Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0003434

Physical Location & Seq

Genomic Coordinates Forward (+)

28794232 .. 28796875

Gene Structure 2644 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0256500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGCCTGAAGCTCCAAAAAGCTCTCTGAAACAGAAGAACGAAGAGGCTCTCAAGTTCATCGAGAGTGTCACAGAAAACGCTGATGAGGTCCAGAAGCGTGTTCTGGGTGAAATCCTAGCTGCAAATGCTCATGTTGAGTATCTGCAGCGACACGGCCTCAATGGTCACACTGACCGTGAGACTTTCAAGAAAATCATGCCTGTTATCACCTACGACCACATCCAGCCTGACATCGACCGTATCGCAAATGGCGACACTTCCCAAATCCTCTGCTCAAAACCCATTTCGGAGTTTTTGACAAGCTCTGGGACATCTGGAGGGGAGAGGAAATTGATGCCAACAATTGAAGAAGAGCTGGAGAGGAGGTCACTGCTCTATAGCCTATTGATGCCTGTGATGAGCCAATATGTGCCTGAATTAGAAAAGGGCAAGGGAATGTACTTTTTGTTCATAAAATCTGAGGCCAAAACACCTGGGGGCCTTGTGGCTCGTCCAGTGCTCACTAGCTATTACAAAAGCTCTCATTTCAAGCAAAGGCCTTATGACCCTTACACAAACTACACCAGCCCAAATGAGACCATTCTCTGCCCTGACTCCTACCAAAGCATGTACTCCCAATTGCTCTGTGGCCTTTGCCAGAACAAAGAAGTCCTCCGAGTTGGCGCTGTTTTCGCCTCCGGATTTATCCGAGCCATTCGCTTTCTAGAGAAGCATTGGCCTATTCTATGCAAGGACATAGAATTCGGGACTCTTAACCCCCAAATCACCGACCCATCGGTCCGGGAATCGGTCTTGAAAATCCTCAAACCGGACCCGAAGCTAGCCGGTTTCATTGCCACCGAGTGTGGGAAGAAATCATGGCAAGGGATCATAACAAGGCTGTGGCCTAACACAAAGTATGTGGATGTTATAGTGACTGGCACTATGTCACAGTACATTCCTACTTTGGATTACTACAGCAATGGGCTTCCTCTGGTTTGCACCATGTATGCTTCCTCTGAGTGCTATTTTGGTGTCAATCTCAACCCAATGTGCAAACCCAGTGAGGTTTCTTACACCCTCATTCCCACTATGTGCTACTTCGAGTTCCTCCCTGTTCACAGAAACAATGGGGTCAACTCGGATTCGGTGTCTGTACCCGAATCGCTCAATGAGAAGGAGCAGCAACAGCTGGTGGATCTTGTTGATGTGAAGCTAGGACAAGAATATGAGCTTGTTGTCACAACCTATGCTGGGCTTTACCGCTACAGAGTTGGTGATGTGCTGAGAGTGGCAGGGTTCAAGAACAAGGCTCCGCAATTCAACTTCATCTGCAGGAAAAACGTGGTTCTAAGCATTGATGCAGACAAGACTGATGAGGTTGAGCTCCAAAACGCTGTGAAGAATGCTGTGACCCATTTGGTGCCATTTGATGCATCTGTGGCAGAGTACACTAGCTATGCTGACACTTCAACAGTTCCAGGCCACTATGTGCTTTTCTGGGAGCTTAGCCTAAATGGCTCAACTCCAATCCCACCCTCAGTGTTTGAGGACTGCTGCTTGGCCATTGAGGAGTCACTCAACAGTGTGTACCGACAAGGCAGAGTCTCCGACAAATCAATCGGGCCGCTGGAGATCAAGATTGTTGAGGCTGGGACTTTTGACAAGCTCATGGACTATGCTATAAGCTTGGGAGCTTCTATTAACCAATACAAGACCCCAAGGTGTGTGAAGTTTGCACCCATTGTTGAGCTCTTGAACTTTAGGGTGGTCTCAAACTACTTCAGTCCCAAGTGCCCCAAATGGGCCCCTGGCCACAAGCAATGGTGCAATAACCATGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000932 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005844 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009266 GO:0009408 GO:0009628 GO:0009892 GO:0009987 GO:0010286 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0032991 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050896 GO:0060255 GO:0065007 GO:0071704 GO:0090304 GO:1901360 GO:1901361 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

607

Amino Acids

68.38

Weight (kDa)

6.08

Isoelectric Point (pI)

42.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GH3	PF03321	17 - 325	2.1e-123	GH3 family N-terminal domain
GH3_M	PF23571	352 - 439	1.4e-30	GH3 family central domain
GH3_C	PF23572	455 - 572	8.9e-39	GH3 family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003434)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G21160 AT5G21160 AT5G21160
fragaria_vesca	FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710
malus_domestica	MD00G1106400.v1.1 MD11G1183000.v1.1
prunus_persica	Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1
pyrus_communis	pycom5153684g00350
rosa_chinensis	RchiOBHm_Chr5g0050001
rosa_laevigata	RLG00000034676
rosa_multiflora	Rmu_sc0000333.1_g000023
rosa_roxburghii	Rroxscaffold_1G00031150
rosa_rugosa	Rorug05G0256500
rosa_samantha	Rh5AG329600 Rh5BG340300 Rh5CG366300 Rh5DG352900
rosa_wichuraiana	Rw5G031120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	776
AccB1I	GGYRCC	1 cut(s)	1402
AccIII	TCCGGA	1 cut(s)	677
AciI	CCGC	3 cut(s)	1243, 1295, 1607
AclWI	GGATC	2 cut(s)	875, 1185
AcoI	YGGCCR	2 cut(s)	1542, 1792
AcsI	RAATTY	1 cut(s)	740
AcuI	CTGAAG	2 cut(s)	27, 1747
AdeI	CACNNNGTG	3 cut(s)	843, 1074, 1471
AfaI	GTAC	6 cut(s)	440, 611, 935, 1137, 1430, 1571
AfiI	CCNNNNNNNGG	5 cut(s)	787, 808, 846, 1233, 1783
AgsI	TTSAA	8 cut(s)	187, 347, 529, 796, 1282, 1303, 1452, 1738
AjnI	CCWGG	3 cut(s)	472, 1459, 1789
Alw21I	GWGCWC	3 cut(s)	501, 1368, 1734
Alw26I	GTCTC	4 cut(s)	173, 569, 1591, 1756
AlwI	GGATC	2 cut(s)	875, 1185
Aor13HI	TCCGGA	1 cut(s)	677
ApaI	GGGCCC	1 cut(s)	1789
ApeKI	GCWGC	4 cut(s)	119, 145, 1162, 1536
ApoI	RAATTY	1 cut(s)	740
ArsI	GACNNNNNNTTYG	2 cut(s)	725, 757
AspLEI	GCGC	1 cut(s)	665
AspS9I	GGNCC	7 cut(s)	88, 478, 778, 811, 1604, 1785, 1786
AsuC2I	CCSGG	1 cut(s)	782
AsuHPI	GGTGA	4 cut(s)	119, 199, 757, 1268
AsuNHI	GCTAGC	1 cut(s)	820
AvaII	GGWCC	3 cut(s)	88, 778, 811
BaeGI	GKGCMC	2 cut(s)	1778, 1789
BalI	TGGCCA	2 cut(s)	1544, 1794
BanI	GGYRCC	1 cut(s)	1402
BanII	GRGCYC	3 cut(s)	1368, 1734, 1789
Bbv12I	GWGCWC	3 cut(s)	501, 1368, 1734
BbvI	GCAGC	4 cut(s)	106, 157, 1174, 1523
BccI	CCATC	1 cut(s)	781
BceAI	ACGGC	1 cut(s)	169
BciT130I	CCWGG	3 cut(s)	474, 1461, 1791
BcnI	CCSGG	1 cut(s)	782
BcoDI	GTCTC	4 cut(s)	173, 569, 1591, 1756
BfaI	CTAG	6 cut(s)	116, 504, 704, 821, 1196, 1434
BfmI	CTRYAG	5 cut(s)	143, 376, 955, 1246, 1312
BfoI	RGCGCY	1 cut(s)	666
BglI	GCCNNNNNGGC	1 cut(s)	1497
BisI	GCNGC	5 cut(s)	120, 146, 1163, 1537, 1607
BlpI	GCTNAGC	1 cut(s)	1487
BlsI	GCNGC	5 cut(s)	121, 147, 1164, 1538, 1608
Bme1390I	CCNGG	4 cut(s)	474, 782, 1461, 1791
Bme18I	GGWCC	3 cut(s)	88, 778, 811
BmgT120I	GGNCC	7 cut(s)	88, 478, 778, 811, 1604, 1785, 1786
BmiI	GGNNCC	6 cut(s)	479, 813, 1293, 1404, 1787, 1788
BmrFI	CCNGG	4 cut(s)	474, 782, 1461, 1791
BmrI	ACTGGG	1 cut(s)	1035
BmsI	GCATC	5 cut(s)	324, 378, 1330, 1402, 1424
BmtI	GCTAGC	1 cut(s)	824
BmuI	ACTGGG	1 cut(s)	1035
BpmI	CTGGAG	3 cut(s)	336, 377, 1631
Bpu1102I	GCTNAGC	1 cut(s)	1487
BpuEI	CTTGAG	1 cut(s)	35
BpuMI	CCSGG	1 cut(s)	782
BsaI	GGTCTC	2 cut(s)	569, 1756
BsaJI	CCNNGG	3 cut(s)	473, 1700, 1789
BsaWI	WCCGGW	2 cut(s)	677, 808
BsaXI	ACNNNNNCTCC	2 cut(s)	350, 380
Bsc4I	CCNNNNNNNGG	5 cut(s)	787, 808, 846, 1233, 1783
Bse118I	RCCGGY	1 cut(s)	824
Bse1I	ACTGG	3 cut(s)	494, 922, 1041
Bse3DI	GCAATG	3 cut(s)	831, 967, 1808
BseAI	TCCGGA	1 cut(s)	677
BseBI	CCWGG	3 cut(s)	474, 1461, 1791
BseDI	CCNNGG	3 cut(s)	473, 1700, 1789
BseGI	GGATG	2 cut(s)	219, 910
BseLI	CCNNNNNNNGG	5 cut(s)	787, 808, 846, 1233, 1783
BseMI	GCAATG	3 cut(s)	831, 967, 1808
BseMII	CTCAG	4 cut(s)	450, 990, 1256, 1533
BseNI	ACTGG	3 cut(s)	494, 922, 1041
BseRI	GAGGAG	2 cut(s)	376, 1565
BseSI	GKGCMC	2 cut(s)	1778, 1789
BseXI	GCAGC	4 cut(s)	106, 157, 1174, 1523
BseYI	CCCAGC	2 cut(s)	1232, 1631
Bsh1285I	CGRYCG	1 cut(s)	238
BshNI	GGYRCC	1 cut(s)	1402
BsiEI	CGRYCG	1 cut(s)	238
BsiHKAI	GWGCWC	3 cut(s)	501, 1368, 1734
BsiSI	CCGG	4 cut(s)	678, 781, 809, 825
BslFI	GGGAC	4 cut(s)	322, 760, 1648, 1752
BslI	CCNNNNNNNGG	5 cut(s)	787, 808, 846, 1233, 1783
BsmAI	GTCTC	4 cut(s)	173, 569, 1591, 1756
BsmFI	GGGAC	4 cut(s)	322, 760, 1648, 1752
BsmI	GAATGC	1 cut(s)	1390
Bso31I	GGTCTC	2 cut(s)	569, 1756
Bsp120I	GGGCCC	1 cut(s)	1785
Bsp1286I	GDGCHC	5 cut(s)	501, 1368, 1734, 1778, 1789
Bsp13I	TCCGGA	1 cut(s)	677
Bsp143I	GATC	3 cut(s)	867, 1177, 1614
Bsp1720I	GCTNAGC	1 cut(s)	1487
BspACI	CCGC	3 cut(s)	1243, 1295, 1607
BspCNI	CTCAG	4 cut(s)	451, 991, 1257, 1532
BspEI	TCCGGA	1 cut(s)	677
BspLI	GGNNCC	6 cut(s)	479, 813, 1293, 1404, 1787, 1788
BspMAI	CTGCAG	2 cut(s)	147, 1316
BspOI	GCTAGC	1 cut(s)	824
BspPI	GGATC	2 cut(s)	875, 1185
BspQI	GCTCTTC	1 cut(s)	345
BspT107I	GGYRCC	1 cut(s)	1402
BspTNI	GGTCTC	2 cut(s)	569, 1756
BsrDI	GCAATG	3 cut(s)	831, 967, 1808
BsrFI	RCCGGY	1 cut(s)	824
BsrI	ACTGG	3 cut(s)	494, 922, 1041
BssAI	RCCGGY	1 cut(s)	824
BssECI	CCNNGG	3 cut(s)	473, 1700, 1789
BssMI	GATC	3 cut(s)	867, 1177, 1614
BssT1I	CCWWGG	1 cut(s)	1700
Bst2UI	CCWGG	3 cut(s)	474, 1461, 1791
Bst4CI	ACNGT	5 cut(s)	176, 239, 933, 1456, 1565
Bst6I	CTCTTC	2 cut(s)	36, 345
BstC8I	GCNNGC	1 cut(s)	822
BstDEI	CTNAG	6 cut(s)	459, 999, 1265, 1331, 1487, 1519
BstF5I	GGATG	2 cut(s)	219, 910
BstH2I	RGCGCY	1 cut(s)	666
BstHHI	GCGC	1 cut(s)	665
BstKTI	GATC	3 cut(s)	870, 1180, 1617
BstMAI	GTCTC	4 cut(s)	173, 569, 1591, 1756
BstMBI	GATC	3 cut(s)	867, 1177, 1614
BstMCI	CGRYCG	1 cut(s)	238
BstMWI	GCNNNNNNNGC	5 cut(s)	125, 671, 1168, 1421, 1497
BstNI	CCWGG	3 cut(s)	474, 1461, 1791
BstNSI	RCATGY	1 cut(s)	610
BstSCI	CCNGG	4 cut(s)	472, 780, 1459, 1789
BstSFI	CTRYAG	5 cut(s)	143, 376, 955, 1246, 1312
BstSLI	GKGCMC	2 cut(s)	1778, 1789
BstV1I	GCAGC	4 cut(s)	106, 157, 1174, 1523
BstX2I	RGATCY	1 cut(s)	1177
BstYI	RGATCY	1 cut(s)	1177
BtsCI	GGATG	2 cut(s)	219, 910
BtsI	GCAGTG	1 cut(s)	368
BtsIMutI	CAGTG	6 cut(s)	168, 368, 501, 1048, 1527, 1570
Cac8I	GCNNGC	1 cut(s)	822
CfoI	GCGC	1 cut(s)	665
Cfr10I	RCCGGY	1 cut(s)	824
Cfr13I	GGNCC	7 cut(s)	88, 478, 778, 811, 1604, 1785, 1786
CpoI	CGGWCCG	1 cut(s)	778
Csp6I	GTAC	6 cut(s)	439, 610, 934, 1136, 1429, 1570
CspCI	CAANNNNNGTGG	2 cut(s)	882, 917
CspI	CGGWCCG	1 cut(s)	778
CviAII	CATG	7 cut(s)	131, 196, 607, 858, 985, 1651, 1817
CviQI	GTAC	6 cut(s)	439, 610, 934, 1136, 1429, 1570
DdeI	CTNAG	6 cut(s)	459, 999, 1265, 1331, 1487, 1519
DpnI	GATC	3 cut(s)	869, 1179, 1616
DpnII	GATC	3 cut(s)	867, 1177, 1614
DraIII	CACNNNGTG	3 cut(s)	843, 1074, 1471
DrdI	GACNNNNNNGTC	1 cut(s)	776
DseDI	GACNNNNNNGTC	1 cut(s)	776
EaeI	YGGCCR	2 cut(s)	1542, 1792
Eam1104I	CTCTTC	2 cut(s)	36, 345
EarI	CTCTTC	2 cut(s)	36, 345
Ecl136II	GAGCTC	2 cut(s)	1366, 1732
Eco130I	CCWWGG	1 cut(s)	1700
Eco147I	AGGCCT	1 cut(s)	538
Eco24I	GRGCYC	3 cut(s)	1368, 1734, 1789
Eco31I	GGTCTC	2 cut(s)	569, 1756
Eco47I	GGWCC	3 cut(s)	88, 778, 811
Eco53kI	GAGCTC	2 cut(s)	1366, 1732
Eco57I	CTGAAG	2 cut(s)	27, 1747
EcoICRI	GAGCTC	2 cut(s)	1366, 1732
EcoO109I	RGGNCCY	2 cut(s)	478, 1786
EcoRI	GAATTC	1 cut(s)	740
EcoRII	CCWGG	3 cut(s)	472, 1459, 1789
EcoT14I	CCWWGG	1 cut(s)	1700
EcoT22I	ATGCAT	1 cut(s)	1417
EcoT38I	GRGCYC	3 cut(s)	1368, 1734, 1789
ErhI	CCWWGG	1 cut(s)	1700
FaeI	CATG	7 cut(s)	134, 199, 610, 861, 988, 1654, 1820
FaqI	GGGAC	4 cut(s)	322, 760, 1648, 1752
FatI	CATG	7 cut(s)	130, 195, 606, 857, 984, 1650, 1816
Fnu4HI	GCNGC	5 cut(s)	120, 146, 1163, 1537, 1607
FokI	GGATG	2 cut(s)	206, 917
FriOI	GRGCYC	3 cut(s)	1368, 1734, 1789
Fsp4HI	GCNGC	5 cut(s)	120, 146, 1163, 1537, 1607
FspBI	CTAG	6 cut(s)	116, 504, 704, 821, 1196, 1434
GlaI	GCGC	1 cut(s)	664
GluI	GCNGC	5 cut(s)	120, 146, 1163, 1537, 1607
GsaI	CCCAGC	2 cut(s)	1236, 1635
GsuI	CTGGAG	3 cut(s)	336, 377, 1631
HaeII	RGCGCY	1 cut(s)	666
HapII	CCGG	4 cut(s)	678, 781, 809, 825
HhaI	GCGC	1 cut(s)	665
Hin1II	CATG	7 cut(s)	134, 199, 610, 861, 988, 1654, 1820
Hin6I	GCGC	1 cut(s)	663
HinP1I	GCGC	1 cut(s)	663
HincII	GTYRAC	1 cut(s)	1117
HindII	GTYRAC	1 cut(s)	1117
HindIII	AAGCTT	1 cut(s)	1666
HinfI	GANTC	7 cut(s)	593, 748, 785, 1124, 1142, 1553, 1584
HpaII	CCGG	4 cut(s)	678, 781, 809, 825
HphI	GGTGA	4 cut(s)	119, 199, 757, 1268
Hpy166II	GTNNAC	4 cut(s)	1099, 1117, 1431, 1570
Hpy188I	TCNGA	8 cut(s)	27, 289, 460, 656, 689, 1000, 1123, 1591
Hpy8I	GTNNAC	4 cut(s)	1099, 1117, 1431, 1570
HpyAV	CCTTC	1 cut(s)	1150
HpyCH4III	ACNGT	5 cut(s)	176, 239, 933, 1456, 1565
HpyCH4IV	ACGT	1 cut(s)	1323
HpyF10VI	GCNNNNNNNGC	5 cut(s)	125, 671, 1168, 1421, 1497
HpyF3I	CTNAG	6 cut(s)	459, 999, 1265, 1331, 1487, 1519
HpySE526I	ACGT	1 cut(s)	1323
Hsp92II	CATG	7 cut(s)	134, 199, 610, 861, 988, 1654, 1820
HspAI	GCGC	1 cut(s)	663
Kpn2I	TCCGGA	1 cut(s)	677
Kzo9I	GATC	3 cut(s)	867, 1177, 1614
LguI	GCTCTTC	1 cut(s)	345
LmnI	GCTCC	6 cut(s)	16, 1159, 1297, 1371, 1483, 1673
Lsp1109I	GCAGC	4 cut(s)	106, 157, 1174, 1523
LweI	GCATC	5 cut(s)	324, 378, 1330, 1402, 1424
MaeI	CTAG	6 cut(s)	116, 504, 704, 821, 1196, 1434
MaeII	ACGT	1 cut(s)	1323
MaeIII	GTNAC	8 cut(s)	67, 164, 366, 913, 927, 1219, 1390, 1554
MalI	GATC	3 cut(s)	869, 1179, 1616
MboI	GATC	3 cut(s)	867, 1177, 1614
MboII	GAAGA	6 cut(s)	46, 53, 359, 362, 862, 1393
MfeI	CAATTG	2 cut(s)	342, 617
MflI	RGATCY	1 cut(s)	1177
MhlI	GDGCHC	5 cut(s)	501, 1368, 1734, 1778, 1789
MlsI	TGGCCA	2 cut(s)	1544, 1794
MluCI	AATT	6 cut(s)	329, 342, 416, 617, 740, 1298
MluNI	TGGCCA	2 cut(s)	1544, 1794
MlyI	GAGTC	4 cut(s)	587, 742, 1562, 1593
MmeI	TCCRAC	1 cut(s)	1614
Mox20I	TGGCCA	2 cut(s)	1544, 1794
Mph1103I	ATGCAT	1 cut(s)	1417
MroI	TCCGGA	1 cut(s)	677
MscI	TGGCCA	2 cut(s)	1544, 1794
MseI	TTAA	2 cut(s)	753, 1683
Msp20I	TGGCCA	2 cut(s)	1544, 1794
MspA1I	CMGCKG	2 cut(s)	1171, 1609
MspI	CCGG	4 cut(s)	678, 781, 809, 825
MspR9I	CCNGG	4 cut(s)	474, 782, 1461, 1791
MunI	CAATTG	2 cut(s)	342, 617
Mva1269I	GAATGC	1 cut(s)	1390
MvaI	CCWGG	3 cut(s)	474, 1461, 1791
MwoI	GCNNNNNNNGC	5 cut(s)	125, 671, 1168, 1421, 1497
NciI	CCSGG	1 cut(s)	782
NdeII	GATC	3 cut(s)	867, 1177, 1614
NheI	GCTAGC	1 cut(s)	820
NlaIII	CATG	7 cut(s)	134, 199, 610, 861, 988, 1654, 1820
NlaIV	GGNNCC	6 cut(s)	479, 813, 1293, 1404, 1787, 1788
NmuCI	GTSAC	8 cut(s)	67, 164, 366, 913, 927, 1219, 1390, 1554
NsiI	ATGCAT	1 cut(s)	1417
NspI	RCATGY	1 cut(s)	610
PceI	AGGCCT	1 cut(s)	538
PciSI	GCTCTTC	1 cut(s)	345
PcsI	WCGNNNNNNNCGW	1 cut(s)	249
PctI	GAATGC	1 cut(s)	1390
PfeI	GAWTC	3 cut(s)	785, 1124, 1142
PfoI	TCCNGGA	1 cut(s)	780
PkrI	GCNGC	5 cut(s)	121, 147, 1164, 1538, 1608
PleI	GAGTC	4 cut(s)	587, 742, 1561, 1592
PpsI	GAGTC	4 cut(s)	587, 742, 1561, 1592
Psp124BI	GAGCTC	2 cut(s)	1368, 1734
Psp6I	CCWGG	3 cut(s)	472, 1459, 1789
PspFI	CCCAGC	2 cut(s)	1232, 1631
PspGI	CCWGG	3 cut(s)	472, 1459, 1789
PspN4I	GGNNCC	6 cut(s)	479, 813, 1293, 1404, 1787, 1788
PspOMI	GGGCCC	1 cut(s)	1785
PspPI	GGNCC	7 cut(s)	88, 478, 778, 811, 1604, 1785, 1786
PsrI	GAACNNNNNNTAC	2 cut(s)	431, 463
PstI	CTGCAG	2 cut(s)	147, 1316
PsuI	RGATCY	1 cut(s)	1177
PvuII	CAGCTG	1 cut(s)	1171
RsaI	GTAC	6 cut(s)	440, 611, 935, 1137, 1430, 1571
RsaNI	GTAC	6 cut(s)	439, 610, 934, 1136, 1429, 1570
Rsr2I	CGGWCCG	1 cut(s)	778
RsrII	CGGWCCG	1 cut(s)	778
SacI	GAGCTC	2 cut(s)	1368, 1734
SapI	GCTCTTC	1 cut(s)	345
SaqAI	TTAA	2 cut(s)	753, 1683
SatI	GCNGC	5 cut(s)	120, 146, 1163, 1537, 1607
Sau3AI	GATC	3 cut(s)	867, 1177, 1614
Sau96I	GGNCC	7 cut(s)	88, 478, 778, 811, 1604, 1785, 1786
SchI	GAGTC	4 cut(s)	587, 742, 1562, 1593
ScrFI	CCNGG	4 cut(s)	474, 782, 1461, 1791
SduI	GDGCHC	5 cut(s)	501, 1368, 1734, 1778, 1789
SfaNI	GCATC	5 cut(s)	324, 378, 1330, 1402, 1424
SfcI	CTRYAG	5 cut(s)	143, 376, 955, 1246, 1312
SinI	GGWCC	3 cut(s)	88, 778, 811
SmlI	CTYRAG	1 cut(s)	50
SmoI	CTYRAG	1 cut(s)	50
Sse9I	AATT	6 cut(s)	329, 342, 416, 617, 740, 1298
SseBI	AGGCCT	1 cut(s)	538
SsiI	CCGC	3 cut(s)	1243, 1295, 1607
SspMI	CTAG	6 cut(s)	116, 504, 704, 821, 1196, 1434
SstI	GAGCTC	2 cut(s)	1368, 1734
StuI	AGGCCT	1 cut(s)	538
StyD4I	CCNGG	4 cut(s)	472, 780, 1459, 1789
StyI	CCWWGG	1 cut(s)	1700
TaaI	ACNGT	5 cut(s)	176, 239, 933, 1456, 1565
TaiI	ACGT	1 cut(s)	1326
TaqI	TCGA	3 cut(s)	60, 234, 1083
TaqII	GACCGA	2 cut(s)	766, 778
TasI	AATT	6 cut(s)	329, 342, 416, 617, 740, 1298
TatI	WGTACW	4 cut(s)	438, 609, 933, 1428
TauI	GCSGC	1 cut(s)	1609
TfiI	GAWTC	3 cut(s)	785, 1124, 1142
Tru1I	TTAA	2 cut(s)	753, 1683
Tru9I	TTAA	2 cut(s)	753, 1683
TscAI	CASTG	6 cut(s)	175, 375, 501, 1048, 1527, 1570
TseFI	GTSAC	8 cut(s)	67, 164, 366, 913, 927, 1219, 1390, 1554
TseI	GCWGC	4 cut(s)	119, 145, 1162, 1536
Tsp45I	GTSAC	8 cut(s)	67, 164, 366, 913, 927, 1219, 1390, 1554
TspDTI	ATGAA	4 cut(s)	46, 439, 820, 1297
TspRI	CASTG	6 cut(s)	175, 375, 501, 1048, 1527, 1570
VpaK11BI	GGWCC	3 cut(s)	88, 778, 811
XapI	RAATTY	1 cut(s)	740
XbaI	TCTAGA	1 cut(s)	703
XceI	RCATGY	1 cut(s)	610
XcmI	CCANNNNNNNNNTGG	1 cut(s)	623
XspI	CTAG	6 cut(s)	116, 504, 704, 821, 1196, 1434
Zsp2I	ATGCAT	1 cut(s)	1417

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.