AT5G19400

Telomerase activating protein Est1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0008095
Physical Location & Seq
Forward (+)
6539926 .. 6545081
5156 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G19400.1

Sequence Viewer

Length: 3180 bp
ATGATGACTTTACAGATGGATAAAACTACTGCTTCCTCTTCATGGGAGCGAGCCAAGTCCATATATGATGAGATTGCTGAGTTAGCAAACAAGCGTCAGAAGGCTGGAAATCCACCTGACCCAAATTTGTTGCAGCTCTTACGTGAGAAGTATGAAGCAATAATTCTTGAAAGTCATACCTTTTCTGAGCAGCACAACATTGAAATTCCTCTGTGGCAGTTGCATTACAAACGGATTGAATATTTTAGATTACACATCAATCGTGTATTGGCTTCTAGTACCTCGACAGCAGCGCAAAATGTCAAGGGTCCTTCTAAAGCAGAACAAATTGCACAACTCAAGCTGCAGTTCAGAACATTCCTTTCAGAAGCAACTGGGTTTTACCATGACATGATCTTAAAAATTAGATCAAAGTATGGCCTTCCCCTGGGTTCTTTTTCTGAGGATCAACAGAGTCAAAATTTGTCTGATAAAGATGGAAAAGAGTTAGCAGAAGTTCAAAAAGCCTTGAAATCTTGTCATCGTTGCTTAATATACCTTGGTGATCTGGCTCGGTATAAAGGAATGTATGCAGAGGGGGATTCCAGGAGCAGACAGTATGCTTCTGCTTCAAGTTACTATTTGCAAGCAGCTTCTCTATGGCCAGCCAGTGGAAACCCACATCATCAGCTTGCAATAGTTGCTTCTTATTCGAGGGATGAGTTTGTAACAACATATCGTTATTTCCGAAGTTTGGCTGTGGAGTATCCTTTCCCAACTGCCCGTGACAACTTGATTGTTGCTTTTGATAAGAATCGTCAGAGTTATGAAAAATTGTTTGTGCCCTCCAAAGACTCATCCAAGAGGCTGACTGGTAAAGGAAGAGGGAAAGGTGCAGATATTTCATTGAAAGATGCGACCTTGGTAGCTGGTCCTGAGAAGGATAAAGTAACTATTGCAAATGAGATGCTCAAAGCATTCAGCATTAGATTTGTTCATCTCAATGGGATTCTTTTTACCCGAACAAGCCTGGAGACATTCTTTGATGTTCTTGCCTCCACTAGCAGCAGTTTACGAGAGGTGATTTCTTTGGGCTCAGCTAAAGAGCTGACTTTGGGCATAGACACCAGTGACAGCGCACTTTTCATTGTTAGAGTCGTGACAATGCTTATATTTAGTGTTCATAACTCAAAGAAAGAGACAGAAGGTCAGTCATATGCAGAGATTGTACAGCGTGTTGAGCCTGCCAGAAACTCCTTAACAGCTAGTTTCGAGTTACTTGGACTCGTAATAGAGAAGTGTGTGCAACTGGGAGATCCTTCGTCGAGTTACTTTTTGCCTGGTGTCTTAGTTTTTGTTGAATGGTTGGCCTGTTGTCCTGACATTGCACTGGGAAGTGATCCCGATGATAGACAGACTGCTGTAAGAAATAGCTTTTGGAACCAGTTTGTTGTCTTCTTCAATCAAGTCTTATCGCTTGGACCTACGTTTATTGATGATGTCGAAGACGAGACTTGCTTCTCAAACATGAGCTTGTATGATGAAAGAGAAACTGAAAACCGGCTTGCACTATGGGAGGACTATGAACTAAGAGGATTCTTGCCACTGCTTCCAGCTCAGACGATTCTCAACTTCTCAAGGAAACATTCGTTTGGAACTGAAGGTCCCAAGGAAAAGAAAGCTCGTATAAAGAGGATCTTTGCAGCAGGGAAAGCTTTGACCAGTGTGATCAAAGTTGATCAGAATCATGTATATTTTGATTCAAAGAAGAAGAAGTTTCTTGTTGGTGTAAAACCGGCAGATGACTTTCTGGATTCTCATTCAAGCCCACCTAAAGCTTGTAATGCTTTGCAAGATAACCAGGTAATGATAGATCATAACTCGCCAATAATGCAGCTTGATCAACAGATTTATATGGGTGAGGAAGATGATGATGATGAAGTAATTGTTTTCAAGCCGCTTGTTACTGAAAAGAGGAAAGAGGCTTCTGACCAAATATATGTTCCTAGTGGAGGCTTCAGGAAATCTGATCAAGTTACTACTATGGGGGACTTTAAAGCTTTAAGTGGATCTGATGTAGCTTTTCATGAAAATCAAATTCTGCAAGCTAGAGGCAATGCGAGTATTCAAGTGCCTGCATCTGTTGGTGCTAACCTTCTGGGACCTCTACAGCCATCAACCCAGTCTCAAGCTATGCATATGCAACAAGTTCAGACGCAGGTTCAAGTACCTGCATCTGTTGGTGCTAACCTTCTGGGACTTCTTCTGACATCAACCCAGTCTCAAGCTATGCATATGCAACAAGTTCAGACGCAGGCAGTGAATCCTCAGCCAGCCCAATCACTAGCTGCTTCTCGACTTCAGCCAATACAATCACAGGTCGCACAACCACTGCCATCACGGGTTGTGCACTTTCAACAAACTCAAGCTCAGGTTTCACATGTTTCACCGGCCCACTCGCAATCTACTTCCTTTGGTGGTGGTAGCAAGTGGTCACCCGAAGAAGCTGCTTCTCTTGCTAGTAGCCTATCTGGGTTTGCTCAGCTGGGTAATGGTCATGTAATGAGGAATGAGATGCAAGGAAATCATGGAGTTTCCTATTACCCTGCACACTCATTACCCGTCCACCAGTCTTACAATGGCAATGGTATGGGTGGTATGCCATATTCTCAGTCAAGAACACCTGAAGCTGTATTCCCACCCAAAATTGATCCTGTTTTATCATCCGGAGTTGTTGCTGATGGCCTGGGCGTCCAATCTTCATTAGCAAAGAAAAATCCAATCAGTAGAGCCTTCAGGCATCTTGGCCCTCCGCCTGGGTTTAACTCTGTCCCAGCTAAGCTGCAAAAGGAGCCAGCACCTGGTTCGGAATTGTCTGGCAACAACCACCTACCGGTTGATGATTACAGCTGGTTGGATGGATACCAAGCTCAATCTTCTCGAGGCGTTGGGCTGAACAGTTCTTTGAATTACGCCACCTCTGGGAAACCAGAACACTTGGGTAGTACTGGCAATGGACTGAACGGGCCTGCCAACTTTCCGTTTCCTGGAAAACAAGTTCCAACTTCACAGGTCCAAGCAGATTTTCCTTATTTCCAGAACCCTCAGAAAGATAACTTTGTGGACAAAAACCATCAGTCAACTCAACTCCCCGAGCAATATCAAGGACAGTCGACTTGGTCGAGTCGTCACTTTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000184 GO:0000212 GO:0000226 GO:0000280 GO:0000723 GO:0000932 GO:0000956 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003824 GO:0004518 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005697 GO:0005737 GO:0006139 GO:0006259 GO:0006278 GO:0006401 GO:0006402 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0007004 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009892 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0010833 GO:0015031 GO:0015833 GO:0015931 GO:0016043 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019439 GO:0022402 GO:0022414 GO:0022607 GO:0031323 GO:0031329 GO:0031503 GO:0032200 GO:0032991 GO:0033036 GO:0034613 GO:0034641 GO:0034645 GO:0034654 GO:0034655 GO:0035770 GO:0036464 GO:0042162 GO:0042592 GO:0042886 GO:0043021 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043487 GO:0043565 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044270 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045184 GO:0046483 GO:0046700 GO:0046907 GO:0048285 GO:0048519 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051171 GO:0051179 GO:0051225 GO:0051234 GO:0051236 GO:0051252 GO:0051276 GO:0051321 GO:0051641 GO:0051649 GO:0060249 GO:0060255 GO:0065007 GO:0065008 GO:0070034 GO:0070727 GO:0070925 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0071897 GO:0080090 GO:0090304 GO:0090305 GO:0090306 GO:0090501 GO:0097159 GO:0140013 GO:0140098 GO:1901360 GO:1901361 GO:1901362 GO:1901363 GO:1901575 GO:1901576 GO:1903046 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
EST1 EST1_DNA_bind

Protein Analysis

1059

Amino Acids

117.0

Weight (kDa)

6.76

Isoelectric Point (pI)

48.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EST1 PF10374 68 - 190 8.5e-21 Telomerase activating protein Est1
EST1_DNA_bind PF10373 203 - 531 4.5e-64 Est1 DNA/RNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 2188, 2218
AccB7I CCANNNNNTGG 2 cut(s) 650, 2840
AccI GTMKAC 1 cut(s) 3152
AccIII TCCGGA 1 cut(s) 2705
AciI CCGC 2 cut(s) 1937, 2792
AclWI GGATC 6 cut(s) 453, 1289, 1373, 1682, 2056, 2684
AcoI YGGCCR 1 cut(s) 641
AcsI RAATTY 4 cut(s) 124, 204, 460, 2076
AcuI CTGAAG 5 cut(s) 1659, 1981, 2324, 2685, 2758
AcyI GRCGYC 1 cut(s) 2730
AdeI CACNNNGTG 1 cut(s) 3175
AfaI GTAC 4 cut(s) 280, 1209, 2208, 2986
AflIII ACRYGT 1 cut(s) 2419
AgeI ACCGGT 1 cut(s) 2872
AhdI GACNNNNNGTC 1 cut(s) 1185
AjnI CCWGG 9 cut(s) 426, 584, 1008, 1318, 1839, 2724, 2794, 2839, 3025
AjuI GAANNNNNNNTTGG 6 cut(s) 1399, 1431, 1965, 1997, 3048, 3080
AloI GAACNNNNNNTCC 4 cut(s) 1627, 1659, 3021, 3053
Alw21I GWGCWC 1 cut(s) 2391
Alw26I GTCTC 5 cut(s) 1007, 1172, 1484, 2169, 2265
Alw44I GTGCAC 1 cut(s) 2387
AlwI GGATC 6 cut(s) 453, 1289, 1373, 1682, 2056, 2684
AlwNI CAGNNNCTG 1 cut(s) 2840
Ama87I CYCGRG 2 cut(s) 2919, 3131
Aor13HI TCCGGA 1 cut(s) 2705
AoxI GGCC 7 cut(s) 418, 641, 1347, 2430, 2722, 2785, 3005
ApaLI GTGCAC 1 cut(s) 2387
ApoI RAATTY 4 cut(s) 124, 204, 460, 2076
AsiGI ACCGGT 1 cut(s) 2872
AspLEI GCGC 2 cut(s) 295, 1118
AspS9I GGNCC 9 cut(s) 308, 911, 1460, 1643, 2141, 2431, 2786, 3005, 3052
AsuHPI GGTGA 5 cut(s) 554, 1072, 1910, 2418, 2466
AvaI CYCGRG 2 cut(s) 2919, 3131
AvaII GGWCC 6 cut(s) 308, 911, 1460, 1643, 2141, 3052
BaeGI GKGCMC 2 cut(s) 825, 2391
BalI TGGCCA 1 cut(s) 643
BanII GRGCYC 1 cut(s) 1076
BbsI GAAGAC 2 cut(s) 1426, 1491
Bbv12I GWGCWC 1 cut(s) 2391
BbvCI CCTCAGC 1 cut(s) 2307
BccI CCATC 7 cut(s) 10, 470, 2161, 2383, 2714, 2891, 3120
BcgI CGANNNNNNTGC 4 cut(s) 2468, 2502, 2826, 2860
BciT130I CCWGG 9 cut(s) 428, 586, 1010, 1320, 1841, 2726, 2796, 2841, 3027
BciVI GTATCC 2 cut(s) 756, 2894
BclI TGATCA 4 cut(s) 1707, 1717, 1879, 2008
BcoDI GTCTC 5 cut(s) 1007, 1172, 1484, 2169, 2265
BfaI CTAG 7 cut(s) 276, 1041, 1245, 1986, 2088, 2324, 2499
BfmI CTRYAG 2 cut(s) 344, 2147
BfuAI ACCTGC 2 cut(s) 2188, 2218
BfuI GTATCC 2 cut(s) 756, 2894
BlpI GCTNAGC 3 cut(s) 1075, 2520, 2817
BmcAI AGTACT 1 cut(s) 2986
Bme1390I CCNGG 9 cut(s) 428, 586, 1010, 1320, 1841, 2726, 2796, 2841, 3027
Bme18I GGWCC 6 cut(s) 308, 911, 1460, 1643, 2141, 3052
BmeRI GACNNNNNGTC 1 cut(s) 1185
BmeT110I CYCGRG 2 cut(s) 2919, 3131
BmgT120I GGNCC 9 cut(s) 308, 911, 1460, 1643, 2141, 2431, 2786, 3005, 3052
BmiI GGNNCC 5 cut(s) 309, 1421, 1645, 2142, 2832
BmrFI CCNGG 9 cut(s) 428, 586, 1010, 1320, 1841, 2726, 2796, 2841, 3027
BmrI ACTGGG 5 cut(s) 384, 1298, 1379, 2155, 2251
BmsI GCATC 6 cut(s) 883, 936, 2126, 2222, 2544, 2788
BmuI ACTGGG 5 cut(s) 384, 1298, 1379, 2155, 2251
BpiI GAAGAC 2 cut(s) 1426, 1491
BpmI CTGGAG 1 cut(s) 1031
Bpu10I CCTNAGC 2 cut(s) 2307, 2409
Bpu1102I GCTNAGC 3 cut(s) 1075, 2520, 2817
BpuEI CTTGAG 5 cut(s) 323, 1600, 2151, 2247, 2388
BsaAI YACGTR 1 cut(s) 143
BsaBI GATNNNNATC 2 cut(s) 792, 1722
BsaHI GRCGYC 1 cut(s) 2730
BsaJI CCNNGG 7 cut(s) 426, 427, 538, 900, 1647, 2725, 2795
BsaWI WCCGGW 2 cut(s) 2705, 2872
Bse118I RCCGGY 4 cut(s) 1539, 1774, 2428, 2872
Bse3DI GCAATG 4 cut(s) 1362, 2101, 2629, 2998
Bse8I GATNNNNATC 2 cut(s) 792, 1722
BseAI TCCGGA 1 cut(s) 2705
BseBI CCWGG 9 cut(s) 428, 586, 1010, 1320, 1841, 2726, 2796, 2841, 3027
BseDI CCNNGG 7 cut(s) 426, 427, 538, 900, 1647, 2725, 2795
BseGI GGATG 4 cut(s) 703, 836, 2702, 2902
BseJI GATNNNNATC 2 cut(s) 792, 1722
BseMI GCAATG 4 cut(s) 1362, 2101, 2629, 2998
BseSI GKGCMC 2 cut(s) 825, 2391
BseYI CCCAGC 2 cut(s) 2524, 2812
BsgI GTGCAG 2 cut(s) 894, 2571
BshFI GGCC 7 cut(s) 420, 643, 1349, 2432, 2724, 2787, 3007
BshTI ACCGGT 1 cut(s) 2872
BsiHKAI GWGCWC 1 cut(s) 2391
BsiHKCI CYCGRG 2 cut(s) 2919, 3131
BsiSI CCGG 5 cut(s) 1540, 1775, 2429, 2706, 2873
BslFI GGGAC 5 cut(s) 1629, 2042, 2154, 2250, 2795
BsmAI GTCTC 5 cut(s) 1007, 1172, 1484, 2169, 2265
BsmFI GGGAC 5 cut(s) 1629, 2042, 2154, 2250, 2795
BsmI GAATGC 1 cut(s) 956
BsnI GGCC 7 cut(s) 420, 643, 1349, 2432, 2724, 2787, 3007
BsoBI CYCGRG 2 cut(s) 2919, 3131
Bsp1286I GDGCHC 3 cut(s) 825, 1076, 2391
Bsp13I TCCGGA 1 cut(s) 2705
Bsp1407I TGTACA 1 cut(s) 1207
Bsp1720I GCTNAGC 3 cut(s) 1075, 2520, 2817
BspACI CCGC 2 cut(s) 1937, 2792
BspANI GGCC 7 cut(s) 420, 643, 1349, 2432, 2724, 2787, 3007
BspEI TCCGGA 1 cut(s) 2705
BspHI TCATGA 1 cut(s) 2065
BspLI GGNNCC 5 cut(s) 309, 1421, 1645, 2142, 2832
BspMAI CTGCAG 1 cut(s) 348
BspMI ACCTGC 2 cut(s) 2188, 2218
BspPI GGATC 6 cut(s) 453, 1289, 1373, 1682, 2056, 2684
BsrDI GCAATG 4 cut(s) 1362, 2101, 2629, 2998
BsrFI RCCGGY 4 cut(s) 1539, 1774, 2428, 2872
BsrGI TGTACA 1 cut(s) 1207
BssAI RCCGGY 4 cut(s) 1539, 1774, 2428, 2872
BssECI CCNNGG 7 cut(s) 426, 427, 538, 900, 1647, 2725, 2795
BssNI GRCGYC 1 cut(s) 2730
BssT1I CCWWGG 3 cut(s) 538, 900, 1647
Bst2UI CCWGG 9 cut(s) 428, 586, 1010, 1320, 1841, 2726, 2796, 2841, 3027
Bst4CI ACNGT 3 cut(s) 597, 2939, 3150
Bst6I CTCTTC 2 cut(s) 43, 856
BstACI GRCGYC 1 cut(s) 2730
BstAPI GCANNNNNTGC 1 cut(s) 680
BstAUI TGTACA 1 cut(s) 1207
BstBAI YACGTR 1 cut(s) 143
BstEII GGTNACC 1 cut(s) 2472
BstENI CCTNNNNNAGG 1 cut(s) 1989
BstF5I GGATG 4 cut(s) 703, 836, 2702, 2902
BstHHI GCGC 2 cut(s) 295, 1118
BstMAI GTCTC 5 cut(s) 1007, 1172, 1484, 2169, 2265
BstMWI GCNNNNNNNGC 8 cut(s) 83, 680, 1219, 1691, 1823, 1870, 2495, 2830
BstNI CCWGG 9 cut(s) 428, 586, 1010, 1320, 1841, 2726, 2796, 2841, 3027
BstNSI RCATGY 1 cut(s) 2423
BstPI GGTNACC 1 cut(s) 2472
BstSCI CCNGG 9 cut(s) 426, 584, 1008, 1318, 1839, 2724, 2794, 2839, 3025
BstSFI CTRYAG 2 cut(s) 344, 2147
BstSLI GKGCMC 2 cut(s) 825, 2391
BstV2I GAAGAC 2 cut(s) 1426, 1491
BstX2I RGATCY 3 cut(s) 1294, 1674, 2048
BstYI RGATCY 3 cut(s) 1294, 1674, 2048
BsuI GTATCC 2 cut(s) 756, 2894
BsuRI GGCC 7 cut(s) 420, 643, 1349, 2432, 2724, 2787, 3007
BtsCI GGATG 4 cut(s) 703, 836, 2702, 2902
BtsI GCAGTG 3 cut(s) 1583, 2304, 2369
BtsIMutI CAGTG 7 cut(s) 655, 1114, 1367, 1583, 1708, 2304, 2369
BveI ACCTGC 2 cut(s) 2188, 2218
CaiI CAGNNNCTG 1 cut(s) 2840
CciI TCATGA 1 cut(s) 2065
CfoI GCGC 2 cut(s) 295, 1118
Cfr10I RCCGGY 4 cut(s) 1539, 1774, 2428, 2872
Cfr13I GGNCC 9 cut(s) 308, 911, 1460, 1643, 2141, 2431, 2786, 3005, 3052
CseI GACGC 4 cut(s) 83, 2203, 2299, 2719
CsiI ACCWGGT 2 cut(s) 1839, 2839
Csp6I GTAC 4 cut(s) 279, 1208, 2207, 2985
CspAI ACCGGT 1 cut(s) 2872
CviAII CATG 9 cut(s) 42, 386, 391, 1507, 1727, 2066, 2420, 2537, 2567
CviQI GTAC 4 cut(s) 279, 1208, 2207, 2985
DraI TTTAAA 1 cut(s) 2035
DraIII CACNNNGTG 1 cut(s) 3175
DriI GACNNNNNGTC 1 cut(s) 1185
EaeI YGGCCR 1 cut(s) 641
Eam1104I CTCTTC 2 cut(s) 43, 856
Eam1105I GACNNNNNGTC 1 cut(s) 1185
EarI CTCTTC 2 cut(s) 43, 856
EciI GGCGGA 1 cut(s) 2781
Eco130I CCWWGG 3 cut(s) 538, 900, 1647
Eco24I GRGCYC 1 cut(s) 1076
Eco47I GGWCC 6 cut(s) 308, 911, 1460, 1643, 2141, 3052
Eco57I CTGAAG 5 cut(s) 1659, 1981, 2324, 2685, 2758
Eco88I CYCGRG 2 cut(s) 2919, 3131
Eco91I GGTNACC 1 cut(s) 2472
EcoNI CCTNNNNNAGG 1 cut(s) 1989
EcoO109I RGGNCCY 3 cut(s) 308, 1643, 2141
EcoO65I GGTNACC 1 cut(s) 2472
EcoRII CCWGG 9 cut(s) 426, 584, 1008, 1318, 1839, 2724, 2794, 2839, 3025
EcoT14I CCWWGG 3 cut(s) 538, 900, 1647
EcoT22I ATGCAT 2 cut(s) 2178, 2274
EcoT38I GRGCYC 1 cut(s) 1076
ErhI CCWWGG 3 cut(s) 538, 900, 1647
FaeI CATG 9 cut(s) 45, 389, 394, 1510, 1730, 2069, 2423, 2540, 2570
FalI AAGNNNNNCTT 2 cut(s) 1661, 1693
FaqI GGGAC 5 cut(s) 1629, 2042, 2154, 2250, 2795
FatI CATG 9 cut(s) 41, 385, 390, 1506, 1726, 2065, 2419, 2536, 2566
FauNDI CATATG 3 cut(s) 1195, 2178, 2274
FbaI TGATCA 4 cut(s) 1707, 1717, 1879, 2008
FblI GTMKAC 1 cut(s) 3152
FokI GGATG 4 cut(s) 710, 823, 2689, 2909
FriOI GRGCYC 1 cut(s) 1076
FspBI CTAG 7 cut(s) 276, 1041, 1245, 1986, 2088, 2324, 2499
GlaI GCGC 2 cut(s) 294, 1117
GsaI CCCAGC 2 cut(s) 2528, 2816
GsuI CTGGAG 1 cut(s) 1031
HaeIII GGCC 7 cut(s) 420, 643, 1349, 2432, 2724, 2787, 3007
HapII CCGG 5 cut(s) 1540, 1775, 2429, 2706, 2873
HgaI GACGC 4 cut(s) 83, 2203, 2299, 2719
HhaI GCGC 2 cut(s) 295, 1118
Hin1I GRCGYC 1 cut(s) 2730
Hin1II CATG 9 cut(s) 45, 389, 394, 1510, 1730, 2069, 2423, 2540, 2570
Hin6I GCGC 2 cut(s) 293, 1116
HinP1I GCGC 2 cut(s) 293, 1116
HincII GTYRAC 2 cut(s) 3120, 3153
HindII GTYRAC 2 cut(s) 3120, 3153
HindIII AAGCTT 3 cut(s) 1692, 1815, 2037
HpaII CCGG 5 cut(s) 1540, 1775, 2429, 2706, 2873
HphI GGTGA 5 cut(s) 554, 1072, 1910, 2418, 2466
Hpy166II GTNNAC 6 cut(s) 1052, 2389, 2605, 3103, 3120, 3153
Hpy8I GTNNAC 6 cut(s) 1052, 2389, 2605, 3103, 3120, 3153
Hpy99I CGWCG 1 cut(s) 1306
HpyCH4III ACNGT 3 cut(s) 597, 2939, 3150
HpyCH4IV ACGT 2 cut(s) 142, 1466
HpyF10VI GCNNNNNNNGC 8 cut(s) 83, 680, 1219, 1691, 1823, 1870, 2495, 2830
HpySE526I ACGT 2 cut(s) 142, 1466
Hsp92I GRCGYC 1 cut(s) 2730
Hsp92II CATG 9 cut(s) 45, 389, 394, 1510, 1730, 2069, 2423, 2540, 2570
HspAI GCGC 2 cut(s) 293, 1116
Kpn2I TCCGGA 1 cut(s) 2705
Ksp22I TGATCA 4 cut(s) 1707, 1717, 1879, 2008
LmnI GCTCC 3 cut(s) 46, 588, 2830
LweI GCATC 6 cut(s) 883, 936, 2126, 2222, 2544, 2788
MabI ACCWGGT 2 cut(s) 1839, 2839
MaeI CTAG 7 cut(s) 276, 1041, 1245, 1986, 2088, 2324, 2499
MaeII ACGT 2 cut(s) 142, 1466
MflI RGATCY 3 cut(s) 1294, 1674, 2048
MhlI GDGCHC 3 cut(s) 825, 1076, 2391
MlsI TGGCCA 1 cut(s) 643
MluNI TGGCCA 1 cut(s) 643
MlyI GAGTC 5 cut(s) 463, 827, 1143, 1257, 3172
MmeI TCCRAC 2 cut(s) 2874, 3065
Mox20I TGGCCA 1 cut(s) 643
Mph1103I ATGCAT 2 cut(s) 2178, 2274
MroI TCCGGA 1 cut(s) 2705
MscI TGGCCA 1 cut(s) 643
MseI TTAA 6 cut(s) 398, 530, 1238, 2034, 2042, 2802
MslI CAYNNNNRTG 1 cut(s) 981
Msp20I TGGCCA 1 cut(s) 643
MspA1I CMGCKG 2 cut(s) 2524, 2889
MspI CCGG 5 cut(s) 1540, 1775, 2429, 2706, 2873
MspR9I CCNGG 9 cut(s) 428, 586, 1010, 1320, 1841, 2726, 2796, 2841, 3027
Mva1269I GAATGC 1 cut(s) 956
MvaI CCWGG 9 cut(s) 428, 586, 1010, 1320, 1841, 2726, 2796, 2841, 3027
MwoI GCNNNNNNNGC 8 cut(s) 83, 680, 1219, 1691, 1823, 1870, 2495, 2830
NdeI CATATG 3 cut(s) 1195, 2178, 2274
NlaIII CATG 9 cut(s) 45, 389, 394, 1510, 1730, 2069, 2423, 2540, 2570
NlaIV GGNNCC 5 cut(s) 309, 1421, 1645, 2142, 2832
NmuCI GTSAC 5 cut(s) 764, 1109, 1138, 2472, 3167
NsiI ATGCAT 2 cut(s) 2178, 2274
NspI RCATGY 1 cut(s) 2423
PaeR7I CTCGAG 1 cut(s) 2919
PagI TCATGA 1 cut(s) 2065
PasI CCCWGGG 1 cut(s) 427
PciI ACATGT 1 cut(s) 2419
PcsI WCGNNNNNNNCGW 2 cut(s) 724, 3158
PctI GAATGC 1 cut(s) 956
PfeI GAWTC 9 cut(s) 581, 793, 988, 1575, 1603, 1723, 1739, 1793, 2302
PflFI GACNNNGTC 1 cut(s) 3157
PflMI CCANNNNNTGG 2 cut(s) 650, 2840
PfoI TCCNGGA 2 cut(s) 584, 3025
PinAI ACCGGT 1 cut(s) 2872
PleI GAGTC 5 cut(s) 462, 827, 1142, 1257, 3171
PpsI GAGTC 5 cut(s) 462, 827, 1142, 1257, 3171
Ppu21I YACGTR 1 cut(s) 143
PpuMI RGGWCCY 3 cut(s) 308, 1643, 2141
PscI ACATGT 1 cut(s) 2419
Psp5II RGGWCCY 3 cut(s) 308, 1643, 2141
Psp6I CCWGG 9 cut(s) 426, 584, 1008, 1318, 1839, 2724, 2794, 2839, 3025
PspEI GGTNACC 1 cut(s) 2472
PspFI CCCAGC 2 cut(s) 2524, 2812
PspGI CCWGG 9 cut(s) 426, 584, 1008, 1318, 1839, 2724, 2794, 2839, 3025
PspN4I GGNNCC 5 cut(s) 309, 1421, 1645, 2142, 2832
PspPI GGNCC 9 cut(s) 308, 911, 1460, 1643, 2141, 2431, 2786, 3005, 3052
PspPPI RGGWCCY 3 cut(s) 308, 1643, 2141
PstI CTGCAG 1 cut(s) 348
PstNI CAGNNNCTG 1 cut(s) 2840
PsuI RGATCY 3 cut(s) 1294, 1674, 2048
PsyI GACNNNGTC 1 cut(s) 3157
PvuII CAGCTG 2 cut(s) 2524, 2889
RsaI GTAC 4 cut(s) 280, 1209, 2208, 2986
RsaNI GTAC 4 cut(s) 279, 1208, 2207, 2985
RseI CAYNNNNRTG 1 cut(s) 981
SalI GTCGAC 1 cut(s) 3151
SaqAI TTAA 6 cut(s) 398, 530, 1238, 2034, 2042, 2802
Sau96I GGNCC 9 cut(s) 308, 911, 1460, 1643, 2141, 2431, 2786, 3005, 3052
ScaI AGTACT 1 cut(s) 2986
SchI GAGTC 5 cut(s) 463, 827, 1143, 1257, 3172
ScrFI CCNGG 9 cut(s) 428, 586, 1010, 1320, 1841, 2726, 2796, 2841, 3027
SduI GDGCHC 3 cut(s) 825, 1076, 2391
SexAI ACCWGGT 2 cut(s) 1839, 2839
SfaNI GCATC 6 cut(s) 883, 936, 2126, 2222, 2544, 2788
SfcI CTRYAG 2 cut(s) 344, 2147
Sfr274I CTCGAG 1 cut(s) 2919
SinI GGWCC 6 cut(s) 308, 911, 1460, 1643, 2141, 3052
SlaI CTCGAG 1 cut(s) 2919
SmiMI CAYNNNNRTG 1 cut(s) 981
SmlI CTYRAG 6 cut(s) 338, 1615, 2166, 2262, 2403, 2919
SmoI CTYRAG 6 cut(s) 338, 1615, 2166, 2262, 2403, 2919
SsiI CCGC 2 cut(s) 1937, 2792
SspI AATATT 1 cut(s) 242
SspMI CTAG 7 cut(s) 276, 1041, 1245, 1986, 2088, 2324, 2499
StyD4I CCNGG 9 cut(s) 426, 584, 1008, 1318, 1839, 2724, 2794, 2839, 3025
StyI CCWWGG 3 cut(s) 538, 900, 1647
TaaI ACNGT 3 cut(s) 597, 2939, 3150
TaiI ACGT 2 cut(s) 145, 1469
TaqI TCGA 9 cut(s) 284, 692, 1251, 1304, 1482, 2335, 2920, 3152, 3161
TatI WGTACW 2 cut(s) 1207, 2984
TauI GCSGC 1 cut(s) 1939
TfiI GAWTC 9 cut(s) 581, 793, 988, 1575, 1603, 1723, 1739, 1793, 2302
Tru1I TTAA 6 cut(s) 398, 530, 1238, 2034, 2042, 2802
Tru9I TTAA 6 cut(s) 398, 530, 1238, 2034, 2042, 2802
TscAI CASTG 7 cut(s) 655, 1114, 1374, 1590, 1708, 2304, 2376
TseFI GTSAC 5 cut(s) 764, 1109, 1138, 2472, 3167
Tsp45I GTSAC 5 cut(s) 764, 1109, 1138, 2472, 3167
TspGWI ACGGA 2 cut(s) 247, 3009
TspRI CASTG 7 cut(s) 655, 1114, 1374, 1590, 1708, 2304, 2376
Tth111I GACNNNGTC 1 cut(s) 3157
Van91I CCANNNNNTGG 2 cut(s) 650, 2840
VneI GTGCAC 1 cut(s) 2387
VpaK11BI GGWCC 6 cut(s) 308, 911, 1460, 1643, 2141, 3052
XagI CCTNNNNNAGG 1 cut(s) 1989
XapI RAATTY 4 cut(s) 124, 204, 460, 2076
XceI RCATGY 1 cut(s) 2423
XcmI CCANNNNNNNNNTGG 1 cut(s) 2615
XhoI CTCGAG 1 cut(s) 2919
XmiI GTMKAC 1 cut(s) 3152
XspI CTAG 7 cut(s) 276, 1041, 1245, 1986, 2088, 2324, 2499
ZrmI AGTACT 1 cut(s) 2986
Zsp2I ATGCAT 2 cut(s) 2178, 2274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.