Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

tig00012527_4311101_to_5153684

Orthogroup ID

OG0006736

Physical Location & Seq

Genomic Coordinates Forward (+)

319035 .. 324237

Gene Structure 5203 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom5153684g00170.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGTCTCGAGCCTCCAGCCTCGATTCAAAAGGCGTTTGGATTGGAAATTCTAGCAGGTTGGAAGATCAGTCAGAGGTCGTGGCAAAGACTACAGCAGCCCATCATTTGCTACTGCCGCAGACAAACAGTCGTACTCGAGCCCAACATCTCCTTCTCCGCCATCTCTGGCGGACGAACCTCTGTTGGGACTTAGCCCACCCTCGCTCGCTCTGCTTCCTGTGGAGACAAAAACGCCTAAAAGGGAGCCTGAACCCTTCTCTCTCCCCCCCCCCCTCTCCCTCTCTCCCTCTCTGCTGCTGCTCCGATGGATTTCCAAGTGGTAGTCTTAGCCGGTGGCACCTCGAAGAAACTTGTCCCTCTAGTCTCCAAGGGCAGGAGGTCCCAAAGGCTCTGCTTCCGGTGGCGAACCGTCCGGTTATCTCCTACGTTCTGGAGCTCTTAGAACTCAGTAACCTTAAGAACCTCATAGTTGTTGTTGAAGGGCAAGATGCAGCCGTACTCGTTGGAAGTTGGATTTCAGGGGCTTATGTCGATCGTTTACATGTTGAGGTTGCGGCAGTCCCTGAGGATGTTGGAACAGCTGGTGCACTTCGGGCCATTGCACACCACTTGACTGCAAAAGACATTTTGGTTGTGAGTGGTGATATTGTCTCTGATGTTTCTCCTGGTGCTGTAGCTGCTGCTCATAGACGTCATGATGCAGTATTAACTGCAATGCTTTGTTCTGCTCCTGTAAGTGGACCTTCAGATTCGGGATCCTCTGTTGGAAAAGACAAAGCCAAGAAACCAGGGCACTACAATATCATTGGGCTGGATCCGACAAAGCAGTTTTTACTGTACATAGAGCGGAACTTGAGAAAGATATTCGAATTCAGAAGAGCATACTCCGTGCAGTCGGCCAGATGGAAATTCGATCTGATCGATCATGGATGCTCATTTATATGCGTTCAAGAGGTCTGTTCTACAAGAAGTTTTGGATCAAAAGGATACCTTTCAAAGTTTAAAGCACGATGTATTGCCTTATCTTGTTCGTCGCCAAATTCAGAAGTGTCAAATGGTGCACCACAACCAGAAGAAAATGGAAATGAGAAGCCTAGTTCTCAGAGCAACCAACTAGTGATATCTCGAATCCTGGCTAATTCATCCACTCCAAGCTTCCATGAGCTCTATGCACTAGGTTGTAATGGATCTACTCCTGCACAAAGAACCCATAAATGCTGTGTTTATATTGCTGGAAACAGCAAGTACTGTGTGAGGTTAAATTCCATTCAAGCATTCAGTGACATTAATCGAGATGTCATAGGAGATGCTAGCCATTTGTCAGGGTATTCATTCTCTGCACAAAATAACATCATCCATCCGTCAGCAGAACTTGGATCTAAAACGACTGTCGGACCACATTGTATGCTTGGGGAAGGTTCACAGATGGGTGACAAATGTAGTGTTAAACGATCGATTGTTATTGGTCGTCACTGCCGGATAGGTTCTAACGTGAAGGTTGTGAATTCAGTTGTTATGAATCATGTTACCATTGGCGATGGTTGTTCAGTCCAGAATTCAGTTATTTGCAGTAACGTACAGCTCCAAGATCGTGTTGTACTTAAAGATTGTCAAGTCGGTGCAGGTTTCGTGGTTCCTGCTGGAAGTGAGTGCAAAGGGGAGGTATTTGCTAAGAAAGAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002253 GO:0002376 GO:0002429 GO:0002682 GO:0002684 GO:0002757 GO:0002764 GO:0002768 GO:0003674 GO:0005085 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005851 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007275 GO:0007399 GO:0007417 GO:0007420 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009408 GO:0009628 GO:0009719 GO:0009725 GO:0009743 GO:0009746 GO:0009749 GO:0009987 GO:0010001 GO:0010033 GO:0010243 GO:0010467 GO:0014003 GO:0019538 GO:0019899 GO:0021537 GO:0021543 GO:0021761 GO:0021766 GO:0021782 GO:0022008 GO:0023052 GO:0030154 GO:0030900 GO:0032501 GO:0032502 GO:0032991 GO:0034284 GO:0034641 GO:0034645 GO:0042063 GO:0042221 GO:0043043 GO:0043170 GO:0043434 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0048468 GO:0048513 GO:0048518 GO:0048583 GO:0048584 GO:0048709 GO:0048731 GO:0048856 GO:0048869 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050851 GO:0050852 GO:0050896 GO:0051020 GO:0051716 GO:0060322 GO:0065007 GO:0065009 GO:0071704 GO:0098772 GO:1901564 GO:1901566 GO:1901576 GO:1901652 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Hexapep NTP_transf_3 NTP_transferase

Protein Analysis

562

Amino Acids

60.51

Weight (kDa)

8.85

Isoelectric Point (pI)

47.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006736)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19485
fragaria_vesca	FvH4_1g25390
malus_domestica	MD03G1163000.v1.1
prunus_persica	Prupe.4G269500_v2.0.a1 Prupe.4G269500_v2.0.a1 Prupe.4G269500_v2.0.a1 Prupe.4G269500_v2.0.a1 Prupe.4G269500_v2.0.a1 Prupe.4G269500_v2.0.a1
pyrus_communis	pycom12561g00150 pycom5153684g00170
rosa_chinensis	RchiOBHm_Chr2g0123421
rosa_laevigata	RLG00000018753 RLG00000036275
rosa_multiflora	Rmu_sc0018866.1_g000001
rosa_roxburghii	Rroxscaffold_2G00093620 Rroxscaffold_2G00120680 Rroxscaffold_5G00351380
rosa_rugosa	Rorug02G0245500 Rorug02G0245500
rosa_samantha	Rh2AG304300 Rh2BG312300 Rh2CG290800 Rh2DG328300 Rh5AG454400
rosa_wichuraiana	Rw2G024360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	694
Acc36I	ACCTGC	2 cut(s)	45, 1613
AccB1I	GGYRCC	1 cut(s)	336
AccBSI	CCGCTC	1 cut(s)	847
AciI	CCGC	5 cut(s)	116, 157, 169, 554, 847
AclWI	GGATC	7 cut(s)	750, 763, 809, 822, 985, 1195, 1384
AcoI	YGGCCR	1 cut(s)	897
AcsI	RAATTY	7 cut(s)	46, 869, 908, 1039, 1261, 1504, 1555
AcuI	CTGAAG	1 cut(s)	729
AcyI	GRCGYC	1 cut(s)	691
AfaI	GTAC	6 cut(s)	133, 498, 839, 1247, 1578, 1599
AfiI	CCNNNNNNNGG	3 cut(s)	184, 373, 737
AflII	CTTAAG	1 cut(s)	455
AflIII	ACRYGT	1 cut(s)	541
AgsI	TTSAA	5 cut(s)	27, 479, 950, 996, 1271
AhdI	GACNNNNNGTC	1 cut(s)	126
AhlI	ACTAGT	1 cut(s)	1114
AjnI	CCWGG	3 cut(s)	664, 787, 1131
AjuI	GAANNNNNNNTTGG	2 cut(s)	135, 167
AluBI	AGCT	6 cut(s)	436, 581, 677, 1155, 1165, 1582
AluI	AGCT	6 cut(s)	436, 581, 677, 1155, 1165, 1582
Alw21I	GWGCWC	4 cut(s)	438, 589, 1063, 1167
Alw26I	GTCTC	4 cut(s)	9, 217, 368, 655
Alw44I	GTGCAC	2 cut(s)	585, 1059
AlwI	GGATC	7 cut(s)	750, 763, 809, 822, 985, 1195, 1384
AlwNI	CAGNNNCTG	1 cut(s)	563
Ama87I	CYCGRG	2 cut(s)	6, 135
AoxI	GGCC	2 cut(s)	594, 897
ApaLI	GTGCAC	2 cut(s)	585, 1059
ApeKI	GCWGC	6 cut(s)	95, 294, 297, 491, 677, 680
ApoI	RAATTY	7 cut(s)	46, 869, 908, 1039, 1261, 1504, 1555
AseI	ATTAAT	1 cut(s)	1287
AspS9I	GGNCC	4 cut(s)	379, 594, 740, 1394
AsuHPI	GGTGA	2 cut(s)	653, 1442
AsuII	TTCGAA	1 cut(s)	867
AsuNHI	GCTAGC	1 cut(s)	1310
AvaI	CYCGRG	2 cut(s)	6, 135
AvaII	GGWCC	3 cut(s)	379, 740, 1394
AxyI	CCTNAGG	1 cut(s)	564
BaeGI	GKGCMC	3 cut(s)	589, 795, 1063
BamHI	GGATCC	2 cut(s)	755, 814
BanI	GGYRCC	1 cut(s)	336
BanII	GRGCYC	3 cut(s)	142, 438, 1167
Bbv12I	GWGCWC	4 cut(s)	438, 589, 1063, 1167
BbvI	GCAGC	6 cut(s)	107, 281, 284, 503, 664, 667
BccI	CCATC	7 cut(s)	108, 168, 299, 897, 1365, 1420, 1532
BceAI	ACGGC	1 cut(s)	479
BciT130I	CCWGG	3 cut(s)	666, 789, 1133
BciVI	GTATCC	1 cut(s)	980
BcoDI	GTCTC	4 cut(s)	9, 217, 368, 655
BcuI	ACTAGT	1 cut(s)	1114
BfaI	CTAG	6 cut(s)	51, 360, 1095, 1115, 1175, 1311
BfmI	CTRYAG	2 cut(s)	90, 672
BfrI	CTTAAG	1 cut(s)	455
BfuAI	ACCTGC	2 cut(s)	45, 1613
BfuI	GTATCC	1 cut(s)	980
BisI	GCNGC	8 cut(s)	96, 116, 295, 298, 492, 555, 678, 681
BlsI	GCNGC	8 cut(s)	97, 117, 296, 299, 493, 556, 679, 682
BmcAI	AGTACT	1 cut(s)	1247
Bme1390I	CCNGG	3 cut(s)	666, 789, 1133
Bme18I	GGWCC	3 cut(s)	379, 740, 1394
BmeRI	GACNNNNNGTC	1 cut(s)	126
BmeT110I	CYCGRG	2 cut(s)	6, 135
BmgT120I	GGNCC	4 cut(s)	379, 594, 740, 1394
BmiI	GGNNCC	6 cut(s)	245, 338, 381, 757, 816, 1635
BmrFI	CCNGG	3 cut(s)	666, 789, 1133
BmsI	GCATC	4 cut(s)	478, 688, 920, 1297
BmtI	GCTAGC	1 cut(s)	1314
BpmI	CTGGAG	1 cut(s)	452
Bpu14I	TTCGAA	1 cut(s)	867
BpuEI	CTTGAG	1 cut(s)	874
Bsa29I	ATCGAT	2 cut(s)	921, 1454
BsaHI	GRCGYC	1 cut(s)	691
BsaJI	CCNNGG	2 cut(s)	367, 788
BsaWI	WCCGGW	2 cut(s)	397, 412
Bsc4I	CCNNNNNNNGG	3 cut(s)	184, 373, 737
Bse118I	RCCGGY	1 cut(s)	330
Bse21I	CCTNAGG	1 cut(s)	564
Bse3DI	GCAATG	2 cut(s)	597, 720
BseBI	CCWGG	3 cut(s)	666, 789, 1133
BseCI	ATCGAT	2 cut(s)	921, 1454
BseDI	CCNNGG	2 cut(s)	367, 788
BseGI	GGATG	5 cut(s)	574, 935, 1142, 1353, 1357
BseLI	CCNNNNNNNGG	3 cut(s)	184, 373, 737
BseMI	GCAATG	2 cut(s)	597, 720
BseMII	CTCAG	3 cut(s)	460, 555, 1115
BseSI	GKGCMC	3 cut(s)	589, 795, 1063
BseXI	GCAGC	6 cut(s)	107, 281, 284, 503, 664, 667
BsgI	GTGCAG	4 cut(s)	911, 1182, 1323, 1641
Bsh1285I	CGRYCG	2 cut(s)	535, 1454
BshFI	GGCC	2 cut(s)	596, 899
BshNI	GGYRCC	1 cut(s)	336
BshVI	ATCGAT	2 cut(s)	921, 1454
BsiEI	CGRYCG	2 cut(s)	535, 1454
BsiHKAI	GWGCWC	4 cut(s)	438, 589, 1063, 1167
BsiHKCI	CYCGRG	2 cut(s)	6, 135
BsiSI	CCGG	4 cut(s)	331, 398, 413, 1477
BslFI	GGGAC	4 cut(s)	200, 339, 365, 545
BslI	CCNNNNNNNGG	3 cut(s)	184, 373, 737
BsmAI	GTCTC	4 cut(s)	9, 217, 368, 655
BsmFI	GGGAC	4 cut(s)	200, 339, 365, 545
BsmI	GAATGC	1 cut(s)	1274
BsnI	GGCC	2 cut(s)	596, 899
BsoBI	CYCGRG	2 cut(s)	6, 135
Bsp119I	TTCGAA	1 cut(s)	867
Bsp1286I	GDGCHC	6 cut(s)	142, 438, 589, 795, 1063, 1167
Bsp1407I	TGTACA	1 cut(s)	837
BspACI	CCGC	5 cut(s)	116, 157, 169, 554, 847
BspANI	GGCC	2 cut(s)	596, 899
BspCNI	CTCAG	3 cut(s)	459, 556, 1114
BspDI	ATCGAT	2 cut(s)	921, 1454
BspHI	TCATGA	1 cut(s)	694
BspLI	GGNNCC	6 cut(s)	245, 338, 381, 757, 816, 1635
BspMI	ACCTGC	2 cut(s)	45, 1613
BspOI	GCTAGC	1 cut(s)	1314
BspPI	GGATC	7 cut(s)	750, 763, 809, 822, 985, 1195, 1384
BspQI	GCTCTTC	1 cut(s)	871
BspT104I	TTCGAA	1 cut(s)	867
BspT107I	GGYRCC	1 cut(s)	336
BspTI	CTTAAG	1 cut(s)	455
BsrBI	CCGCTC	1 cut(s)	847
BsrDI	GCAATG	2 cut(s)	597, 720
BsrFI	RCCGGY	1 cut(s)	330
BsrGI	TGTACA	1 cut(s)	837
BssAI	RCCGGY	1 cut(s)	330
BssECI	CCNNGG	2 cut(s)	367, 788
BssNI	GRCGYC	1 cut(s)	691
BssT1I	CCWWGG	1 cut(s)	367
Bst2UI	CCWGG	3 cut(s)	666, 789, 1133
Bst4CI	ACNGT	5 cut(s)	128, 410, 837, 1250, 1390
Bst6I	CTCTTC	1 cut(s)	871
BstACI	GRCGYC	1 cut(s)	691
BstAFI	CTTAAG	1 cut(s)	455
BstAUI	TGTACA	1 cut(s)	837
BstBI	TTCGAA	1 cut(s)	867
BstC8I	GCNNGC	2 cut(s)	206, 1312
BstDEI	CTNAG	7 cut(s)	190, 326, 439, 446, 564, 1101, 1671
BstF5I	GGATG	5 cut(s)	574, 935, 1142, 1353, 1357
BstMAI	GTCTC	4 cut(s)	9, 217, 368, 655
BstMCI	CGRYCG	2 cut(s)	535, 1454
BstMWI	GCNNNNNNNGC	4 cut(s)	115, 210, 593, 677
BstNI	CCWGG	3 cut(s)	666, 789, 1133
BstNSI	RCATGY	1 cut(s)	545
BstSCI	CCNGG	3 cut(s)	664, 787, 1131
BstSFI	CTRYAG	2 cut(s)	90, 672
BstSLI	GKGCMC	3 cut(s)	589, 795, 1063
BstV1I	GCAGC	6 cut(s)	107, 281, 284, 503, 664, 667
BstX2I	RGATCY	4 cut(s)	755, 814, 1187, 1376
BstYI	RGATCY	4 cut(s)	755, 814, 1187, 1376
Bsu15I	ATCGAT	2 cut(s)	921, 1454
Bsu36I	CCTNAGG	1 cut(s)	564
BsuI	GTATCC	1 cut(s)	980
BsuRI	GGCC	2 cut(s)	596, 899
BsuTUI	ATCGAT	2 cut(s)	921, 1454
BtgZI	GCGATG	1 cut(s)	1551
BtsCI	GGATG	5 cut(s)	574, 935, 1142, 1353, 1357
BtsI	GCAGTG	1 cut(s)	1471
BtsIMutI	CAGTG	2 cut(s)	1285, 1471
BveI	ACCTGC	2 cut(s)	45, 1613
Cac8I	GCNNGC	2 cut(s)	206, 1312
CaiI	CAGNNNCTG	1 cut(s)	563
CciI	TCATGA	1 cut(s)	694
Cfr10I	RCCGGY	1 cut(s)	330
Cfr13I	GGNCC	4 cut(s)	379, 594, 740, 1394
ClaI	ATCGAT	2 cut(s)	921, 1454
Csp6I	GTAC	6 cut(s)	132, 497, 838, 1246, 1577, 1598
CviAII	CATG	5 cut(s)	542, 695, 926, 1160, 1523
CviQI	GTAC	6 cut(s)	132, 497, 838, 1246, 1577, 1598
DdeI	CTNAG	7 cut(s)	190, 326, 439, 446, 564, 1101, 1671
DraI	TTTAAA	1 cut(s)	1003
DriI	GACNNNNNGTC	1 cut(s)	126
EaeI	YGGCCR	1 cut(s)	897
Eam1104I	CTCTTC	1 cut(s)	871
Eam1105I	GACNNNNNGTC	1 cut(s)	126
EarI	CTCTTC	1 cut(s)	871
EciI	GGCGGA	2 cut(s)	146, 184
Ecl136II	GAGCTC	2 cut(s)	436, 1165
Eco130I	CCWWGG	1 cut(s)	367
Eco24I	GRGCYC	3 cut(s)	142, 438, 1167
Eco32I	GATATC	1 cut(s)	1122
Eco47I	GGWCC	3 cut(s)	379, 740, 1394
Eco53kI	GAGCTC	2 cut(s)	436, 1165
Eco57I	CTGAAG	1 cut(s)	729
Eco81I	CCTNAGG	1 cut(s)	564
Eco88I	CYCGRG	2 cut(s)	6, 135
EcoICRI	GAGCTC	2 cut(s)	436, 1165
EcoO109I	RGGNCCY	1 cut(s)	379
EcoRI	GAATTC	3 cut(s)	869, 1504, 1555
EcoRII	CCWGG	3 cut(s)	664, 787, 1131
EcoRV	GATATC	1 cut(s)	1122
EcoT14I	CCWWGG	1 cut(s)	367
EcoT38I	GRGCYC	3 cut(s)	142, 438, 1167
ErhI	CCWWGG	1 cut(s)	367
FaeI	CATG	5 cut(s)	545, 698, 929, 1163, 1526
FalI	AAGNNNNNCTT	4 cut(s)	727, 759, 975, 1007
FaqI	GGGAC	4 cut(s)	200, 339, 365, 545
FatI	CATG	5 cut(s)	541, 694, 925, 1159, 1522
Fnu4HI	GCNGC	8 cut(s)	96, 116, 295, 298, 492, 555, 678, 681
FokI	GGATG	5 cut(s)	581, 942, 1129, 1340, 1344
FriOI	GRGCYC	3 cut(s)	142, 438, 1167
Fsp4HI	GCNGC	8 cut(s)	96, 116, 295, 298, 492, 555, 678, 681
FspBI	CTAG	6 cut(s)	51, 360, 1095, 1115, 1175, 1311
GluI	GCNGC	8 cut(s)	96, 116, 295, 298, 492, 555, 678, 681
GsuI	CTGGAG	1 cut(s)	452
HaeIII	GGCC	2 cut(s)	596, 899
HapII	CCGG	4 cut(s)	331, 398, 413, 1477
Hin1I	GRCGYC	1 cut(s)	691
Hin1II	CATG	5 cut(s)	545, 698, 929, 1163, 1526
HindIII	AAGCTT	1 cut(s)	1153
HinfI	GANTC	4 cut(s)	23, 749, 1128, 1519
HpaII	CCGG	4 cut(s)	331, 398, 413, 1477
HphI	GGTGA	2 cut(s)	653, 1442
Hpy166II	GTNNAC	5 cut(s)	539, 587, 740, 1061, 1421
Hpy188III	TCNNGA	8 cut(s)	6, 431, 695, 753, 950, 1125, 1292, 1552
Hpy8I	GTNNAC	5 cut(s)	539, 587, 740, 1061, 1421
Hpy99I	CGWCG	1 cut(s)	1036
HpyAV	CCTTC	6 cut(s)	161, 264, 473, 753, 1409, 1489
HpyCH4III	ACNGT	5 cut(s)	128, 410, 837, 1250, 1390
HpyCH4IV	ACGT	4 cut(s)	426, 691, 1491, 1575
HpyF10VI	GCNNNNNNNGC	4 cut(s)	115, 210, 593, 677
HpyF3I	CTNAG	7 cut(s)	190, 326, 439, 446, 564, 1101, 1671
HpySE526I	ACGT	4 cut(s)	426, 691, 1491, 1575
Hsp92I	GRCGYC	1 cut(s)	691
Hsp92II	CATG	5 cut(s)	545, 698, 929, 1163, 1526
LguI	GCTCTTC	1 cut(s)	871
LmnI	GCTCC	5 cut(s)	243, 305, 433, 733, 1587
Lsp1109I	GCAGC	6 cut(s)	107, 281, 284, 503, 664, 667
LweI	GCATC	4 cut(s)	478, 688, 920, 1297
MaeI	CTAG	6 cut(s)	51, 360, 1095, 1115, 1175, 1311
MaeII	ACGT	4 cut(s)	426, 691, 1491, 1575
MaeIII	GTNAC	6 cut(s)	449, 1280, 1430, 1469, 1525, 1571
MbiI	CCGCTC	1 cut(s)	847
MboII	GAAGA	4 cut(s)	74, 356, 888, 1085
MflI	RGATCY	4 cut(s)	755, 814, 1187, 1376
MhlI	GDGCHC	6 cut(s)	142, 438, 589, 795, 1063, 1167
MluCI	AATT	8 cut(s)	46, 869, 908, 1039, 1138, 1261, 1504, 1555
MmeI	TCCRAC	7 cut(s)	39, 484, 491, 553, 745, 842, 1372
MseI	TTAA	7 cut(s)	456, 707, 1002, 1259, 1287, 1446, 1602
MslI	CAYNNNNRTG	1 cut(s)	940
MspA1I	CMGCKG	1 cut(s)	581
MspCI	CTTAAG	1 cut(s)	455
MspI	CCGG	4 cut(s)	331, 398, 413, 1477
MspR9I	CCNGG	3 cut(s)	666, 789, 1133
Mva1269I	GAATGC	1 cut(s)	1274
MvaI	CCWGG	3 cut(s)	666, 789, 1133
MwoI	GCNNNNNNNGC	4 cut(s)	115, 210, 593, 677
NheI	GCTAGC	1 cut(s)	1310
NlaIII	CATG	5 cut(s)	545, 698, 929, 1163, 1526
NlaIV	GGNNCC	6 cut(s)	245, 338, 381, 757, 816, 1635
NmuCI	GTSAC	3 cut(s)	1280, 1430, 1469
NspI	RCATGY	1 cut(s)	545
NspV	TTCGAA	1 cut(s)	867
PaeR7I	CTCGAG	2 cut(s)	6, 135
PagI	TCATGA	1 cut(s)	694
PciI	ACATGT	1 cut(s)	541
PciSI	GCTCTTC	1 cut(s)	871
PcsI	WCGNNNNNNNCGW	1 cut(s)	918
PctI	GAATGC	1 cut(s)	1274
PfeI	GAWTC	4 cut(s)	23, 749, 1128, 1519
PkrI	GCNGC	8 cut(s)	97, 117, 296, 299, 493, 556, 679, 682
Ple19I	CGATCG	2 cut(s)	535, 1454
PpuMI	RGGWCCY	1 cut(s)	379
PscI	ACATGT	1 cut(s)	541
PshBI	ATTAAT	1 cut(s)	1287
Psp124BI	GAGCTC	2 cut(s)	438, 1167
Psp5II	RGGWCCY	1 cut(s)	379
Psp6I	CCWGG	3 cut(s)	664, 787, 1131
PspGI	CCWGG	3 cut(s)	664, 787, 1131
PspN4I	GGNNCC	6 cut(s)	245, 338, 381, 757, 816, 1635
PspPI	GGNCC	4 cut(s)	379, 594, 740, 1394
PspPPI	RGGWCCY	1 cut(s)	379
PspXI	VCTCGAGB	1 cut(s)	135
PstNI	CAGNNNCTG	1 cut(s)	563
PsuI	RGATCY	4 cut(s)	755, 814, 1187, 1376
PvuI	CGATCG	2 cut(s)	535, 1454
PvuII	CAGCTG	1 cut(s)	581
RsaI	GTAC	6 cut(s)	133, 498, 839, 1247, 1578, 1599
RsaNI	GTAC	6 cut(s)	132, 497, 838, 1246, 1577, 1598
RseI	CAYNNNNRTG	1 cut(s)	940
SacI	GAGCTC	2 cut(s)	438, 1167
SapI	GCTCTTC	1 cut(s)	871
SaqAI	TTAA	7 cut(s)	456, 707, 1002, 1259, 1287, 1446, 1602
SatI	GCNGC	8 cut(s)	96, 116, 295, 298, 492, 555, 678, 681
Sau96I	GGNCC	4 cut(s)	379, 594, 740, 1394
ScaI	AGTACT	1 cut(s)	1247
ScrFI	CCNGG	3 cut(s)	666, 789, 1133
SduI	GDGCHC	6 cut(s)	142, 438, 589, 795, 1063, 1167
SfaNI	GCATC	4 cut(s)	478, 688, 920, 1297
SfcI	CTRYAG	2 cut(s)	90, 672
Sfr274I	CTCGAG	2 cut(s)	6, 135
SfuI	TTCGAA	1 cut(s)	867
SinI	GGWCC	3 cut(s)	379, 740, 1394
SlaI	CTCGAG	2 cut(s)	6, 135
SmiMI	CAYNNNNRTG	1 cut(s)	940
SmlI	CTYRAG	4 cut(s)	6, 135, 455, 853
SmoI	CTYRAG	4 cut(s)	6, 135, 455, 853
SpeI	ACTAGT	1 cut(s)	1114
Sse9I	AATT	8 cut(s)	46, 869, 908, 1039, 1138, 1261, 1504, 1555
SsiI	CCGC	5 cut(s)	116, 157, 169, 554, 847
SspMI	CTAG	6 cut(s)	51, 360, 1095, 1115, 1175, 1311
SstI	GAGCTC	2 cut(s)	438, 1167
StyD4I	CCNGG	3 cut(s)	664, 787, 1131
StyI	CCWWGG	1 cut(s)	367
TaaI	ACNGT	5 cut(s)	128, 410, 837, 1250, 1390
TaiI	ACGT	4 cut(s)	429, 694, 1494, 1578
TasI	AATT	8 cut(s)	46, 869, 908, 1039, 1138, 1261, 1504, 1555
TatI	WGTACW	3 cut(s)	837, 1245, 1597
TauI	GCSGC	2 cut(s)	118, 557
TfiI	GAWTC	4 cut(s)	23, 749, 1128, 1519
Tru1I	TTAA	7 cut(s)	456, 707, 1002, 1259, 1287, 1446, 1602
Tru9I	TTAA	7 cut(s)	456, 707, 1002, 1259, 1287, 1446, 1602
TscAI	CASTG	2 cut(s)	1285, 1478
TseFI	GTSAC	3 cut(s)	1280, 1430, 1469
TseI	GCWGC	6 cut(s)	95, 294, 297, 491, 677, 680
Tsp45I	GTSAC	3 cut(s)	1280, 1430, 1469
TspDTI	ATGAA	3 cut(s)	1131, 1320, 1532
TspGWI	ACGGA	2 cut(s)	877, 1350
TspRI	CASTG	2 cut(s)	1285, 1478
Vha464I	CTTAAG	1 cut(s)	455
VneI	GTGCAC	2 cut(s)	585, 1059
VpaK11BI	GGWCC	3 cut(s)	379, 740, 1394
VspI	ATTAAT	1 cut(s)	1287
XapI	RAATTY	7 cut(s)	46, 869, 908, 1039, 1261, 1504, 1555
XceI	RCATGY	1 cut(s)	545
XhoI	CTCGAG	2 cut(s)	6, 135
XspI	CTAG	6 cut(s)	51, 360, 1095, 1115, 1175, 1311
ZraI	GACGTC	1 cut(s)	692
ZrmI	AGTACT	1 cut(s)	1247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.