Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0003434

Physical Location & Seq

Genomic Coordinates Reverse (-)

48164176 .. 48173566

Gene Structure 9391 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG340300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2529 bp

ATGTTTGGTTTGGTGAACCAGGGATTAATCTCGCAGCAAAAGACGAATCGGCCTGGAAACTCTAACGCTTCGCACAAGCATTCATCGTCACAATATCAAAAGGCAGGCCCTAAACGCAATCCAAATGTTGCACCTCCTTTCCCAGTACCCTTACCTTACCATCAACCATCACTTCCACCTGTTTTTCATACTATGGTACATCCACCACACATTGCTGCTTCTGGTTATGCTTTCCAGCCATACCCTGGACCCATTGCAAATGTTGAAAATCATATAGCAAAATCTGGATCTGAGACCCCGGTGCAAGGTTTTGTGCAACCGGTTCAGCCCCACCCACGAGGTAATCCAAATGCTTATGGTGTCAATTTTTCTTCTAGAAGACCCAATATGCAAGAGCCTGGTGGGCCTGGTGGCCATTGGAATCATGCTTGGTATCAGCAACGACCATTCAATCCCAGAGAGAACATTCCTATGCAACAGGGGGTTGGACCTAGGCCTTTCTTGAGGCCTCCATTTTTTGGTCCAGCTCCAGGGTTCATGGTTGGCCCAACCATTCCAGGACCTGTCCCCATGTGCTATGTTCCAGTTCCGCCGACTGGTGCAATTAGGGGACCTCATCCTCCCCACTTTATGCCACATCCTTTAAATCCAGGGGCTCCATTACTACACCCGGAGACACATCCGGTGGCTTTGAGGGATAATATTATAAAACAAATAGAGTATTATTTTAGTGATGAAAATCTAAAGAATGACAAGTACCTAATTTCATTGATGGATGACCAAGGGTGGGTGCCAGTAACCACTATTGCTGACTTTAAAAGGGTTAAGAAAATGTGTACAGACATGGCATTTATTCTTGATTCACTGCTGGGTTCAGCTACCGTAGAAGTGCAGGGCAACAAGATACGGAGACGAGTTGAGTGGTCAAAGTGGATTGCAACTTCTACAGACTCTACATCAAAACCGGCCCAACTTGAACAGAGGTCTATCAATGTTTTAGAGAATAGTGATGCCAGTGGTGATGGAAGGACCACTTGCGAGGAGAATGTTGAATTTTCATCATGTGAAAAGAATTTGATGGAGGACAAGCCATCAAATACCGAACATGGCCTTGATACTCTTGACATTGATGGTAGATTACCAGAGTTGACTTGTAATAATGGTGATAAGATTCGAAAGTCTACTGCCAAATCAAATTTTAAGTCCTCATATCTTAAAACGAATCATTGCTCAGACTGCCCTGACCAATCCAAGGGAACTGAGCCTTCAGATATGGATATGAAGAATCTTGGTGGTCTGTCAAGTGATTTTGCAAACACATTTATGCTCGACGAAGAGCTAGAGCTTGAGCAGAAAATAATAAAAAAGGATGATCTCTATCCCAGTAGAAGGGTTGATGATGAAGATGATGAGATTGTCGTCCATGATCAGGATGTCCAGAGACTTGTAATTGTTACCAGGAATTGCAGAGTTGGTGAAGGATCTAAAACTGATGATAAGGAATCAAAAACCATTACCAATGAGCTCGCTTCTGCTATAAACGAAGGCCTTTATTTCTATGAGCAGGAACTGAAAACCAAGCGATCAAACCGTAAAAAGAACAACTCCAGTTACGAAAATAGAGATGCAGGCTCAAGAGTTTCAAATTTGGCCAAAGGATTTTCAAATTTGAAACGTGCTGAAATATCTGGCAGTAACAGTGGCACTGAAGAGTCTATAAGTGCTAATTCCCGAAAGAAGCATAGCAAAAACTTCCAAAATCAACAGTCATCCCATAGACAGCGATTCTTCTCGAGCAACTTTAGAAATTATGGAACCGGTCGGAACTCTCTAGGAATCATATCTGAAAGTCCACCAAGTAACTCAGTTGGATTTTTCTTTAGTTCCACACCACCTGAAAATCATGGTCCAAGATCTTCCAAGTTGAGTATTTCTCCCCATGGGGTTCTCTCAGGGAGCAGTCCGCCAGTGGGTTCTGTGCCAAAGTCATTTCCACCATTTCAGCATCCAAGTCATCAGCTTCTAGAAGAAAATGGTTTCAAACAGCAGAAGTACCTAAAGTATCACAAGCGGTGCCTAAATGACAGGAAGAAGTTGGGAATCGGTTGCAGTGAGGAAATGAATACTTTATATAGATTTTGGTCGTATTTCCTAAGAAACATGTTCAACTGCTCAATGTATGATGAGTTCCGGAAATATGCACTTGAAGACGCTGCTGCTAGCTATCATTATGGACTAGAGTGCCTATTCAGATTCTATAGTTATGGGTTGGAGAAGGAATTTAGAGATGACCTGTATGGTGACTTTGAACAGCTGACTCTGGAGTTTTACCATAAAGGAAATCTGTATGGCCTGGAAAAATATTGGGCATTTCATCATTATCGGGAAAAACGGGGTCAGAAGGAGCCTCTTAGAAAAAATCAAGAATTGGATCGATTGCTTAGGGAAGTATACCGTAGCTTGGATGATTTCCGTGCCAAAGAGAGGACTACAACGGCAATCACTACCATGAAAGAGAGGAGTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000932 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005844 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009266 GO:0009408 GO:0009628 GO:0009892 GO:0009987 GO:0010286 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0032991 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050896 GO:0060255 GO:0065007 GO:0071704 GO:0090304 GO:1901360 GO:1901361 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

842

Amino Acids

95.45

Weight (kDa)

8.69

Isoelectric Point (pI)

49.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
La	PF05383	235 - 289	3.8e-23	La domain
LARP1_HEAT	PF21071	669 - 816	2.8e-61	LARP1 HEAT repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003434)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G21160 AT5G21160 AT5G21160
fragaria_vesca	FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710
malus_domestica	MD00G1106400.v1.1 MD11G1183000.v1.1
prunus_persica	Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1
pyrus_communis	pycom5153684g00350
rosa_chinensis	RchiOBHm_Chr5g0050001
rosa_laevigata	RLG00000034676
rosa_multiflora	Rmu_sc0000333.1_g000023
rosa_roxburghii	Rroxscaffold_1G00031150
rosa_rugosa	Rorug05G0256500
rosa_samantha	Rh5AG329600 Rh5BG340300 Rh5CG366300 Rh5DG352900
rosa_wichuraiana	Rw5G031120

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	707
AccB1I	GGYRCC	2 cut(s)	790, 2073
AccB7I	CCANNNNNTGG	2 cut(s)	245, 518
AccI	GTMKAC	2 cut(s)	1181, 2451
AccIII	TCCGGA	1 cut(s)	2190
AciI	CCGC	3 cut(s)	590, 1964, 2071
AclWI	GGATC	3 cut(s)	295, 1489, 2439
AcoI	YGGCCR	2 cut(s)	412, 1650
AcsI	RAATTY	6 cut(s)	1052, 1072, 1195, 1645, 1666, 2279
AcuI	CTGAAG	2 cut(s)	1251, 1728
AfaI	GTAC	5 cut(s)	147, 198, 758, 838, 2054
AflIII	ACRYGT	1 cut(s)	2160
AgeI	ACCGGT	2 cut(s)	319, 1817
AluBI	AGCT	9 cut(s)	527, 878, 1339, 1345, 1525, 2020, 2223, 2314, 2460
AluI	AGCT	9 cut(s)	527, 878, 1339, 1345, 1525, 2020, 2223, 2314, 2460
Alw21I	GWGCWC	1 cut(s)	1527
Alw26I	GTCTC	4 cut(s)	287, 668, 904, 1435
AlwI	GGATC	3 cut(s)	295, 1489, 2439
AlwNI	CAGNNNCTG	2 cut(s)	563, 1570
Ama87I	CYCGRG	1 cut(s)	1792
Aor13HI	TCCGGA	1 cut(s)	2190
ApeKI	GCWGC	4 cut(s)	34, 215, 2213, 2216
ApoI	RAATTY	6 cut(s)	1052, 1072, 1195, 1645, 1666, 2279
ArsI	GACNNNNNNTTYG	2 cut(s)	1187, 1219
AseI	ATTAAT	1 cut(s)	26
AsiGI	ACCGGT	2 cut(s)	319, 1817
AspA2I	CCTAGG	1 cut(s)	491
AsuC2I	CCSGG	2 cut(s)	299, 671
AsuHPI	GGTGA	5 cut(s)	25, 1031, 1175, 1487, 2312
AsuII	TTCGAA	1 cut(s)	1174
AsuNHI	GCTAGC	1 cut(s)	2219
AvaI	CYCGRG	1 cut(s)	1792
AvaII	GGWCC	7 cut(s)	248, 488, 521, 560, 611, 1029, 1907
AvrII	CCTAGG	1 cut(s)	491
BalI	TGGCCA	2 cut(s)	414, 1652
BanI	GGYRCC	2 cut(s)	790, 2073
BanII	GRGCYC	2 cut(s)	658, 1527
BauI	CACGAG	1 cut(s)	336
BbsI	GAAGAC	2 cut(s)	385, 2214
Bbv12I	GWGCWC	1 cut(s)	1527
BbvI	GCAGC	4 cut(s)	46, 202, 2200, 2203
BccI	CCATC	7 cut(s)	168, 175, 766, 1016, 1072, 1099, 1124
BceAI	ACGGC	1 cut(s)	2511
BclI	TGATCA	1 cut(s)	1426
BcnI	CCSGG	2 cut(s)	299, 671
BcoDI	GTCTC	4 cut(s)	287, 668, 904, 1435
BfaI	CTAG	7 cut(s)	375, 492, 1340, 1832, 2024, 2220, 2237
BfmI	CTRYAG	2 cut(s)	945, 2257
BglI	GCCNNNNNGGC	1 cut(s)	403
BglII	AGATCT	1 cut(s)	1913
BisI	GCNGC	4 cut(s)	35, 216, 2214, 2217
BlnI	CCTAGG	1 cut(s)	491
BlsI	GCNGC	4 cut(s)	36, 217, 2215, 2218
Bme18I	GGWCC	7 cut(s)	248, 488, 521, 560, 611, 1029, 1907
BmeT110I	CYCGRG	1 cut(s)	1792
BmiI	GGNNCC	7 cut(s)	250, 612, 657, 792, 1816, 2075, 2406
BmrI	ACTGGG	2 cut(s)	137, 1377
BmsI	GCATC	3 cut(s)	1000, 1615, 2014
BmtI	GCTAGC	1 cut(s)	2223
BmuI	ACTGGG	2 cut(s)	137, 1377
BpiI	GAAGAC	2 cut(s)	385, 2214
BplI	GAGNNNNNCTC	2 cut(s)	1918, 1950
BpmI	CTGGAG	3 cut(s)	513, 1591, 2342
Bpu10I	CCTNAGC	1 cut(s)	2441
Bpu14I	TTCGAA	1 cut(s)	1174
BpuEI	CTTGAG	3 cut(s)	523, 1367, 1618
BpuMI	CCSGG	2 cut(s)	299, 671
Bsa29I	ATCGAT	1 cut(s)	2434
BsaBI	GATNNNNATC	2 cut(s)	738, 1377
BsaI	GGTCTC	1 cut(s)	287
BsaJI	CCNNGG	9 cut(s)	19, 244, 297, 491, 530, 650, 781, 1251, 1939
BsaWI	WCCGGW	4 cut(s)	319, 682, 1817, 2190
Bse118I	RCCGGY	3 cut(s)	319, 964, 1817
Bse1I	ACTGG	8 cut(s)	143, 584, 601, 794, 1014, 1383, 1608, 1967
Bse3DI	GCAATG	3 cut(s)	210, 252, 1225
Bse8I	GATNNNNATC	2 cut(s)	738, 1377
BseAI	TCCGGA	1 cut(s)	2190
BseCI	ATCGAT	1 cut(s)	2434
BseDI	CCNNGG	9 cut(s)	19, 244, 297, 491, 530, 650, 781, 1251, 1939
BseJI	GATNNNNATC	2 cut(s)	738, 1377
BseMI	GCAATG	3 cut(s)	210, 252, 1225
BseMII	CTCAG	5 cut(s)	282, 1245, 1251, 1878, 1965
BseNI	ACTGG	8 cut(s)	143, 584, 601, 794, 1014, 1383, 1608, 1967
BseRI	GAGGAG	1 cut(s)	1055
BseXI	GCAGC	4 cut(s)	46, 202, 2200, 2203
BseYI	CCCAGC	1 cut(s)	868
BsgI	GTGCAG	1 cut(s)	911
Bsh1285I	CGRYCG	1 cut(s)	1822
BshNI	GGYRCC	2 cut(s)	790, 2073
BshTI	ACCGGT	2 cut(s)	319, 1817
BshVI	ATCGAT	1 cut(s)	2434
BsiEI	CGRYCG	1 cut(s)	1822
BsiHKAI	GWGCWC	1 cut(s)	1527
BsiHKCI	CYCGRG	1 cut(s)	1792
BsiSI	CCGG	7 cut(s)	299, 320, 671, 683, 965, 1818, 2191
BslFI	GGGAC	2 cut(s)	551, 624
BsmAI	GTCTC	4 cut(s)	287, 668, 904, 1435
BsmBI	CGTCTC	1 cut(s)	904
BsmFI	GGGAC	2 cut(s)	551, 624
BsmI	GAATGC	1 cut(s)	79
Bso31I	GGTCTC	1 cut(s)	287
BsoBI	CYCGRG	1 cut(s)	1792
Bsp119I	TTCGAA	1 cut(s)	1174
Bsp1286I	GDGCHC	2 cut(s)	658, 1527
Bsp13I	TCCGGA	1 cut(s)	2190
Bsp1407I	TGTACA	1 cut(s)	836
Bsp143I	GATC	7 cut(s)	287, 1372, 1426, 1481, 1583, 1913, 2431
Bsp19I	CCATGG	1 cut(s)	1939
BspACI	CCGC	3 cut(s)	590, 1964, 2071
BspCNI	CTCAG	5 cut(s)	283, 1244, 1252, 1877, 1964
BspDI	ATCGAT	1 cut(s)	2434
BspEI	TCCGGA	1 cut(s)	2190
BspLI	GGNNCC	7 cut(s)	250, 612, 657, 792, 1816, 2075, 2406
BspOI	GCTAGC	1 cut(s)	2223
BspPI	GGATC	3 cut(s)	295, 1489, 2439
BspQI	GCTCTTC	1 cut(s)	1329
BspT104I	TTCGAA	1 cut(s)	1174
BspT107I	GGYRCC	2 cut(s)	790, 2073
BspTNI	GGTCTC	1 cut(s)	287
BsrDI	GCAATG	3 cut(s)	210, 252, 1225
BsrFI	RCCGGY	3 cut(s)	319, 964, 1817
BsrGI	TGTACA	1 cut(s)	836
BsrI	ACTGG	8 cut(s)	143, 584, 601, 794, 1014, 1383, 1608, 1967
BssAI	RCCGGY	3 cut(s)	319, 964, 1817
BssECI	CCNNGG	9 cut(s)	19, 244, 297, 491, 530, 650, 781, 1251, 1939
BssMI	GATC	7 cut(s)	287, 1372, 1426, 1481, 1583, 1913, 2431
BssNAI	GTATAC	1 cut(s)	2452
BssSI	CACGAG	1 cut(s)	336
BssT1I	CCWWGG	4 cut(s)	491, 781, 1251, 1939
Bst1107I	GTATAC	1 cut(s)	2452
Bst2BI	CACGAG	1 cut(s)	336
Bst4CI	ACNGT	5 cut(s)	883, 1592, 1700, 1767, 2456
Bst6I	CTCTTC	2 cut(s)	1329, 1704
BstAUI	TGTACA	1 cut(s)	836
BstBI	TTCGAA	1 cut(s)	1174
BstC8I	GCNNGC	4 cut(s)	106, 1527, 1630, 2221
BstDEI	CTNAG	8 cut(s)	291, 1231, 1260, 1864, 1951, 2153, 2411, 2441
BstDSI	CCRYGG	1 cut(s)	1939
BstKTI	GATC	7 cut(s)	290, 1375, 1429, 1484, 1586, 1916, 2434
BstMAI	GTCTC	4 cut(s)	287, 668, 904, 1435
BstMBI	GATC	7 cut(s)	287, 1372, 1426, 1481, 1583, 1913, 2431
BstMCI	CGRYCG	1 cut(s)	1822
BstMWI	GCNNNNNNNGC	3 cut(s)	114, 403, 1236
BstNSI	RCATGY	1 cut(s)	2164
BstSFI	CTRYAG	2 cut(s)	945, 2257
BstV1I	GCAGC	4 cut(s)	46, 202, 2200, 2203
BstV2I	GAAGAC	2 cut(s)	385, 2214
BstX2I	RGATCY	3 cut(s)	287, 1481, 1913
BstYI	RGATCY	3 cut(s)	287, 1481, 1913
BstZ17I	GTATAC	1 cut(s)	2452
Bsu15I	ATCGAT	1 cut(s)	2434
BsuTUI	ATCGAT	1 cut(s)	2434
BtgI	CCRYGG	1 cut(s)	1939
BtsI	GCAGTG	2 cut(s)	863, 2116
BtsIMutI	CAGTG	6 cut(s)	863, 1021, 1704, 1705, 1974, 2116
Cac8I	GCNNGC	4 cut(s)	106, 1527, 1630, 2221
CaiI	CAGNNNCTG	2 cut(s)	563, 1570
Cfr10I	RCCGGY	3 cut(s)	319, 964, 1817
ClaI	ATCGAT	1 cut(s)	2434
CseI	GACGC	1 cut(s)	2219
Csp6I	GTAC	5 cut(s)	146, 197, 757, 837, 2053
CspAI	ACCGGT	2 cut(s)	319, 1817
CviQI	GTAC	5 cut(s)	146, 197, 757, 837, 2053
DdeI	CTNAG	8 cut(s)	291, 1231, 1260, 1864, 1951, 2153, 2411, 2441
DpnI	GATC	7 cut(s)	289, 1374, 1428, 1483, 1585, 1915, 2433
DpnII	GATC	7 cut(s)	287, 1372, 1426, 1481, 1583, 1913, 2431
DraI	TTTAAA	2 cut(s)	645, 817
EaeI	YGGCCR	2 cut(s)	412, 1650
Eam1104I	CTCTTC	2 cut(s)	1329, 1704
EarI	CTCTTC	2 cut(s)	1329, 1704
EciI	GGCGGA	2 cut(s)	579, 1953
Ecl136II	GAGCTC	1 cut(s)	1525
Eco130I	CCWWGG	4 cut(s)	491, 781, 1251, 1939
Eco147I	AGGCCT	3 cut(s)	496, 508, 1548
Eco24I	GRGCYC	2 cut(s)	658, 1527
Eco31I	GGTCTC	1 cut(s)	287
Eco47I	GGWCC	7 cut(s)	248, 488, 521, 560, 611, 1029, 1907
Eco53kI	GAGCTC	1 cut(s)	1525
Eco57I	CTGAAG	2 cut(s)	1251, 1728
Eco88I	CYCGRG	1 cut(s)	1792
EcoICRI	GAGCTC	1 cut(s)	1525
EcoO109I	RGGNCCY	3 cut(s)	107, 560, 611
EcoT14I	CCWWGG	4 cut(s)	491, 781, 1251, 1939
EcoT38I	GRGCYC	2 cut(s)	658, 1527
ErhI	CCWWGG	4 cut(s)	491, 781, 1251, 1939
Esp3I	CGTCTC	1 cut(s)	904
FalI	AAGNNNNNCTT	2 cut(s)	1018, 1050
FaqI	GGGAC	2 cut(s)	551, 624
FbaI	TGATCA	1 cut(s)	1426
FblI	GTMKAC	2 cut(s)	1181, 2451
Fnu4HI	GCNGC	4 cut(s)	35, 216, 2214, 2217
FriOI	GRGCYC	2 cut(s)	658, 1527
Fsp4HI	GCNGC	4 cut(s)	35, 216, 2214, 2217
FspBI	CTAG	7 cut(s)	375, 492, 1340, 1832, 2024, 2220, 2237
GluI	GCNGC	4 cut(s)	35, 216, 2214, 2217
GsaI	CCCAGC	1 cut(s)	872
GsuI	CTGGAG	3 cut(s)	513, 1591, 2342
HapII	CCGG	7 cut(s)	299, 320, 671, 683, 965, 1818, 2191
HgaI	GACGC	1 cut(s)	2219
HincII	GTYRAC	1 cut(s)	1149
HindII	GTYRAC	1 cut(s)	1149
HpaII	CCGG	7 cut(s)	299, 320, 671, 683, 965, 1818, 2191
HphI	GGTGA	5 cut(s)	25, 1031, 1175, 1487, 2312
Hpy166II	GTNNAC	6 cut(s)	16, 837, 1149, 1182, 1853, 2452
Hpy188I	TCNGA	7 cut(s)	292, 1234, 1270, 1824, 1846, 2252, 2400
Hpy8I	GTNNAC	6 cut(s)	16, 837, 1149, 1182, 1853, 2452
Hpy99I	CGWCG	1 cut(s)	1334
HpyAV	CCTTC	7 cut(s)	1020, 1275, 1383, 1472, 1538, 2269, 2395
HpyCH4III	ACNGT	5 cut(s)	883, 1592, 1700, 1767, 2456
HpyCH4IV	ACGT	1 cut(s)	1675
HpyF10VI	GCNNNNNNNGC	3 cut(s)	114, 403, 1236
HpyF3I	CTNAG	8 cut(s)	291, 1231, 1260, 1864, 1951, 2153, 2411, 2441
HpySE526I	ACGT	1 cut(s)	1675
Kpn2I	TCCGGA	1 cut(s)	2190
Ksp22I	TGATCA	1 cut(s)	1426
Kzo9I	GATC	7 cut(s)	287, 1372, 1426, 1481, 1583, 1913, 2431
LguI	GCTCTTC	1 cut(s)	1329
LmnI	GCTCC	4 cut(s)	532, 661, 1956, 2404
Lsp1109I	GCAGC	4 cut(s)	46, 202, 2200, 2203
LweI	GCATC	3 cut(s)	1000, 1615, 2014
MaeI	CTAG	7 cut(s)	375, 492, 1340, 1832, 2024, 2220, 2237
MaeII	ACGT	1 cut(s)	1675
MaeIII	GTNAC	7 cut(s)	87, 796, 1453, 1610, 1694, 1859, 2300
MalI	GATC	7 cut(s)	289, 1374, 1428, 1483, 1585, 1915, 2433
MboI	GATC	7 cut(s)	287, 1372, 1426, 1481, 1583, 1913, 2431
MflI	RGATCY	3 cut(s)	287, 1481, 1913
MhlI	GDGCHC	2 cut(s)	658, 1527
MlsI	TGGCCA	2 cut(s)	414, 1652
MluNI	TGGCCA	2 cut(s)	414, 1652
MlyI	GAGTC	3 cut(s)	944, 1721, 2311
MmeI	TCCRAC	4 cut(s)	466, 1802, 1849, 2250
Mox20I	TGGCCA	2 cut(s)	414, 1652
MroI	TCCGGA	1 cut(s)	2190
MscI	TGGCCA	2 cut(s)	414, 1652
MseI	TTAA	6 cut(s)	26, 644, 816, 825, 1200, 1215
MslI	CAYNNNNRTG	3 cut(s)	470, 1322, 2507
Msp20I	TGGCCA	2 cut(s)	414, 1652
MspA1I	CMGCKG	1 cut(s)	2314
MspI	CCGG	7 cut(s)	299, 320, 671, 683, 965, 1818, 2191
Mva1269I	GAATGC	1 cut(s)	79
MwoI	GCNNNNNNNGC	3 cut(s)	114, 403, 1236
NciI	CCSGG	2 cut(s)	299, 671
NcoI	CCATGG	1 cut(s)	1939
NdeII	GATC	7 cut(s)	287, 1372, 1426, 1481, 1583, 1913, 2431
NheI	GCTAGC	1 cut(s)	2219
NlaIV	GGNNCC	7 cut(s)	250, 612, 657, 792, 1816, 2075, 2406
NmuCI	GTSAC	2 cut(s)	87, 2300
NspI	RCATGY	1 cut(s)	2164
NspV	TTCGAA	1 cut(s)	1174
PaeR7I	CTCGAG	1 cut(s)	1792
PceI	AGGCCT	3 cut(s)	496, 508, 1548
PciI	ACATGT	1 cut(s)	2160
PciSI	GCTCTTC	1 cut(s)	1329
PctI	GAATGC	1 cut(s)	79
PflMI	CCANNNNNTGG	2 cut(s)	245, 518
PfoI	TCCNGGA	1 cut(s)	556
PinAI	ACCGGT	2 cut(s)	319, 1817
PkrI	GCNGC	4 cut(s)	36, 217, 2215, 2218
PleI	GAGTC	3 cut(s)	944, 1720, 2311
PpsI	GAGTC	3 cut(s)	944, 1720, 2311
PpuMI	RGGWCCY	2 cut(s)	560, 611
PscI	ACATGT	1 cut(s)	2160
PshBI	ATTAAT	1 cut(s)	26
PsiI	TTATAA	1 cut(s)	707
Psp124BI	GAGCTC	1 cut(s)	1527
Psp5II	RGGWCCY	2 cut(s)	560, 611
PspFI	CCCAGC	1 cut(s)	868
PspN4I	GGNNCC	7 cut(s)	250, 612, 657, 792, 1816, 2075, 2406
PspPPI	RGGWCCY	2 cut(s)	560, 611
PsrI	GAACNNNNNNTAC	2 cut(s)	2171, 2203
PstNI	CAGNNNCTG	2 cut(s)	563, 1570
PsuI	RGATCY	3 cut(s)	287, 1481, 1913
PvuII	CAGCTG	1 cut(s)	2314
RsaI	GTAC	5 cut(s)	147, 198, 758, 838, 2054
RsaNI	GTAC	5 cut(s)	146, 197, 757, 837, 2053
RseI	CAYNNNNRTG	3 cut(s)	470, 1322, 2507
SacI	GAGCTC	1 cut(s)	1527
SapI	GCTCTTC	1 cut(s)	1329
SaqAI	TTAA	6 cut(s)	26, 644, 816, 825, 1200, 1215
SatI	GCNGC	4 cut(s)	35, 216, 2214, 2217
Sau3AI	GATC	7 cut(s)	287, 1372, 1426, 1481, 1583, 1913, 2431
SchI	GAGTC	3 cut(s)	944, 1721, 2311
SduI	GDGCHC	2 cut(s)	658, 1527
SfaNI	GCATC	3 cut(s)	1000, 1615, 2014
SfcI	CTRYAG	2 cut(s)	945, 2257
Sfr274I	CTCGAG	1 cut(s)	1792
SfuI	TTCGAA	1 cut(s)	1174
SinI	GGWCC	7 cut(s)	248, 488, 521, 560, 611, 1029, 1907
SlaI	CTCGAG	1 cut(s)	1792
SmiMI	CAYNNNNRTG	3 cut(s)	470, 1322, 2507
SmlI	CTYRAG	4 cut(s)	502, 1346, 1633, 1792
SmoI	CTYRAG	4 cut(s)	502, 1346, 1633, 1792
SseBI	AGGCCT	3 cut(s)	496, 508, 1548
SsiI	CCGC	3 cut(s)	590, 1964, 2071
SspI	AATATT	2 cut(s)	703, 2363
SspMI	CTAG	7 cut(s)	375, 492, 1340, 1832, 2024, 2220, 2237
SstI	GAGCTC	1 cut(s)	1527
StuI	AGGCCT	3 cut(s)	496, 508, 1548
StyI	CCWWGG	4 cut(s)	491, 781, 1251, 1939
TaaI	ACNGT	5 cut(s)	883, 1592, 1700, 1767, 2456
TaiI	ACGT	1 cut(s)	1678
TaqI	TCGA	4 cut(s)	1174, 1329, 1793, 2434
TatI	WGTACW	1 cut(s)	836
Tru1I	TTAA	6 cut(s)	26, 644, 816, 825, 1200, 1215
Tru9I	TTAA	6 cut(s)	26, 644, 816, 825, 1200, 1215
TscAI	CASTG	6 cut(s)	870, 1021, 1705, 1711, 1974, 2116
TseFI	GTSAC	2 cut(s)	87, 2300
TseI	GCWGC	4 cut(s)	34, 215, 2213, 2216
Tsp45I	GTSAC	2 cut(s)	87, 2300
TspGWI	ACGGA	2 cut(s)	922, 2462
TspRI	CASTG	6 cut(s)	870, 1021, 1705, 1711, 1974, 2116
Van91I	CCANNNNNTGG	2 cut(s)	245, 518
VpaK11BI	GGWCC	7 cut(s)	248, 488, 521, 560, 611, 1029, 1907
VspI	ATTAAT	1 cut(s)	26
XapI	RAATTY	6 cut(s)	1052, 1072, 1195, 1645, 1666, 2279
XbaI	TCTAGA	2 cut(s)	374, 2023
XceI	RCATGY	1 cut(s)	2164
XcmI	CCANNNNNNNNNTGG	1 cut(s)	242
XhoI	CTCGAG	1 cut(s)	1792
XmaJI	CCTAGG	1 cut(s)	491
XmiI	GTMKAC	2 cut(s)	1181, 2451
XspI	CTAG	7 cut(s)	375, 492, 1340, 1832, 2024, 2220, 2237

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.