Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0003434

Physical Location & Seq

Genomic Coordinates Reverse (-)

20760359 .. 20772866

Gene Structure 12508 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g27710.t12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2595 bp

ATGGCTGCCGAGTCCTGGCCTGCTCTCGCTGACGCCCAGGCCCAGGCCCATAGGTCCAAGACTCCCGACCTCCCCGCTCCTCAGGTATTGATATTGCAGCAAAAGACAAATCGGCCTGGAAACTCTAATGCTTCGCACAAGCATTCACCGTCACAGCATCAAAAGACTGGCTCTAAACGTAATCCCAATGTTGCACCTCCTTTCCCAGTACCCTTACCCTACCATCAACCACCACTTCCACCTGTTTTTCATACCATGGTACATCCGCCACACATTGCTGCTTCTGGTTTTGCTTTCCAGCCATACCATGGACCCATTGCAGATGTTGAAAATCATATAGCAAAATCTGGATCTGAGACACCAGTGCAAGGTTTTGTGCAACCAGTTCAGCCTCAACCGCGAGGTAATCCAAATGTGTATGGTGTCAATTTTTCTTCCAGAAGACCCAATATGCAGGAGCCTGGTGGGCCTGGTGTCCATTGGAATCAAGCTTGGTATCAGCAACGGCCATTTAATCCCAGAGAGAACATTCCTATGCAACAGGGAGTTGGACCTAGGCCTTTCTTAAGACCTCAATTTTTTGGTCCAGCTCCCGGGTTCATGGTTGGCCCGGCCATTCCAGGACCTGTTCCCATGTGCTATGTTCCTGTTCCGCCAACTGGTGCAATTAGGGGACCTCATCCTCCCCACTTTATGCCACATCCATTAAATCCAGGGGCTCCATTACTACACCCGGAGAGACATCCTGTAGCGTTAAGGGACAACATTATAAAACAAATAGAGTATTATTTTAGTGATGAAAATCTAAAGAATGACAAGTACCTAATTTCATTGATGGATGACCAAGGGTGGGTGCCAATAACCACTATTGCTGACTTTAAAAGGGTTAAGAAAATGTGTACAGACATAGCATTTATTCTTGACTCACTGCAGGGTTCAGCTACCGTAGAAGTGCAGGGCAACAAGATACGGAGACGAGTTGAGTGGACCAAGTGGATCACAACTTCTACAGACTTAACATCAACATCAAAACAGGCTCAACTTGAACAGAGGGCTATAAATGTTTTAGAGAATAGTGATGCCAGTGATGGAAGGACCACTTGCGAAAAGAATGTTATAGTTTCATCTTGTGAAAAGAATTTGATGGTGGACGAGCCATCCAATACCGAACATTGCCTTGATAGTCTTAAAGTTGATGGGAAATTACCAGTCTTGACTTCGAATAATGGTGATAAAATTCGAAAGTTTACTGCCAAATCAAATTGCAAGATCACATATCTTAAAACAAATCATGGTTCAGGCTTCCCTGACCAATCCGAGGGAACTGAGCGTTCAGATAATGATATGAAGAATCTTGGTGGTCTGTCAAGTGATTTCGCAAACACATTTATGCTCGATGAAGAGCTAGAGCTCGAGCAGAAAATAGTAAAGAAGGATGATATCTCTCCTGGTAGAAGGGTTGATGACGAAGATGATGAGATTGTAGTCCTTGATCAGGATGTCCAGAGACTTGTAATTGTTACCAGGAATTGCAAAGTAGGTGAAGGATCTAAAACTGATGATAAGGAATCAAAAACCATTTCCAATGAGCTTGCTTCTGCTATAAATGAAGGCCTCTATTTCTATGAGCAGGAACTGAAAACCAAGCGATCAAACCGTAAAAAGAACAACTCCAGTTACGAAAATAGAGATGCAAGCTCAAGAGTTTCAAGTTTTTCCAAAGGTTTTTCAAATTTGAAGCGTTCTGAAATATCTGGGAACAACAGTGCCATTGAAGAGTCTATAAGTGCTAATTCCCGAAAGAAGCAAAGCAAAAACTCCCAGAATCAACAGTCATCCCATAGACAGCGATTCTTCTCGAGCAACTTTAGAAATTATGGAACCGGTCGGAACTCTCTAGGAATCGTATCTGAAAGTCCACCAAGTAACTCGGTTGGATTTTTCTTTAGTTCAACACCTCCTGAAAATCATGGTCCAAGGTCTTCCAAGTTGAGTGGTTCTCCCCATGGGGTTCTCTCAGGAAGCAGTCCACCAGTGGGTTCTGTGCCAAAGTCATTTCCACCATTTCAGCATCCAAGTCATCAGCTTCTAGAAGAAAATGGTTTCAAACAGCAGAAGTACCTTAAGTATCACAAGCGTTGCCTAAATGACAGAAAGAAGTCGGGAATCGGTTGCAGTGAGGAAATGAACACTTTATATAGATTTTGGTCTTATTTCCTAAGAAACATGTTCAACTGCTCAATGTACAATGAGTTTCGGAAATATGCACTTGAAGACGCTGCTGCTAGCTATCATTATGGAGTAGAGTGCCTTTTCAGATTTTATAGTTATGGGTTGGAGAAGGAATTTCGAGATGACCTGTATGATGACTTTGAACAGCTGACTCTGGAGTTTTACCATGAAGGAAATCTCTATGGCCTGGAAAAATATTGGGCATTTCATCATTATAGGGAGAAACGGGGTCAGAAGGAGCCTCTTAGAAAAAATCAAGAATTGAATCGCTTGCTTAGGGAAGTATACCGTAGCTTGGATGATTTCCGTGCCAAAGAGAGAACTACAACGGCAATCACTTCCGTGAAAGAGAGGAGTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000932 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005844 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009266 GO:0009408 GO:0009628 GO:0009892 GO:0009987 GO:0010286 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0032991 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050896 GO:0060255 GO:0065007 GO:0071704 GO:0090304 GO:1901360 GO:1901361 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

865

Amino Acids

97.71

Weight (kDa)

8.89

Isoelectric Point (pI)

52.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
La	PF05383	284 - 339	5e-24	La domain
LARP1_HEAT	PF21071	719 - 840	1.4e-56	LARP1 HEAT repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003434)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G21160 AT5G21160 AT5G21160
fragaria_vesca	FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710
malus_domestica	MD00G1106400.v1.1 MD11G1183000.v1.1
prunus_persica	Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1
pyrus_communis	pycom5153684g00350
rosa_chinensis	RchiOBHm_Chr5g0050001
rosa_laevigata	RLG00000034676
rosa_multiflora	Rmu_sc0000333.1_g000023
rosa_roxburghii	Rroxscaffold_1G00031150
rosa_rugosa	Rorug05G0256500
rosa_samantha	Rh5AG329600 Rh5BG340300 Rh5CG366300 Rh5DG352900
rosa_wichuraiana	Rw5G031120

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	770
AccB1I	GGYRCC	1 cut(s)	853
AccB7I	CCANNNNNTGG	1 cut(s)	308
AccBSI	CCGCTC	1 cut(s)	77
AccI	GTMKAC	1 cut(s)	2517
AccII	CGCG	1 cut(s)	400
AciI	CCGC	4 cut(s)	75, 266, 398, 653
AclWI	GGATC	3 cut(s)	358, 1004, 1555
AcoI	YGGCCR	2 cut(s)	506, 612
AcsI	RAATTY	4 cut(s)	1138, 1236, 1732, 2345
AcyI	GRCGYC	1 cut(s)	33
AfaI	GTAC	6 cut(s)	210, 261, 821, 901, 2120, 2246
AflII	CTTAAG	2 cut(s)	565, 2123
AflIII	ACRYGT	1 cut(s)	2226
AgeI	ACCGGT	1 cut(s)	1883
AleI	CACNNNNGTG	1 cut(s)	2573
Alw21I	GWGCWC	1 cut(s)	1413
Alw26I	GTCTC	4 cut(s)	350, 733, 967, 1501
AlwI	GGATC	3 cut(s)	358, 1004, 1555
AlwNI	CAGNNNCTG	2 cut(s)	626, 1636
Ama87I	CYCGRG	3 cut(s)	593, 1412, 1858
ApeKI	GCWGC	5 cut(s)	5, 97, 278, 2279, 2282
ApoI	RAATTY	4 cut(s)	1138, 1236, 1732, 2345
AsiGI	ACCGGT	1 cut(s)	1883
AspA2I	CCTAGG	1 cut(s)	554
AsuC2I	CCSGG	4 cut(s)	594, 595, 611, 734
AsuHPI	GGTGA	3 cut(s)	138, 1241, 1553
AsuII	TTCGAA	2 cut(s)	1220, 1240
AsuNHI	GCTAGC	1 cut(s)	2285
AvaI	CYCGRG	3 cut(s)	593, 1412, 1858
AvaII	GGWCC	9 cut(s)	54, 311, 551, 584, 623, 674, 987, 1095, 1973
AvrII	CCTAGG	1 cut(s)	554
AxyI	CCTNAGG	1 cut(s)	81
BanI	GGYRCC	1 cut(s)	853
BanII	GRGCYC	2 cut(s)	721, 1413
BbsI	GAAGAC	3 cut(s)	448, 1974, 2280
Bbv12I	GWGCWC	1 cut(s)	1413
BbvI	GCAGC	4 cut(s)	109, 265, 2266, 2269
BccI	CCATC	6 cut(s)	231, 829, 1082, 1138, 1165, 1190
BceAI	ACGGC	2 cut(s)	521, 2577
BclI	TGATCA	1 cut(s)	1492
BcnI	CCSGG	4 cut(s)	594, 595, 611, 734
BcoDI	GTCTC	4 cut(s)	350, 733, 967, 1501
BfaI	CTAG	5 cut(s)	555, 1406, 1898, 2090, 2286
BfmI	CTRYAG	3 cut(s)	747, 929, 1008
BfrI	CTTAAG	2 cut(s)	565, 2123
BglI	GCCNNNNNGGC	1 cut(s)	466
BisI	GCNGC	5 cut(s)	6, 98, 279, 2280, 2283
BlnI	CCTAGG	1 cut(s)	554
BlsI	GCNGC	5 cut(s)	7, 99, 280, 2281, 2284
Bme18I	GGWCC	9 cut(s)	54, 311, 551, 584, 623, 674, 987, 1095, 1973
BmeT110I	CYCGRG	3 cut(s)	593, 1412, 1858
BmiI	GGNNCC	7 cut(s)	313, 459, 675, 720, 855, 1882, 2472
BmrI	ACTGGG	1 cut(s)	200
BmsI	GCATC	4 cut(s)	166, 1069, 1681, 2080
BmtI	GCTAGC	1 cut(s)	2289
BmuI	ACTGGG	1 cut(s)	200
BpiI	GAAGAC	3 cut(s)	448, 1974, 2280
BplI	GAGNNNNNCTC	2 cut(s)	1984, 2016
BpmI	CTGGAG	2 cut(s)	1657, 2408
Bpu10I	CCTNAGC	1 cut(s)	2507
Bpu14I	TTCGAA	2 cut(s)	1220, 1240
BpuEI	CTTGAG	1 cut(s)	1684
BpuMI	CCSGG	4 cut(s)	594, 595, 611, 734
BsaBI	GATNNNNATC	1 cut(s)	801
BsaHI	GRCGYC	1 cut(s)	33
BsaWI	WCCGGW	1 cut(s)	1883
Bse118I	RCCGGY	1 cut(s)	1883
Bse1I	ACTGG	9 cut(s)	172, 206, 362, 383, 664, 1083, 1208, 1674, 2033
Bse21I	CCTNAGG	1 cut(s)	81
Bse3DI	GCAATG	3 cut(s)	273, 315, 1171
Bse8I	GATNNNNATC	1 cut(s)	801
BseJI	GATNNNNATC	1 cut(s)	801
BseMI	GCAATG	3 cut(s)	273, 315, 1171
BseMII	CTCAG	4 cut(s)	95, 345, 1317, 2031
BseNI	ACTGG	9 cut(s)	172, 206, 362, 383, 664, 1083, 1208, 1674, 2033
BseRI	GAGGAG	1 cut(s)	69
BseXI	GCAGC	4 cut(s)	109, 265, 2266, 2269
BsgI	GTGCAG	1 cut(s)	974
Bsh1236I	CGCG	1 cut(s)	400
Bsh1285I	CGRYCG	1 cut(s)	1888
BshNI	GGYRCC	1 cut(s)	853
BshTI	ACCGGT	1 cut(s)	1883
BsiEI	CGRYCG	1 cut(s)	1888
BsiHKAI	GWGCWC	1 cut(s)	1413
BsiHKCI	CYCGRG	3 cut(s)	593, 1412, 1858
BsiSI	CCGG	4 cut(s)	594, 611, 734, 1884
BslFI	GGGAC	2 cut(s)	687, 773
BsmAI	GTCTC	4 cut(s)	350, 733, 967, 1501
BsmBI	CGTCTC	1 cut(s)	967
BsmFI	GGGAC	2 cut(s)	687, 773
BsmI	GAATGC	1 cut(s)	142
BsoBI	CYCGRG	3 cut(s)	593, 1412, 1858
Bsp119I	TTCGAA	2 cut(s)	1220, 1240
Bsp1286I	GDGCHC	2 cut(s)	721, 1413
Bsp1407I	TGTACA	2 cut(s)	899, 2244
Bsp143I	GATC	6 cut(s)	350, 996, 1269, 1492, 1547, 1649
Bsp19I	CCATGG	3 cut(s)	255, 307, 2005
BspACI	CCGC	4 cut(s)	75, 266, 398, 653
BspCNI	CTCAG	4 cut(s)	94, 346, 1318, 2030
BspFNI	CGCG	1 cut(s)	400
BspLI	GGNNCC	7 cut(s)	313, 459, 675, 720, 855, 1882, 2472
BspMAI	CTGCAG	1 cut(s)	933
BspOI	GCTAGC	1 cut(s)	2289
BspPI	GGATC	3 cut(s)	358, 1004, 1555
BspQI	GCTCTTC	1 cut(s)	1395
BspT104I	TTCGAA	2 cut(s)	1220, 1240
BspT107I	GGYRCC	1 cut(s)	853
BspTI	CTTAAG	2 cut(s)	565, 2123
BsrBI	CCGCTC	1 cut(s)	77
BsrDI	GCAATG	3 cut(s)	273, 315, 1171
BsrFI	RCCGGY	1 cut(s)	1883
BsrGI	TGTACA	2 cut(s)	899, 2244
BsrI	ACTGG	9 cut(s)	172, 206, 362, 383, 664, 1083, 1208, 1674, 2033
BssAI	RCCGGY	1 cut(s)	1883
BssMI	GATC	6 cut(s)	350, 996, 1269, 1492, 1547, 1649
BssNAI	GTATAC	1 cut(s)	2518
BssNI	GRCGYC	1 cut(s)	33
BssT1I	CCWWGG	6 cut(s)	255, 307, 554, 844, 1976, 2005
Bst1107I	GTATAC	1 cut(s)	2518
Bst4CI	ACNGT	6 cut(s)	150, 946, 1658, 1766, 1833, 2522
Bst6I	CTCTTC	2 cut(s)	1395, 1770
BstACI	GRCGYC	1 cut(s)	33
BstAFI	CTTAAG	2 cut(s)	565, 2123
BstAUI	TGTACA	2 cut(s)	899, 2244
BstBI	TTCGAA	2 cut(s)	1220, 1240
BstC8I	GCNNGC	5 cut(s)	21, 1593, 1696, 2287, 2504
BstDEI	CTNAG	7 cut(s)	81, 354, 1326, 2017, 2219, 2477, 2507
BstDSI	CCRYGG	3 cut(s)	255, 307, 2005
BstENI	CCTNNNNNAGG	1 cut(s)	1493
BstFNI	CGCG	1 cut(s)	400
BstKTI	GATC	6 cut(s)	353, 999, 1272, 1495, 1550, 1652
BstMAI	GTCTC	4 cut(s)	350, 733, 967, 1501
BstMBI	GATC	6 cut(s)	350, 996, 1269, 1492, 1547, 1649
BstMCI	CGRYCG	1 cut(s)	1888
BstMWI	GCNNNNNNNGC	2 cut(s)	397, 466
BstNSI	RCATGY	1 cut(s)	2230
BstSFI	CTRYAG	3 cut(s)	747, 929, 1008
BstUI	CGCG	1 cut(s)	400
BstV1I	GCAGC	4 cut(s)	109, 265, 2266, 2269
BstV2I	GAAGAC	3 cut(s)	448, 1974, 2280
BstX2I	RGATCY	2 cut(s)	350, 1547
BstYI	RGATCY	2 cut(s)	350, 1547
BstZ17I	GTATAC	1 cut(s)	2518
Bsu36I	CCTNAGG	1 cut(s)	81
BtgI	CCRYGG	3 cut(s)	255, 307, 2005
BtsI	GCAGTG	2 cut(s)	926, 2182
BtsIMutI	CAGTG	6 cut(s)	369, 926, 1090, 1771, 2040, 2182
Cac8I	GCNNGC	5 cut(s)	21, 1593, 1696, 2287, 2504
CaiI	CAGNNNCTG	2 cut(s)	626, 1636
Cfr10I	RCCGGY	1 cut(s)	1883
Cfr9I	CCCGGG	1 cut(s)	593
CseI	GACGC	2 cut(s)	41, 2285
Csp6I	GTAC	6 cut(s)	209, 260, 820, 900, 2119, 2245
CspAI	ACCGGT	1 cut(s)	1883
CspCI	CAANNNNNGTGG	2 cut(s)	1975, 2010
CviAII	CATG	9 cut(s)	256, 308, 601, 634, 1292, 1970, 2006, 2227, 2399
CviQI	GTAC	6 cut(s)	209, 260, 820, 900, 2119, 2245
DdeI	CTNAG	7 cut(s)	81, 354, 1326, 2017, 2219, 2477, 2507
DpnI	GATC	6 cut(s)	352, 998, 1271, 1494, 1549, 1651
DpnII	GATC	6 cut(s)	350, 996, 1269, 1492, 1547, 1649
DraI	TTTAAA	1 cut(s)	880
EaeI	YGGCCR	2 cut(s)	506, 612
Eam1104I	CTCTTC	2 cut(s)	1395, 1770
EarI	CTCTTC	2 cut(s)	1395, 1770
EciI	GGCGGA	2 cut(s)	255, 642
Ecl136II	GAGCTC	1 cut(s)	1411
Eco130I	CCWWGG	6 cut(s)	255, 307, 554, 844, 1976, 2005
Eco147I	AGGCCT	2 cut(s)	559, 1614
Eco24I	GRGCYC	2 cut(s)	721, 1413
Eco32I	GATATC	1 cut(s)	1441
Eco47I	GGWCC	9 cut(s)	54, 311, 551, 584, 623, 674, 987, 1095, 1973
Eco53kI	GAGCTC	1 cut(s)	1411
Eco81I	CCTNAGG	1 cut(s)	81
Eco88I	CYCGRG	3 cut(s)	593, 1412, 1858
EcoICRI	GAGCTC	1 cut(s)	1411
EcoNI	CCTNNNNNAGG	1 cut(s)	1493
EcoO109I	RGGNCCY	2 cut(s)	623, 674
EcoRV	GATATC	1 cut(s)	1441
EcoT14I	CCWWGG	6 cut(s)	255, 307, 554, 844, 1976, 2005
EcoT38I	GRGCYC	2 cut(s)	721, 1413
ErhI	CCWWGG	6 cut(s)	255, 307, 554, 844, 1976, 2005
Esp3I	CGTCTC	1 cut(s)	967
FaeI	CATG	9 cut(s)	259, 311, 604, 637, 1295, 1973, 2009, 2230, 2402
FalI	AAGNNNNNCTT	2 cut(s)	1084, 1116
FaqI	GGGAC	2 cut(s)	687, 773
FatI	CATG	9 cut(s)	255, 307, 600, 633, 1291, 1969, 2005, 2226, 2398
FauI	CCCGC	1 cut(s)	82
FbaI	TGATCA	1 cut(s)	1492
FblI	GTMKAC	1 cut(s)	2517
Fnu4HI	GCNGC	5 cut(s)	6, 98, 279, 2280, 2283
FriOI	GRGCYC	2 cut(s)	721, 1413
Fsp4HI	GCNGC	5 cut(s)	6, 98, 279, 2280, 2283
FspBI	CTAG	5 cut(s)	555, 1406, 1898, 2090, 2286
GluI	GCNGC	5 cut(s)	6, 98, 279, 2280, 2283
GsuI	CTGGAG	2 cut(s)	1657, 2408
HapII	CCGG	4 cut(s)	594, 611, 734, 1884
HgaI	GACGC	2 cut(s)	41, 2285
Hin1I	GRCGYC	1 cut(s)	33
Hin1II	CATG	9 cut(s)	259, 311, 604, 637, 1295, 1973, 2009, 2230, 2402
HindIII	AAGCTT	1 cut(s)	489
HpaII	CCGG	4 cut(s)	594, 611, 734, 1884
HphI	GGTGA	3 cut(s)	138, 1241, 1553
Hpy166II	GTNNAC	7 cut(s)	900, 987, 1150, 1248, 1919, 2030, 2518
Hpy188I	TCNGA	9 cut(s)	355, 1318, 1336, 1747, 1890, 1912, 2259, 2318, 2466
Hpy8I	GTNNAC	7 cut(s)	900, 987, 1150, 1248, 1919, 2030, 2518
HpyAV	CCTTC	8 cut(s)	1086, 1426, 1449, 1538, 1604, 2335, 2396, 2461
HpyCH4III	ACNGT	6 cut(s)	150, 946, 1658, 1766, 1833, 2522
HpyCH4IV	ACGT	1 cut(s)	178
HpyF10VI	GCNNNNNNNGC	2 cut(s)	397, 466
HpyF3I	CTNAG	7 cut(s)	81, 354, 1326, 2017, 2219, 2477, 2507
HpySE526I	ACGT	1 cut(s)	178
Hsp92I	GRCGYC	1 cut(s)	33
Hsp92II	CATG	9 cut(s)	259, 311, 604, 637, 1295, 1973, 2009, 2230, 2402
Ksp22I	TGATCA	1 cut(s)	1492
Kzo9I	GATC	6 cut(s)	350, 996, 1269, 1492, 1547, 1649
LguI	GCTCTTC	1 cut(s)	1395
LmnI	GCTCC	5 cut(s)	82, 457, 595, 724, 2470
Lsp1109I	GCAGC	4 cut(s)	109, 265, 2266, 2269
LweI	GCATC	4 cut(s)	166, 1069, 1681, 2080
MaeI	CTAG	5 cut(s)	555, 1406, 1898, 2090, 2286
MaeII	ACGT	1 cut(s)	178
MaeIII	GTNAC	4 cut(s)	150, 1519, 1676, 1925
MalI	GATC	6 cut(s)	352, 998, 1271, 1494, 1549, 1651
MbiI	CCGCTC	1 cut(s)	77
MboI	GATC	6 cut(s)	350, 996, 1269, 1492, 1547, 1649
MflI	RGATCY	2 cut(s)	350, 1547
MhlI	GDGCHC	2 cut(s)	721, 1413
MlyI	GAGTC	5 cut(s)	20, 55, 917, 1787, 2377
MmeI	TCCRAC	4 cut(s)	529, 1868, 1915, 2316
MslI	CAYNNNNRTG	3 cut(s)	533, 1388, 2573
MspA1I	CMGCKG	1 cut(s)	2380
MspCI	CTTAAG	2 cut(s)	565, 2123
MspI	CCGG	4 cut(s)	594, 611, 734, 1884
Mva1269I	GAATGC	1 cut(s)	142
MvnI	CGCG	1 cut(s)	400
MwoI	GCNNNNNNNGC	2 cut(s)	397, 466
NciI	CCSGG	4 cut(s)	594, 595, 611, 734
NcoI	CCATGG	3 cut(s)	255, 307, 2005
NdeII	GATC	6 cut(s)	350, 996, 1269, 1492, 1547, 1649
NheI	GCTAGC	1 cut(s)	2285
NlaIII	CATG	9 cut(s)	259, 311, 604, 637, 1295, 1973, 2009, 2230, 2402
NlaIV	GGNNCC	7 cut(s)	313, 459, 675, 720, 855, 1882, 2472
NmeAIII	GCCGAG	1 cut(s)	34
NmuCI	GTSAC	1 cut(s)	150
NspI	RCATGY	1 cut(s)	2230
NspV	TTCGAA	2 cut(s)	1220, 1240
OliI	CACNNNNGTG	1 cut(s)	2573
PaeR7I	CTCGAG	2 cut(s)	1412, 1858
PceI	AGGCCT	2 cut(s)	559, 1614
PciI	ACATGT	1 cut(s)	2226
PciSI	GCTCTTC	1 cut(s)	1395
PctI	GAATGC	1 cut(s)	142
PfeI	GAWTC	8 cut(s)	484, 1351, 1568, 1825, 1851, 1902, 2166, 2497
PflMI	CCANNNNNTGG	1 cut(s)	308
PfoI	TCCNGGA	1 cut(s)	619
PinAI	ACCGGT	1 cut(s)	1883
PkrI	GCNGC	5 cut(s)	7, 99, 280, 2281, 2284
PleI	GAGTC	5 cut(s)	19, 55, 917, 1786, 2377
PpsI	GAGTC	5 cut(s)	19, 55, 917, 1786, 2377
PpuMI	RGGWCCY	2 cut(s)	623, 674
PscI	ACATGT	1 cut(s)	2226
PsiI	TTATAA	1 cut(s)	770
Psp124BI	GAGCTC	1 cut(s)	1413
Psp5II	RGGWCCY	2 cut(s)	623, 674
PspN4I	GGNNCC	7 cut(s)	313, 459, 675, 720, 855, 1882, 2472
PspPPI	RGGWCCY	2 cut(s)	623, 674
PspXI	VCTCGAGB	1 cut(s)	1412
PstI	CTGCAG	1 cut(s)	933
PstNI	CAGNNNCTG	2 cut(s)	626, 1636
PsuI	RGATCY	2 cut(s)	350, 1547
PvuII	CAGCTG	1 cut(s)	2380
RsaI	GTAC	6 cut(s)	210, 261, 821, 901, 2120, 2246
RsaNI	GTAC	6 cut(s)	209, 260, 820, 900, 2119, 2245
RseI	CAYNNNNRTG	3 cut(s)	533, 1388, 2573
SacI	GAGCTC	1 cut(s)	1413
SapI	GCTCTTC	1 cut(s)	1395
SatI	GCNGC	5 cut(s)	6, 98, 279, 2280, 2283
Sau3AI	GATC	6 cut(s)	350, 996, 1269, 1492, 1547, 1649
SchI	GAGTC	5 cut(s)	20, 55, 917, 1787, 2377
SduI	GDGCHC	2 cut(s)	721, 1413
SfaNI	GCATC	4 cut(s)	166, 1069, 1681, 2080
SfcI	CTRYAG	3 cut(s)	747, 929, 1008
Sfr274I	CTCGAG	2 cut(s)	1412, 1858
SfuI	TTCGAA	2 cut(s)	1220, 1240
SinI	GGWCC	9 cut(s)	54, 311, 551, 584, 623, 674, 987, 1095, 1973
SlaI	CTCGAG	2 cut(s)	1412, 1858
SmaI	CCCGGG	1 cut(s)	595
SmiMI	CAYNNNNRTG	3 cut(s)	533, 1388, 2573
SmlI	CTYRAG	5 cut(s)	565, 1412, 1699, 1858, 2123
SmoI	CTYRAG	5 cut(s)	565, 1412, 1699, 1858, 2123
SseBI	AGGCCT	2 cut(s)	559, 1614
SsiI	CCGC	4 cut(s)	75, 266, 398, 653
SspI	AATATT	1 cut(s)	2429
SspMI	CTAG	5 cut(s)	555, 1406, 1898, 2090, 2286
SstI	GAGCTC	1 cut(s)	1413
StuI	AGGCCT	2 cut(s)	559, 1614
StyI	CCWWGG	6 cut(s)	255, 307, 554, 844, 1976, 2005
TaaI	ACNGT	6 cut(s)	150, 946, 1658, 1766, 1833, 2522
TaiI	ACGT	1 cut(s)	181
TaqI	TCGA	6 cut(s)	1220, 1240, 1395, 1413, 1859, 2350
TatI	WGTACW	2 cut(s)	899, 2244
TfiI	GAWTC	8 cut(s)	484, 1351, 1568, 1825, 1851, 1902, 2166, 2497
TscAI	CASTG	6 cut(s)	369, 933, 1090, 1771, 2040, 2182
TseFI	GTSAC	1 cut(s)	150
TseI	GCWGC	5 cut(s)	5, 97, 278, 2279, 2282
Tsp45I	GTSAC	1 cut(s)	150
TspGWI	ACGGA	3 cut(s)	985, 2528, 2563
TspMI	CCCGGG	1 cut(s)	593
TspRI	CASTG	6 cut(s)	369, 933, 1090, 1771, 2040, 2182
Van91I	CCANNNNNTGG	1 cut(s)	308
Vha464I	CTTAAG	2 cut(s)	565, 2123
VpaK11BI	GGWCC	9 cut(s)	54, 311, 551, 584, 623, 674, 987, 1095, 1973
XagI	CCTNNNNNAGG	1 cut(s)	1493
XapI	RAATTY	4 cut(s)	1138, 1236, 1732, 2345
XbaI	TCTAGA	1 cut(s)	2089
XceI	RCATGY	1 cut(s)	2230
XcmI	CCANNNNNNNNNTGG	1 cut(s)	305
XhoI	CTCGAG	2 cut(s)	1412, 1858
XmaI	CCCGGG	1 cut(s)	593
XmaJI	CCTAGG	1 cut(s)	554
XmiI	GTMKAC	1 cut(s)	2517
XspI	CTAG	5 cut(s)	555, 1406, 1898, 2090, 2286

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.