Prupe.1G140000_v2.0.a1

serine threonine-protein phosphatase 2A regulatory subunit B'' subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
10991932 .. 10997437
5506 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G140000.1

Sequence Viewer

Length: 1434 bp
ATGTACAGTGGGTCCAGTGATGGCGAAGGCCATGAGGCCGCGCAGAGGAAGATCCCGCCTGCTTCGTCCATGTTGTGGGTTCGGAACCTCCGCCGCTTCATCGGATCCGGTACCGGACTCGGATCCGAAGCTCTCATGGAGCTTGAAACAAAGAGAATCTTGCTTGATATTTTCAAAGAGAAGCAACAAAAAAGTGCTGAAGCTGGCACAATACCAAGTTTCTATAAGAAGAAACCTGAAGATGGATCTATTAGTCACAGGGTCCAGAGGCTGGCAAAATATCGGTTTTTAAAGAAGCAATCAGATCTTTTGCTAAATGCTGATGATCTAGATGCTATGTGGGTTTGCTTAAGGGAAAATTGTGTGATTGATGATGCAACTGGTGCAGAAAAGATGAATTATGAAGACTTTTGCCACATTGCCTCTGTATGTACAGAGCAGATAGGGCCCAAATGCCGTCGCTTTTTCAGCCCTTCCAATTTCATGAAGTTTGAGAAAGACGAACAAGGAAGAATTGCCATTCTGCCCTTTTACCTTTATGTGATGAGAACGGTTTCACTTACCCAAGCTAGAATTGACATGAGCGAGCTTGATGAGGATTCTGATGGTTTCCTTCAACCTCAAGAAATGGAGGCCTATATACGAGGTCTTATACCTAATCTGGCGCAATTACGGGACATGCCTGCAAGCTTTGTTCAAATGTATTGCCGCATAGCTGCGCAGAAGTTCTTTTTCTTCTGCGACCCTCATAGACGAGGAAAAGCGTGCATAAAAAAGGTGTTATTAAGTAATTGTCTCCAGGAACTAATGGAACTGCACCAGGAAAGTGAGGAAGAAGTCACTGACACTGAGCAAGCTGAAAACTGGTTCTCTATGGCATCTGCCAAGCGCGTATGTGACATCTTCATTTTGCTTGATAAAGATAACAATGGAACATTGAGCAAGCAGGAGCTTCGAGAATATGCGGATGGGGCATTGACTGAAATTATCATTGAAAGAGTGTTTGATGAGCATGTTCGACGAGGAAAAGTTGGGGGTGCAAGTTCAAGGGAGATGGACTTTGATAGTTATCTGGACTTTGTTCTGGCCTTAGAAAACAAAGACACTCCAGAAGGGTTAACATATTTGTTTCGATGTCTTGATCTTAACGGGAGGGGTTACCTTACAACAGCTGATATACACTCTCTTTTCAGGGATGTACATCAGAAATGGATCGAGGGTGGAAACTATGAATTGTGTATTGAGGACGTAAGGGACGAAATCTGGGACATGGTTAAGCCAGCTGATCCACTACGGATAACATTGGCTGATTTACTAGCTTGCAAACAAGGTGGCACTGTAGCCAGCATGCTCATAGATGTGCGTGGTTTCTGGGCGCATGACAATAGAGAAAATCTTCTTCAAGAAGAGGAGGAACCCGAAGAAGAATCGTAA

Protein Analysis

478

Amino Acids

54.71

Weight (kDa)

4.93

Isoelectric Point (pI)

53.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0011013)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 720
Acc65I GGTACC 1 cut(s) 110
AccB1I GGYRCC 1 cut(s) 110
AccB7I CCANNNNNTGG 2 cut(s) 75, 271
AccII CGCG 2 cut(s) 41, 891
AciI CCGC 6 cut(s) 39, 56, 91, 94, 709, 965
AclWI GGATC 8 cut(s) 46, 99, 112, 117, 130, 253, 1220, 1280
AcuI CTGAAG 2 cut(s) 219, 258
AfaI GTAC 4 cut(s) 5, 112, 433, 1200
AfiI CCNNNNNNNGG 4 cut(s) 45, 75, 242, 271
AflII CTTAAG 1 cut(s) 349
AgsI TTSAA 7 cut(s) 146, 175, 617, 698, 995, 1047, 1403
AjnI CCWGG 2 cut(s) 798, 819
Alw26I GTCTC 1 cut(s) 800
AlwI GGATC 8 cut(s) 46, 99, 112, 117, 130, 253, 1220, 1280
AlwNI CAGNNNCTG 1 cut(s) 271
AoxI GGCC 5 cut(s) 28, 36, 446, 633, 1086
ApaI GGGCCC 1 cut(s) 450
ApeKI GCWGC 1 cut(s) 716
Asp700I GAANNNNTTC 2 cut(s) 553, 1395
Asp718I GGTACC 1 cut(s) 110
AspLEI GCGC 5 cut(s) 43, 667, 721, 891, 1378
AspS9I GGNCC 4 cut(s) 12, 262, 446, 447
AvaII GGWCC 2 cut(s) 12, 262
BaeGI GKGCMC 1 cut(s) 450
BamHI GGATCC 2 cut(s) 104, 122
BanI GGYRCC 1 cut(s) 110
BanII GRGCYC 1 cut(s) 450
BbsI GAAGAC 1 cut(s) 411
BbvI GCAGC 1 cut(s) 703
BccI CCATC 5 cut(s) 14, 236, 599, 962, 1048
BceAI ACGGC 1 cut(s) 441
BcgI CGANNNNNNTGC 2 cut(s) 935, 969
BciT130I CCWGG 2 cut(s) 800, 821
BcoDI GTCTC 1 cut(s) 800
BfaI CTAG 3 cut(s) 329, 570, 1316
BfmI CTRYAG 1 cut(s) 1338
BfrI CTTAAG 1 cut(s) 349
BglII AGATCT 1 cut(s) 304
BisI GCNGC 4 cut(s) 39, 94, 709, 717
BlsI GCNGC 4 cut(s) 40, 95, 710, 718
Bme1390I CCNGG 2 cut(s) 800, 821
Bme18I GGWCC 2 cut(s) 12, 262
BmgT120I GGNCC 4 cut(s) 12, 262, 446, 447
BmiI GGNNCC 8 cut(s) 13, 86, 106, 112, 124, 263, 448, 1416
BmrFI CCNGG 2 cut(s) 800, 821
BmsI GCATC 3 cut(s) 322, 364, 887
BpiI GAAGAC 1 cut(s) 411
BpmI CTGGAG 2 cut(s) 782, 1092
BpuEI CTTGAG 1 cut(s) 606
BsaBI GATNNNNATC 2 cut(s) 1068, 1200
BsaWI WCCGGW 2 cut(s) 107, 113
Bsc4I CCNNNNNNNGG 4 cut(s) 45, 75, 242, 271
Bse1I ACTGG 3 cut(s) 15, 385, 869
Bse3DI GCAATG 1 cut(s) 417
Bse8I GATNNNNATC 2 cut(s) 1068, 1200
BseBI CCWGG 2 cut(s) 800, 821
BseGI GGATG 2 cut(s) 973, 1201
BseJI GATNNNNATC 2 cut(s) 1068, 1200
BseLI CCNNNNNNNGG 4 cut(s) 45, 75, 242, 271
BseMI GCAATG 1 cut(s) 417
BseMII CTCAG 1 cut(s) 840
BseNI ACTGG 3 cut(s) 15, 385, 869
BseRI GAGGAG 1 cut(s) 1424
BseSI GKGCMC 1 cut(s) 450
BseXI GCAGC 1 cut(s) 703
BsgI GTGCAG 2 cut(s) 405, 800
Bsh1236I CGCG 2 cut(s) 41, 891
BshFI GGCC 5 cut(s) 30, 38, 448, 635, 1088
BshNI GGYRCC 1 cut(s) 110
BsiSI CCGG 2 cut(s) 108, 114
BslFI GGGAC 3 cut(s) 689, 1268, 1280
BslI CCNNNNNNNGG 4 cut(s) 45, 75, 242, 271
BsmAI GTCTC 1 cut(s) 800
BsmFI GGGAC 3 cut(s) 689, 1268, 1280
BsnI GGCC 5 cut(s) 30, 38, 448, 635, 1088
Bsp120I GGGCCC 1 cut(s) 446
Bsp1286I GDGCHC 1 cut(s) 450
Bsp1407I TGTACA 3 cut(s) 3, 431, 1198
Bsp143I GATC 9 cut(s) 51, 104, 122, 245, 304, 325, 1141, 1212, 1285
BspACI CCGC 6 cut(s) 39, 56, 91, 94, 709, 965
BspANI GGCC 5 cut(s) 30, 38, 448, 635, 1088
BspCNI CTCAG 1 cut(s) 841
BspFNI CGCG 2 cut(s) 41, 891
BspHI TCATGA 1 cut(s) 483
BspLI GGNNCC 8 cut(s) 13, 86, 106, 112, 124, 263, 448, 1416
BspPI GGATC 8 cut(s) 46, 99, 112, 117, 130, 253, 1220, 1280
BspT107I GGYRCC 1 cut(s) 110
BspTI CTTAAG 1 cut(s) 349
BsrDI GCAATG 1 cut(s) 417
BsrGI TGTACA 3 cut(s) 3, 431, 1198
BsrI ACTGG 3 cut(s) 15, 385, 869
BssMI GATC 9 cut(s) 51, 104, 122, 245, 304, 325, 1141, 1212, 1285
Bst2UI CCWGG 2 cut(s) 800, 821
Bst4CI ACNGT 3 cut(s) 8, 553, 1339
Bst6I CTCTTC 1 cut(s) 1401
BstAFI CTTAAG 1 cut(s) 349
BstAPI GCANNNNNTGC 1 cut(s) 383
BstAUI TGTACA 3 cut(s) 3, 431, 1198
BstDEI CTNAG 2 cut(s) 849, 1090
BstEII GGTNACC 1 cut(s) 1157
BstF5I GGATG 2 cut(s) 973, 1201
BstFNI CGCG 2 cut(s) 41, 891
BstHHI GCGC 5 cut(s) 43, 667, 721, 891, 1378
BstKTI GATC 9 cut(s) 54, 107, 125, 248, 307, 328, 1144, 1215, 1288
BstMAI GTCTC 1 cut(s) 800
BstMBI GATC 9 cut(s) 51, 104, 122, 245, 304, 325, 1141, 1212, 1285
BstMWI GCNNNNNNNGC 4 cut(s) 383, 445, 468, 971
BstNI CCWGG 2 cut(s) 800, 821
BstNSI RCATGY 3 cut(s) 682, 1016, 1351
BstPI GGTNACC 1 cut(s) 1157
BstSCI CCNGG 2 cut(s) 798, 819
BstSFI CTRYAG 1 cut(s) 1338
BstSLI GKGCMC 1 cut(s) 450
BstUI CGCG 2 cut(s) 41, 891
BstV1I GCAGC 1 cut(s) 703
BstV2I GAAGAC 1 cut(s) 411
BstX2I RGATCY 5 cut(s) 51, 104, 122, 245, 304
BstYI RGATCY 5 cut(s) 51, 104, 122, 245, 304
BsuRI GGCC 5 cut(s) 30, 38, 448, 635, 1088
BtsCI GGATG 2 cut(s) 973, 1201
BtsIMutI CAGTG 5 cut(s) 13, 22, 840, 846, 1335
CaiI CAGNNNCTG 1 cut(s) 271
CciI TCATGA 1 cut(s) 483
CfoI GCGC 5 cut(s) 43, 667, 721, 891, 1378
Cfr13I GGNCC 4 cut(s) 12, 262, 446, 447
Csp6I GTAC 4 cut(s) 4, 111, 432, 1199
CspCI CAANNNNNGTGG 2 cut(s) 1312, 1347
CviQI GTAC 4 cut(s) 4, 111, 432, 1199
DdeI CTNAG 2 cut(s) 849, 1090
DpnI GATC 9 cut(s) 53, 106, 124, 247, 306, 327, 1143, 1214, 1287
DpnII GATC 9 cut(s) 51, 104, 122, 245, 304, 325, 1141, 1212, 1285
DraI TTTAAA 1 cut(s) 291
Eam1104I CTCTTC 1 cut(s) 1401
EarI CTCTTC 1 cut(s) 1401
EciI GGCGGA 1 cut(s) 80
Eco147I AGGCCT 1 cut(s) 635
Eco24I GRGCYC 1 cut(s) 450
Eco47I GGWCC 2 cut(s) 12, 262
Eco57I CTGAAG 2 cut(s) 219, 258
Eco91I GGTNACC 1 cut(s) 1157
EcoO109I RGGNCCY 1 cut(s) 446
EcoO65I GGTNACC 1 cut(s) 1157
EcoRII CCWGG 2 cut(s) 798, 819
EcoT38I GRGCYC 1 cut(s) 450
FalI AAGNNNNNCTT 2 cut(s) 143, 175
FaqI GGGAC 3 cut(s) 689, 1268, 1280
FauI CCCGC 1 cut(s) 63
Fnu4HI GCNGC 4 cut(s) 39, 94, 709, 717
FokI GGATG 2 cut(s) 980, 1208
FriOI GRGCYC 1 cut(s) 450
Fsp4HI GCNGC 4 cut(s) 39, 94, 709, 717
FspBI CTAG 3 cut(s) 329, 570, 1316
FspI TGCGCA 1 cut(s) 720
GlaI GCGC 5 cut(s) 42, 666, 720, 890, 1377
GluI GCNGC 4 cut(s) 39, 94, 709, 717
GsuI CTGGAG 2 cut(s) 782, 1092
HaeIII GGCC 5 cut(s) 30, 38, 448, 635, 1088
HapII CCGG 2 cut(s) 108, 114
HhaI GCGC 5 cut(s) 43, 667, 721, 891, 1378
Hin6I GCGC 5 cut(s) 41, 665, 719, 889, 1376
HinP1I GCGC 5 cut(s) 41, 665, 719, 889, 1376
HincII GTYRAC 1 cut(s) 1119
HindII GTYRAC 1 cut(s) 1119
HindIII AAGCTT 1 cut(s) 688
HinfI GANTC 4 cut(s) 117, 156, 599, 1427
HpaI GTTAAC 1 cut(s) 1119
HpaII CCGG 2 cut(s) 108, 114
Hpy166II GTNNAC 1 cut(s) 1119
Hpy188I TCNGA 7 cut(s) 84, 104, 122, 127, 304, 604, 1206
Hpy188III TCNNGA 9 cut(s) 265, 329, 484, 623, 956, 1073, 1109, 1139, 1403
Hpy8I GTNNAC 1 cut(s) 1119
Hpy99I CGWCG 2 cut(s) 462, 1023
HpyAV CCTTC 4 cut(s) 20, 483, 623, 1106
HpyCH4III ACNGT 3 cut(s) 8, 553, 1339
HpyCH4IV ACGT 1 cut(s) 1248
HpyCH4V TGCA 7 cut(s) 377, 386, 686, 768, 817, 1040, 1323
HpyF10VI GCNNNNNNNGC 4 cut(s) 383, 445, 468, 971
HpyF3I CTNAG 2 cut(s) 849, 1090
HpySE526I ACGT 1 cut(s) 1248
HspAI GCGC 5 cut(s) 41, 665, 719, 889, 1376
KpnI GGTACC 1 cut(s) 114
KspAI GTTAAC 1 cut(s) 1119
Kzo9I GATC 9 cut(s) 51, 104, 122, 245, 304, 325, 1141, 1212, 1285
LmnI GCTCC 2 cut(s) 139, 949
Lsp1109I GCAGC 1 cut(s) 703
LweI GCATC 3 cut(s) 322, 364, 887
MaeI CTAG 3 cut(s) 329, 570, 1316
MaeII ACGT 1 cut(s) 1248
MaeIII GTNAC 4 cut(s) 254, 838, 896, 1157
MalI GATC 9 cut(s) 53, 106, 124, 247, 306, 327, 1143, 1214, 1287
MboI GATC 9 cut(s) 51, 104, 122, 245, 304, 325, 1141, 1212, 1285
MflI RGATCY 5 cut(s) 51, 104, 122, 245, 304
MhlI GDGCHC 1 cut(s) 450
MluCI AATT 9 cut(s) 358, 397, 478, 513, 573, 668, 790, 984, 1232
MlyI GAGTC 1 cut(s) 111
MroXI GAANNNNTTC 2 cut(s) 553, 1395
MseI TTAA 6 cut(s) 290, 350, 785, 1118, 1146, 1275
MslI CAYNNNNRTG 1 cut(s) 1358
MspA1I CMGCKG 2 cut(s) 1172, 1283
MspCI CTTAAG 1 cut(s) 349
MspI CCGG 2 cut(s) 108, 114
MspR9I CCNGG 2 cut(s) 800, 821
MvaI CCWGG 2 cut(s) 800, 821
MvnI CGCG 2 cut(s) 41, 891
MwoI GCNNNNNNNGC 4 cut(s) 383, 445, 468, 971
NdeII GATC 9 cut(s) 51, 104, 122, 245, 304, 325, 1141, 1212, 1285
NlaIV GGNNCC 8 cut(s) 13, 86, 106, 112, 124, 263, 448, 1416
NmuCI GTSAC 3 cut(s) 254, 838, 896
NsbI TGCGCA 1 cut(s) 720
NspI RCATGY 3 cut(s) 682, 1016, 1351
PaeI GCATGC 1 cut(s) 1351
PagI TCATGA 1 cut(s) 483
PceI AGGCCT 1 cut(s) 635
PcsI WCGNNNNNNNCGW 1 cut(s) 1254
PdmI GAANNNNTTC 2 cut(s) 553, 1395
PfeI GAWTC 3 cut(s) 156, 599, 1427
PflMI CCANNNNNTGG 2 cut(s) 75, 271
PfoI TCCNGGA 1 cut(s) 798
PkrI GCNGC 4 cut(s) 40, 95, 710, 718
PleI GAGTC 1 cut(s) 111
PpsI GAGTC 1 cut(s) 111
Psp6I CCWGG 2 cut(s) 798, 819
PspEI GGTNACC 1 cut(s) 1157
PspGI CCWGG 2 cut(s) 798, 819
PspN4I GGNNCC 8 cut(s) 13, 86, 106, 112, 124, 263, 448, 1416
PspOMI GGGCCC 1 cut(s) 446
PspPI GGNCC 4 cut(s) 12, 262, 446, 447
PstNI CAGNNNCTG 1 cut(s) 271
PsuI RGATCY 5 cut(s) 51, 104, 122, 245, 304
PvuII CAGCTG 2 cut(s) 1172, 1283
RsaI GTAC 4 cut(s) 5, 112, 433, 1200
RsaNI GTAC 4 cut(s) 4, 111, 432, 1199
RseI CAYNNNNRTG 1 cut(s) 1358
SaqAI TTAA 6 cut(s) 290, 350, 785, 1118, 1146, 1275
SatI GCNGC 4 cut(s) 39, 94, 709, 717
Sau3AI GATC 9 cut(s) 51, 104, 122, 245, 304, 325, 1141, 1212, 1285
Sau96I GGNCC 4 cut(s) 12, 262, 446, 447
SchI GAGTC 1 cut(s) 111
ScrFI CCNGG 2 cut(s) 800, 821
SduI GDGCHC 1 cut(s) 450
SfaNI GCATC 3 cut(s) 322, 364, 887
SfcI CTRYAG 1 cut(s) 1338
SinI GGWCC 2 cut(s) 12, 262
SmiMI CAYNNNNRTG 1 cut(s) 1358
SmlI CTYRAG 2 cut(s) 349, 621
SmoI CTYRAG 2 cut(s) 349, 621
SphI GCATGC 1 cut(s) 1351
Sse9I AATT 9 cut(s) 358, 397, 478, 513, 573, 668, 790, 984, 1232
SseBI AGGCCT 1 cut(s) 635
SsiI CCGC 6 cut(s) 39, 56, 91, 94, 709, 965
SspMI CTAG 3 cut(s) 329, 570, 1316
StuI AGGCCT 1 cut(s) 635
StyD4I CCNGG 2 cut(s) 798, 819
TaaI ACNGT 3 cut(s) 8, 553, 1339
TaiI ACGT 1 cut(s) 1251
TaqI TCGA 4 cut(s) 955, 1018, 1132, 1215
TasI AATT 9 cut(s) 358, 397, 478, 513, 573, 668, 790, 984, 1232
TatI WGTACW 3 cut(s) 3, 431, 1198
TauI GCSGC 3 cut(s) 41, 96, 711
TfiI GAWTC 3 cut(s) 156, 599, 1427
Tru1I TTAA 6 cut(s) 290, 350, 785, 1118, 1146, 1275
Tru9I TTAA 6 cut(s) 290, 350, 785, 1118, 1146, 1275
TscAI CASTG 5 cut(s) 13, 22, 847, 853, 1342
TseFI GTSAC 3 cut(s) 254, 838, 896
TseI GCWGC 1 cut(s) 716
Tsp45I GTSAC 3 cut(s) 254, 838, 896
TspDTI ATGAA 7 cut(s) 88, 410, 417, 472, 500, 895, 1245
TspGWI ACGGA 1 cut(s) 1309
TspRI CASTG 5 cut(s) 13, 22, 847, 853, 1342
Van91I CCANNNNNTGG 2 cut(s) 75, 271
Vha464I CTTAAG 1 cut(s) 349
VpaK11BI GGWCC 2 cut(s) 12, 262
XbaI TCTAGA 1 cut(s) 328
XceI RCATGY 3 cut(s) 682, 1016, 1351
XmnI GAANNNNTTC 2 cut(s) 553, 1395
XspI CTAG 3 cut(s) 329, 570, 1316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.