Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003434

Physical Location & Seq

Genomic Coordinates Reverse (-)

7198633 .. 7204097

Gene Structure 5465 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G21160.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2481 bp

ATGATGGCGGAGACTGAAGGATCAGTGGCCGATGATCGAGAATTGATCACCCGTGAAGGTGGTATTGGGACTAAGTCTCCGTGGAAAACAACGACTTCTCCTGTTGAGACTATTGACGCTCCTGTAATGGGAGCTCATTCGTGGCCTGCACTCGCCGACGCTGCCCAACAACCGCGTCCTAAGAATCCTCCGGCGCCTGCACCTGCTCCGCCGTCTAAAAACATTCCGACGTCTATCCCAATCCCTACTCCGGCCGTAACTGGTCAAGCGAAATCTAAGGGTGGTGGAAAGGCTAATCCTGGACACAAGAATCCATCTGGCCGTCATTCAAAACCAGGTCCGAGGAGCAACCAGAATGGTCCTCCTCCTCCTCCTTATCTCGTGCATGCTGTACCGTATCATCCACCTCCTTTTCCACCTATGGTGCCTCTGCCACATGCTGCTGGTCCAGATTTTCCATATGCACCTTATCCTCCCTACCCGGTTCCTGTGCCTCCTGTTACTGAGTCTGGCAATGAGAAGCAAGTTCAAGCTTCCCCTCTTCCACCTGTGTTGCCAGCTCCTCAAGGGGATCCTGGAAAGCCTTGGCCGCATCAGAGGGGTTTTGACCCCAGAAACATGCCACAAGGTGCTGGACCAAGAAATTTCGGGAGACCTCCATTTATGGGTCCAGCTCCTGGGTTCCTGGTTGGTCCAGGTCCAGGCTTTCCTGGGCCTGTATACTACTTGCCGGGTCCACCCCCTGGAGCTATAAGAGGTCCTTATCCTCCACGCTTTGCTCCATACCCTGTAAACCAGGGTCCTCCAATACTATCTCCAGAAAAACTCGACTTAAGGGATAGAGTCTTAAAACAAGTAGAGTATTATTTCAGTGATGAAAACCTTGAGAATGATCATTACCTCATTTCTTTGATGGATGAAGAAGGATGGGTTCCCACAAAAATTATAGCTGGCTTCAAAAGGGTTAAAGCAATGACTATGGATGTTGATTTTATAGTCTATGCGTTGGGGTTTTCTAATTCTGTTGAAGTGCAGGGTGACCAGATACGCAAGCGTGACAAGTGGTCTGACTGGATTCCTGCATCTAAAAAGTCAACCTCTGCGGAGACAATTGGAGACGGTGACAAAGATTCCCCAAAAAGTATAACAAGCGGGGATAATTTTGGAAACCCTTCAAAGGGTTCTTCAAAGCCTACCGTGTCCGATTTCTCTTCAGAGGGAGCTCAGTCATCAAGAACCAATAATTATAAAAGTGGTAACCTGAAATCATCAGCAGACGAAAAAAGAAATGTGGAGGACTTGTCAAACGATTTTTCAAACACTTTCTTGCTTGACGAGGAACTAGATCTGGAGCACAGAAGCCCGAGAAAGAGTGGACTGTCCATGTCCAAAAGCATTGAGTATGAAGACGATGATATGGCTGTTGATGATCAAGATATTCAGAAACTTGTAATTGTTACCCAGAATAGTGGTAAAAGTGATGGCGCTGGAATCGGTGGGACGGAAGCAAAAAATATTCCTAAGGAGCTTGCCTCCACAATCAACGATGGTCTTTACTACTTTGAGCAGGAGCTTAAAAAAAAACGATCTGGCCGTAGGAAGAACAACTCCCATTTGGATACCAAAGATGGGAAAATCAAATCTGGGGAAGGATTGAACACTAAGTTGGGCGAAAATTCCGCAGCAAATGATGGAGGGGAAGAGCATGGAATCATTACTTCACGGAGGAAGCAAAATAAGGGAACGCACAAACATCATACAGCCCATGCACGGAGGTTCTTCTCGAGTAACATAAGGAACAATGGAAATATATCAGAAAGTCCGCCTAGTAGCTCCATTGGATTTTTCTTTGGTTCTACACCACCAGACAGTCATGGCCCTAGGCTTTCGAAATTGAGTTCATCTCCACAATGTACACTTTCTGGAAGCAGTCCACCTGTGGGCTCTTTGCCAAAATCATTTCCACCTTTTCAACATCCGAGCCACCAACTGTTGGAAGAGAATGGGTTTAAACAAGAAAAGTACTTGAAGTATCGCAAGCGCTGCTTAAACGAAAGAAAGAAGCTAGGTAGCGGATGCAGTGAGGAAATGAACCATTTGTACCGATTTTGGTCGTATTTCCTCAGAGACACATTTGTTCTCTCTATGTATGATGACTTTCAGAAGTTTGCTCTTGAGGATGCAGCTGGCAATTACGATTATGGGCTGGAGTGTCTCTTTAGGTTTTATAGTTATGGTCTGGAGAAGCACTTTGATGAGGACCTTTACAAGGACTTTGAGAAGCTATCGCTTGACTTCTACCACAAGGGAAATCTGTATGGCTTGGAGAAATATTGGGCATTCCACCATTATCGAGGCAAAGAAGAACCGATAACAAAGCACCCTGAGCTAGAGAAACTACTGAAGGAAGAATTCCGTAGCATAGACGATTTCCGAGCAAAGGAAACAATCACCAACCAAAAAGAAAACAAGTCTCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000932 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005844 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009266 GO:0009408 GO:0009628 GO:0009892 GO:0009987 GO:0010286 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0032991 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050896 GO:0060255 GO:0065007 GO:0071704 GO:0090304 GO:1901360 GO:1901361 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

826

Amino Acids

91.38

Weight (kDa)

7.7

Isoelectric Point (pI)

50.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
La	PF05383	282 - 336	5.6e-23	La domain
LARP1_HEAT	PF21071	659 - 808	1.9e-57	LARP1 HEAT repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003434)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G21160 AT5G21160 AT5G21160
fragaria_vesca	FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710
malus_domestica	MD00G1106400.v1.1 MD11G1183000.v1.1
prunus_persica	Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1
pyrus_communis	pycom5153684g00350
rosa_chinensis	RchiOBHm_Chr5g0050001
rosa_laevigata	RLG00000034676
rosa_multiflora	Rmu_sc0000333.1_g000023
rosa_roxburghii	Rroxscaffold_1G00031150
rosa_rugosa	Rorug05G0256500
rosa_samantha	Rh5AG329600 Rh5BG340300 Rh5CG366300 Rh5DG352900
rosa_wichuraiana	Rw5G031120

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1248
AarI	CACCTGC	1 cut(s)	211
AatII	GACGTC	1 cut(s)	233
Acc36I	ACCTGC	1 cut(s)	211
AccB1I	GGYRCC	2 cut(s)	193, 424
AccB7I	CCANNNNNTGG	3 cut(s)	677, 743, 1993
AccI	GTMKAC	1 cut(s)	720
AccII	CGCG	1 cut(s)	175
AciI	CCGC	9 cut(s)	8, 173, 209, 590, 1103, 1152, 1680, 1823, 2073
AclWI	GGATC	3 cut(s)	28, 566, 579
AcoI	YGGCCR	5 cut(s)	27, 252, 319, 587, 1591
AcsI	RAATTY	3 cut(s)	643, 1675, 2411
AcuI	CTGAAG	3 cut(s)	36, 1197, 2423
AcyI	GRCGYC	2 cut(s)	194, 230
AdeI	CACNNNGTG	1 cut(s)	629
AfaI	GTAC	4 cut(s)	393, 1915, 2024, 2102
AfeI	AGCGCT	1 cut(s)	2042
AflII	CTTAAG	1 cut(s)	832
AhdI	GACNNNNNGTC	1 cut(s)	1063
AjuI	GAANNNNNNNTTGG	4 cut(s)	48, 80, 1649, 1681
Alw21I	GWGCWC	3 cut(s)	136, 1225, 1356
Alw26I	GTCTC	8 cut(s)	5, 81, 101, 646, 1100, 1110, 2121, 2219
AlwI	GGATC	3 cut(s)	28, 566, 579
AlwNI	CAGNNNCTG	1 cut(s)	677
Ama87I	CYCGRG	2 cut(s)	1363, 1783
Aor51HI	AGCGCT	1 cut(s)	2042
AoxI	GGCC	8 cut(s)	27, 143, 252, 319, 587, 713, 1591, 1876
ApeKI	GCWGC	5 cut(s)	161, 440, 1682, 2043, 2183
ApoI	RAATTY	3 cut(s)	643, 1675, 2411
Asp700I	GAANNNNTTC	1 cut(s)	1171
AspA2I	CCTAGG	1 cut(s)	1880
AspLEI	GCGC	3 cut(s)	196, 1487, 2043
AsuC2I	CCSGG	2 cut(s)	482, 732
AsuHPI	GGTGA	4 cut(s)	40, 1049, 1133, 2443
AsuII	TTCGAA	1 cut(s)	1889
AvaI	CYCGRG	2 cut(s)	1363, 1783
AvrII	CCTAGG	1 cut(s)	1880
AxyI	CCTNAGG	1 cut(s)	1521
BamHI	GGATCC	1 cut(s)	571
BanI	GGYRCC	2 cut(s)	193, 424
BanII	GRGCYC	3 cut(s)	136, 1225, 1946
BauI	CACGAG	1 cut(s)	380
BbsI	GAAGAC	1 cut(s)	1413
Bbv12I	GWGCWC	3 cut(s)	136, 1225, 1356
BbvI	GCAGC	5 cut(s)	148, 427, 1694, 2030, 2195
BccI	CCATC	7 cut(s)	322, 907, 921, 1475, 1541, 1622, 1685
BceAI	ACGGC	4 cut(s)	196, 239, 306, 1578
BciVI	GTATCC	1 cut(s)	1612
BclI	TGATCA	3 cut(s)	45, 892, 1429
BcnI	CCSGG	2 cut(s)	482, 732
BcoDI	GTCTC	8 cut(s)	5, 81, 101, 646, 1100, 1110, 2121, 2219
BfaI	CTAG	5 cut(s)	1343, 1827, 1881, 2066, 2390
BfoI	RGCGCY	3 cut(s)	197, 1488, 2044
BfrI	CTTAAG	1 cut(s)	832
BfuAI	ACCTGC	1 cut(s)	211
BfuI	GTATCC	1 cut(s)	1612
BglII	AGATCT	1 cut(s)	1345
BisI	GCNGC	6 cut(s)	162, 441, 590, 1683, 2044, 2184
BlnI	CCTAGG	1 cut(s)	1880
BlsI	GCNGC	6 cut(s)	163, 442, 591, 1684, 2045, 2185
BmcAI	AGTACT	1 cut(s)	2024
BmeRI	GACNNNNNGTC	1 cut(s)	1063
BmeT110I	CYCGRG	2 cut(s)	1363, 1783
BmiI	GGNNCC	9 cut(s)	195, 426, 486, 573, 669, 683, 735, 801, 933
BmsI	GCATC	4 cut(s)	601, 1091, 2066, 2170
BpiI	GAAGAC	1 cut(s)	1413
BplI	GAGNNNNNCTC	4 cut(s)	1517, 1549, 1888, 1920
BpmI	CTGGAG	5 cut(s)	765, 801, 1370, 2228, 2261
Bpu10I	CCTNAGC	1 cut(s)	2385
Bpu14I	TTCGAA	1 cut(s)	1889
BpuEI	CTTGAG	3 cut(s)	549, 905, 2195
BpuMI	CCSGG	2 cut(s)	482, 732
BsaHI	GRCGYC	2 cut(s)	194, 230
BsaI	GGTCTC	1 cut(s)	646
BsaJI	CCNNGG	8 cut(s)	80, 341, 584, 677, 710, 742, 796, 1880
BsaXI	ACNNNNNCTCC	6 cut(s)	61, 82, 91, 112, 1286, 1316
Bse1I	ACTGG	2 cut(s)	265, 1076
Bse21I	CCTNAGG	1 cut(s)	1521
Bse3DI	GCAATG	2 cut(s)	520, 978
BseDI	CCNNGG	8 cut(s)	80, 341, 584, 677, 710, 742, 796, 1880
BseGI	GGATG	7 cut(s)	400, 922, 932, 988, 1975, 2081, 2185
BseMI	GCAATG	2 cut(s)	520, 978
BseMII	CTCAG	4 cut(s)	495, 1238, 2137, 2376
BseNI	ACTGG	2 cut(s)	265, 1076
BseRI	GAGGAG	5 cut(s)	354, 357, 358, 360, 552
BseX3I	CGGCCG	1 cut(s)	252
BseXI	GCAGC	5 cut(s)	148, 427, 1694, 2030, 2195
BsgI	GTGCAG	3 cut(s)	132, 183, 1052
Bsh1236I	CGCG	1 cut(s)	175
Bsh1285I	CGRYCG	1 cut(s)	255
BshFI	GGCC	8 cut(s)	29, 145, 254, 321, 589, 715, 1593, 1878
BshNI	GGYRCC	2 cut(s)	193, 424
BsiEI	CGRYCG	1 cut(s)	255
BsiHKAI	GWGCWC	3 cut(s)	136, 1225, 1356
BsiHKCI	CYCGRG	2 cut(s)	1363, 1783
BsiSI	CCGG	4 cut(s)	191, 251, 482, 731
BslFI	GGGAC	2 cut(s)	82, 1513
BsmAI	GTCTC	8 cut(s)	5, 81, 101, 646, 1100, 1110, 2121, 2219
BsmBI	CGTCTC	1 cut(s)	1110
BsmFI	GGGAC	2 cut(s)	82, 1513
BsmI	GAATGC	1 cut(s)	2339
BsnI	GGCC	8 cut(s)	29, 145, 254, 321, 589, 715, 1593, 1878
Bso31I	GGTCTC	1 cut(s)	646
BsoBI	CYCGRG	2 cut(s)	1363, 1783
Bsp119I	TTCGAA	1 cut(s)	1889
Bsp1286I	GDGCHC	4 cut(s)	136, 1225, 1356, 1946
Bsp1407I	TGTACA	1 cut(s)	1913
Bsp143I	GATC	8 cut(s)	20, 34, 45, 571, 892, 1345, 1429, 1586
BspACI	CCGC	9 cut(s)	8, 173, 209, 590, 1103, 1152, 1680, 1823, 2073
BspANI	GGCC	8 cut(s)	29, 145, 254, 321, 589, 715, 1593, 1878
BspCNI	CTCAG	4 cut(s)	496, 1237, 2136, 2377
BspFNI	CGCG	1 cut(s)	175
BspLI	GGNNCC	9 cut(s)	195, 426, 486, 573, 669, 683, 735, 801, 933
BspMI	ACCTGC	1 cut(s)	211
BspPI	GGATC	3 cut(s)	28, 566, 579
BspQI	GCTCTTC	1 cut(s)	1695
BspT104I	TTCGAA	1 cut(s)	1889
BspT107I	GGYRCC	2 cut(s)	193, 424
BspTI	CTTAAG	1 cut(s)	832
BspTNI	GGTCTC	1 cut(s)	646
BsrDI	GCAATG	2 cut(s)	520, 978
BsrGI	TGTACA	1 cut(s)	1913
BsrI	ACTGG	2 cut(s)	265, 1076
BssECI	CCNNGG	8 cut(s)	80, 341, 584, 677, 710, 742, 796, 1880
BssMI	GATC	8 cut(s)	20, 34, 45, 571, 892, 1345, 1429, 1586
BssNAI	GTATAC	1 cut(s)	721
BssNI	GRCGYC	2 cut(s)	194, 230
BssSI	CACGAG	1 cut(s)	380
BssT1I	CCWWGG	2 cut(s)	584, 1880
Bst1107I	GTATAC	1 cut(s)	721
Bst2BI	CACGAG	1 cut(s)	380
Bst4CI	ACNGT	6 cut(s)	396, 1121, 1198, 1380, 1871, 1992
Bst6I	CTCTTC	4 cut(s)	546, 1216, 1695, 1992
BstACI	GRCGYC	2 cut(s)	194, 230
BstAFI	CTTAAG	1 cut(s)	832
BstAPI	GCANNNNNTGC	1 cut(s)	2043
BstAUI	TGTACA	1 cut(s)	1913
BstBI	TTCGAA	1 cut(s)	1889
BstC8I	GCNNGC	9 cut(s)	147, 198, 387, 558, 952, 1052, 1530, 2039, 2188
BstDEI	CTNAG	9 cut(s)	72, 180, 276, 504, 1224, 1521, 1662, 2123, 2385
BstDSI	CCRYGG	1 cut(s)	80
BstEII	GGTNACC	2 cut(s)	1037, 1256
BstENI	CCTNNNNNAGG	1 cut(s)	2267
BstF5I	GGATG	7 cut(s)	400, 922, 932, 988, 1975, 2081, 2185
BstFNI	CGCG	1 cut(s)	175
BstH2I	RGCGCY	3 cut(s)	197, 1488, 2044
BstHHI	GCGC	3 cut(s)	196, 1487, 2043
BstKTI	GATC	8 cut(s)	23, 37, 48, 574, 895, 1348, 1432, 1589
BstMAI	GTCTC	8 cut(s)	5, 81, 101, 646, 1100, 1110, 2121, 2219
BstMBI	GATC	8 cut(s)	20, 34, 45, 571, 892, 1345, 1429, 1586
BstMCI	CGRYCG	1 cut(s)	255
BstMWI	GCNNNNNNNGC	4 cut(s)	161, 589, 2043, 2386
BstNSI	RCATGY	3 cut(s)	389, 440, 622
BstPI	GGTNACC	2 cut(s)	1037, 1256
BstUI	CGCG	1 cut(s)	175
BstV1I	GCAGC	5 cut(s)	148, 427, 1694, 2030, 2195
BstV2I	GAAGAC	1 cut(s)	1413
BstX2I	RGATCY	2 cut(s)	571, 1345
BstXI	CCANNNNNNTGG	1 cut(s)	1469
BstYI	RGATCY	2 cut(s)	571, 1345
BstZ17I	GTATAC	1 cut(s)	721
BstZI	CGGCCG	1 cut(s)	252
Bsu36I	CCTNAGG	1 cut(s)	1521
BsuI	GTATCC	1 cut(s)	1612
BsuRI	GGCC	8 cut(s)	29, 145, 254, 321, 589, 715, 1593, 1878
BtgI	CCRYGG	1 cut(s)	80
BtsCI	GGATG	7 cut(s)	400, 922, 932, 988, 1975, 2081, 2185
BtsI	GCAGTG	1 cut(s)	2086
BtsIMutI	CAGTG	4 cut(s)	30, 877, 2086, 2476
BveI	ACCTGC	1 cut(s)	211
Cac8I	GCNNGC	9 cut(s)	147, 198, 387, 558, 952, 1052, 1530, 2039, 2188
CaiI	CAGNNNCTG	1 cut(s)	677
CfoI	GCGC	3 cut(s)	196, 1487, 2043
CseI	GACGC	3 cut(s)	125, 164, 167
CsiI	ACCWGGT	1 cut(s)	334
Csp6I	GTAC	4 cut(s)	392, 1914, 2023, 2101
CspCI	CAANNNNNGTGG	2 cut(s)	534, 569
CviAII	CATG	7 cut(s)	386, 437, 619, 1384, 1706, 1766, 1874
CviQI	GTAC	4 cut(s)	392, 1914, 2023, 2101
DdeI	CTNAG	9 cut(s)	72, 180, 276, 504, 1224, 1521, 1662, 2123, 2385
DinI	GGCGCC	1 cut(s)	195
DpnI	GATC	8 cut(s)	22, 36, 47, 573, 894, 1347, 1431, 1588
DpnII	GATC	8 cut(s)	20, 34, 45, 571, 892, 1345, 1429, 1586
DraI	TTTAAA	1 cut(s)	2011
DraIII	CACNNNGTG	1 cut(s)	629
DriI	GACNNNNNGTC	1 cut(s)	1063
EaeI	YGGCCR	5 cut(s)	27, 252, 319, 587, 1591
EagI	CGGCCG	1 cut(s)	252
Eam1104I	CTCTTC	4 cut(s)	546, 1216, 1695, 1992
Eam1105I	GACNNNNNGTC	1 cut(s)	1063
EarI	CTCTTC	4 cut(s)	546, 1216, 1695, 1992
EciI	GGCGGA	3 cut(s)	23, 198, 1812
Ecl136II	GAGCTC	2 cut(s)	134, 1223
EclXI	CGGCCG	1 cut(s)	252
Eco130I	CCWWGG	2 cut(s)	584, 1880
Eco24I	GRGCYC	3 cut(s)	136, 1225, 1946
Eco31I	GGTCTC	1 cut(s)	646
Eco47III	AGCGCT	1 cut(s)	2042
Eco52I	CGGCCG	1 cut(s)	252
Eco53kI	GAGCTC	2 cut(s)	134, 1223
Eco57I	CTGAAG	3 cut(s)	36, 1197, 2423
Eco81I	CCTNAGG	1 cut(s)	1521
Eco88I	CYCGRG	2 cut(s)	1363, 1783
Eco91I	GGTNACC	2 cut(s)	1037, 1256
EcoICRI	GAGCTC	2 cut(s)	134, 1223
EcoNI	CCTNNNNNAGG	1 cut(s)	2267
EcoO109I	RGGNCCY	3 cut(s)	758, 800, 2260
EcoO65I	GGTNACC	2 cut(s)	1037, 1256
EcoRI	GAATTC	1 cut(s)	2411
EcoT14I	CCWWGG	2 cut(s)	584, 1880
EcoT38I	GRGCYC	3 cut(s)	136, 1225, 1946
EgeI	GGCGCC	1 cut(s)	195
EheI	GGCGCC	1 cut(s)	195
ErhI	CCWWGG	2 cut(s)	584, 1880
Esp3I	CGTCTC	1 cut(s)	1110
FaeI	CATG	7 cut(s)	389, 440, 622, 1387, 1709, 1769, 1877
FalI	AAGNNNNNCTT	4 cut(s)	745, 777, 2030, 2062
FaqI	GGGAC	2 cut(s)	82, 1513
FatI	CATG	7 cut(s)	385, 436, 618, 1383, 1705, 1765, 1873
FauI	CCCGC	1 cut(s)	1145
FauNDI	CATATG	1 cut(s)	460
FbaI	TGATCA	3 cut(s)	45, 892, 1429
FblI	GTMKAC	1 cut(s)	720
Fnu4HI	GCNGC	6 cut(s)	162, 441, 590, 1683, 2044, 2184
FokI	GGATG	7 cut(s)	387, 929, 939, 995, 1962, 2088, 2192
FriOI	GRGCYC	3 cut(s)	136, 1225, 1946
Fsp4HI	GCNGC	6 cut(s)	162, 441, 590, 1683, 2044, 2184
FspBI	CTAG	5 cut(s)	1343, 1827, 1881, 2066, 2390
GlaI	GCGC	3 cut(s)	195, 1486, 2042
GluI	GCNGC	6 cut(s)	162, 441, 590, 1683, 2044, 2184
GsuI	CTGGAG	5 cut(s)	765, 801, 1370, 2228, 2261
HaeII	RGCGCY	3 cut(s)	197, 1488, 2044
HaeIII	GGCC	8 cut(s)	29, 145, 254, 321, 589, 715, 1593, 1878
HapII	CCGG	4 cut(s)	191, 251, 482, 731
HgaI	GACGC	3 cut(s)	125, 164, 167
HhaI	GCGC	3 cut(s)	196, 1487, 2043
Hin1I	GRCGYC	2 cut(s)	194, 230
Hin1II	CATG	7 cut(s)	389, 440, 622, 1387, 1709, 1769, 1877
Hin6I	GCGC	3 cut(s)	194, 1485, 2041
HinP1I	GCGC	3 cut(s)	194, 1485, 2041
HincII	GTYRAC	1 cut(s)	1095
HindII	GTYRAC	1 cut(s)	1095
HindIII	AAGCTT	1 cut(s)	531
HinfI	GANTC	8 cut(s)	184, 310, 506, 843, 1075, 1130, 1491, 1710
HpaII	CCGG	4 cut(s)	191, 251, 482, 731
HphI	GGTGA	4 cut(s)	40, 1049, 1133, 2443
Hpy166II	GTNNAC	7 cut(s)	721, 737, 793, 1095, 1376, 1916, 1934
Hpy8I	GTNNAC	7 cut(s)	721, 737, 793, 1095, 1376, 1916, 1934
Hpy99I	CGWCG	2 cut(s)	161, 232
HpyAV	CCTTC	6 cut(s)	11, 50, 917, 1182, 1643, 2398
HpyCH4III	ACNGT	6 cut(s)	396, 1121, 1198, 1380, 1871, 1992
HpyCH4IV	ACGT	1 cut(s)	230
HpyCH4V	TGCA	9 cut(s)	149, 200, 385, 464, 1033, 1082, 1769, 2079, 2183
HpyF10VI	GCNNNNNNNGC	4 cut(s)	161, 589, 2043, 2386
HpyF3I	CTNAG	9 cut(s)	72, 180, 276, 504, 1224, 1521, 1662, 2123, 2385
HpySE526I	ACGT	1 cut(s)	230
Hsp92I	GRCGYC	2 cut(s)	194, 230
Hsp92II	CATG	7 cut(s)	389, 440, 622, 1387, 1709, 1769, 1877
HspAI	GCGC	3 cut(s)	194, 1485, 2041
KasI	GGCGCC	1 cut(s)	193
Ksp22I	TGATCA	3 cut(s)	45, 892, 1429
Kzo9I	GATC	8 cut(s)	20, 34, 45, 571, 892, 1345, 1429, 1586
LguI	GCTCTTC	1 cut(s)	1695
Lsp1109I	GCAGC	5 cut(s)	148, 427, 1694, 2030, 2195
LweI	GCATC	4 cut(s)	601, 1091, 2066, 2170
MabI	ACCWGGT	1 cut(s)	334
MaeI	CTAG	5 cut(s)	1343, 1827, 1881, 2066, 2390
MaeII	ACGT	1 cut(s)	230
MaeIII	GTNAC	8 cut(s)	256, 499, 1037, 1055, 1121, 1256, 1456, 1787
MalI	GATC	8 cut(s)	22, 36, 47, 573, 894, 1347, 1431, 1588
MboI	GATC	8 cut(s)	20, 34, 45, 571, 892, 1345, 1429, 1586
MfeI	CAATTG	1 cut(s)	1110
MflI	RGATCY	2 cut(s)	571, 1345
MhlI	GDGCHC	4 cut(s)	136, 1225, 1356, 1946
Mly113I	GGCGCC	1 cut(s)	194
MlyI	GAGTC	2 cut(s)	515, 852
MmeI	TCCRAC	2 cut(s)	251, 1974
MroXI	GAANNNNTTC	1 cut(s)	1171
MseI	TTAA	6 cut(s)	833, 848, 966, 1575, 2010, 2048
MslI	CAYNNNNRTG	1 cut(s)	2253
MspA1I	CMGCKG	1 cut(s)	2186
MspCI	CTTAAG	1 cut(s)	832
MspI	CCGG	4 cut(s)	191, 251, 482, 731
MssI	GTTTAAAC	1 cut(s)	2011
MunI	CAATTG	1 cut(s)	1110
Mva1269I	GAATGC	1 cut(s)	2339
MvnI	CGCG	1 cut(s)	175
MwoI	GCNNNNNNNGC	4 cut(s)	161, 589, 2043, 2386
NarI	GGCGCC	1 cut(s)	194
NciI	CCSGG	2 cut(s)	482, 732
NdeI	CATATG	1 cut(s)	460
NdeII	GATC	8 cut(s)	20, 34, 45, 571, 892, 1345, 1429, 1586
NlaIII	CATG	7 cut(s)	389, 440, 622, 1387, 1709, 1769, 1877
NlaIV	GGNNCC	9 cut(s)	195, 426, 486, 573, 669, 683, 735, 801, 933
NmuCI	GTSAC	3 cut(s)	1037, 1055, 1121
NspI	RCATGY	3 cut(s)	389, 440, 622
NspV	TTCGAA	1 cut(s)	1889
PaeI	GCATGC	1 cut(s)	389
PaeR7I	CTCGAG	1 cut(s)	1783
PaqCI	CACCTGC	1 cut(s)	211
PciSI	GCTCTTC	1 cut(s)	1695
PcsI	WCGNNNNNNNCGW	1 cut(s)	1591
PctI	GAATGC	1 cut(s)	2339
PdmI	GAANNNNTTC	1 cut(s)	1171
PfeI	GAWTC	6 cut(s)	184, 310, 1075, 1130, 1491, 1710
PflFI	GACNNNGTC	1 cut(s)	73
PflMI	CCANNNNNTGG	3 cut(s)	677, 743, 1993
PfoI	TCCNGGA	2 cut(s)	298, 574
PkrI	GCNGC	6 cut(s)	163, 442, 591, 1684, 2045, 2185
PleI	GAGTC	2 cut(s)	514, 851
PluTI	GGCGCC	1 cut(s)	197
PmeI	GTTTAAAC	1 cut(s)	2011
PpsI	GAGTC	2 cut(s)	514, 851
PpuMI	RGGWCCY	3 cut(s)	758, 800, 2260
PsiI	TTATAA	1 cut(s)	1248
Psp124BI	GAGCTC	2 cut(s)	136, 1225
Psp5II	RGGWCCY	3 cut(s)	758, 800, 2260
PspEI	GGTNACC	2 cut(s)	1037, 1256
PspN4I	GGNNCC	9 cut(s)	195, 426, 486, 573, 669, 683, 735, 801, 933
PspPPI	RGGWCCY	3 cut(s)	758, 800, 2260
PsrI	GAACNNNNNNTAC	2 cut(s)	2084, 2116
PstNI	CAGNNNCTG	1 cut(s)	677
PsuI	RGATCY	2 cut(s)	571, 1345
PsyI	GACNNNGTC	1 cut(s)	73
PvuII	CAGCTG	1 cut(s)	2186
RsaI	GTAC	4 cut(s)	393, 1915, 2024, 2102
RsaNI	GTAC	4 cut(s)	392, 1914, 2023, 2101
RseI	CAYNNNNRTG	1 cut(s)	2253
SacI	GAGCTC	2 cut(s)	136, 1225
SapI	GCTCTTC	1 cut(s)	1695
SaqAI	TTAA	6 cut(s)	833, 848, 966, 1575, 2010, 2048
SatI	GCNGC	6 cut(s)	162, 441, 590, 1683, 2044, 2184
Sau3AI	GATC	8 cut(s)	20, 34, 45, 571, 892, 1345, 1429, 1586
ScaI	AGTACT	1 cut(s)	2024
SchI	GAGTC	2 cut(s)	515, 852
SduI	GDGCHC	4 cut(s)	136, 1225, 1356, 1946
SexAI	ACCWGGT	1 cut(s)	334
SfaNI	GCATC	4 cut(s)	601, 1091, 2066, 2170
SfoI	GGCGCC	1 cut(s)	195
Sfr274I	CTCGAG	1 cut(s)	1783
SfuI	TTCGAA	1 cut(s)	1889
SlaI	CTCGAG	1 cut(s)	1783
SmiMI	CAYNNNNRTG	1 cut(s)	2253
SmlI	CTYRAG	5 cut(s)	564, 832, 884, 1783, 2174
SmoI	CTYRAG	5 cut(s)	564, 832, 884, 1783, 2174
SphI	GCATGC	1 cut(s)	389
SsiI	CCGC	9 cut(s)	8, 173, 209, 590, 1103, 1152, 1680, 1823, 2073
SspDI	GGCGCC	1 cut(s)	193
SspI	AATATT	2 cut(s)	1516, 2333
SspMI	CTAG	5 cut(s)	1343, 1827, 1881, 2066, 2390
SstI	GAGCTC	2 cut(s)	136, 1225
StyI	CCWWGG	2 cut(s)	584, 1880
TaaI	ACNGT	6 cut(s)	396, 1121, 1198, 1380, 1871, 1992
TaiI	ACGT	1 cut(s)	233
TaqI	TCGA	5 cut(s)	37, 828, 1784, 1889, 2353
TatI	WGTACW	2 cut(s)	1913, 2022
TauI	GCSGC	1 cut(s)	592
TfiI	GAWTC	6 cut(s)	184, 310, 1075, 1130, 1491, 1710
Tru1I	TTAA	6 cut(s)	833, 848, 966, 1575, 2010, 2048
Tru9I	TTAA	6 cut(s)	833, 848, 966, 1575, 2010, 2048
TscAI	CASTG	3 cut(s)	30, 877, 2086
TseFI	GTSAC	3 cut(s)	1037, 1055, 1121
TseI	GCWGC	5 cut(s)	161, 440, 1682, 2043, 2183
Tsp45I	GTSAC	3 cut(s)	1037, 1055, 1121
TspDTI	ATGAA	5 cut(s)	891, 933, 1419, 1890, 2105
TspGWI	ACGGA	5 cut(s)	69, 1517, 1738, 1786, 2405
TspRI	CASTG	3 cut(s)	30, 877, 2086
Tth111I	GACNNNGTC	1 cut(s)	73
Van91I	CCANNNNNTGG	3 cut(s)	677, 743, 1993
Vha464I	CTTAAG	1 cut(s)	832
XagI	CCTNNNNNAGG	1 cut(s)	2267
XapI	RAATTY	3 cut(s)	643, 1675, 2411
XceI	RCATGY	3 cut(s)	389, 440, 622
XhoI	CTCGAG	1 cut(s)	1783
XmaJI	CCTAGG	1 cut(s)	1880
XmiI	GTMKAC	1 cut(s)	720
XmnI	GAANNNNTTC	1 cut(s)	1171
XspI	CTAG	5 cut(s)	1343, 1827, 1881, 2066, 2390
ZraI	GACGTC	1 cut(s)	231
ZrmI	AGTACT	1 cut(s)	2024

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.