Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0006736

Physical Location & Seq

Genomic Coordinates Reverse (-)

35987853 .. 35993277

Gene Structure 5425 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G024360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1386 bp

ATGGATTTCCAAGTGGTGGTCTTAGCCGGCGGAACATCCAAGAAACTCGTCCCTCTCGTCTCCAAGGAGGTTCCGAAAGCTCTGCTTCCGGTGGCGAACCGCCCGGTTATCTCGTACGTTCTGGAGCTCTTAGAACTCAGTAACCTTAAGGATATCATTGTTGCGGTTGAAGGAAAAGAAGCGTATGATTGCGTTGAGCACTGGATTGTAGAAGCTTATATCGATCGATTACGTATCCAGGTTGAAAGAGTCCCTGATGATGTTGGAACAGCTGGTGCTCTTCGGGCCGTCGCACACCTCCTGACTGCAAAAGACATTTTGGTTGTCAGTGGTGATATTGTCTCCGATGTTTCTCCTGGTGCAGTAGCTGCTGCTCATAGACGTCATGATGCAGTAGTAACAACAATGCTTTGCTCTGCTCCTGTAAGTGGACCTTCAGATTCTGGGTCCTCTGTTACAAAAGACAAAGCCAAGAAACCCGGACATTACAATAGAATTGGGCTGGATCCCACAAAACAGTTTTTGCTGTACATCGCAACGGGAGCGGAACTTGAGAAAGATATGCGAATTCAGAAGAATATACTTTGTGCGGTTGGTCAGATGGAAATTCGATCTGATCTCATGGATGCTCATTTATATGCATTCAAAAGGTCTGTTCTGCAAGAAGTTCTAAACCAAAAGGATAAATTTCAAAGTTTAAAGCAGGATGTATTACCTTACCTTGTTCGTACACAGCTGGCTTCAGAGGTGGTGTTAAATGGTGTACCACAACCAGAAGAAAATGGAAATGAAAAGGCTAGTTACCAAAACAACCAAGAAATGCTATCCCAAATCCTGGCTAATTCATCCACTTCAAGTTTCCATGAGCTCCATGCATTGGGTCCTAAATGCTCACTTCCTGTTCGAAGAACCCATAAATGCTGTGTTTATATTGCCAGCAACAGCAAGTACTGTATGCGGTTGAATTCCATTCAGGCATTCAATGACATTAATCGAGATGTTATAGGAGATGCTAGCCATCTGTCTGGGTATTCATTCTCTGCCCACAATAACATCATCCATCCATCAGCAGAACTTGGATCAAAAACAACAGTTGGACCACATTGTATGCTGGGGGAAGCTTCAATTATGGGCGACAAATGTAGTGTTAAACGGTCTGTTATTGGCCGTCACTGCCGGATAGGTTCTAATGTTAAGGTTGTAAATTCAGTTGTTATGAATCATGTTACTATTGCCGATGGTTGTACAATCCAAAATTCAGTAGTTTGCAGCAATGTGCAGCTCCAAGATCGTGTTGTACTGAAAGATTGTCAAGTTGGTGCAAATTTTGTTGTTACTACCGGCAGTGAGTGCAAAGGGGAGGCATTGGCTAAGAAAGAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002253 GO:0002376 GO:0002429 GO:0002682 GO:0002684 GO:0002757 GO:0002764 GO:0002768 GO:0003674 GO:0005085 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005851 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007275 GO:0007399 GO:0007417 GO:0007420 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009266 GO:0009408 GO:0009628 GO:0009719 GO:0009725 GO:0009743 GO:0009746 GO:0009749 GO:0009987 GO:0010001 GO:0010033 GO:0010243 GO:0010467 GO:0014003 GO:0019538 GO:0019899 GO:0021537 GO:0021543 GO:0021761 GO:0021766 GO:0021782 GO:0022008 GO:0023052 GO:0030154 GO:0030900 GO:0032501 GO:0032502 GO:0032991 GO:0034284 GO:0034641 GO:0034645 GO:0042063 GO:0042221 GO:0043043 GO:0043170 GO:0043434 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0048468 GO:0048513 GO:0048518 GO:0048583 GO:0048584 GO:0048709 GO:0048731 GO:0048856 GO:0048869 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050851 GO:0050852 GO:0050896 GO:0051020 GO:0051716 GO:0060322 GO:0065007 GO:0065009 GO:0071704 GO:0098772 GO:1901564 GO:1901566 GO:1901576 GO:1901652 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Hexapep NTP_transf_3 NTP_transferase

Protein Analysis

461

Amino Acids

50.09

Weight (kDa)

8.12

Isoelectric Point (pI)

34.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NTP_transferase	PF00483	5 - 247	8.4e-17	Nucleotidyl transferase
NTP_transf_3	PF12804	5 - 124	9.3e-11	MobA-like NTP transferase domain
GMPPB_C	PF25087	350 - 445	4.8e-13	GMPPB C-terminal domain
LbH_EIF2B	PF25084	354 - 447	6.4e-21	EIF2B subunit epsilon LbH domain
Hexapep_GlmU	PF24894	380 - 433	1.5e-06	GlmU-like, C-terminal hexapeptide

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006736)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19485
fragaria_vesca	FvH4_1g25390
malus_domestica	MD03G1163000.v1.1
prunus_persica	Prupe.4G269500_v2.0.a1 Prupe.4G269500_v2.0.a1 Prupe.4G269500_v2.0.a1 Prupe.4G269500_v2.0.a1 Prupe.4G269500_v2.0.a1 Prupe.4G269500_v2.0.a1
pyrus_communis	pycom12561g00150 pycom5153684g00170
rosa_chinensis	RchiOBHm_Chr2g0123421
rosa_laevigata	RLG00000018753 RLG00000036275
rosa_multiflora	Rmu_sc0018866.1_g000001
rosa_roxburghii	Rroxscaffold_2G00093620 Rroxscaffold_2G00120680 Rroxscaffold_5G00351380
rosa_rugosa	Rorug02G0245500 Rorug02G0245500
rosa_samantha	Rh2AG304300 Rh2BG312300 Rh2CG290800 Rh2DG328300 Rh5AG454400
rosa_wichuraiana	Rw2G024360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	385
AccB7I	CCANNNNNTGG	3 cut(s)	16, 835, 877
AccBSI	CCGCTC	1 cut(s)	545
AciI	CCGC	6 cut(s)	30, 100, 164, 545, 590, 958
AclWI	GGATC	3 cut(s)	500, 513, 1087
AcoI	YGGCCR	1 cut(s)	1165
AcsI	RAATTY	7 cut(s)	567, 606, 686, 964, 1204, 1255, 1324
AcuI	CTGAAG	2 cut(s)	420, 726
AcyI	GRCGYC	1 cut(s)	382
AfaI	GTAC	7 cut(s)	116, 530, 730, 765, 950, 1246, 1299
AfiI	CCNNNNNNNGG	4 cut(s)	16, 428, 835, 877
AflII	CTTAAG	1 cut(s)	146
AgsI	TTSAA	8 cut(s)	170, 245, 646, 692, 855, 964, 982, 1125
AjnI	CCWGG	3 cut(s)	237, 355, 834
AluBI	AGCT	9 cut(s)	80, 127, 215, 272, 368, 736, 868, 1121, 1282
AluI	AGCT	9 cut(s)	80, 127, 215, 272, 368, 736, 868, 1121, 1282
Alw21I	GWGCWC	4 cut(s)	129, 201, 280, 870
Alw26I	GTCTC	2 cut(s)	64, 346
AlwI	GGATC	3 cut(s)	500, 513, 1087
AlwNI	CAGNNNCTG	2 cut(s)	368, 443
AoxI	GGCC	2 cut(s)	285, 1165
ApeKI	GCWGC	4 cut(s)	368, 371, 1269, 1279
ApoI	RAATTY	7 cut(s)	567, 606, 686, 964, 1204, 1255, 1324
AseI	ATTAAT	1 cut(s)	990
AspS9I	GGNCC	5 cut(s)	285, 431, 447, 881, 1097
AsuC2I	CCSGG	2 cut(s)	104, 480
AsuHPI	GGTGA	1 cut(s)	344
AsuII	TTCGAA	1 cut(s)	904
AsuNHI	GCTAGC	1 cut(s)	1013
AvaII	GGWCC	4 cut(s)	431, 447, 881, 1097
BamHI	GGATCC	1 cut(s)	505
BanII	GRGCYC	2 cut(s)	129, 870
Bbv12I	GWGCWC	4 cut(s)	129, 201, 280, 870
BbvI	GCAGC	4 cut(s)	355, 358, 1281, 1291
BccI	CCATC	5 cut(s)	595, 1026, 1068, 1072, 1232
BceAI	ACGGC	2 cut(s)	272, 1152
BcgI	CGANNNNNNTGC	2 cut(s)	64, 98
BciT130I	CCWGG	3 cut(s)	239, 357, 836
BciVI	GTATCC	1 cut(s)	245
BcnI	CCSGG	2 cut(s)	104, 480
BcoDI	GTCTC	2 cut(s)	64, 346
BfaI	CTAG	2 cut(s)	798, 1014
BfrI	CTTAAG	1 cut(s)	146
BfuI	GTATCC	1 cut(s)	245
BisI	GCNGC	4 cut(s)	369, 372, 1270, 1280
BlsI	GCNGC	4 cut(s)	370, 373, 1271, 1281
BmcAI	AGTACT	1 cut(s)	950
Bme1390I	CCNGG	5 cut(s)	104, 239, 357, 480, 836
Bme18I	GGWCC	4 cut(s)	431, 447, 881, 1097
BmgT120I	GGNCC	5 cut(s)	285, 431, 447, 881, 1097
BmiI	GGNNCC	4 cut(s)	72, 448, 507, 882
BmrFI	CCNGG	5 cut(s)	104, 239, 357, 480, 836
BmsI	GCATC	3 cut(s)	379, 616, 1000
BmtI	GCTAGC	1 cut(s)	1017
BpmI	CTGGAG	1 cut(s)	143
Bpu14I	TTCGAA	1 cut(s)	904
BpuEI	CTTGAG	1 cut(s)	572
BpuMI	CCSGG	2 cut(s)	104, 480
Bsa29I	ATCGAT	2 cut(s)	222, 226
BsaAI	YACGTR	1 cut(s)	233
BsaHI	GRCGYC	1 cut(s)	382
BsaJI	CCNNGG	1 cut(s)	63
BsaWI	WCCGGW	1 cut(s)	88
Bsc4I	CCNNNNNNNGG	4 cut(s)	16, 428, 835, 877
Bse118I	RCCGGY	2 cut(s)	26, 1340
Bse1I	ACTGG	1 cut(s)	206
Bse3DI	GCAATG	1 cut(s)	1279
BseBI	CCWGG	3 cut(s)	239, 357, 836
BseCI	ATCGAT	2 cut(s)	222, 226
BseDI	CCNNGG	1 cut(s)	63
BseGI	GGATG	6 cut(s)	35, 631, 712, 845, 1056, 1060
BseLI	CCNNNNNNNGG	4 cut(s)	16, 428, 835, 877
BseMI	GCAATG	1 cut(s)	1279
BseMII	CTCAG	1 cut(s)	151
BseNI	ACTGG	1 cut(s)	206
BseXI	GCAGC	4 cut(s)	355, 358, 1281, 1291
BseYI	CCCAGC	1 cut(s)	1111
BsgI	GTGCAG	2 cut(s)	381, 1298
Bsh1285I	CGRYCG	1 cut(s)	226
BshFI	GGCC	2 cut(s)	287, 1167
BshVI	ATCGAT	2 cut(s)	222, 226
BsiEI	CGRYCG	1 cut(s)	226
BsiHKAI	GWGCWC	4 cut(s)	129, 201, 280, 870
BsiSI	CCGG	6 cut(s)	27, 89, 104, 480, 1177, 1341
BsiWI	CGTACG	1 cut(s)	114
BslFI	GGGAC	2 cut(s)	35, 236
BslI	CCNNNNNNNGG	4 cut(s)	16, 428, 835, 877
BsmAI	GTCTC	2 cut(s)	64, 346
BsmBI	CGTCTC	1 cut(s)	64
BsmFI	GGGAC	2 cut(s)	35, 236
BsmI	GAATGC	2 cut(s)	641, 977
BsnI	GGCC	2 cut(s)	287, 1167
Bsp119I	TTCGAA	1 cut(s)	904
Bsp1286I	GDGCHC	4 cut(s)	129, 201, 280, 870
Bsp1407I	TGTACA	2 cut(s)	528, 1244
Bsp143I	GATC	6 cut(s)	223, 505, 611, 616, 1079, 1288
BspACI	CCGC	6 cut(s)	30, 100, 164, 545, 590, 958
BspANI	GGCC	2 cut(s)	287, 1167
BspCNI	CTCAG	1 cut(s)	150
BspDI	ATCGAT	2 cut(s)	222, 226
BspHI	TCATGA	1 cut(s)	385
BspLI	GGNNCC	4 cut(s)	72, 448, 507, 882
BspOI	GCTAGC	1 cut(s)	1017
BspPI	GGATC	3 cut(s)	500, 513, 1087
BspQI	GCTCTTC	1 cut(s)	285
BspT104I	TTCGAA	1 cut(s)	904
BspTI	CTTAAG	1 cut(s)	146
BsrBI	CCGCTC	1 cut(s)	545
BsrDI	GCAATG	1 cut(s)	1279
BsrFI	RCCGGY	2 cut(s)	26, 1340
BsrGI	TGTACA	2 cut(s)	528, 1244
BsrI	ACTGG	1 cut(s)	206
BssAI	RCCGGY	2 cut(s)	26, 1340
BssECI	CCNNGG	1 cut(s)	63
BssMI	GATC	6 cut(s)	223, 505, 611, 616, 1079, 1288
BssNI	GRCGYC	1 cut(s)	382
BssT1I	CCWWGG	1 cut(s)	63
Bst2UI	CCWGG	3 cut(s)	239, 357, 836
Bst4CI	ACNGT	4 cut(s)	519, 953, 1093, 1155
Bst6I	CTCTTC	1 cut(s)	285
BstACI	GRCGYC	1 cut(s)	382
BstAFI	CTTAAG	1 cut(s)	146
BstAPI	GCANNNNNTGC	2 cut(s)	368, 1350
BstAUI	TGTACA	2 cut(s)	528, 1244
BstBAI	YACGTR	1 cut(s)	233
BstBI	TTCGAA	1 cut(s)	904
BstC8I	GCNNGC	4 cut(s)	28, 738, 937, 1015
BstDEI	CTNAG	4 cut(s)	22, 130, 137, 1371
BstF5I	GGATG	6 cut(s)	35, 631, 712, 845, 1056, 1060
BstKTI	GATC	6 cut(s)	226, 508, 614, 619, 1082, 1291
BstMAI	GTCTC	2 cut(s)	64, 346
BstMBI	GATC	6 cut(s)	223, 505, 611, 616, 1079, 1288
BstMCI	CGRYCG	1 cut(s)	226
BstMWI	GCNNNNNNNGC	5 cut(s)	284, 368, 542, 1173, 1350
BstNI	CCWGG	3 cut(s)	239, 357, 836
BstSCI	CCNGG	5 cut(s)	102, 237, 355, 478, 834
BstSNI	TACGTA	1 cut(s)	233
BstV1I	GCAGC	4 cut(s)	355, 358, 1281, 1291
BstX2I	RGATCY	1 cut(s)	505
BstXI	CCANNNNNNTGG	1 cut(s)	1025
BstYI	RGATCY	1 cut(s)	505
Bsu15I	ATCGAT	2 cut(s)	222, 226
BsuI	GTATCC	1 cut(s)	245
BsuRI	GGCC	2 cut(s)	287, 1167
BsuTUI	ATCGAT	2 cut(s)	222, 226
BtgZI	GCGATG	1 cut(s)	517
BtsCI	GGATG	6 cut(s)	35, 631, 712, 845, 1056, 1060
BtsI	GCAGTG	2 cut(s)	1171, 1351
BtsIMutI	CAGTG	4 cut(s)	199, 334, 1171, 1351
Cac8I	GCNNGC	4 cut(s)	28, 738, 937, 1015
CaiI	CAGNNNCTG	2 cut(s)	368, 443
CciI	TCATGA	1 cut(s)	385
Cfr10I	RCCGGY	2 cut(s)	26, 1340
Cfr13I	GGNCC	5 cut(s)	285, 431, 447, 881, 1097
ClaI	ATCGAT	2 cut(s)	222, 226
Csp6I	GTAC	7 cut(s)	115, 529, 729, 764, 949, 1245, 1298
CviAII	CATG	5 cut(s)	386, 622, 863, 872, 1223
CviQI	GTAC	7 cut(s)	115, 529, 729, 764, 949, 1245, 1298
DdeI	CTNAG	4 cut(s)	22, 130, 137, 1371
DpnI	GATC	6 cut(s)	225, 507, 613, 618, 1081, 1290
DpnII	GATC	6 cut(s)	223, 505, 611, 616, 1079, 1288
DraI	TTTAAA	1 cut(s)	699
EaeI	YGGCCR	1 cut(s)	1165
Eam1104I	CTCTTC	1 cut(s)	285
EarI	CTCTTC	1 cut(s)	285
EciI	GGCGGA	1 cut(s)	45
Ecl136II	GAGCTC	2 cut(s)	127, 868
Eco105I	TACGTA	1 cut(s)	233
Eco130I	CCWWGG	1 cut(s)	63
Eco24I	GRGCYC	2 cut(s)	129, 870
Eco32I	GATATC	1 cut(s)	154
Eco47I	GGWCC	4 cut(s)	431, 447, 881, 1097
Eco53kI	GAGCTC	2 cut(s)	127, 868
Eco57I	CTGAAG	2 cut(s)	420, 726
EcoICRI	GAGCTC	2 cut(s)	127, 868
EcoO109I	RGGNCCY	2 cut(s)	447, 881
EcoRI	GAATTC	2 cut(s)	567, 964
EcoRII	CCWGG	3 cut(s)	237, 355, 834
EcoRV	GATATC	1 cut(s)	154
EcoT14I	CCWWGG	1 cut(s)	63
EcoT22I	ATGCAT	2 cut(s)	643, 877
EcoT38I	GRGCYC	2 cut(s)	129, 870
ErhI	CCWWGG	1 cut(s)	63
Esp3I	CGTCTC	1 cut(s)	64
FaeI	CATG	5 cut(s)	389, 625, 866, 875, 1226
FalI	AAGNNNNNCTT	4 cut(s)	69, 101, 418, 450
FaqI	GGGAC	2 cut(s)	35, 236
FatI	CATG	5 cut(s)	385, 621, 862, 871, 1222
Fnu4HI	GCNGC	4 cut(s)	369, 372, 1270, 1280
FokI	GGATG	6 cut(s)	22, 638, 719, 832, 1043, 1047
FriOI	GRGCYC	2 cut(s)	129, 870
Fsp4HI	GCNGC	4 cut(s)	369, 372, 1270, 1280
FspBI	CTAG	2 cut(s)	798, 1014
GluI	GCNGC	4 cut(s)	369, 372, 1270, 1280
GsaI	CCCAGC	1 cut(s)	1115
GsuI	CTGGAG	1 cut(s)	143
HaeIII	GGCC	2 cut(s)	287, 1167
HapII	CCGG	6 cut(s)	27, 89, 104, 480, 1177, 1341
Hin1I	GRCGYC	1 cut(s)	382
Hin1II	CATG	5 cut(s)	389, 625, 866, 875, 1226
HindIII	AAGCTT	2 cut(s)	213, 1119
HinfI	GANTC	3 cut(s)	249, 440, 1219
HpaII	CCGG	6 cut(s)	27, 89, 104, 480, 1177, 1341
HphI	GGTGA	1 cut(s)	344
Hpy166II	GTNNAC	3 cut(s)	431, 731, 764
Hpy188I	TCNGA	7 cut(s)	75, 346, 439, 573, 600, 616, 745
Hpy188III	TCNNGA	4 cut(s)	122, 301, 386, 995
Hpy8I	GTNNAC	3 cut(s)	431, 731, 764
Hpy99I	CGWCG	1 cut(s)	293
HpyAV	CCTTC	2 cut(s)	164, 444
HpyCH4III	ACNGT	4 cut(s)	519, 953, 1093, 1155
HpyCH4IV	ACGT	3 cut(s)	117, 232, 382
HpyF10VI	GCNNNNNNNGC	5 cut(s)	284, 368, 542, 1173, 1350
HpyF3I	CTNAG	4 cut(s)	22, 130, 137, 1371
HpySE526I	ACGT	3 cut(s)	117, 232, 382
Hsp92I	GRCGYC	1 cut(s)	382
Hsp92II	CATG	5 cut(s)	389, 625, 866, 875, 1226
KroI	GCCGGC	1 cut(s)	26
KroNI	GCCGGC	1 cut(s)	28
Kzo9I	GATC	6 cut(s)	223, 505, 611, 616, 1079, 1288
LguI	GCTCTTC	1 cut(s)	285
LmnI	GCTCC	5 cut(s)	124, 424, 542, 873, 1287
Lsp1109I	GCAGC	4 cut(s)	355, 358, 1281, 1291
LweI	GCATC	3 cut(s)	379, 616, 1000
MaeI	CTAG	2 cut(s)	798, 1014
MaeII	ACGT	3 cut(s)	117, 232, 382
MaeIII	GTNAC	7 cut(s)	140, 397, 454, 800, 1169, 1225, 1333
MalI	GATC	6 cut(s)	225, 507, 613, 618, 1081, 1290
MbiI	CCGCTC	1 cut(s)	545
MboI	GATC	6 cut(s)	223, 505, 611, 616, 1079, 1288
MboII	GAAGA	4 cut(s)	272, 586, 788, 918
MflI	RGATCY	1 cut(s)	505
MhlI	GDGCHC	4 cut(s)	129, 201, 280, 870
MlyI	GAGTC	1 cut(s)	258
MmeI	TCCRAC	2 cut(s)	244, 1075
MnlI	CCTC	6 cut(s)	61, 63, 308, 460, 739, 1354
Mph1103I	ATGCAT	2 cut(s)	643, 877
MroNI	GCCGGC	1 cut(s)	26
MseI	TTAA	6 cut(s)	147, 698, 755, 990, 1149, 1194
MslI	CAYNNNNRTG	1 cut(s)	636
MspA1I	CMGCKG	2 cut(s)	272, 736
MspCI	CTTAAG	1 cut(s)	146
MspI	CCGG	6 cut(s)	27, 89, 104, 480, 1177, 1341
MspR9I	CCNGG	5 cut(s)	104, 239, 357, 480, 836
Mva1269I	GAATGC	2 cut(s)	641, 977
MvaI	CCWGG	3 cut(s)	239, 357, 836
MwoI	GCNNNNNNNGC	5 cut(s)	284, 368, 542, 1173, 1350
NaeI	GCCGGC	1 cut(s)	28
NciI	CCSGG	2 cut(s)	104, 480
NdeII	GATC	6 cut(s)	223, 505, 611, 616, 1079, 1288
NgoMIV	GCCGGC	1 cut(s)	26
NheI	GCTAGC	1 cut(s)	1013
NlaIII	CATG	5 cut(s)	389, 625, 866, 875, 1226
NlaIV	GGNNCC	4 cut(s)	72, 448, 507, 882
NmuCI	GTSAC	1 cut(s)	1169
NsiI	ATGCAT	2 cut(s)	643, 877
NspV	TTCGAA	1 cut(s)	904
PagI	TCATGA	1 cut(s)	385
PciSI	GCTCTTC	1 cut(s)	285
PcsI	WCGNNNNNNNCGW	1 cut(s)	54
PctI	GAATGC	2 cut(s)	641, 977
PdiI	GCCGGC	1 cut(s)	28
PfeI	GAWTC	2 cut(s)	440, 1219
Pfl23II	CGTACG	1 cut(s)	114
PflMI	CCANNNNNTGG	3 cut(s)	16, 835, 877
PkrI	GCNGC	4 cut(s)	370, 373, 1271, 1281
Ple19I	CGATCG	1 cut(s)	226
PleI	GAGTC	1 cut(s)	257
PpsI	GAGTC	1 cut(s)	257
Ppu21I	YACGTR	1 cut(s)	233
PpuMI	RGGWCCY	2 cut(s)	447, 881
PshBI	ATTAAT	1 cut(s)	990
Psp124BI	GAGCTC	2 cut(s)	129, 870
Psp5II	RGGWCCY	2 cut(s)	447, 881
Psp6I	CCWGG	3 cut(s)	237, 355, 834
PspFI	CCCAGC	1 cut(s)	1111
PspGI	CCWGG	3 cut(s)	237, 355, 834
PspLI	CGTACG	1 cut(s)	114
PspN4I	GGNNCC	4 cut(s)	72, 448, 507, 882
PspPI	GGNCC	5 cut(s)	285, 431, 447, 881, 1097
PspPPI	RGGWCCY	2 cut(s)	447, 881
PstNI	CAGNNNCTG	2 cut(s)	368, 443
PsuI	RGATCY	1 cut(s)	505
PvuI	CGATCG	1 cut(s)	226
PvuII	CAGCTG	2 cut(s)	272, 736
RsaI	GTAC	7 cut(s)	116, 530, 730, 765, 950, 1246, 1299
RsaNI	GTAC	7 cut(s)	115, 529, 729, 764, 949, 1245, 1298
RseI	CAYNNNNRTG	1 cut(s)	636
SacI	GAGCTC	2 cut(s)	129, 870
SapI	GCTCTTC	1 cut(s)	285
SaqAI	TTAA	6 cut(s)	147, 698, 755, 990, 1149, 1194
SatI	GCNGC	4 cut(s)	369, 372, 1270, 1280
Sau3AI	GATC	6 cut(s)	223, 505, 611, 616, 1079, 1288
Sau96I	GGNCC	5 cut(s)	285, 431, 447, 881, 1097
ScaI	AGTACT	1 cut(s)	950
SchI	GAGTC	1 cut(s)	258
ScrFI	CCNGG	5 cut(s)	104, 239, 357, 480, 836
SduI	GDGCHC	4 cut(s)	129, 201, 280, 870
SfaNI	GCATC	3 cut(s)	379, 616, 1000
SfuI	TTCGAA	1 cut(s)	904
SinI	GGWCC	4 cut(s)	431, 447, 881, 1097
SmiMI	CAYNNNNRTG	1 cut(s)	636
SmlI	CTYRAG	2 cut(s)	146, 551
SmoI	CTYRAG	2 cut(s)	146, 551
SnaBI	TACGTA	1 cut(s)	233
SsiI	CCGC	6 cut(s)	30, 100, 164, 545, 590, 958
SspMI	CTAG	2 cut(s)	798, 1014
SstI	GAGCTC	2 cut(s)	129, 870
StyD4I	CCNGG	5 cut(s)	102, 237, 355, 478, 834
StyI	CCWWGG	1 cut(s)	63
TaaI	ACNGT	4 cut(s)	519, 953, 1093, 1155
TaiI	ACGT	3 cut(s)	120, 235, 385
TaqI	TCGA	5 cut(s)	222, 226, 610, 904, 994
TatI	WGTACW	4 cut(s)	528, 948, 1244, 1297
TfiI	GAWTC	2 cut(s)	440, 1219
Tru1I	TTAA	6 cut(s)	147, 698, 755, 990, 1149, 1194
Tru9I	TTAA	6 cut(s)	147, 698, 755, 990, 1149, 1194
TscAI	CASTG	4 cut(s)	206, 334, 1178, 1351
TseFI	GTSAC	1 cut(s)	1169
TseI	GCWGC	4 cut(s)	368, 371, 1269, 1279
Tsp45I	GTSAC	1 cut(s)	1169
TspDTI	ATGAA	4 cut(s)	804, 834, 1023, 1232
TspRI	CASTG	4 cut(s)	206, 334, 1178, 1351
Van91I	CCANNNNNTGG	3 cut(s)	16, 835, 877
Vha464I	CTTAAG	1 cut(s)	146
VpaK11BI	GGWCC	4 cut(s)	431, 447, 881, 1097
VspI	ATTAAT	1 cut(s)	990
XapI	RAATTY	7 cut(s)	567, 606, 686, 964, 1204, 1255, 1324
XspI	CTAG	2 cut(s)	798, 1014
ZraI	GACGTC	1 cut(s)	383
ZrmI	AGTACT	1 cut(s)	950
Zsp2I	ATGCAT	2 cut(s)	643, 877

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.