RLG00000007676

serine threonine-protein phosphatase 2A regulatory subunit B'' subunit

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
19796329 .. 19801994
5666 bp
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UTR
Exon/CDS
Intron
RLM00000007676

Sequence Viewer

Length: 1434 bp
ATGTACAGCGGGTCCAGTGACGGCGAAAGCCATGAGACCGCGCAGAAGAAGATCCCACCGGCTTCGTCTATGTTGTGGGTCCGCAACCTCCGCCGCTACATCGGATCCGGGGCCGGACTCGGATCCGAAGCCCTCATGGAGCTTGAAACAAAGAGAATCTTGCTCGACATTTTCAAAGAGAAGCAACAAAAAAGTGCTGAAGCTGCCACAATCCCAAGTTTCTATAAGAAGAAACCTGAAGAAGGATCTATTAGTCAAAGGGTCCAGAGGCTTGCAAAATATCGGTTTTTAAAGAAGCAATCTGATCTTTTGCTAAATGCTGATGATCTAGATTCCATGTGGGTTTGCTTAAGGGAAAATTGTGTGATTGATGATGCAACTGGTGCAGAGAAGATGAATTATGAAGACTTCTGCCACATTGCATCTGTATGCACAGAGCAGATAGGGCCCAAATGCCGTCGCTTTTTCAGCCCTTCAAATTTCATGAAGTTTGAGAAAGATGAACAAGGAAGAATTGCCATTCTGCCCTTCTATCTCTATGTGATGAGAACGGTTTCACTGACACAAGCTAGAATTGACATGAGTGAGCTTGATGAGGATTCTGATGGTTTTCTTCAGCGTCATGAAATGGAAGCATATATACGAGGTCTCATACCTAATCTGGCGCAACTACGGGACATGCCTGCAGGATTTCTTAACATGTATTGCCGCATAGCTGCACAGAAGTTCTTCTTCTTTTGTGACCCTCATAGACGAGGAAAAGCCTGCATAAAGAAAGTGTTATTGAGCAATTGTCTCCAGGAATTAATGGAACTGCACCAGGAAAGTGAGGAAGAAGTCACTGACAATGAGCAAGCAGAAAATTGGTTCTCCATGACATCTGCCCAGCGAATATGTGATGTGTTCCTTGGCCTTGATACAGATAATAATGGATCGTTAAGCAAGCAAGAACTTCGAGAATATGCAGATGGGACGTTGACTGAAATCATCATTGAAAGAGTGTTTGATGAGCATGCTCGTCGTGGAAAAATTGGTGGAGCAAATTCTAGGGAAATGGACTTCGAAAGTTTTCTGGACTTTGTCCTGGCCTTAGAAAACAAAGACACTCCAGAAGGGTTAACATATTTGTTTCGATGCCTTGATCTTCATGGAAGGGGTTACCTTACAACAGCTGATATACACTCTCTTTTCAGGGATGTACACCAAAAATGGATTGAGGGTGGAAACTATGAGTTGTGTATTGAGGATGTAAGGGACGAAATCTGGGACATGGTTAAGCCGGCTGATCCACTAAGGATAACATTGGCGGATCTTCTTGCATGCAAACAGGGAGGTACTGTAGCCAGCATGCTCATAGATGTGCGTGGTTTTTGGGCACATGACAATAGGGAAAATCTTCTCCAAGAAGAGGAGGAACCAGAAGAAGAAGCTTAA

Protein Analysis

478

Amino Acids

54.79

Weight (kDa)

4.94

Isoelectric Point (pI)

52.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011013)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 41
AciI CCGC 7 cut(s) 9, 39, 82, 91, 94, 709, 1307
AclWI GGATC 9 cut(s) 46, 99, 112, 117, 130, 253, 940, 1280, 1317
AcsI RAATTY 2 cut(s) 478, 1042
AcuI CTGAAG 3 cut(s) 219, 258, 599
AfaI GTAC 3 cut(s) 5, 1200, 1336
AfiI CCNNNNNNNGG 2 cut(s) 242, 1408
AflII CTTAAG 1 cut(s) 349
AflIII ACRYGT 1 cut(s) 699
AgsI TTSAA 4 cut(s) 146, 175, 477, 995
AjnI CCWGG 3 cut(s) 798, 819, 1083
AluBI AGCT 7 cut(s) 142, 203, 569, 589, 716, 1172, 1430
AluI AGCT 7 cut(s) 142, 203, 569, 589, 716, 1172, 1430
Alw26I GTCTC 3 cut(s) 29, 653, 800
AlwI GGATC 9 cut(s) 46, 99, 112, 117, 130, 253, 940, 1280, 1317
AoxI GGCC 4 cut(s) 111, 446, 910, 1086
ApaI GGGCCC 1 cut(s) 450
ApeKI GCWGC 2 cut(s) 203, 716
ApoI RAATTY 2 cut(s) 478, 1042
AseI ATTAAT 1 cut(s) 806
Asp700I GAANNNNTTC 4 cut(s) 553, 728, 1068, 1395
AspLEI GCGC 2 cut(s) 43, 667
AspS9I GGNCC 6 cut(s) 12, 79, 111, 262, 446, 447
AsuC2I CCSGG 1 cut(s) 109
AsuII TTCGAA 1 cut(s) 1062
AvaII GGWCC 3 cut(s) 12, 79, 262
BaeGI GKGCMC 2 cut(s) 450, 1378
BamHI GGATCC 2 cut(s) 104, 122
BanII GRGCYC 1 cut(s) 450
BarI GAAGNNNNNNTAC 2 cut(s) 624, 656
BbsI GAAGAC 1 cut(s) 411
BbvI GCAGC 2 cut(s) 190, 703
BccI CCATC 2 cut(s) 599, 962
BceAI ACGGC 2 cut(s) 37, 441
BcgI CGANNNNNNTGC 4 cut(s) 935, 969, 1001, 1035
BciT130I CCWGG 3 cut(s) 800, 821, 1085
BcnI CCSGG 1 cut(s) 109
BcoDI GTCTC 3 cut(s) 29, 653, 800
BfaI CTAG 3 cut(s) 329, 570, 1047
BfmI CTRYAG 2 cut(s) 684, 1338
BfrI CTTAAG 1 cut(s) 349
BisI GCNGC 4 cut(s) 94, 204, 709, 717
BlsI GCNGC 4 cut(s) 95, 205, 710, 718
Bme1390I CCNGG 4 cut(s) 109, 800, 821, 1085
Bme18I GGWCC 3 cut(s) 12, 79, 262
BmgT120I GGNCC 6 cut(s) 12, 79, 111, 262, 446, 447
BmiI GGNNCC 8 cut(s) 13, 80, 106, 112, 124, 263, 448, 1416
BmrFI CCNGG 4 cut(s) 109, 800, 821, 1085
BmsI GCATC 3 cut(s) 364, 431, 1124
BpiI GAAGAC 1 cut(s) 411
BpmI CTGGAG 2 cut(s) 782, 1092
Bpu14I TTCGAA 1 cut(s) 1062
BpuMI CCSGG 1 cut(s) 109
BsaI GGTCTC 2 cut(s) 29, 653
BsaJI CCNNGG 2 cut(s) 108, 907
BsaXI ACNNNNNCTCC 2 cut(s) 1323, 1353
Bsc4I CCNNNNNNNGG 2 cut(s) 242, 1408
Bse118I RCCGGY 2 cut(s) 58, 1279
Bse1I ACTGG 2 cut(s) 15, 385
Bse3DI GCAATG 1 cut(s) 417
BseBI CCWGG 3 cut(s) 800, 821, 1085
BseDI CCNNGG 2 cut(s) 108, 907
BseGI GGATG 2 cut(s) 1201, 1252
BseLI CCNNNNNNNGG 2 cut(s) 242, 1408
BseMI GCAATG 1 cut(s) 417
BseNI ACTGG 2 cut(s) 15, 385
BseRI GAGGAG 1 cut(s) 1424
BseSI GKGCMC 2 cut(s) 450, 1378
BseXI GCAGC 2 cut(s) 190, 703
BseYI CCCAGC 1 cut(s) 885
BsgI GTGCAG 3 cut(s) 405, 702, 800
Bsh1236I CGCG 1 cut(s) 41
BshFI GGCC 4 cut(s) 113, 448, 912, 1088
BsiSI CCGG 4 cut(s) 59, 108, 114, 1280
BslFI GGGAC 4 cut(s) 689, 985, 1268, 1280
BslI CCNNNNNNNGG 2 cut(s) 242, 1408
BsmAI GTCTC 3 cut(s) 29, 653, 800
BsmFI GGGAC 4 cut(s) 689, 985, 1268, 1280
BsnI GGCC 4 cut(s) 113, 448, 912, 1088
Bso31I GGTCTC 2 cut(s) 29, 653
Bsp119I TTCGAA 1 cut(s) 1062
Bsp120I GGGCCC 1 cut(s) 446
Bsp1286I GDGCHC 2 cut(s) 450, 1378
Bsp1407I TGTACA 2 cut(s) 3, 1198
BspACI CCGC 7 cut(s) 9, 39, 82, 91, 94, 709, 1307
BspANI GGCC 4 cut(s) 113, 448, 912, 1088
BspFNI CGCG 1 cut(s) 41
BspHI TCATGA 2 cut(s) 483, 622
BspLI GGNNCC 8 cut(s) 13, 80, 106, 112, 124, 263, 448, 1416
BspMAI CTGCAG 1 cut(s) 688
BspPI GGATC 9 cut(s) 46, 99, 112, 117, 130, 253, 940, 1280, 1317
BspT104I TTCGAA 1 cut(s) 1062
BspTI CTTAAG 1 cut(s) 349
BspTNI GGTCTC 2 cut(s) 29, 653
BsrDI GCAATG 1 cut(s) 417
BsrFI RCCGGY 2 cut(s) 58, 1279
BsrGI TGTACA 2 cut(s) 3, 1198
BsrI ACTGG 2 cut(s) 15, 385
BssAI RCCGGY 2 cut(s) 58, 1279
BssECI CCNNGG 2 cut(s) 108, 907
BssT1I CCWWGG 1 cut(s) 907
Bst2UI CCWGG 3 cut(s) 800, 821, 1085
Bst4CI ACNGT 2 cut(s) 553, 1339
Bst6I CTCTTC 1 cut(s) 1401
BstAFI CTTAAG 1 cut(s) 349
BstAPI GCANNNNNTGC 1 cut(s) 383
BstAUI TGTACA 2 cut(s) 3, 1198
BstBI TTCGAA 1 cut(s) 1062
BstDEI CTNAG 2 cut(s) 1090, 1292
BstEII GGTNACC 1 cut(s) 1157
BstENI CCTNNNNNAGG 1 cut(s) 240
BstF5I GGATG 2 cut(s) 1201, 1252
BstFNI CGCG 1 cut(s) 41
BstHHI GCGC 2 cut(s) 43, 667
BstMAI GTCTC 3 cut(s) 29, 653, 800
BstMWI GCNNNNNNNGC 5 cut(s) 90, 203, 383, 445, 468
BstNI CCWGG 3 cut(s) 800, 821, 1085
BstNSI RCATGY 5 cut(s) 682, 703, 1016, 1323, 1351
BstPI GGTNACC 1 cut(s) 1157
BstSCI CCNGG 4 cut(s) 107, 798, 819, 1083
BstSFI CTRYAG 2 cut(s) 684, 1338
BstSLI GKGCMC 2 cut(s) 450, 1378
BstUI CGCG 1 cut(s) 41
BstV1I GCAGC 2 cut(s) 190, 703
BstV2I GAAGAC 1 cut(s) 411
BstX2I RGATCY 5 cut(s) 51, 104, 122, 245, 1309
BstYI RGATCY 5 cut(s) 51, 104, 122, 245, 1309
BsuRI GGCC 4 cut(s) 113, 448, 912, 1088
BtsCI GGATG 2 cut(s) 1201, 1252
BtsIMutI CAGTG 3 cut(s) 22, 557, 840
CciI TCATGA 2 cut(s) 483, 622
CfoI GCGC 2 cut(s) 43, 667
Cfr10I RCCGGY 2 cut(s) 58, 1279
Cfr13I GGNCC 6 cut(s) 12, 79, 111, 262, 446, 447
CseI GACGC 1 cut(s) 608
Csp6I GTAC 3 cut(s) 4, 1199, 1335
CviQI GTAC 3 cut(s) 4, 1199, 1335
DdeI CTNAG 2 cut(s) 1090, 1292
DraI TTTAAA 1 cut(s) 291
Eam1104I CTCTTC 1 cut(s) 1401
EarI CTCTTC 1 cut(s) 1401
EciI GGCGGA 2 cut(s) 80, 1322
Eco130I CCWWGG 1 cut(s) 907
Eco24I GRGCYC 1 cut(s) 450
Eco31I GGTCTC 2 cut(s) 29, 653
Eco47I GGWCC 3 cut(s) 12, 79, 262
Eco57I CTGAAG 3 cut(s) 219, 258, 599
Eco91I GGTNACC 1 cut(s) 1157
EcoNI CCTNNNNNAGG 1 cut(s) 240
EcoO109I RGGNCCY 1 cut(s) 446
EcoO65I GGTNACC 1 cut(s) 1157
EcoRII CCWGG 3 cut(s) 798, 819, 1083
EcoT14I CCWWGG 1 cut(s) 907
EcoT38I GRGCYC 1 cut(s) 450
ErhI CCWWGG 1 cut(s) 907
FalI AAGNNNNNCTT 4 cut(s) 143, 175, 716, 748
FaqI GGGAC 4 cut(s) 689, 985, 1268, 1280
FauI CCCGC 1 cut(s) 2
Fnu4HI GCNGC 4 cut(s) 94, 204, 709, 717
FokI GGATG 2 cut(s) 1208, 1259
FriOI GRGCYC 1 cut(s) 450
Fsp4HI GCNGC 4 cut(s) 94, 204, 709, 717
FspBI CTAG 3 cut(s) 329, 570, 1047
GlaI GCGC 2 cut(s) 42, 666
GluI GCNGC 4 cut(s) 94, 204, 709, 717
GsaI CCCAGC 1 cut(s) 889
GsuI CTGGAG 2 cut(s) 782, 1092
HaeIII GGCC 4 cut(s) 113, 448, 912, 1088
HapII CCGG 4 cut(s) 59, 108, 114, 1280
HgaI GACGC 1 cut(s) 608
HhaI GCGC 2 cut(s) 43, 667
Hin6I GCGC 2 cut(s) 41, 665
HinP1I GCGC 2 cut(s) 41, 665
HincII GTYRAC 2 cut(s) 978, 1119
HindII GTYRAC 2 cut(s) 978, 1119
HindIII AAGCTT 1 cut(s) 1428
HinfI GANTC 4 cut(s) 117, 156, 332, 599
HpaI GTTAAC 1 cut(s) 1119
HpaII CCGG 4 cut(s) 59, 108, 114, 1280
Hpy166II GTNNAC 3 cut(s) 978, 1119, 1201
Hpy188I TCNGA 5 cut(s) 104, 122, 127, 304, 604
Hpy188III TCNNGA 7 cut(s) 265, 329, 484, 623, 956, 1073, 1109
Hpy8I GTNNAC 3 cut(s) 978, 1119, 1201
Hpy99I CGWCG 2 cut(s) 462, 1023
HpyAV CCTTC 5 cut(s) 236, 483, 538, 1106, 1146
HpyCH4III ACNGT 2 cut(s) 553, 1339
HpyCH4IV ACGT 1 cut(s) 974
HpyF10VI GCNNNNNNNGC 5 cut(s) 90, 203, 383, 445, 468
HpyF3I CTNAG 2 cut(s) 1090, 1292
HpySE526I ACGT 1 cut(s) 974
HspAI GCGC 2 cut(s) 41, 665
KroI GCCGGC 1 cut(s) 1279
KroNI GCCGGC 1 cut(s) 1281
KspAI GTTAAC 1 cut(s) 1119
LmnI GCTCC 2 cut(s) 139, 1037
Lsp1109I GCAGC 2 cut(s) 190, 703
LweI GCATC 3 cut(s) 364, 431, 1124
MaeI CTAG 3 cut(s) 329, 570, 1047
MaeII ACGT 1 cut(s) 974
MaeIII GTNAC 4 cut(s) 17, 740, 838, 1157
MfeI CAATTG 1 cut(s) 790
MflI RGATCY 5 cut(s) 51, 104, 122, 245, 1309
MhlI GDGCHC 2 cut(s) 450, 1378
MlyI GAGTC 1 cut(s) 111
MroNI GCCGGC 1 cut(s) 1279
MroXI GAANNNNTTC 4 cut(s) 553, 728, 1068, 1395
MseI TTAA 8 cut(s) 290, 350, 696, 806, 938, 1118, 1275, 1432
MslI CAYNNNNRTG 2 cut(s) 427, 1358
MspA1I CMGCKG 2 cut(s) 9, 1172
MspCI CTTAAG 1 cut(s) 349
MspI CCGG 4 cut(s) 59, 108, 114, 1280
MspR9I CCNGG 4 cut(s) 109, 800, 821, 1085
MunI CAATTG 1 cut(s) 790
MvaI CCWGG 3 cut(s) 800, 821, 1085
MvnI CGCG 1 cut(s) 41
MwoI GCNNNNNNNGC 5 cut(s) 90, 203, 383, 445, 468
NaeI GCCGGC 1 cut(s) 1281
NciI CCSGG 1 cut(s) 109
NgoMIV GCCGGC 1 cut(s) 1279
NlaIV GGNNCC 8 cut(s) 13, 80, 106, 112, 124, 263, 448, 1416
NmuCI GTSAC 3 cut(s) 17, 740, 838
NspI RCATGY 5 cut(s) 682, 703, 1016, 1323, 1351
NspV TTCGAA 1 cut(s) 1062
PaeI GCATGC 3 cut(s) 1016, 1323, 1351
PagI TCATGA 2 cut(s) 483, 622
PciI ACATGT 1 cut(s) 699
PdiI GCCGGC 1 cut(s) 1281
PdmI GAANNNNTTC 4 cut(s) 553, 728, 1068, 1395
PfeI GAWTC 3 cut(s) 156, 332, 599
PflFI GACNNNGTC 1 cut(s) 1079
PfoI TCCNGGA 1 cut(s) 798
PkrI GCNGC 4 cut(s) 95, 205, 710, 718
PleI GAGTC 1 cut(s) 111
PpsI GAGTC 1 cut(s) 111
PscI ACATGT 1 cut(s) 699
PshBI ATTAAT 1 cut(s) 806
Psp6I CCWGG 3 cut(s) 798, 819, 1083
PspEI GGTNACC 1 cut(s) 1157
PspFI CCCAGC 1 cut(s) 885
PspGI CCWGG 3 cut(s) 798, 819, 1083
PspN4I GGNNCC 8 cut(s) 13, 80, 106, 112, 124, 263, 448, 1416
PspOMI GGGCCC 1 cut(s) 446
PspPI GGNCC 6 cut(s) 12, 79, 111, 262, 446, 447
PstI CTGCAG 1 cut(s) 688
PsuI RGATCY 5 cut(s) 51, 104, 122, 245, 1309
PsyI GACNNNGTC 1 cut(s) 1079
PvuII CAGCTG 1 cut(s) 1172
RsaI GTAC 3 cut(s) 5, 1200, 1336
RsaNI GTAC 3 cut(s) 4, 1199, 1335
RseI CAYNNNNRTG 2 cut(s) 427, 1358
SaqAI TTAA 8 cut(s) 290, 350, 696, 806, 938, 1118, 1275, 1432
SatI GCNGC 4 cut(s) 94, 204, 709, 717
Sau96I GGNCC 6 cut(s) 12, 79, 111, 262, 446, 447
SbfI CCTGCAGG 1 cut(s) 688
SchI GAGTC 1 cut(s) 111
ScrFI CCNGG 4 cut(s) 109, 800, 821, 1085
SdaI CCTGCAGG 1 cut(s) 688
SduI GDGCHC 2 cut(s) 450, 1378
SfaNI GCATC 3 cut(s) 364, 431, 1124
SfcI CTRYAG 2 cut(s) 684, 1338
SfuI TTCGAA 1 cut(s) 1062
SinI GGWCC 3 cut(s) 12, 79, 262
SmiMI CAYNNNNRTG 2 cut(s) 427, 1358
SmlI CTYRAG 1 cut(s) 349
SmoI CTYRAG 1 cut(s) 349
SphI GCATGC 3 cut(s) 1016, 1323, 1351
Sse8387I CCTGCAGG 1 cut(s) 688
SsiI CCGC 7 cut(s) 9, 39, 82, 91, 94, 709, 1307
SspMI CTAG 3 cut(s) 329, 570, 1047
StyD4I CCNGG 4 cut(s) 107, 798, 819, 1083
StyI CCWWGG 1 cut(s) 907
TaaI ACNGT 2 cut(s) 553, 1339
TaiI ACGT 1 cut(s) 977
TaqI TCGA 4 cut(s) 165, 955, 1062, 1132
TatI WGTACW 2 cut(s) 3, 1198
TauI GCSGC 2 cut(s) 96, 711
TfiI GAWTC 3 cut(s) 156, 332, 599
Tru1I TTAA 8 cut(s) 290, 350, 696, 806, 938, 1118, 1275, 1432
Tru9I TTAA 8 cut(s) 290, 350, 696, 806, 938, 1118, 1275, 1432
TscAI CASTG 3 cut(s) 22, 564, 847
TseFI GTSAC 3 cut(s) 17, 740, 838
TseI GCWGC 2 cut(s) 203, 716
Tsp45I GTSAC 3 cut(s) 17, 740, 838
TspDTI ATGAA 7 cut(s) 410, 417, 472, 500, 516, 639, 1136
TspRI CASTG 3 cut(s) 22, 564, 847
Tth111I GACNNNGTC 1 cut(s) 1079
Vha464I CTTAAG 1 cut(s) 349
VpaK11BI GGWCC 3 cut(s) 12, 79, 262
VspI ATTAAT 1 cut(s) 806
XagI CCTNNNNNAGG 1 cut(s) 240
XapI RAATTY 2 cut(s) 478, 1042
XbaI TCTAGA 1 cut(s) 328
XceI RCATGY 5 cut(s) 682, 703, 1016, 1323, 1351
XmnI GAANNNNTTC 4 cut(s) 553, 728, 1068, 1395
XspI CTAG 3 cut(s) 329, 570, 1047
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.