Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0011013

Physical Location & Seq

Genomic Coordinates Forward (+)

30209046 .. 30218698

Gene Structure 9653 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0171800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGACGTCGTCGTCGGTTTTTCTCCGTCTTCTGCTTCTGTTATCTCTCACTGCTCTATCGTTCGCCGACAATTCAAAAGACTACATCTTGGGCAAGGATTCCACCCCCAACAAACCCTCCTGCAACAACCCTTACCTAATGGTGAAGGTGAAAAGGTGGGTTAATGGCGACGAAGGCAAAACTGTTAAGGGGGTTGGTGCAAAATTTGGGGCTTTGTTACCTTCTAAACTTGAAAAAGCTGTCAAATTTCCTGTTGTTCTCTCCAAACCCTTCAATGGCTGCTCCAAATCCTCTTCTCAGTTATCTGGAGCTATTGCCTTGTCCACACGCGGTGATTGTGACTTCTCCGTTAAGGCACAAGTTGCACAAGCCGGAGGTGCTAAGGGGTTGTTGGTGATGAATAATGAAGAAGACCTTGCCATGATGGGCTGTCCTGCGAACGGCACTTTGGATGTTTCAATATTTGTTGCAATGATTCAAAAGTCAGACGGAGAACATCTCAAGAAATCTGTTGAAGATGGAAATAAAGTGGAGCTTCTATTATATTCTCCCAAGCGTCCGGTGGTGGACTTTGGAGTTGCGTTTTTATGGCTGATGGCTGTTGGAACGATAAAAATGGCCTCATATTGGAAAACGATTACTGTTGTCGAGCAAAATGATGACCCTTACAAAGAACTAGCAGAAAAGGATTCTATGAGAACAGCGAAAGAAGATTCTGAGGACGAAACCATGGTTCTTAATGTGGCAGGTGCTGTGTGTTTTGTCATAACAGCATCCACTTTTCTGTTGCTACTATACTTTTTTATGTCTACGTGGTTTGTGTGGGTGCTGATCGTACTTTTCTGCATTGGCGGTATTCAGGGAATGCATAATGTTATCTCAAGCCTGATTTTGAGAACATGGAAAAGCGGTGGACGGAAGGGAATACATGTGCCTATTTTTGAAGAGGTCTCTTATCTCTCGCTTGTTATATTGCTCGTCTCTGTGGCATTTGCAATTTTCTGGTGTGTAACGCGGCGGGAATCATATTCCTGGATTGGCCAAGATGTTCTTGGTATCTGCTTGATGATAACAGTCTTGCAAATCGCTCAATTACCTAACATCAAGGTTGCTACAGTACTACTATGTTGTGCATTTCTCTACGACATCTTTTGGGTATTCGTGTCACCCTTATTCTTTAAAGACAGCGTCATGATTGCGGTTGCTAGAGGTGACAATGCTGGTGGTGAAGCCCTACCAATGCTTTTGAGAATCCCTAAATTTTATGACCCCTGGGGTGGTCAGAATATGATTGGCTTTGGGGACATTCTGTTTCCGGGTTTGCTTATTTTATTTACTTTCAGATTTGACAAAGAAAACAAGAAGAGTATGATCAATGGGTATTTTCTATGGTTGCTAATTGGCTATGGAATGGGGCTTTTTTTTACGTACTTGGGCTTGTACCTCATGAATGGCAATGGTCAGCCTGCACTCCTCTATCTTGTTCCATGCACACTAGGTGTTACAGTGATTTTGGGTTTGATAAGAGGTGAGCTGAAAGAACTTTGGAGTTATGGCACAGTGCGTTATCCAACTCTGGGTGATTCTGGACAAGACAATAGATCAGTGAGAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000281 GO:0000902 GO:0000910 GO:0000911 GO:0000913 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005819 GO:0005856 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0008150 GO:0009524 GO:0009653 GO:0009826 GO:0009987 GO:0015630 GO:0016043 GO:0016049 GO:0022402 GO:0022607 GO:0030865 GO:0032502 GO:0032506 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0051301 GO:0060560 GO:0061640 GO:0071840 GO:1902410 GO:1903047

KEGG Pathways

Metabolic & Signaling

ko03015 ko04071 ko04151 ko04152 ko04261 ko04728 ko05165 map03015 map04071 map04151 map04152 map04261 map04728 map05165

Pfam Domains

Protein Families

EF-hand_7

Protein Analysis

538

Amino Acids

59.39

Weight (kDa)

8.48

Isoelectric Point (pI)

34.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PA	PF02225	81 - 167	2.3e-14	PA domain
Peptidase_A22B	PF04258	240 - 520	2.4e-94	Signal peptide peptidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011013)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18580
fragaria_vesca	FvH4_4g17580 FvH4_4g17580
malus_domestica	MD13G1171500.v1.1 MD16G1173200.v1.1
prunus_persica	Prupe.1G140000_v2.0.a1 Prupe.1G140000_v2.0.a1
pyrus_communis	pycom13g14720 pycom16g14520
rosa_chinensis	RchiOBHm_Chr4g0421481
rosa_laevigata	RLG00000007676
rosa_multiflora	Rmu_sc0001962.1_g000024
rosa_roxburghii	Rroxscaffold_5G00363740
rosa_rugosa	Rorug04G0171800 Rorug04G0171900
rosa_samantha	Rh4AG232400 Rh4BG235200 Rh4CG246700 Rh4DG230900
rosa_wichuraiana	Rw4G020170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	737
AasI	GACNNNNNNGTC	1 cut(s)	10
AatII	GACGTC	1 cut(s)	8
Acc36I	ACCTGC	1 cut(s)	737
AccI	GTMKAC	1 cut(s)	809
AccII	CGCG	2 cut(s)	330, 1015
AciI	CCGC	6 cut(s)	330, 852, 909, 1015, 1018, 1199
AcoI	YGGCCR	1 cut(s)	1039
AcsI	RAATTY	3 cut(s)	203, 245, 1259
AcyI	GRCGYC	1 cut(s)	5
AdeI	CACNNNGTG	2 cut(s)	332, 1499
AfaI	GTAC	4 cut(s)	837, 1119, 1430, 1442
AfiI	CCNNNNNNNGG	5 cut(s)	275, 440, 627, 1277, 1577
AflIII	ACRYGT	1 cut(s)	928
AgsI	TTSAA	7 cut(s)	75, 233, 274, 459, 479, 515, 944
AjnI	CCWGG	2 cut(s)	1031, 1271
AjuI	GAANNNNNNNTTGG	2 cut(s)	431, 463
AluBI	AGCT	4 cut(s)	239, 311, 535, 1534
AluI	AGCT	4 cut(s)	239, 311, 535, 1534
Alw26I	GTCTC	2 cut(s)	955, 985
AlwNI	CAGNNNCTG	1 cut(s)	752
AoxI	GGCC	2 cut(s)	618, 1039
ApeKI	GCWGC	1 cut(s)	279
ApoI	RAATTY	3 cut(s)	203, 245, 1259
AsuC2I	CCSGG	1 cut(s)	1317
AsuHPI	GGTGA	9 cut(s)	154, 160, 344, 406, 1158, 1223, 1238, 1541, 1592
BalI	TGGCCA	1 cut(s)	1041
BbsI	GAAGAC	2 cut(s)	20, 417
BbvI	GCAGC	1 cut(s)	266
BccI	CCATC	3 cut(s)	418, 512, 589
BceAI	ACGGC	1 cut(s)	457
BciT130I	CCWGG	2 cut(s)	1033, 1273
BclI	TGATCA	1 cut(s)	1371
BcnI	CCSGG	1 cut(s)	1317
BcoDI	GTCTC	2 cut(s)	955, 985
BfaI	CTAG	3 cut(s)	677, 1206, 1496
BfmI	CTRYAG	1 cut(s)	1113
BfuAI	ACCTGC	1 cut(s)	737
BisI	GCNGC	2 cut(s)	280, 1016
BlsI	GCNGC	2 cut(s)	281, 1017
BmcAI	AGTACT	1 cut(s)	1119
Bme1390I	CCNGG	3 cut(s)	1033, 1273, 1317
BmrFI	CCNGG	3 cut(s)	1033, 1273, 1317
BmsI	GCATC	1 cut(s)	782
BpiI	GAAGAC	2 cut(s)	20, 417
BplI	GAGNNNNNCTC	2 cut(s)	483, 515
BpmI	CTGGAG	1 cut(s)	327
Bpu10I	CCTNAGC	1 cut(s)	381
BpuEI	CTTGAG	2 cut(s)	485, 865
BpuMI	CCSGG	1 cut(s)	1317
BsaAI	YACGTR	2 cut(s)	813, 1428
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	955
BsaJI	CCNNGG	3 cut(s)	729, 1271, 1272
BsaWI	WCCGGW	1 cut(s)	559
BsaXI	ACNNNNNCTCC	2 cut(s)	101, 131
Bsc4I	CCNNNNNNNGG	5 cut(s)	275, 440, 627, 1277, 1577
Bse3DI	GCAATG	2 cut(s)	477, 1462
BseBI	CCWGG	2 cut(s)	1033, 1273
BseDI	CCNNGG	3 cut(s)	729, 1271, 1272
BseGI	GGATG	2 cut(s)	457, 773
BseLI	CCNNNNNNNGG	5 cut(s)	275, 440, 627, 1277, 1577
BseMI	GCAATG	2 cut(s)	477, 1462
BseMII	CTCAG	2 cut(s)	311, 708
BseRI	GAGGAG	1 cut(s)	1463
BseXI	GCAGC	1 cut(s)	266
BsgI	GTGCAG	1 cut(s)	1452
Bsh1236I	CGCG	2 cut(s)	330, 1015
BshFI	GGCC	2 cut(s)	620, 1041
BsiSI	CCGG	3 cut(s)	372, 560, 1316
BslFI	GGGAC	1 cut(s)	1316
BslI	CCNNNNNNNGG	5 cut(s)	275, 440, 627, 1277, 1577
BsmAI	GTCTC	2 cut(s)	955, 985
BsmBI	CGTCTC	1 cut(s)	985
BsmFI	GGGAC	1 cut(s)	1316
BsmI	GAATGC	1 cut(s)	870
BsnI	GGCC	2 cut(s)	620, 1041
Bso31I	GGTCTC	1 cut(s)	955
Bsp143I	GATC	3 cut(s)	831, 1371, 1601
Bsp19I	CCATGG	1 cut(s)	729
BspACI	CCGC	6 cut(s)	330, 852, 909, 1015, 1018, 1199
BspANI	GGCC	2 cut(s)	620, 1041
BspCNI	CTCAG	2 cut(s)	310, 709
BspFNI	CGCG	2 cut(s)	330, 1015
BspHI	TCATGA	2 cut(s)	1191, 1446
BspMI	ACCTGC	1 cut(s)	737
BspTNI	GGTCTC	1 cut(s)	955
BsrDI	GCAATG	2 cut(s)	477, 1462
BssECI	CCNNGG	3 cut(s)	729, 1271, 1272
BssMI	GATC	3 cut(s)	831, 1371, 1601
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	1 cut(s)	729
Bst2UI	CCWGG	2 cut(s)	1033, 1273
Bst4CI	ACNGT	6 cut(s)	184, 643, 1075, 1117, 1507, 1561
Bst6I	CTCTTC	3 cut(s)	298, 939, 1358
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	1 cut(s)	362
BstBAI	YACGTR	2 cut(s)	813, 1428
BstC8I	GCNNGC	1 cut(s)	1467
BstDEI	CTNAG	3 cut(s)	297, 381, 717
BstDSI	CCRYGG	1 cut(s)	729
BstF5I	GGATG	2 cut(s)	457, 773
BstFNI	CGCG	2 cut(s)	330, 1015
BstKTI	GATC	3 cut(s)	834, 1374, 1604
BstMAI	GTCTC	2 cut(s)	955, 985
BstMBI	GATC	3 cut(s)	831, 1371, 1601
BstMWI	GCNNNNNNNGC	3 cut(s)	174, 362, 377
BstNI	CCWGG	2 cut(s)	1033, 1273
BstNSI	RCATGY	1 cut(s)	932
BstSCI	CCNGG	3 cut(s)	1031, 1271, 1315
BstSFI	CTRYAG	1 cut(s)	1113
BstSNI	TACGTA	1 cut(s)	1428
BstUI	CGCG	2 cut(s)	330, 1015
BstV1I	GCAGC	1 cut(s)	266
BstV2I	GAAGAC	2 cut(s)	20, 417
BsuRI	GGCC	2 cut(s)	620, 1041
BtgI	CCRYGG	1 cut(s)	729
BtsCI	GGATG	2 cut(s)	457, 773
BtsI	GCAGTG	1 cut(s)	48
BtsIMutI	CAGTG	4 cut(s)	48, 1512, 1566, 1611
BveI	ACCTGC	1 cut(s)	737
Cac8I	GCNNGC	1 cut(s)	1467
CaiI	CAGNNNCTG	1 cut(s)	752
CciI	TCATGA	2 cut(s)	1191, 1446
CseI	GACGC	2 cut(s)	545, 1177
Csp6I	GTAC	4 cut(s)	836, 1118, 1429, 1441
CspCI	CAANNNNNGTGG	2 cut(s)	1204, 1239
CviAII	CATG	7 cut(s)	421, 730, 900, 929, 1192, 1447, 1488
CviQI	GTAC	4 cut(s)	836, 1118, 1429, 1441
DdeI	CTNAG	3 cut(s)	297, 381, 717
DpnI	GATC	3 cut(s)	833, 1373, 1603
DpnII	GATC	3 cut(s)	831, 1371, 1601
DraI	TTTAAA	1 cut(s)	1180
DraIII	CACNNNGTG	2 cut(s)	332, 1499
DrdI	GACNNNNNNGTC	1 cut(s)	10
DseDI	GACNNNNNNGTC	1 cut(s)	10
EaeI	YGGCCR	1 cut(s)	1039
Eam1104I	CTCTTC	3 cut(s)	298, 939, 1358
EarI	CTCTTC	3 cut(s)	298, 939, 1358
Eco105I	TACGTA	1 cut(s)	1428
Eco130I	CCWWGG	1 cut(s)	729
Eco31I	GGTCTC	1 cut(s)	955
EcoRII	CCWGG	2 cut(s)	1031, 1271
EcoT14I	CCWWGG	1 cut(s)	729
EcoT22I	ATGCAT	1 cut(s)	870
ErhI	CCWWGG	1 cut(s)	729
Esp3I	CGTCTC	1 cut(s)	985
FaeI	CATG	7 cut(s)	424, 733, 903, 932, 1195, 1450, 1491
FalI	AAGNNNNNCTT	6 cut(s)	399, 431, 519, 551, 1035, 1067
FaqI	GGGAC	1 cut(s)	1316
FatI	CATG	7 cut(s)	420, 729, 899, 928, 1191, 1446, 1487
FauI	CCCGC	1 cut(s)	1011
FbaI	TGATCA	1 cut(s)	1371
FblI	GTMKAC	1 cut(s)	809
Fnu4HI	GCNGC	2 cut(s)	280, 1016
FokI	GGATG	2 cut(s)	464, 760
Fsp4HI	GCNGC	2 cut(s)	280, 1016
FspBI	CTAG	3 cut(s)	677, 1206, 1496
GluI	GCNGC	2 cut(s)	280, 1016
GsuI	CTGGAG	1 cut(s)	327
HaeIII	GGCC	2 cut(s)	620, 1041
HapII	CCGG	3 cut(s)	372, 560, 1316
HgaI	GACGC	2 cut(s)	545, 1177
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	7 cut(s)	424, 733, 903, 932, 1195, 1450, 1491
HinfI	GANTC	7 cut(s)	98, 475, 689, 713, 1022, 1251, 1583
HpaII	CCGG	3 cut(s)	372, 560, 1316
HphI	GGTGA	9 cut(s)	154, 160, 344, 406, 1158, 1223, 1238, 1541, 1592
Hpy166II	GTNNAC	4 cut(s)	324, 568, 810, 914
Hpy188I	TCNGA	4 cut(s)	487, 718, 1284, 1343
Hpy188III	TCNNGA	5 cut(s)	306, 502, 1192, 1447, 1587
Hpy8I	GTNNAC	4 cut(s)	324, 568, 810, 914
Hpy99I	CGWCG	4 cut(s)	10, 13, 16, 173
HpyAV	CCTTC	5 cut(s)	139, 167, 231, 280, 913
HpyCH4III	ACNGT	6 cut(s)	184, 643, 1075, 1117, 1507, 1561
HpyCH4IV	ACGT	3 cut(s)	5, 812, 1427
HpyF10VI	GCNNNNNNNGC	3 cut(s)	174, 362, 377
HpyF3I	CTNAG	3 cut(s)	297, 381, 717
HpySE526I	ACGT	3 cut(s)	5, 812, 1427
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	7 cut(s)	424, 733, 903, 932, 1195, 1450, 1491
Ksp22I	TGATCA	1 cut(s)	1371
Kzo9I	GATC	3 cut(s)	831, 1371, 1601
LmnI	GCTCC	3 cut(s)	287, 308, 532
Lsp1109I	GCAGC	1 cut(s)	266
LweI	GCATC	1 cut(s)	782
MaeI	CTAG	3 cut(s)	677, 1206, 1496
MaeII	ACGT	3 cut(s)	5, 812, 1427
MaeIII	GTNAC	6 cut(s)	216, 338, 1009, 1164, 1211, 1501
MalI	GATC	3 cut(s)	833, 1373, 1603
MboI	GATC	3 cut(s)	831, 1371, 1601
MboII	GAAGA	8 cut(s)	20, 285, 419, 422, 527, 722, 956, 1375
MlsI	TGGCCA	1 cut(s)	1041
MluCI	AATT	7 cut(s)	70, 203, 245, 996, 1091, 1259, 1398
MluNI	TGGCCA	1 cut(s)	1041
MmeI	TCCRAC	2 cut(s)	583, 1595
Mox20I	TGGCCA	1 cut(s)	1041
Mph1103I	ATGCAT	1 cut(s)	870
MscI	TGGCCA	1 cut(s)	1041
MseI	TTAA	5 cut(s)	162, 186, 351, 738, 1179
Msp20I	TGGCCA	1 cut(s)	1041
MspI	CCGG	3 cut(s)	372, 560, 1316
MspR9I	CCNGG	3 cut(s)	1033, 1273, 1317
Mva1269I	GAATGC	1 cut(s)	870
MvaI	CCWGG	2 cut(s)	1033, 1273
MvnI	CGCG	2 cut(s)	330, 1015
MwoI	GCNNNNNNNGC	3 cut(s)	174, 362, 377
NciI	CCSGG	1 cut(s)	1317
NcoI	CCATGG	1 cut(s)	729
NdeII	GATC	3 cut(s)	831, 1371, 1601
NlaIII	CATG	7 cut(s)	424, 733, 903, 932, 1195, 1450, 1491
NmuCI	GTSAC	3 cut(s)	338, 1164, 1211
NsiI	ATGCAT	1 cut(s)	870
NspI	RCATGY	1 cut(s)	932
PagI	TCATGA	2 cut(s)	1191, 1446
PaqCI	CACCTGC	1 cut(s)	737
PasI	CCCWGGG	1 cut(s)	1272
PciI	ACATGT	1 cut(s)	928
PctI	GAATGC	1 cut(s)	870
PfeI	GAWTC	7 cut(s)	98, 475, 689, 713, 1022, 1251, 1583
PflFI	GACNNNGTC	2 cut(s)	7, 1187
PfoI	TCCNGGA	1 cut(s)	1031
PkrI	GCNGC	2 cut(s)	281, 1017
Ppu21I	YACGTR	2 cut(s)	813, 1428
PscI	ACATGT	1 cut(s)	928
Psp6I	CCWGG	2 cut(s)	1031, 1271
PspGI	CCWGG	2 cut(s)	1031, 1271
PstNI	CAGNNNCTG	1 cut(s)	752
PsyI	GACNNNGTC	2 cut(s)	7, 1187
RsaI	GTAC	4 cut(s)	837, 1119, 1430, 1442
RsaNI	GTAC	4 cut(s)	836, 1118, 1429, 1441
SaqAI	TTAA	5 cut(s)	162, 186, 351, 738, 1179
SatI	GCNGC	2 cut(s)	280, 1016
Sau3AI	GATC	3 cut(s)	831, 1371, 1601
ScaI	AGTACT	1 cut(s)	1119
ScrFI	CCNGG	3 cut(s)	1033, 1273, 1317
SfaNI	GCATC	1 cut(s)	782
SfcI	CTRYAG	1 cut(s)	1113
SmlI	CTYRAG	2 cut(s)	500, 880
SmoI	CTYRAG	2 cut(s)	500, 880
SnaBI	TACGTA	1 cut(s)	1428
Sse9I	AATT	7 cut(s)	70, 203, 245, 996, 1091, 1259, 1398
SsiI	CCGC	6 cut(s)	330, 852, 909, 1015, 1018, 1199
SspI	AATATT	1 cut(s)	462
SspMI	CTAG	3 cut(s)	677, 1206, 1496
StyD4I	CCNGG	3 cut(s)	1031, 1271, 1315
StyI	CCWWGG	1 cut(s)	729
TaaI	ACNGT	6 cut(s)	184, 643, 1075, 1117, 1507, 1561
TaiI	ACGT	3 cut(s)	8, 815, 1430
TaqI	TCGA	1 cut(s)	648
TasI	AATT	7 cut(s)	70, 203, 245, 996, 1091, 1259, 1398
TatI	WGTACW	1 cut(s)	1117
TauI	GCSGC	1 cut(s)	1018
TfiI	GAWTC	7 cut(s)	98, 475, 689, 713, 1022, 1251, 1583
Tru1I	TTAA	5 cut(s)	162, 186, 351, 738, 1179
Tru9I	TTAA	5 cut(s)	162, 186, 351, 738, 1179
TscAI	CASTG	4 cut(s)	55, 1512, 1566, 1611
TseFI	GTSAC	3 cut(s)	338, 1164, 1211
TseI	GCWGC	1 cut(s)	279
Tsp45I	GTSAC	3 cut(s)	338, 1164, 1211
TspDTI	ATGAA	3 cut(s)	413, 420, 1463
TspGWI	ACGGA	4 cut(s)	14, 337, 504, 931
TspRI	CASTG	4 cut(s)	55, 1512, 1566, 1611
Tth111I	GACNNNGTC	2 cut(s)	7, 1187
XapI	RAATTY	3 cut(s)	203, 245, 1259
XceI	RCATGY	1 cut(s)	932
XcmI	CCANNNNNNNNNTGG	2 cut(s)	559, 1049
XmiI	GTMKAC	1 cut(s)	809
XspI	CTAG	3 cut(s)	677, 1206, 1496
ZraI	GACGTC	1 cut(s)	6
ZrmI	AGTACT	1 cut(s)	1119
Zsp2I	ATGCAT	1 cut(s)	870

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.