AT5G19485

MobA-like NTP transferase domain

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
6573592 .. 6576534
2943 bp
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UTR
Exon/CDS
Intron
AT5G19485.1

Sequence Viewer

Length: 1371 bp
ATGGATTTCCAGGTCGTGATTCTAGCCGGCGGATTCTCTAGTTATCTTGTTCCCTTAGTCGCCAAGGAAGTTCCTAAGGCGTTGCTTCCCGTAGCGAATCGTCCGGTGTTGTCTTACGTTCTGGATCTTCTCGAGAGTAGTAATCTCAAGGATCTGATCGTCGTTGTTGAAGGGGAAGATGCTGCTTTGAAAGTTGGTGGATGGATTTCTTCTGCTTGTGTTGATCGTTTACATGTTGAGGTTGCTGCTGTTGCTGAGAATGTTGGAACTGCTGGGGCACTCAGGGCAATTGCACACCACTTAACTGCCAAAGACATTTTGATCGTAAGTGGAGACATTGTTTCTGATATTCCTCCTGGTGCTGTTGCCGCCACTCATAGAAGGCATGATGCAGCAGTGACTGTTATGCTTTGTGCTCAACCTGTCAGTGGGCCATCAGAATCAGGAGGTTCTGGTGGGAAAGATAAAACCAAAAAACCTGCTTGCGATGATATCATAGGGCTTGATTCCTTGAAACAGTTCTTGTTATACATAGCCAAAGGTACTGAGATTAAGAAAGATACCCGAGTAAAAAAGAGCATTCTCTGTGCGGCTGGCAAGATGGAAATTCGATCAGATCTGATGGATTCTCATATATATGCCTTCAAGAGAGCAGTTCTGCAGGAAGTTTTGGATCAAAAACCTGCTTTTAGGAGCCTAAAACAGGATGTACTACCGTATCTTGTTCGTACACAGCTGAGATCAGATGTCTTCTCTGACCAAAGTAATGTAGAAGAAAATGGGAATGGAAATGGAAAAAATAATATGCAGAACAACGAGGTGGTCTTGTCTCAAATTCTCTCCAACGCATCCATGCCAAGCTTTCATCAAGTCTATGAATCAGGTCTGGGTACCCGGAAAACCCATAAATGCTGTGTTTATATAGCGGATGAAAGTAAGTATTTCGTCCGCTTGAATAGCATTCAAGCCTTCATGGACGTAAACAGAGATGTTATTGGTGAATCAAACCACCTATCTGGATACTCCTTTTCTGCTCATCACAACATTGTCCACCCATCAGCTGAGCTTGGATCGAAAACCACAGTTGGACCTCATTGTATGCTTGGAGAAGGCTCTCAAGTCGGTGATAAATGCAGTGTCAAAAGATCTGTAATTGGGAGACATTGCCGGATAGGCTCCAATGTGAAGATTGTTAATTCAGTTGTGATGGACCATGCCACAATTGGAGACGGATGTTCAATACAAGGCTCAGTCATTTGCAGCAACGCACAGCTTCAAGAGCGTGTTACTCTAAGAGACTGCCAAGTGGAAGCAGGGTATGTTGTTTGTGCCGGGAGTGAGCACAAAGGAGAGACCTTTGCTAGAAAATGA

Protein Analysis

456

Amino Acids

49.04

Weight (kDa)

7.23

Isoelectric Point (pI)

37.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NTP_transferase PF00483 5 - 147 2.9e-13 Nucleotidyl transferase
NTP_transf_3 PF12804 5 - 130 2.6e-10 MobA-like NTP transferase domain
GMPPB_C PF25087 348 - 436 2e-13 GMPPB C-terminal domain
LbH_EIF2B PF25084 352 - 436 1.4e-22 EIF2B subunit epsilon LbH domain
Hexapep_GlmU PF24894 366 - 429 9.5e-07 GlmU-like, C-terminal hexapeptide
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 487, 691
Acc65I GGTACC 1 cut(s) 890
AccB1I GGYRCC 1 cut(s) 890
AciI CCGC 5 cut(s) 30, 369, 590, 926, 949
AclWI GGATC 4 cut(s) 132, 159, 681, 1078
AcsI RAATTY 2 cut(s) 606, 834
AfaI GTAC 4 cut(s) 544, 711, 730, 892
AfiI CCNNNNNNNGG 2 cut(s) 428, 703
AflIII ACRYGT 1 cut(s) 232
AgsI TTSAA 8 cut(s) 170, 190, 514, 646, 955, 965, 1239, 1277
AjnI CCWGG 2 cut(s) 9, 355
AluBI AGCT 5 cut(s) 736, 861, 1061, 1066, 1273
AluI AGCT 5 cut(s) 736, 861, 1061, 1066, 1273
Alw21I GWGCWC 2 cut(s) 418, 1344
Alw26I GTCTC 6 cut(s) 327, 834, 1153, 1221, 1290, 1346
AlwI GGATC 4 cut(s) 132, 159, 681, 1078
AlwNI CAGNNNCTG 1 cut(s) 401
Ama87I CYCGRG 2 cut(s) 131, 564
AoxI GGCC 1 cut(s) 431
ApeKI GCWGC 4 cut(s) 182, 245, 392, 1260
ApoI RAATTY 2 cut(s) 606, 834
Asp700I GAANNNNTTC 1 cut(s) 518
Asp718I GGTACC 1 cut(s) 890
AspS9I GGNCC 3 cut(s) 431, 1088, 1210
AsuC2I CCSGG 2 cut(s) 895, 1333
AsuHPI GGTGA 2 cut(s) 1010, 1136
AvaI CYCGRG 2 cut(s) 131, 564
AvaII GGWCC 2 cut(s) 1088, 1210
AxyI CCTNAGG 1 cut(s) 75
BaeGI GKGCMC 1 cut(s) 280
BaeI ACNNNNGTAYC 4 cut(s) 552, 585, 701, 734
BanI GGYRCC 1 cut(s) 890
BbsI GAAGAC 1 cut(s) 742
Bbv12I GWGCWC 2 cut(s) 418, 1344
BbvI GCAGC 4 cut(s) 169, 232, 404, 1272
BccI CCATC 6 cut(s) 195, 442, 595, 616, 1063, 1201
BciT130I CCWGG 2 cut(s) 11, 357
BciVI GTATCC 1 cut(s) 1013
BcnI CCSGG 2 cut(s) 895, 1333
BcoDI GTCTC 6 cut(s) 327, 834, 1153, 1221, 1290, 1346
BfaI CTAG 3 cut(s) 23, 39, 1362
BfmI CTRYAG 1 cut(s) 659
BfuAI ACCTGC 2 cut(s) 487, 691
BfuI GTATCC 1 cut(s) 1013
BglI GCCNNNNNGGC 1 cut(s) 1173
BglII AGATCT 2 cut(s) 616, 1145
BisI GCNGC 6 cut(s) 183, 246, 369, 393, 591, 1261
BlpI GCTNAGC 1 cut(s) 1062
BlsI GCNGC 6 cut(s) 184, 247, 370, 394, 592, 1262
Bme1390I CCNGG 4 cut(s) 11, 357, 895, 1333
Bme18I GGWCC 2 cut(s) 1088, 1210
BmeT110I CYCGRG 2 cut(s) 131, 564
BmgT120I GGNCC 3 cut(s) 431, 1088, 1210
BmiI GGNNCC 3 cut(s) 695, 892, 1177
BmrFI CCNGG 4 cut(s) 11, 357, 895, 1333
BmsI GCATC 3 cut(s) 169, 379, 857
BpiI GAAGAC 1 cut(s) 742
Bpu1102I GCTNAGC 1 cut(s) 1062
BpuEI CTTGAG 2 cut(s) 131, 1101
BpuMI CCSGG 2 cut(s) 895, 1333
BsaI GGTCTC 1 cut(s) 1346
BsaJI CCNNGG 1 cut(s) 63
BsaWI WCCGGW 1 cut(s) 103
BsaXI ACNNNNNCTCC 2 cut(s) 324, 354
Bsc4I CCNNNNNNNGG 2 cut(s) 428, 703
Bse118I RCCGGY 1 cut(s) 26
Bse21I CCTNAGG 1 cut(s) 75
Bse3DI GCAATG 1 cut(s) 1162
BseBI CCWGG 2 cut(s) 11, 357
BseDI CCNNGG 1 cut(s) 63
BseGI GGATG 5 cut(s) 206, 712, 848, 934, 1238
BseLI CCNNNNNNNGG 2 cut(s) 428, 703
BseMI GCAATG 1 cut(s) 1162
BseMII CTCAG 6 cut(s) 246, 295, 537, 728, 1053, 1263
BseSI GKGCMC 1 cut(s) 280
BseXI GCAGC 4 cut(s) 169, 232, 404, 1272
BseYI CCCAGC 1 cut(s) 272
BshFI GGCC 1 cut(s) 433
BshNI GGYRCC 1 cut(s) 890
BsiHKAI GWGCWC 2 cut(s) 418, 1344
BsiHKCI CYCGRG 2 cut(s) 131, 564
BsiSI CCGG 5 cut(s) 27, 104, 895, 1168, 1332
BslI CCNNNNNNNGG 2 cut(s) 428, 703
BsmAI GTCTC 6 cut(s) 327, 834, 1153, 1221, 1290, 1346
BsmBI CGTCTC 1 cut(s) 1221
BsmI GAATGC 2 cut(s) 579, 960
BsnI GGCC 1 cut(s) 433
Bso31I GGTCTC 1 cut(s) 1346
BsoBI CYCGRG 2 cut(s) 131, 564
Bsp1286I GDGCHC 3 cut(s) 280, 418, 1344
Bsp1720I GCTNAGC 1 cut(s) 1062
BspACI CCGC 5 cut(s) 30, 369, 590, 926, 949
BspANI GGCC 1 cut(s) 433
BspCNI CTCAG 6 cut(s) 247, 294, 538, 729, 1054, 1262
BspLI GGNNCC 3 cut(s) 695, 892, 1177
BspMAI CTGCAG 1 cut(s) 663
BspMI ACCTGC 2 cut(s) 487, 691
BspPI GGATC 4 cut(s) 132, 159, 681, 1078
BspT107I GGYRCC 1 cut(s) 890
BspTNI GGTCTC 1 cut(s) 1346
BsrDI GCAATG 1 cut(s) 1162
BsrFI RCCGGY 1 cut(s) 26
BssAI RCCGGY 1 cut(s) 26
BssECI CCNNGG 1 cut(s) 63
BssT1I CCWWGG 1 cut(s) 63
Bst2UI CCWGG 2 cut(s) 11, 357
Bst4CI ACNGT 4 cut(s) 403, 519, 717, 1084
BstC8I GCNNGC 3 cut(s) 28, 484, 595
BstDEI CTNAG 9 cut(s) 55, 75, 255, 281, 546, 737, 1062, 1249, 1292
BstENI CCTNNNNNAGG 1 cut(s) 701
BstF5I GGATG 5 cut(s) 206, 712, 848, 934, 1238
BstMAI GTCTC 6 cut(s) 327, 834, 1153, 1221, 1290, 1346
BstMWI GCNNNNNNNGC 6 cut(s) 251, 284, 368, 957, 1173, 1279
BstNI CCWGG 2 cut(s) 11, 357
BstNSI RCATGY 1 cut(s) 236
BstSCI CCNGG 4 cut(s) 9, 355, 893, 1331
BstSFI CTRYAG 1 cut(s) 659
BstSLI GKGCMC 1 cut(s) 280
BstV1I GCAGC 4 cut(s) 169, 232, 404, 1272
BstV2I GAAGAC 1 cut(s) 742
BstX2I RGATCY 4 cut(s) 124, 151, 616, 1145
BstXI CCANNNNNNTGG 1 cut(s) 1016
BstYI RGATCY 4 cut(s) 124, 151, 616, 1145
Bsu36I CCTNAGG 1 cut(s) 75
BsuI GTATCC 1 cut(s) 1013
BsuRI GGCC 1 cut(s) 433
BtgZI GCGATG 1 cut(s) 501
BtsCI GGATG 5 cut(s) 206, 712, 848, 934, 1238
BtsI GCAGTG 2 cut(s) 402, 1141
BtsIMutI CAGTG 3 cut(s) 402, 433, 1141
BveI ACCTGC 2 cut(s) 487, 691
Cac8I GCNNGC 3 cut(s) 28, 484, 595
CaiI CAGNNNCTG 1 cut(s) 401
Cfr10I RCCGGY 1 cut(s) 26
Cfr13I GGNCC 3 cut(s) 431, 1088, 1210
Csp6I GTAC 4 cut(s) 543, 710, 729, 891
CviAII CATG 5 cut(s) 233, 386, 853, 973, 1214
CviQI GTAC 4 cut(s) 543, 710, 729, 891
DdeI CTNAG 9 cut(s) 55, 75, 255, 281, 546, 737, 1062, 1249, 1292
EciI GGCGGA 1 cut(s) 45
Eco130I CCWWGG 1 cut(s) 63
Eco31I GGTCTC 1 cut(s) 1346
Eco32I GATATC 1 cut(s) 493
Eco47I GGWCC 2 cut(s) 1088, 1210
Eco81I CCTNAGG 1 cut(s) 75
Eco88I CYCGRG 2 cut(s) 131, 564
EcoNI CCTNNNNNAGG 1 cut(s) 701
EcoRII CCWGG 2 cut(s) 9, 355
EcoRV GATATC 1 cut(s) 493
EcoT14I CCWWGG 1 cut(s) 63
ErhI CCWWGG 1 cut(s) 63
Esp3I CGTCTC 1 cut(s) 1221
FaeI CATG 5 cut(s) 236, 389, 856, 976, 1217
FatI CATG 5 cut(s) 232, 385, 852, 972, 1213
Fnu4HI GCNGC 6 cut(s) 183, 246, 369, 393, 591, 1261
FokI GGATG 5 cut(s) 213, 719, 835, 941, 1245
Fsp4HI GCNGC 6 cut(s) 183, 246, 369, 393, 591, 1261
FspBI CTAG 3 cut(s) 23, 39, 1362
GluI GCNGC 6 cut(s) 183, 246, 369, 393, 591, 1261
GsaI CCCAGC 1 cut(s) 276
HaeIII GGCC 1 cut(s) 433
HapII CCGG 5 cut(s) 27, 104, 895, 1168, 1332
Hin1II CATG 5 cut(s) 236, 389, 856, 976, 1217
HindIII AAGCTT 1 cut(s) 859
HinfI GANTC 8 cut(s) 19, 33, 97, 440, 506, 626, 878, 1001
HpaII CCGG 5 cut(s) 27, 104, 895, 1168, 1332
HphI GGTGA 2 cut(s) 1010, 1136
Hpy166II GTNNAC 4 cut(s) 230, 731, 982, 1051
Hpy188I TCNGA 7 cut(s) 156, 346, 439, 616, 621, 745, 757
Hpy188III TCNNGA 8 cut(s) 16, 122, 131, 133, 444, 646, 1017, 1277
Hpy8I GTNNAC 4 cut(s) 230, 731, 982, 1051
Hpy99I CGWCG 1 cut(s) 164
HpyAV CCTTC 5 cut(s) 164, 375, 652, 979, 1103
HpyCH4III ACNGT 4 cut(s) 403, 519, 717, 1084
HpyCH4IV ACGT 2 cut(s) 117, 978
HpyCH4V TGCA 6 cut(s) 293, 392, 661, 808, 1134, 1260
HpyF10VI GCNNNNNNNGC 6 cut(s) 251, 284, 368, 957, 1173, 1279
HpyF3I CTNAG 9 cut(s) 55, 75, 255, 281, 546, 737, 1062, 1249, 1292
HpySE526I ACGT 2 cut(s) 117, 978
Hsp92II CATG 5 cut(s) 236, 389, 856, 976, 1217
KpnI GGTACC 1 cut(s) 894
KroI GCCGGC 1 cut(s) 26
KroNI GCCGGC 1 cut(s) 28
LmnI GCTCC 2 cut(s) 693, 1181
Lsp1109I GCAGC 4 cut(s) 169, 232, 404, 1272
LweI GCATC 3 cut(s) 169, 379, 857
MaeI CTAG 3 cut(s) 23, 39, 1362
MaeII ACGT 2 cut(s) 117, 978
MaeIII GTNAC 2 cut(s) 397, 1285
MboII GAAGA 6 cut(s) 119, 188, 201, 742, 785, 1198
MfeI CAATTG 2 cut(s) 288, 1221
MflI RGATCY 4 cut(s) 124, 151, 616, 1145
MhlI GDGCHC 3 cut(s) 280, 418, 1344
MluCI AATT 6 cut(s) 288, 606, 834, 1152, 1195, 1221
MmeI TCCRAC 3 cut(s) 244, 867, 1066
MnlI CCTC 5 cut(s) 232, 363, 440, 811, 1101
MroNI GCCGGC 1 cut(s) 26
MroXI GAANNNNTTC 1 cut(s) 518
MseI TTAA 3 cut(s) 302, 552, 1194
MslI CAYNNNNRTG 1 cut(s) 636
MspA1I CMGCKG 2 cut(s) 736, 1061
MspI CCGG 5 cut(s) 27, 104, 895, 1168, 1332
MspR9I CCNGG 4 cut(s) 11, 357, 895, 1333
MunI CAATTG 2 cut(s) 288, 1221
Mva1269I GAATGC 2 cut(s) 579, 960
MvaI CCWGG 2 cut(s) 11, 357
MwoI GCNNNNNNNGC 6 cut(s) 251, 284, 368, 957, 1173, 1279
NaeI GCCGGC 1 cut(s) 28
NciI CCSGG 2 cut(s) 895, 1333
NgoMIV GCCGGC 1 cut(s) 26
NlaIII CATG 5 cut(s) 236, 389, 856, 976, 1217
NlaIV GGNNCC 3 cut(s) 695, 892, 1177
NmuCI GTSAC 1 cut(s) 397
NspI RCATGY 1 cut(s) 236
PaeR7I CTCGAG 1 cut(s) 131
PciI ACATGT 1 cut(s) 232
PctI GAATGC 2 cut(s) 579, 960
PdiI GCCGGC 1 cut(s) 28
PdmI GAANNNNTTC 1 cut(s) 518
PfeI GAWTC 8 cut(s) 19, 33, 97, 440, 506, 626, 878, 1001
PkrI GCNGC 6 cut(s) 184, 247, 370, 394, 592, 1262
PscI ACATGT 1 cut(s) 232
Psp6I CCWGG 2 cut(s) 9, 355
PspFI CCCAGC 1 cut(s) 272
PspGI CCWGG 2 cut(s) 9, 355
PspN4I GGNNCC 3 cut(s) 695, 892, 1177
PspPI GGNCC 3 cut(s) 431, 1088, 1210
PstI CTGCAG 1 cut(s) 663
PstNI CAGNNNCTG 1 cut(s) 401
PsuI RGATCY 4 cut(s) 124, 151, 616, 1145
PvuII CAGCTG 2 cut(s) 736, 1061
RsaI GTAC 4 cut(s) 544, 711, 730, 892
RsaNI GTAC 4 cut(s) 543, 710, 729, 891
RseI CAYNNNNRTG 1 cut(s) 636
SaqAI TTAA 3 cut(s) 302, 552, 1194
SatI GCNGC 6 cut(s) 183, 246, 369, 393, 591, 1261
Sau96I GGNCC 3 cut(s) 431, 1088, 1210
ScrFI CCNGG 4 cut(s) 11, 357, 895, 1333
SduI GDGCHC 3 cut(s) 280, 418, 1344
SfaNI GCATC 3 cut(s) 169, 379, 857
SfcI CTRYAG 1 cut(s) 659
Sfr274I CTCGAG 1 cut(s) 131
SinI GGWCC 2 cut(s) 1088, 1210
SlaI CTCGAG 1 cut(s) 131
SmiMI CAYNNNNRTG 1 cut(s) 636
SmlI CTYRAG 3 cut(s) 131, 146, 1116
SmoI CTYRAG 3 cut(s) 131, 146, 1116
Sse9I AATT 6 cut(s) 288, 606, 834, 1152, 1195, 1221
SsiI CCGC 5 cut(s) 30, 369, 590, 926, 949
SspMI CTAG 3 cut(s) 23, 39, 1362
StyD4I CCNGG 4 cut(s) 9, 355, 893, 1331
StyI CCWWGG 1 cut(s) 63
TaaI ACNGT 4 cut(s) 403, 519, 717, 1084
TaiI ACGT 2 cut(s) 120, 981
TaqI TCGA 3 cut(s) 132, 610, 1073
TasI AATT 6 cut(s) 288, 606, 834, 1152, 1195, 1221
TatI WGTACW 1 cut(s) 709
TauI GCSGC 2 cut(s) 371, 593
TfiI GAWTC 8 cut(s) 19, 33, 97, 440, 506, 626, 878, 1001
Tru1I TTAA 3 cut(s) 302, 552, 1194
Tru9I TTAA 3 cut(s) 302, 552, 1194
TscAI CASTG 3 cut(s) 402, 433, 1141
TseFI GTSAC 1 cut(s) 397
TseI GCWGC 4 cut(s) 182, 245, 392, 1260
Tsp45I GTSAC 1 cut(s) 397
TspDTI ATGAA 4 cut(s) 854, 891, 945, 961
TspGWI ACGGA 1 cut(s) 1245
TspRI CASTG 3 cut(s) 402, 433, 1141
VpaK11BI GGWCC 2 cut(s) 1088, 1210
XagI CCTNNNNNAGG 1 cut(s) 701
XapI RAATTY 2 cut(s) 606, 834
XceI RCATGY 1 cut(s) 236
XcmI CCANNNNNNNNNTGG 1 cut(s) 1220
XhoI CTCGAG 1 cut(s) 131
XmnI GAANNNNTTC 1 cut(s) 518
XspI CTAG 3 cut(s) 23, 39, 1362
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.