Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0003434

Physical Location & Seq

Genomic Coordinates Reverse (-)

44561959 .. 44570688

Gene Structure 8730 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG366300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2742 bp

ATGGTGATGGCTGAAACTGATGAGCTCAATGTGAATGGTCCCAAATCCCCGTGGAAGACTCCGGTCGCCGCCGAAGAAGCTCCCGTCAATGGCATGGGTGCCGAGTCCTGGCCTGCTCTGGCTGACGCCCAGGCCCAGGCCCAGGCCCATAGGTCCAAGACTCCCGACCTTGCCACTCCTCTGCCTCCTCAGGGATTAATCTCGCAGCAAAAGACGAATCGGCCTGGAAACTCTAACGCTTCGCATAAGCATTCATCGTCACAATATCAAAAGACAGGCCCTAAACGCAATCCAAATGTTGCACCTCCTTTCCCAGTACCCTTACCTTACCATCAACCATCACTTCCACCTGTTTTTCATACTATGGTACATCCGCCACACATTGCTGCTTCTGGTTATGCTTTCCAGCCATACCCTGGACCCATTGCAAATGTTGAAAATCATATAGCAAAATCTGGATCTGAGACCCCGGTGCAAGGTTTTGTGCAACCGGTTCAGCCCCAACCACGAGGTAATCCAAATGCTTATGGTGTCAATTTTTCTTCTAGAAGACCCAATATGCAAGAGCCTGGTGGGCCTGGTGGCCATTGGAATCATGCTTGGTATCAGCAACGACCATTTAATCCCAGAGAGAACATTCCTATGCAACAGGGGGTTGGACCTAGGCCTTTCTTGAGGCCTCCATTTTTTGGTCCAGCTCCAGGGTTCATGGTTGGCCCAACTATTCCAGGACCTGTCCCCATGTGCTATGTTCCAGTTCCGCCGACTGGTGCAATTAGGGGACCTCATCCTCCCCACTTTATGCCACATCCTTTAAATCCAGGGGCTCCATTACTACACCCGGAGACACATCCGGTAGCTTTGAGGGATAATATTATAAAACAAATAGAGTATTATTTTAGTGATGAAAATCTAAAGAATGACAAGTACCTAATTTCATTGATGGATGACCAAGGGTGGGTGCCAGTAACCTCTATTGCTGACTTTAAAAGGGTTAAGAAAATGTGTACAGACATAGCATTTATTCTTGATTCACTGCTGGGTTCAGCTACCTTAGAAGTGCAGGGCAACAAGATACGGAGACGAATTGAGTGGTCAAAGTGGATTGCAACTTCTACAGACTCTACATCAAAACCGGCCCAACTTGAACAGAGGTCTATCAATGTTTTAGAGAATAGTGATGCCAGTGGTGATGGAAGGACCACTTGCGAGGAGAATGTTGAACTTTCATCATGTGAAAAGAATTTGATGGAGGATAAGCCATCAAATACCGAACATGGCCTTGATACTCTTGACATTGATGGTAGATTACCAGAGTTGACTTGTAATAATGGTGATAAGATTCGAAAGTCTACTGCCAAATCAAATTTTAAGTCCTCATATCTTAAAACGAATCATTGCTCGGACTGCCCTGACCAATCCAAGGGAACTGAGCCTTCAGATATGGATATGAAGAATCTTGGTGGTCTGTCAAGTGATTTTGCAAACACATTTATGCTCGACGAAGAGCTAGAGCTTGAGCAGAAAATAATAAAAAAGGATGATCTCTATCCCAGTAGAAGTGACGCTACTATTTTGTGTTCTTGTGGCATTTCCGCCCAAAGGGTTGATGATGAAGATGATGAGATTGTCGTACATGATCAGGATGTCCAGAGACTTGTAATTGTTACCAGGAATTGCAGAGTAGGTGAAGGATCTAAAACTGATGATAAGGAATCAAAAACCATTACCAATGAGCTCGCTTCTGCTATAAATGAAGGCCTTTATTTCTATGAGCAGGAACTGAAAACCAAGCGATCAAACCGTAAAAAGAACAACTCCAGTTACGAAAATAGAGATGCAGGCTCAAGAGTTTCAAATTTGGCCAAAGGATTTTCAAATTTGAAACGTGCTGAAATATCTGGCAGTAACAGTGGCACTGAAGAGTCTATAAGTGCTAATTCCCGAAAGAAGCATAGCAAAAACTTCCAAAATCAACAGTCATCCCATAGACAGCGATTCTTCTCGAGCAACTTTAGAAATTATGGAACCGGTCGGAACTCTCTAGGAATCATATCTGAAAGTCCACCAAGTAACTCAGTTGGATTTTTCTTTAGTTCCACACCACCTGAAAATCATGGTCCAAGATCTTCCAAGTTGAGTATTTCTCCCCATGGGGTTCTGTCAGGGAGCAGTCCGCCAGTGGGTTCTGTGCCAAAGTCATTTCCACCATTTCAGCATCCAAGTCATCAGCTTCTAGAAGAAAATGGTTTCAAACAGCAGAAGTACCTAAAGTATCACAAGCGGTGCCTAAATGACAGGAAGAAGTTGGGAATCGGTTGCAGTGAGGAAATGAATACTTTATATAGATTTTGGTCGTATTTCCTAAGAAACATGTTCAACTGCTCAATGTATGATGAGTTCCGGAAATATGCACTTGAAGACGCTGCTGCTAGCTATCATTATGGACTAGAGTGCCTATTCAGATTCTATAGTTATGGGTTGGAGAAGGAATTTAGAGATGACCTGTATGATGACTTTGAACAGCTGACTCTGGAGTTTTACCATAAAGGAAATCTGTATGGCCTGGAAAAATATTGGGCATTTCATCATTATCGGGAAAAACGGGGTCAGAAGGAGCCTCTTAGAAAAAATCAAGAATTGGATCGATTGCTTAGGGAAGTATACCGTAGCTTGGATGATTTCCGTGCCAAAGAGAGGACTACAACGGCAATCACTACCATGAAAGAGAGGAGTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000932 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005844 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009266 GO:0009408 GO:0009628 GO:0009892 GO:0009987 GO:0010286 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0032991 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050896 GO:0060255 GO:0065007 GO:0071704 GO:0090304 GO:1901360 GO:1901361 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

913

Amino Acids

102.75

Weight (kDa)

8.04

Isoelectric Point (pI)

49.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
La	PF05383	292 - 346	2.7e-22	La domain
LARP1_HEAT	PF21071	740 - 887	1.5e-61	LARP1 HEAT repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003434)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G21160 AT5G21160 AT5G21160
fragaria_vesca	FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710
malus_domestica	MD00G1106400.v1.1 MD11G1183000.v1.1
prunus_persica	Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1
pyrus_communis	pycom5153684g00350
rosa_chinensis	RchiOBHm_Chr5g0050001
rosa_laevigata	RLG00000034676
rosa_multiflora	Rmu_sc0000333.1_g000023
rosa_roxburghii	Rroxscaffold_1G00031150
rosa_rugosa	Rorug05G0256500
rosa_samantha	Rh5AG329600 Rh5BG340300 Rh5CG366300 Rh5DG352900
rosa_wichuraiana	Rw5G031120

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	878
AccB1I	GGYRCC	3 cut(s)	98, 961, 2286
AccB7I	CCANNNNNTGG	2 cut(s)	416, 689
AccI	GTMKAC	2 cut(s)	1352, 2664
AccIII	TCCGGA	1 cut(s)	2403
AciI	CCGC	6 cut(s)	69, 374, 761, 1596, 2177, 2284
AclWI	GGATC	3 cut(s)	466, 1702, 2652
AcoI	YGGCCR	2 cut(s)	583, 1863
AcsI	RAATTY	5 cut(s)	1243, 1366, 1858, 1879, 2492
AcuI	CTGAAG	2 cut(s)	1422, 1941
AcyI	GRCGYC	1 cut(s)	126
AfaI	GTAC	6 cut(s)	318, 369, 929, 1009, 1635, 2267
AflIII	ACRYGT	1 cut(s)	2373
AgeI	ACCGGT	2 cut(s)	490, 2030
Alw21I	GWGCWC	2 cut(s)	27, 1740
Alw26I	GTCTC	4 cut(s)	458, 839, 1075, 1648
AlwI	GGATC	3 cut(s)	466, 1702, 2652
AlwNI	CAGNNNCTG	2 cut(s)	734, 1783
Ama87I	CYCGRG	1 cut(s)	2005
Aor13HI	TCCGGA	1 cut(s)	2403
ApeKI	GCWGC	4 cut(s)	205, 386, 2426, 2429
ApoI	RAATTY	5 cut(s)	1243, 1366, 1858, 1879, 2492
ArsI	GACNNNNNNTTYG	2 cut(s)	1358, 1390
AseI	ATTAAT	1 cut(s)	197
AsiGI	ACCGGT	2 cut(s)	490, 2030
AspA2I	CCTAGG	1 cut(s)	662
AsuC2I	CCSGG	2 cut(s)	470, 842
AsuHPI	GGTGA	4 cut(s)	16, 1202, 1346, 1700
AsuII	TTCGAA	1 cut(s)	1345
AsuNHI	GCTAGC	1 cut(s)	2432
AvaI	CYCGRG	1 cut(s)	2005
AvaII	GGWCC	9 cut(s)	38, 153, 419, 659, 692, 731, 782, 1200, 2120
AvrII	CCTAGG	1 cut(s)	662
AxyI	CCTNAGG	1 cut(s)	189
BalI	TGGCCA	2 cut(s)	585, 1865
BanI	GGYRCC	3 cut(s)	98, 961, 2286
BanII	GRGCYC	3 cut(s)	27, 829, 1740
BarI	GAAGNNNNNNTAC	2 cut(s)	1552, 1584
BauI	CACGAG	1 cut(s)	507
BbsI	GAAGAC	3 cut(s)	62, 556, 2427
Bbv12I	GWGCWC	2 cut(s)	27, 1740
BbvI	GCAGC	4 cut(s)	217, 373, 2413, 2416
BccI	CCATC	7 cut(s)	339, 346, 937, 1187, 1243, 1270, 1295
BceAI	ACGGC	1 cut(s)	2724
BclI	TGATCA	1 cut(s)	1639
BcnI	CCSGG	2 cut(s)	470, 842
BcoDI	GTCTC	4 cut(s)	458, 839, 1075, 1648
BfaI	CTAG	7 cut(s)	546, 663, 1511, 2045, 2237, 2433, 2450
BfmI	CTRYAG	2 cut(s)	1116, 2470
BglI	GCCNNNNNGGC	1 cut(s)	574
BglII	AGATCT	1 cut(s)	2126
BisI	GCNGC	5 cut(s)	69, 206, 387, 2427, 2430
BlnI	CCTAGG	1 cut(s)	662
BlsI	GCNGC	5 cut(s)	70, 207, 388, 2428, 2431
Bme18I	GGWCC	9 cut(s)	38, 153, 419, 659, 692, 731, 782, 1200, 2120
BmeT110I	CYCGRG	1 cut(s)	2005
BmiI	GGNNCC	9 cut(s)	40, 100, 421, 783, 828, 963, 2029, 2288, 2619
BmrI	ACTGGG	2 cut(s)	308, 1548
BmsI	GCATC	3 cut(s)	1171, 1828, 2227
BmtI	GCTAGC	1 cut(s)	2436
BmuI	ACTGGG	2 cut(s)	308, 1548
BoxI	GACNNNNGTC	1 cut(s)	62
BpiI	GAAGAC	3 cut(s)	62, 556, 2427
BplI	GAGNNNNNCTC	2 cut(s)	2131, 2163
BpmI	CTGGAG	3 cut(s)	684, 1804, 2555
Bpu10I	CCTNAGC	1 cut(s)	2654
Bpu14I	TTCGAA	1 cut(s)	1345
BpuEI	CTTGAG	3 cut(s)	694, 1538, 1831
BpuMI	CCSGG	2 cut(s)	470, 842
Bsa29I	ATCGAT	1 cut(s)	2647
BsaBI	GATNNNNATC	2 cut(s)	909, 1548
BsaHI	GRCGYC	1 cut(s)	126
BsaI	GGTCTC	1 cut(s)	458
BsaWI	WCCGGW	5 cut(s)	61, 490, 853, 2030, 2403
Bse118I	RCCGGY	3 cut(s)	490, 1135, 2030
Bse1I	ACTGG	8 cut(s)	314, 755, 772, 965, 1185, 1554, 1821, 2180
Bse21I	CCTNAGG	1 cut(s)	189
Bse3DI	GCAATG	3 cut(s)	381, 423, 1396
Bse8I	GATNNNNATC	2 cut(s)	909, 1548
BseAI	TCCGGA	1 cut(s)	2403
BseCI	ATCGAT	1 cut(s)	2647
BseJI	GATNNNNATC	2 cut(s)	909, 1548
BseMI	GCAATG	3 cut(s)	381, 423, 1396
BseMII	CTCAG	4 cut(s)	203, 453, 1422, 2091
BseNI	ACTGG	8 cut(s)	314, 755, 772, 965, 1185, 1554, 1821, 2180
BseRI	GAGGAG	3 cut(s)	168, 177, 1226
BseXI	GCAGC	4 cut(s)	217, 373, 2413, 2416
BseYI	CCCAGC	1 cut(s)	1039
BsgI	GTGCAG	1 cut(s)	1082
Bsh1285I	CGRYCG	2 cut(s)	66, 2035
BshNI	GGYRCC	3 cut(s)	98, 961, 2286
BshTI	ACCGGT	2 cut(s)	490, 2030
BshVI	ATCGAT	1 cut(s)	2647
BsiEI	CGRYCG	2 cut(s)	66, 2035
BsiHKAI	GWGCWC	2 cut(s)	27, 1740
BsiHKCI	CYCGRG	1 cut(s)	2005
BsiSI	CCGG	8 cut(s)	62, 470, 491, 842, 854, 1136, 2031, 2404
BslFI	GGGAC	3 cut(s)	24, 722, 795
BsmAI	GTCTC	4 cut(s)	458, 839, 1075, 1648
BsmBI	CGTCTC	1 cut(s)	1075
BsmFI	GGGAC	3 cut(s)	24, 722, 795
BsmI	GAATGC	1 cut(s)	250
Bso31I	GGTCTC	1 cut(s)	458
BsoBI	CYCGRG	1 cut(s)	2005
Bsp119I	TTCGAA	1 cut(s)	1345
Bsp1286I	GDGCHC	3 cut(s)	27, 829, 1740
Bsp13I	TCCGGA	1 cut(s)	2403
Bsp1407I	TGTACA	1 cut(s)	1007
Bsp143I	GATC	7 cut(s)	458, 1543, 1639, 1694, 1796, 2126, 2644
Bsp19I	CCATGG	1 cut(s)	2152
BspACI	CCGC	6 cut(s)	69, 374, 761, 1596, 2177, 2284
BspCNI	CTCAG	4 cut(s)	202, 454, 1423, 2090
BspDI	ATCGAT	1 cut(s)	2647
BspEI	TCCGGA	1 cut(s)	2403
BspLI	GGNNCC	9 cut(s)	40, 100, 421, 783, 828, 963, 2029, 2288, 2619
BspOI	GCTAGC	1 cut(s)	2436
BspPI	GGATC	3 cut(s)	466, 1702, 2652
BspQI	GCTCTTC	1 cut(s)	1500
BspT104I	TTCGAA	1 cut(s)	1345
BspT107I	GGYRCC	3 cut(s)	98, 961, 2286
BspTNI	GGTCTC	1 cut(s)	458
BsrDI	GCAATG	3 cut(s)	381, 423, 1396
BsrFI	RCCGGY	3 cut(s)	490, 1135, 2030
BsrGI	TGTACA	1 cut(s)	1007
BsrI	ACTGG	8 cut(s)	314, 755, 772, 965, 1185, 1554, 1821, 2180
BssAI	RCCGGY	3 cut(s)	490, 1135, 2030
BssMI	GATC	7 cut(s)	458, 1543, 1639, 1694, 1796, 2126, 2644
BssNAI	GTATAC	1 cut(s)	2665
BssNI	GRCGYC	1 cut(s)	126
BssSI	CACGAG	1 cut(s)	507
BssT1I	CCWWGG	4 cut(s)	662, 952, 1422, 2152
Bst1107I	GTATAC	1 cut(s)	2665
Bst2BI	CACGAG	1 cut(s)	507
Bst4CI	ACNGT	4 cut(s)	1805, 1913, 1980, 2669
Bst6I	CTCTTC	2 cut(s)	1500, 1917
BstACI	GRCGYC	1 cut(s)	126
BstAUI	TGTACA	1 cut(s)	1007
BstBI	TTCGAA	1 cut(s)	1345
BstC8I	GCNNGC	4 cut(s)	114, 1740, 1843, 2434
BstDEI	CTNAG	8 cut(s)	189, 462, 1054, 1431, 2077, 2366, 2624, 2654
BstDSI	CCRYGG	2 cut(s)	50, 2152
BstKTI	GATC	7 cut(s)	461, 1546, 1642, 1697, 1799, 2129, 2647
BstMAI	GTCTC	4 cut(s)	458, 839, 1075, 1648
BstMBI	GATC	7 cut(s)	458, 1543, 1639, 1694, 1796, 2126, 2644
BstMCI	CGRYCG	2 cut(s)	66, 2035
BstMWI	GCNNNNNNNGC	4 cut(s)	77, 285, 574, 1407
BstNSI	RCATGY	1 cut(s)	2377
BstPAI	GACNNNNGTC	1 cut(s)	62
BstSFI	CTRYAG	2 cut(s)	1116, 2470
BstV1I	GCAGC	4 cut(s)	217, 373, 2413, 2416
BstV2I	GAAGAC	3 cut(s)	62, 556, 2427
BstX2I	RGATCY	3 cut(s)	458, 1694, 2126
BstYI	RGATCY	3 cut(s)	458, 1694, 2126
BstZ17I	GTATAC	1 cut(s)	2665
Bsu15I	ATCGAT	1 cut(s)	2647
Bsu36I	CCTNAGG	1 cut(s)	189
BsuTUI	ATCGAT	1 cut(s)	2647
BtgI	CCRYGG	2 cut(s)	50, 2152
BtsI	GCAGTG	2 cut(s)	1034, 2329
BtsIMutI	CAGTG	6 cut(s)	1034, 1192, 1917, 1918, 2187, 2329
Cac8I	GCNNGC	4 cut(s)	114, 1740, 1843, 2434
CaiI	CAGNNNCTG	2 cut(s)	734, 1783
Cfr10I	RCCGGY	3 cut(s)	490, 1135, 2030
ClaI	ATCGAT	1 cut(s)	2647
CseI	GACGC	3 cut(s)	134, 1574, 2432
Csp6I	GTAC	6 cut(s)	317, 368, 928, 1008, 1634, 2266
CspAI	ACCGGT	2 cut(s)	490, 2030
CviQI	GTAC	6 cut(s)	317, 368, 928, 1008, 1634, 2266
DdeI	CTNAG	8 cut(s)	189, 462, 1054, 1431, 2077, 2366, 2624, 2654
DpnI	GATC	7 cut(s)	460, 1545, 1641, 1696, 1798, 2128, 2646
DpnII	GATC	7 cut(s)	458, 1543, 1639, 1694, 1796, 2126, 2644
DraI	TTTAAA	2 cut(s)	816, 988
EaeI	YGGCCR	2 cut(s)	583, 1863
Eam1104I	CTCTTC	2 cut(s)	1500, 1917
EarI	CTCTTC	2 cut(s)	1500, 1917
EciI	GGCGGA	4 cut(s)	363, 750, 1585, 2166
Ecl136II	GAGCTC	2 cut(s)	25, 1738
Eco130I	CCWWGG	4 cut(s)	662, 952, 1422, 2152
Eco147I	AGGCCT	3 cut(s)	667, 679, 1761
Eco24I	GRGCYC	3 cut(s)	27, 829, 1740
Eco31I	GGTCTC	1 cut(s)	458
Eco47I	GGWCC	9 cut(s)	38, 153, 419, 659, 692, 731, 782, 1200, 2120
Eco53kI	GAGCTC	2 cut(s)	25, 1738
Eco57I	CTGAAG	2 cut(s)	1422, 1941
Eco81I	CCTNAGG	1 cut(s)	189
Eco88I	CYCGRG	1 cut(s)	2005
EcoICRI	GAGCTC	2 cut(s)	25, 1738
EcoO109I	RGGNCCY	3 cut(s)	278, 731, 782
EcoT14I	CCWWGG	4 cut(s)	662, 952, 1422, 2152
EcoT38I	GRGCYC	3 cut(s)	27, 829, 1740
ErhI	CCWWGG	4 cut(s)	662, 952, 1422, 2152
Esp3I	CGTCTC	1 cut(s)	1075
FalI	AAGNNNNNCTT	2 cut(s)	1189, 1221
FaqI	GGGAC	3 cut(s)	24, 722, 795
FbaI	TGATCA	1 cut(s)	1639
FblI	GTMKAC	2 cut(s)	1352, 2664
Fnu4HI	GCNGC	5 cut(s)	69, 206, 387, 2427, 2430
FriOI	GRGCYC	3 cut(s)	27, 829, 1740
Fsp4HI	GCNGC	5 cut(s)	69, 206, 387, 2427, 2430
FspBI	CTAG	7 cut(s)	546, 663, 1511, 2045, 2237, 2433, 2450
GluI	GCNGC	5 cut(s)	69, 206, 387, 2427, 2430
GsaI	CCCAGC	1 cut(s)	1043
GsuI	CTGGAG	3 cut(s)	684, 1804, 2555
HapII	CCGG	8 cut(s)	62, 470, 491, 842, 854, 1136, 2031, 2404
HgaI	GACGC	3 cut(s)	134, 1574, 2432
Hin1I	GRCGYC	1 cut(s)	126
HincII	GTYRAC	1 cut(s)	1320
HindII	GTYRAC	1 cut(s)	1320
HpaII	CCGG	8 cut(s)	62, 470, 491, 842, 854, 1136, 2031, 2404
HphI	GGTGA	4 cut(s)	16, 1202, 1346, 1700
Hpy166II	GTNNAC	5 cut(s)	1008, 1320, 1353, 2066, 2665
Hpy188I	TCNGA	7 cut(s)	463, 1405, 1441, 2037, 2059, 2465, 2613
Hpy8I	GTNNAC	5 cut(s)	1008, 1320, 1353, 2066, 2665
Hpy99I	CGWCG	1 cut(s)	1505
HpyAV	CCTTC	6 cut(s)	1191, 1446, 1685, 1751, 2482, 2608
HpyCH4III	ACNGT	4 cut(s)	1805, 1913, 1980, 2669
HpyCH4IV	ACGT	1 cut(s)	1888
HpyF10VI	GCNNNNNNNGC	4 cut(s)	77, 285, 574, 1407
HpyF3I	CTNAG	8 cut(s)	189, 462, 1054, 1431, 2077, 2366, 2624, 2654
HpySE526I	ACGT	1 cut(s)	1888
Hsp92I	GRCGYC	1 cut(s)	126
Kpn2I	TCCGGA	1 cut(s)	2403
Ksp22I	TGATCA	1 cut(s)	1639
Kzo9I	GATC	7 cut(s)	458, 1543, 1639, 1694, 1796, 2126, 2644
LguI	GCTCTTC	1 cut(s)	1500
LmnI	GCTCC	5 cut(s)	85, 703, 832, 2169, 2617
Lsp1109I	GCAGC	4 cut(s)	217, 373, 2413, 2416
LweI	GCATC	3 cut(s)	1171, 1828, 2227
MaeI	CTAG	7 cut(s)	546, 663, 1511, 2045, 2237, 2433, 2450
MaeII	ACGT	1 cut(s)	1888
MaeIII	GTNAC	7 cut(s)	258, 967, 1562, 1666, 1823, 1907, 2072
MalI	GATC	7 cut(s)	460, 1545, 1641, 1696, 1798, 2128, 2646
MboI	GATC	7 cut(s)	458, 1543, 1639, 1694, 1796, 2126, 2644
MflI	RGATCY	3 cut(s)	458, 1694, 2126
MhlI	GDGCHC	3 cut(s)	27, 829, 1740
MlsI	TGGCCA	2 cut(s)	585, 1865
MluNI	TGGCCA	2 cut(s)	585, 1865
MlyI	GAGTC	6 cut(s)	52, 113, 154, 1115, 1934, 2524
MmeI	TCCRAC	4 cut(s)	637, 2015, 2062, 2463
Mox20I	TGGCCA	2 cut(s)	585, 1865
MroI	TCCGGA	1 cut(s)	2403
MscI	TGGCCA	2 cut(s)	585, 1865
MseI	TTAA	7 cut(s)	197, 621, 815, 987, 996, 1371, 1386
MslI	CAYNNNNRTG	3 cut(s)	641, 1493, 2720
Msp20I	TGGCCA	2 cut(s)	585, 1865
MspA1I	CMGCKG	1 cut(s)	2527
MspI	CCGG	8 cut(s)	62, 470, 491, 842, 854, 1136, 2031, 2404
Mva1269I	GAATGC	1 cut(s)	250
MwoI	GCNNNNNNNGC	4 cut(s)	77, 285, 574, 1407
NciI	CCSGG	2 cut(s)	470, 842
NcoI	CCATGG	1 cut(s)	2152
NdeII	GATC	7 cut(s)	458, 1543, 1639, 1694, 1796, 2126, 2644
NheI	GCTAGC	1 cut(s)	2432
NlaIV	GGNNCC	9 cut(s)	40, 100, 421, 783, 828, 963, 2029, 2288, 2619
NmeAIII	GCCGAG	1 cut(s)	127
NmuCI	GTSAC	2 cut(s)	258, 1562
NspI	RCATGY	1 cut(s)	2377
NspV	TTCGAA	1 cut(s)	1345
PaeR7I	CTCGAG	1 cut(s)	2005
PceI	AGGCCT	3 cut(s)	667, 679, 1761
PciI	ACATGT	1 cut(s)	2373
PciSI	GCTCTTC	1 cut(s)	1500
PctI	GAATGC	1 cut(s)	250
PflMI	CCANNNNNTGG	2 cut(s)	416, 689
PfoI	TCCNGGA	1 cut(s)	727
PinAI	ACCGGT	2 cut(s)	490, 2030
PkrI	GCNGC	5 cut(s)	70, 207, 388, 2428, 2431
PleI	GAGTC	6 cut(s)	52, 112, 154, 1115, 1933, 2524
PpsI	GAGTC	6 cut(s)	52, 112, 154, 1115, 1933, 2524
PpuMI	RGGWCCY	2 cut(s)	731, 782
PscI	ACATGT	1 cut(s)	2373
PshAI	GACNNNNGTC	1 cut(s)	62
PshBI	ATTAAT	1 cut(s)	197
PsiI	TTATAA	1 cut(s)	878
Psp124BI	GAGCTC	2 cut(s)	27, 1740
Psp5II	RGGWCCY	2 cut(s)	731, 782
PspFI	CCCAGC	1 cut(s)	1039
PspN4I	GGNNCC	9 cut(s)	40, 100, 421, 783, 828, 963, 2029, 2288, 2619
PspPPI	RGGWCCY	2 cut(s)	731, 782
PsrI	GAACNNNNNNTAC	2 cut(s)	2384, 2416
PstNI	CAGNNNCTG	2 cut(s)	734, 1783
PsuI	RGATCY	3 cut(s)	458, 1694, 2126
PvuII	CAGCTG	1 cut(s)	2527
RsaI	GTAC	6 cut(s)	318, 369, 929, 1009, 1635, 2267
RsaNI	GTAC	6 cut(s)	317, 368, 928, 1008, 1634, 2266
RseI	CAYNNNNRTG	3 cut(s)	641, 1493, 2720
SacI	GAGCTC	2 cut(s)	27, 1740
SapI	GCTCTTC	1 cut(s)	1500
SaqAI	TTAA	7 cut(s)	197, 621, 815, 987, 996, 1371, 1386
SatI	GCNGC	5 cut(s)	69, 206, 387, 2427, 2430
Sau3AI	GATC	7 cut(s)	458, 1543, 1639, 1694, 1796, 2126, 2644
SchI	GAGTC	6 cut(s)	52, 113, 154, 1115, 1934, 2524
SduI	GDGCHC	3 cut(s)	27, 829, 1740
SfaNI	GCATC	3 cut(s)	1171, 1828, 2227
SfcI	CTRYAG	2 cut(s)	1116, 2470
Sfr274I	CTCGAG	1 cut(s)	2005
SfuI	TTCGAA	1 cut(s)	1345
SinI	GGWCC	9 cut(s)	38, 153, 419, 659, 692, 731, 782, 1200, 2120
SlaI	CTCGAG	1 cut(s)	2005
SmiMI	CAYNNNNRTG	3 cut(s)	641, 1493, 2720
SmlI	CTYRAG	4 cut(s)	673, 1517, 1846, 2005
SmoI	CTYRAG	4 cut(s)	673, 1517, 1846, 2005
SseBI	AGGCCT	3 cut(s)	667, 679, 1761
SsiI	CCGC	6 cut(s)	69, 374, 761, 1596, 2177, 2284
SspI	AATATT	2 cut(s)	874, 2576
SspMI	CTAG	7 cut(s)	546, 663, 1511, 2045, 2237, 2433, 2450
SstI	GAGCTC	2 cut(s)	27, 1740
StuI	AGGCCT	3 cut(s)	667, 679, 1761
StyI	CCWWGG	4 cut(s)	662, 952, 1422, 2152
TaaI	ACNGT	4 cut(s)	1805, 1913, 1980, 2669
TaiI	ACGT	1 cut(s)	1891
TaqI	TCGA	4 cut(s)	1345, 1500, 2006, 2647
TatI	WGTACW	1 cut(s)	1007
TauI	GCSGC	1 cut(s)	71
Tru1I	TTAA	7 cut(s)	197, 621, 815, 987, 996, 1371, 1386
Tru9I	TTAA	7 cut(s)	197, 621, 815, 987, 996, 1371, 1386
TscAI	CASTG	6 cut(s)	1041, 1192, 1918, 1924, 2187, 2329
TseFI	GTSAC	2 cut(s)	258, 1562
TseI	GCWGC	4 cut(s)	205, 386, 2426, 2429
Tsp45I	GTSAC	2 cut(s)	258, 1562
TspGWI	ACGGA	2 cut(s)	1093, 2675
TspRI	CASTG	6 cut(s)	1041, 1192, 1918, 1924, 2187, 2329
Van91I	CCANNNNNTGG	2 cut(s)	416, 689
VpaK11BI	GGWCC	9 cut(s)	38, 153, 419, 659, 692, 731, 782, 1200, 2120
VspI	ATTAAT	1 cut(s)	197
XapI	RAATTY	5 cut(s)	1243, 1366, 1858, 1879, 2492
XbaI	TCTAGA	2 cut(s)	545, 2236
XceI	RCATGY	1 cut(s)	2377
XcmI	CCANNNNNNNNNTGG	1 cut(s)	413
XhoI	CTCGAG	1 cut(s)	2005
XmaJI	CCTAGG	1 cut(s)	662
XmiI	GTMKAC	2 cut(s)	1352, 2664
XspI	CTAG	7 cut(s)	546, 663, 1511, 2045, 2237, 2433, 2450

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.