Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0006736

Physical Location & Seq

Genomic Coordinates Reverse (-)

17146462 .. 17151008

Gene Structure 4547 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g25390.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1386 bp

ATGAATTTCCAAGTGGTGGTCTTAGCCGGCGGGACATCCAAGAAACTCGTCCCTCTCGTCTCTAAGGAGCTTCCCAAAGCTCTCCTTCCGGTGGCGAACCGGCCGGTCATCTCCTACGTTCTCGAGCTCCTCGAGCTCAGCAACCTCAAGGATATCATTGTCGCGGTTGAAGGCAAAGAAGCGCATCATTGCGTGGAGCACTGGATTCTAGAGGCTTATATGGATCGATTACGTATCAAGGTTGAAAGAGTTCCTGATGATGTTGGAACAGCTGGTGTACTTCGGGCCGTTGCACACCTCCTGACTGCAAAAGACATTTTGGTTGTAAGTGGTGATATTGTCTCTGATGTTCCTCCTGGTGCGGTAGCGGCTGCTCATAGACGTCATGATGCAGTAGTAACAACGATGCTTTGCCCTGCTCCTGTAAGTGGACCTTCAGACTCTGGGTCCTCTATTGCAAAAGACAAAGCCAAGAAACCCGGGCATTACAATAGAATTGGGCTGGATCCCACAAAACAGTTTTTGCTGTACATCGCAACCGGAGCGGAACTTGAGAAAGATATGCGAATTCAGAAGAGTATACTTTGTGCGGTTGGTCAGATGGAAATTCGATCAGATCTCATGGATGCTCATTTATATGCATTCAAAAGGTCTGTTCTGCAGGAAGTTCTAAACCAAAAGGATAAATTTCAGAGTTTAAAGCAGGATGTATTACCTTACCTTGTTCGTACACAGCTGAGTTCGGAGGTGGTGTTAAATGGCGTACAACAACCAGAAGAAAATGGAAATGAAAAGGCTAGTTACCAAAACAACCAAGAATTGCTATCTCAAGTCTTGTCTAATTCATCCACTGCAAGTTTCCATGAGCTCTATGCATTAGGTCCTAAAGGCTCCATTCCTGTTCGAAGAACCCATAAATGCTGTGTTTATATTGCCAGCAACAGCAAGTACTGTATGCGGTTGGATTCCATTCAGGCATTCAGCGACATTAATCGAGATGTTATAGGAGATGCTAGTCATCTGTCTGGGTATTCCTTCTCTGCCCACAATAACATCATCCACCCGTCAGCAGAGCTTGGATCAAAAACAACTGTTGGACCACATTGTATGTTGGGTGAAGCTTCAATTATGGGCGACAAATGTAGTGTTAAACGGTCTGTAATTGGCCGTCACTGCCGGATAGGTTCTAATGTGAAGGTTGTAAATTCTGTTGTTATGAATCATGTTACTATTGCCGATGGTTGTACAATCCAAAATTCAGTTATTTGCAGCAATGTACAGCTCCAAGAACGTGTTGTACTGAAAGATTGTCAGGTTGGTGCAAATTTTGTTGTTACCACTGGGAGTGAGTGCAAAGGGGAGGCGTTGGCCAAGAAAGAAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002253 GO:0002376 GO:0002429 GO:0002682 GO:0002684 GO:0002757 GO:0002764 GO:0002768 GO:0003674 GO:0005085 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005851 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007275 GO:0007399 GO:0007417 GO:0007420 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009408 GO:0009628 GO:0009719 GO:0009725 GO:0009743 GO:0009746 GO:0009749 GO:0009987 GO:0010001 GO:0010033 GO:0010243 GO:0010467 GO:0014003 GO:0019538 GO:0019899 GO:0021537 GO:0021543 GO:0021761 GO:0021766 GO:0021782 GO:0022008 GO:0023052 GO:0030154 GO:0030900 GO:0032501 GO:0032502 GO:0032991 GO:0034284 GO:0034641 GO:0034645 GO:0042063 GO:0042221 GO:0043043 GO:0043170 GO:0043434 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0048468 GO:0048513 GO:0048518 GO:0048583 GO:0048584 GO:0048709 GO:0048731 GO:0048856 GO:0048869 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050851 GO:0050852 GO:0050896 GO:0051020 GO:0051716 GO:0060322 GO:0065007 GO:0065009 GO:0071704 GO:0098772 GO:1901564 GO:1901566 GO:1901576 GO:1901652 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Hexapep NTP_transf_3 NTP_transferase

Protein Analysis

462

Amino Acids

50.14

Weight (kDa)

8.46

Isoelectric Point (pI)

34.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NTP_transferase	PF00483	5 - 244	2.8e-16	Nucleotidyl transferase
NTP_transf_3	PF12804	5 - 128	4.1e-11	MobA-like NTP transferase domain
GMPPB_C	PF25087	350 - 442	1.7e-12	GMPPB C-terminal domain
LbH_EIF2B	PF25084	354 - 447	5.3e-21	EIF2B subunit epsilon LbH domain
Hexapep_GlmU	PF24894	380 - 433	7.2e-07	GlmU-like, C-terminal hexapeptide

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006736)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19485
fragaria_vesca	FvH4_1g25390
malus_domestica	MD03G1163000.v1.1
prunus_persica	Prupe.4G269500_v2.0.a1 Prupe.4G269500_v2.0.a1 Prupe.4G269500_v2.0.a1 Prupe.4G269500_v2.0.a1 Prupe.4G269500_v2.0.a1 Prupe.4G269500_v2.0.a1
pyrus_communis	pycom12561g00150 pycom5153684g00170
rosa_chinensis	RchiOBHm_Chr2g0123421
rosa_laevigata	RLG00000018753 RLG00000036275
rosa_multiflora	Rmu_sc0018866.1_g000001
rosa_roxburghii	Rroxscaffold_2G00093620 Rroxscaffold_2G00120680 Rroxscaffold_5G00351380
rosa_rugosa	Rorug02G0245500 Rorug02G0245500
rosa_samantha	Rh2AG304300 Rh2BG312300 Rh2CG290800 Rh2DG328300 Rh5AG454400
rosa_wichuraiana	Rw2G024360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	385
AccB7I	CCANNNNNTGG	1 cut(s)	16
AccBSI	CCGCTC	1 cut(s)	545
AccI	GTMKAC	1 cut(s)	580
AccII	CGCG	1 cut(s)	164
AciI	CCGC	7 cut(s)	30, 164, 362, 368, 545, 590, 958
AclWI	GGATC	4 cut(s)	231, 500, 513, 1087
AcoI	YGGCCR	3 cut(s)	101, 1165, 1368
AcsI	RAATTY	7 cut(s)	4, 567, 606, 686, 1204, 1255, 1324
AcuI	CTGAAG	1 cut(s)	420
AcyI	GRCGYC	1 cut(s)	382
AfaI	GTAC	8 cut(s)	279, 530, 730, 765, 950, 1246, 1278, 1299
AfiI	CCNNNNNNNGG	3 cut(s)	16, 91, 428
AflIII	ACRYGT	1 cut(s)	1291
AgsI	TTSAA	4 cut(s)	170, 245, 646, 1125
AhdI	GACNNNNNGTC	1 cut(s)	445
AjnI	CCWGG	1 cut(s)	355
Alw21I	GWGCWC	4 cut(s)	129, 138, 201, 870
Alw26I	GTCTC	2 cut(s)	64, 346
AlwI	GGATC	4 cut(s)	231, 500, 513, 1087
AlwNI	CAGNNNCTG	1 cut(s)	443
Ama87I	CYCGRG	3 cut(s)	122, 131, 479
AoxI	GGCC	4 cut(s)	101, 285, 1165, 1368
ApeKI	GCWGC	2 cut(s)	371, 1269
ApoI	RAATTY	7 cut(s)	4, 567, 606, 686, 1204, 1255, 1324
AseI	ATTAAT	1 cut(s)	990
Asp700I	GAANNNNTTC	1 cut(s)	249
AspLEI	GCGC	1 cut(s)	184
AspS9I	GGNCC	5 cut(s)	285, 431, 447, 881, 1097
AsuC2I	CCSGG	2 cut(s)	480, 481
AsuHPI	GGTGA	2 cut(s)	344, 1127
AsuII	TTCGAA	1 cut(s)	904
AvaI	CYCGRG	3 cut(s)	122, 131, 479
AvaII	GGWCC	4 cut(s)	431, 447, 881, 1097
BalI	TGGCCA	1 cut(s)	1370
BamHI	GGATCC	1 cut(s)	505
BanII	GRGCYC	3 cut(s)	129, 138, 870
Bbv12I	GWGCWC	4 cut(s)	129, 138, 201, 870
BbvI	GCAGC	2 cut(s)	358, 1281
BccI	CCATC	2 cut(s)	595, 1232
BceAI	ACGGC	2 cut(s)	272, 1152
BciT130I	CCWGG	1 cut(s)	357
BcnI	CCSGG	2 cut(s)	480, 481
BcoDI	GTCTC	2 cut(s)	64, 346
BfaI	CTAG	3 cut(s)	209, 798, 1014
BfmI	CTRYAG	1 cut(s)	659
BglII	AGATCT	1 cut(s)	616
BisI	GCNGC	3 cut(s)	369, 372, 1270
BlpI	GCTNAGC	1 cut(s)	137
BlsI	GCNGC	3 cut(s)	370, 373, 1271
BmcAI	AGTACT	1 cut(s)	950
Bme1390I	CCNGG	3 cut(s)	357, 480, 481
Bme18I	GGWCC	4 cut(s)	431, 447, 881, 1097
BmeRI	GACNNNNNGTC	1 cut(s)	445
BmeT110I	CYCGRG	3 cut(s)	122, 131, 479
BmgT120I	GGNCC	5 cut(s)	285, 431, 447, 881, 1097
BmiI	GGNNCC	3 cut(s)	448, 507, 892
BmrFI	CCNGG	3 cut(s)	357, 480, 481
BmrI	ACTGGG	1 cut(s)	1350
BmsI	GCATC	5 cut(s)	193, 379, 396, 616, 1000
BmuI	ACTGGG	1 cut(s)	1350
Bpu1102I	GCTNAGC	1 cut(s)	137
Bpu14I	TTCGAA	1 cut(s)	904
BpuEI	CTTGAG	3 cut(s)	131, 572, 813
BpuMI	CCSGG	2 cut(s)	480, 481
Bsa29I	ATCGAT	1 cut(s)	226
BsaAI	YACGTR	1 cut(s)	233
BsaHI	GRCGYC	1 cut(s)	382
BsaJI	CCNNGG	1 cut(s)	479
BsaWI	WCCGGW	2 cut(s)	88, 539
BsaXI	ACNNNNNCTCC	2 cut(s)	737, 767
Bsc4I	CCNNNNNNNGG	3 cut(s)	16, 91, 428
Bse118I	RCCGGY	3 cut(s)	26, 99, 103
Bse1I	ACTGG	2 cut(s)	206, 1345
Bse3DI	GCAATG	2 cut(s)	187, 1279
BseBI	CCWGG	1 cut(s)	357
BseCI	ATCGAT	1 cut(s)	226
BseDI	CCNNGG	1 cut(s)	479
BseGI	GGATG	5 cut(s)	35, 631, 712, 845, 1056
BseLI	CCNNNNNNNGG	3 cut(s)	16, 91, 428
BseMI	GCAATG	2 cut(s)	187, 1279
BseMII	CTCAG	2 cut(s)	151, 728
BseNI	ACTGG	2 cut(s)	206, 1345
BseRI	GAGGAG	1 cut(s)	119
BseX3I	CGGCCG	1 cut(s)	101
BseXI	GCAGC	2 cut(s)	358, 1281
Bsh1236I	CGCG	1 cut(s)	164
Bsh1285I	CGRYCG	1 cut(s)	104
BshFI	GGCC	4 cut(s)	103, 287, 1167, 1370
BshVI	ATCGAT	1 cut(s)	226
BsiEI	CGRYCG	1 cut(s)	104
BsiHKAI	GWGCWC	4 cut(s)	129, 138, 201, 870
BsiHKCI	CYCGRG	3 cut(s)	122, 131, 479
BsiSI	CCGG	7 cut(s)	27, 89, 100, 104, 480, 540, 1177
BslFI	GGGAC	2 cut(s)	35, 46
BslI	CCNNNNNNNGG	3 cut(s)	16, 91, 428
BsmAI	GTCTC	2 cut(s)	64, 346
BsmBI	CGTCTC	1 cut(s)	64
BsmFI	GGGAC	2 cut(s)	35, 46
BsmI	GAATGC	2 cut(s)	641, 977
BsnI	GGCC	4 cut(s)	103, 287, 1167, 1370
BsoBI	CYCGRG	3 cut(s)	122, 131, 479
Bsp119I	TTCGAA	1 cut(s)	904
Bsp1286I	GDGCHC	4 cut(s)	129, 138, 201, 870
Bsp1407I	TGTACA	3 cut(s)	528, 1244, 1276
Bsp143I	GATC	5 cut(s)	223, 505, 611, 616, 1079
Bsp1720I	GCTNAGC	1 cut(s)	137
BspACI	CCGC	7 cut(s)	30, 164, 362, 368, 545, 590, 958
BspANI	GGCC	4 cut(s)	103, 287, 1167, 1370
BspCNI	CTCAG	2 cut(s)	150, 729
BspDI	ATCGAT	1 cut(s)	226
BspFNI	CGCG	1 cut(s)	164
BspHI	TCATGA	1 cut(s)	385
BspLI	GGNNCC	3 cut(s)	448, 507, 892
BspMAI	CTGCAG	1 cut(s)	663
BspPI	GGATC	4 cut(s)	231, 500, 513, 1087
BspT104I	TTCGAA	1 cut(s)	904
BsrBI	CCGCTC	1 cut(s)	545
BsrDI	GCAATG	2 cut(s)	187, 1279
BsrFI	RCCGGY	3 cut(s)	26, 99, 103
BsrGI	TGTACA	3 cut(s)	528, 1244, 1276
BsrI	ACTGG	2 cut(s)	206, 1345
BssAI	RCCGGY	3 cut(s)	26, 99, 103
BssECI	CCNNGG	1 cut(s)	479
BssMI	GATC	5 cut(s)	223, 505, 611, 616, 1079
BssNAI	GTATAC	1 cut(s)	581
BssNI	GRCGYC	1 cut(s)	382
Bst1107I	GTATAC	1 cut(s)	581
Bst2UI	CCWGG	1 cut(s)	357
Bst4CI	ACNGT	4 cut(s)	519, 953, 1093, 1155
Bst6I	CTCTTC	1 cut(s)	569
BstACI	GRCGYC	1 cut(s)	382
BstAUI	TGTACA	3 cut(s)	528, 1244, 1276
BstBAI	YACGTR	1 cut(s)	233
BstBI	TTCGAA	1 cut(s)	904
BstC8I	GCNNGC	2 cut(s)	28, 937
BstDEI	CTNAG	4 cut(s)	22, 63, 137, 737
BstF5I	GGATG	5 cut(s)	35, 631, 712, 845, 1056
BstFNI	CGCG	1 cut(s)	164
BstHHI	GCGC	1 cut(s)	184
BstKTI	GATC	5 cut(s)	226, 508, 614, 619, 1082
BstMAI	GTCTC	2 cut(s)	64, 346
BstMBI	GATC	5 cut(s)	223, 505, 611, 616, 1079
BstMCI	CGRYCG	1 cut(s)	104
BstMWI	GCNNNNNNNGC	4 cut(s)	133, 368, 542, 1173
BstNI	CCWGG	1 cut(s)	357
BstSCI	CCNGG	3 cut(s)	355, 478, 479
BstSFI	CTRYAG	1 cut(s)	659
BstSNI	TACGTA	1 cut(s)	233
BstUI	CGCG	1 cut(s)	164
BstV1I	GCAGC	2 cut(s)	358, 1281
BstX2I	RGATCY	2 cut(s)	505, 616
BstYI	RGATCY	2 cut(s)	505, 616
BstZ17I	GTATAC	1 cut(s)	581
BstZI	CGGCCG	1 cut(s)	101
Bsu15I	ATCGAT	1 cut(s)	226
BsuRI	GGCC	4 cut(s)	103, 287, 1167, 1370
BsuTUI	ATCGAT	1 cut(s)	226
BtgZI	GCGATG	1 cut(s)	517
BtsCI	GGATG	5 cut(s)	35, 631, 712, 845, 1056
BtsI	GCAGTG	2 cut(s)	849, 1171
BtsIMutI	CAGTG	4 cut(s)	199, 849, 1171, 1338
Cac8I	GCNNGC	2 cut(s)	28, 937
CaiI	CAGNNNCTG	1 cut(s)	443
CciI	TCATGA	1 cut(s)	385
CfoI	GCGC	1 cut(s)	184
Cfr10I	RCCGGY	3 cut(s)	26, 99, 103
Cfr13I	GGNCC	5 cut(s)	285, 431, 447, 881, 1097
Cfr9I	CCCGGG	1 cut(s)	479
ClaI	ATCGAT	1 cut(s)	226
Csp6I	GTAC	8 cut(s)	278, 529, 729, 764, 949, 1245, 1277, 1298
CviAII	CATG	4 cut(s)	386, 622, 863, 1223
CviQI	GTAC	8 cut(s)	278, 529, 729, 764, 949, 1245, 1277, 1298
DdeI	CTNAG	4 cut(s)	22, 63, 137, 737
DpnI	GATC	5 cut(s)	225, 507, 613, 618, 1081
DpnII	GATC	5 cut(s)	223, 505, 611, 616, 1079
DraI	TTTAAA	1 cut(s)	699
DriI	GACNNNNNGTC	1 cut(s)	445
EaeI	YGGCCR	3 cut(s)	101, 1165, 1368
EagI	CGGCCG	1 cut(s)	101
Eam1104I	CTCTTC	1 cut(s)	569
Eam1105I	GACNNNNNGTC	1 cut(s)	445
EarI	CTCTTC	1 cut(s)	569
Ecl136II	GAGCTC	3 cut(s)	127, 136, 868
EclXI	CGGCCG	1 cut(s)	101
Eco105I	TACGTA	1 cut(s)	233
Eco24I	GRGCYC	3 cut(s)	129, 138, 870
Eco32I	GATATC	1 cut(s)	154
Eco47I	GGWCC	4 cut(s)	431, 447, 881, 1097
Eco52I	CGGCCG	1 cut(s)	101
Eco53kI	GAGCTC	3 cut(s)	127, 136, 868
Eco57I	CTGAAG	1 cut(s)	420
Eco88I	CYCGRG	3 cut(s)	122, 131, 479
EcoICRI	GAGCTC	3 cut(s)	127, 136, 868
EcoO109I	RGGNCCY	2 cut(s)	447, 881
EcoRI	GAATTC	1 cut(s)	567
EcoRII	CCWGG	1 cut(s)	355
EcoRV	GATATC	1 cut(s)	154
EcoT22I	ATGCAT	2 cut(s)	643, 877
EcoT38I	GRGCYC	3 cut(s)	129, 138, 870
Esp3I	CGTCTC	1 cut(s)	64
FaeI	CATG	4 cut(s)	389, 625, 866, 1226
FalI	AAGNNNNNCTT	4 cut(s)	69, 101, 418, 450
FaqI	GGGAC	2 cut(s)	35, 46
FatI	CATG	4 cut(s)	385, 621, 862, 1222
FauI	CCCGC	1 cut(s)	23
FblI	GTMKAC	1 cut(s)	580
Fnu4HI	GCNGC	3 cut(s)	369, 372, 1270
FokI	GGATG	5 cut(s)	22, 638, 719, 832, 1043
FriOI	GRGCYC	3 cut(s)	129, 138, 870
Fsp4HI	GCNGC	3 cut(s)	369, 372, 1270
FspBI	CTAG	3 cut(s)	209, 798, 1014
GlaI	GCGC	1 cut(s)	183
GluI	GCNGC	3 cut(s)	369, 372, 1270
HaeIII	GGCC	4 cut(s)	103, 287, 1167, 1370
HapII	CCGG	7 cut(s)	27, 89, 100, 104, 480, 540, 1177
HhaI	GCGC	1 cut(s)	184
Hin1I	GRCGYC	1 cut(s)	382
Hin1II	CATG	4 cut(s)	389, 625, 866, 1226
Hin6I	GCGC	1 cut(s)	182
HinP1I	GCGC	1 cut(s)	182
HindIII	AAGCTT	1 cut(s)	1119
HinfI	GANTC	4 cut(s)	205, 440, 965, 1219
HpaII	CCGG	7 cut(s)	27, 89, 100, 104, 480, 540, 1177
HphI	GGTGA	2 cut(s)	344, 1127
Hpy166II	GTNNAC	4 cut(s)	278, 431, 581, 731
Hpy188I	TCNGA	7 cut(s)	346, 439, 573, 600, 616, 693, 745
Hpy188III	TCNNGA	6 cut(s)	122, 209, 254, 301, 386, 995
Hpy8I	GTNNAC	4 cut(s)	278, 431, 581, 731
HpyAV	CCTTC	5 cut(s)	95, 164, 444, 1045, 1189
HpyCH4III	ACNGT	4 cut(s)	519, 953, 1093, 1155
HpyCH4IV	ACGT	4 cut(s)	117, 232, 382, 1291
HpyF10VI	GCNNNNNNNGC	4 cut(s)	133, 368, 542, 1173
HpyF3I	CTNAG	4 cut(s)	22, 63, 137, 737
HpySE526I	ACGT	4 cut(s)	117, 232, 382, 1291
Hsp92I	GRCGYC	1 cut(s)	382
Hsp92II	CATG	4 cut(s)	389, 625, 866, 1226
HspAI	GCGC	1 cut(s)	182
KroI	GCCGGC	1 cut(s)	26
KroNI	GCCGGC	1 cut(s)	28
Kzo9I	GATC	5 cut(s)	223, 505, 611, 616, 1079
LmnI	GCTCC	7 cut(s)	67, 132, 196, 424, 542, 896, 1287
Lsp1109I	GCAGC	2 cut(s)	358, 1281
LweI	GCATC	5 cut(s)	193, 379, 396, 616, 1000
MaeI	CTAG	3 cut(s)	209, 798, 1014
MaeII	ACGT	4 cut(s)	117, 232, 382, 1291
MaeIII	GTNAC	5 cut(s)	397, 800, 1169, 1225, 1333
MalI	GATC	5 cut(s)	225, 507, 613, 618, 1081
MbiI	CCGCTC	1 cut(s)	545
MboI	GATC	5 cut(s)	223, 505, 611, 616, 1079
MboII	GAAGA	3 cut(s)	586, 788, 918
MflI	RGATCY	2 cut(s)	505, 616
MhlI	GDGCHC	4 cut(s)	129, 138, 201, 870
MlsI	TGGCCA	1 cut(s)	1370
MluNI	TGGCCA	1 cut(s)	1370
MlyI	GAGTC	1 cut(s)	434
MmeI	TCCRAC	3 cut(s)	244, 942, 1075
MnlI	CCTC	9 cut(s)	63, 140, 155, 205, 308, 363, 460, 739, 1354
Mox20I	TGGCCA	1 cut(s)	1370
Mph1103I	ATGCAT	2 cut(s)	643, 877
MroNI	GCCGGC	1 cut(s)	26
MroXI	GAANNNNTTC	1 cut(s)	249
MscI	TGGCCA	1 cut(s)	1370
MseI	TTAA	4 cut(s)	698, 755, 990, 1149
MslI	CAYNNNNRTG	1 cut(s)	636
Msp20I	TGGCCA	1 cut(s)	1370
MspA1I	CMGCKG	2 cut(s)	272, 736
MspI	CCGG	7 cut(s)	27, 89, 100, 104, 480, 540, 1177
MspR9I	CCNGG	3 cut(s)	357, 480, 481
Mva1269I	GAATGC	2 cut(s)	641, 977
MvaI	CCWGG	1 cut(s)	357
MvnI	CGCG	1 cut(s)	164
MwoI	GCNNNNNNNGC	4 cut(s)	133, 368, 542, 1173
NaeI	GCCGGC	1 cut(s)	28
NciI	CCSGG	2 cut(s)	480, 481
NdeII	GATC	5 cut(s)	223, 505, 611, 616, 1079
NgoMIV	GCCGGC	1 cut(s)	26
NlaIII	CATG	4 cut(s)	389, 625, 866, 1226
NlaIV	GGNNCC	3 cut(s)	448, 507, 892
NmuCI	GTSAC	1 cut(s)	1169
NsiI	ATGCAT	2 cut(s)	643, 877
NspV	TTCGAA	1 cut(s)	904
PaeR7I	CTCGAG	2 cut(s)	122, 131
PagI	TCATGA	1 cut(s)	385
PcsI	WCGNNNNNNNCGW	2 cut(s)	54, 129
PctI	GAATGC	2 cut(s)	641, 977
PdiI	GCCGGC	1 cut(s)	28
PdmI	GAANNNNTTC	1 cut(s)	249
PfeI	GAWTC	3 cut(s)	205, 965, 1219
PflMI	CCANNNNNTGG	1 cut(s)	16
PkrI	GCNGC	3 cut(s)	370, 373, 1271
PleI	GAGTC	1 cut(s)	434
PpsI	GAGTC	1 cut(s)	434
Ppu21I	YACGTR	1 cut(s)	233
PpuMI	RGGWCCY	2 cut(s)	447, 881
PshBI	ATTAAT	1 cut(s)	990
Psp124BI	GAGCTC	3 cut(s)	129, 138, 870
Psp5II	RGGWCCY	2 cut(s)	447, 881
Psp6I	CCWGG	1 cut(s)	355
PspGI	CCWGG	1 cut(s)	355
PspN4I	GGNNCC	3 cut(s)	448, 507, 892
PspPI	GGNCC	5 cut(s)	285, 431, 447, 881, 1097
PspPPI	RGGWCCY	2 cut(s)	447, 881
PspXI	VCTCGAGB	1 cut(s)	131
PsrI	GAACNNNNNNTAC	2 cut(s)	1281, 1313
PstI	CTGCAG	1 cut(s)	663
PstNI	CAGNNNCTG	1 cut(s)	443
PsuI	RGATCY	2 cut(s)	505, 616
PvuII	CAGCTG	2 cut(s)	272, 736
RsaI	GTAC	8 cut(s)	279, 530, 730, 765, 950, 1246, 1278, 1299
RsaNI	GTAC	8 cut(s)	278, 529, 729, 764, 949, 1245, 1277, 1298
RseI	CAYNNNNRTG	1 cut(s)	636
SacI	GAGCTC	3 cut(s)	129, 138, 870
SaqAI	TTAA	4 cut(s)	698, 755, 990, 1149
SatI	GCNGC	3 cut(s)	369, 372, 1270
Sau3AI	GATC	5 cut(s)	223, 505, 611, 616, 1079
Sau96I	GGNCC	5 cut(s)	285, 431, 447, 881, 1097
ScaI	AGTACT	1 cut(s)	950
SchI	GAGTC	1 cut(s)	434
ScrFI	CCNGG	3 cut(s)	357, 480, 481
SduI	GDGCHC	4 cut(s)	129, 138, 201, 870
SfaNI	GCATC	5 cut(s)	193, 379, 396, 616, 1000
SfcI	CTRYAG	1 cut(s)	659
Sfr274I	CTCGAG	2 cut(s)	122, 131
SfuI	TTCGAA	1 cut(s)	904
SinI	GGWCC	4 cut(s)	431, 447, 881, 1097
SlaI	CTCGAG	2 cut(s)	122, 131
SmaI	CCCGGG	1 cut(s)	481
SmiMI	CAYNNNNRTG	1 cut(s)	636
SmlI	CTYRAG	5 cut(s)	122, 131, 146, 551, 828
SmoI	CTYRAG	5 cut(s)	122, 131, 146, 551, 828
SnaBI	TACGTA	1 cut(s)	233
SsiI	CCGC	7 cut(s)	30, 164, 362, 368, 545, 590, 958
SspMI	CTAG	3 cut(s)	209, 798, 1014
SstI	GAGCTC	3 cut(s)	129, 138, 870
StyD4I	CCNGG	3 cut(s)	355, 478, 479
TaaI	ACNGT	4 cut(s)	519, 953, 1093, 1155
TaiI	ACGT	4 cut(s)	120, 235, 385, 1294
TaqI	TCGA	6 cut(s)	123, 132, 226, 610, 904, 994
TatI	WGTACW	6 cut(s)	277, 528, 948, 1244, 1276, 1297
TauI	GCSGC	1 cut(s)	371
TfiI	GAWTC	3 cut(s)	205, 965, 1219
Tru1I	TTAA	4 cut(s)	698, 755, 990, 1149
Tru9I	TTAA	4 cut(s)	698, 755, 990, 1149
TscAI	CASTG	4 cut(s)	206, 856, 1178, 1345
TseFI	GTSAC	1 cut(s)	1169
TseI	GCWGC	2 cut(s)	371, 1269
Tsp45I	GTSAC	1 cut(s)	1169
TspDTI	ATGAA	4 cut(s)	17, 804, 834, 1232
TspMI	CCCGGG	1 cut(s)	479
TspRI	CASTG	4 cut(s)	206, 856, 1178, 1345
Van91I	CCANNNNNTGG	1 cut(s)	16
VpaK11BI	GGWCC	4 cut(s)	431, 447, 881, 1097
VspI	ATTAAT	1 cut(s)	990
XapI	RAATTY	7 cut(s)	4, 567, 606, 686, 1204, 1255, 1324
XbaI	TCTAGA	1 cut(s)	208
XhoI	CTCGAG	2 cut(s)	122, 131
XmaI	CCCGGG	1 cut(s)	479
XmiI	GTMKAC	1 cut(s)	580
XmnI	GAANNNNTTC	1 cut(s)	249
XspI	CTAG	3 cut(s)	209, 798, 1014
ZraI	GACGTC	1 cut(s)	383
ZrmI	AGTACT	1 cut(s)	950
Zsp2I	ATGCAT	2 cut(s)	643, 877

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.