAC 2 cut(s) 17, 838
TseI GCWGC 2 cut(s) 203, 716
Tsp45I GTSAC 2 cut(s) 17, 838
TspDTI ATGAA 7 cut(s) 410, 417, 472, 500, 516, 639, 1136
TspRI CASTG 3 cut(s) 22, 564, 847
Tth111I GACNNNGTC 1 cut(s) 1079
Vha464I CTTAAG 1 cut(s) 349
VpaK11BI GGWCC 3 cut(s) 12, 79, 262
VspI ATTAAT 1 cut(s) 806
XagI CCTNNNNNAGG 1 cut(s) 240
XapI RAATTY 2 cut(s) 478, 1042
XbaI TCTAGA 1 cut(s) 328
XceI RCATGY 1 cut(s) 1016
XmnI GAANNNNTTC 3 cut(s) 553, 728, 1068
XspI CTAG 3 cut(s) 329, 570, 1047
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.