Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0003434

Physical Location & Seq

Genomic Coordinates Reverse (-)

50292369 .. 50300912

Gene Structure 8544 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG329600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2691 bp

ATGGTGATGGCTGAAACTGATGAGCTCAATGTGAATGGTCCCAAATCCCCGTGGAAGACTCCGGTCGCCGCCGAAGAAGCTCCCGTCAATGGCATGGGTGCCGAGTCCTGGCCTGCTCTGGCTGACGCCCAGGCCCAGGCCCAGGCCCATAGGTCCAAGACTCCCGACCTTGCCACTCCTCCGGGATTAATCTTGCAGCAAAAGACGAATCGGCCTGGAAACTCTAACGCTTCGCACAAGCATTCATCGTCACAATATCAAAAGACAGGCCCTAAACGCAATCCAAATGTTGCACCTCCTTTCCCAGTACCCTTACCTTACCATCAACCATCACTTCCACCTGTTTTTCATCCTATGGTACATCCACCACACATTGCTGCTTCTGGTTATGCTTTCCAGCCATACCCTGGACCCATTGCAAATGTTGAAAATCATATAGCAAAATCTGGATCTGAGACCCCGGTGCAAGGTTTTGTGCAACCGGTTCAGCCCCACCCACGAGGTAATCCAAATGCTTATGGTGTCAATTTTTCTTCTAGAAGACCCAATATGCAAGAGCCTGGTGGGCCTGGTGGCCATTGGAATCATGCTTGGTATCAGCAACGACCATTTAATCCCAGAGAGAACATTCCTATGCAACAGGGGGTTGGACCTAGGCCTTTCTTGAGGCCTCCATTTTTTGGTCCAGCTCCAGGGTTCATGGTTGGCCCAACCATTCCAGGACCTGTCCCCATGTGCTATGTTCCAGTTCCGCCGACTGGTGCAATTAGGGGACCTCATCCTCCCCACTTTATGCCACATCCTTTAAATCCAGGGGCTCCATTACTACACCCGGAGACACATCCGGTAGCTTTGAGGGATAATATTATAAAACAAATAGAGTATTATTTTAGTGATGAAAATCTAAAGAATGACAAGTACCTAATTTCATTGATGGATGACCAAGGGTGGGTGCCAGTAACCACTATTGCTGACTTTAAAAGGGTTAAGAAAATGTGTACAGACATGGCATTTATTCTTGATTCACTGCTGGGTTCAGCTACTGTAGAAGTGCAGGGCAACAAGATACGGAGACGAGTTGAGTGGTCAAAGTGGATTGCAACTTCTACAGACTCTACATCAAAACCGGCCCAACTTGAACAGAGTTCTATCAATGTTTTAGAGAATAGTGATGCCAGTGGTGATGGAAGGACCACTTGTGAGGAGAATGTTGAACTTTCATCATGTGAAAAGAATTTGATGGAGGACAAGCCATCAAATACCGAACATGGCCTTGATACTCTTGACATTGATGGTAGATTACCAGAGTTGACTTGTAATAATGGTGATAAGATTCGAAAGTCTACTGCCAAATCAAATTTTAAGTCCTCATATCTTAAAACGAATCATTGCTCAGACTGCCCTGACCAATCCAAGGGAACTGAGCCTTCAGATATGGATATGAAGAATCTTGGTGGTCTGTCAAGTGATTTTGCAAACACATTTATGCTCGACGAAGAGCTAGAGCTCGAGCAGAAAATAATAAAAAAGGATGATCTCTATCCCAGTAGAAGGGTTGATGATGAAGATGATGAGATTGTCGTCCATGATCAGGATGTCCAGAGACTTGTAATTGTTACCAGGAATTGCAGAGTAGGTGAAGGATCTAAAACTGATGATAAGGAATCAAAAACCATTACCAATGAGCTTGCTTCTGCTATAAACGAAGGCCTTTATTTCTATGAGCAGGAACTGAAAACCAAGCGATCAAACCGTAAAAAGAACAACTCCAGTTACGAAAATAGAGATGCAGGCTCAAGAGTTTCAAATTTGGCCAAAGGATTTTCAAATTTGAAACGTGCTGAAATATCTGGCAGTAACAGTGGCACTGAAGAGTCTATAAGTACTAATTCCCGAAAGAAGCATAGCAAAAACTTCCAAAATCAACAGTCATCCCATAGACAGCGATTCTTCTCGAGCAACTTTAGAAATTATGGAACCGGTCGGAACTCTCTAGGAATCATATCTGAAAGTCCACCAAGTAACTCAGTTGGATTTTTCTTTAGTTCCACACCACCTGAAAATCATGGTCCAAGATCTTCCAAGTTGAGTATTTCTCCCCATGGGGTTCTCTCAGGGAGCAGTCCGCCAGTGGGTTCTGTGCCAAAGTCATTTCCACCATTTCAGCATCCAAGTCATCAGCTTCTAGAAGAAAATGGTTTCAAACAGCAGAAGTACCTAAAGTATCACAAGCGGTGCCTAAATGACAGGAAGAAGTTGGGAATCGGTTGCAGTGAGGAAATGAATACTTTATATAGATTTTGGTCGTATTTCCTAAGAAACATGTTCAACTGCTCAATGTATGATGAGTTCCGGAAATATGCACTTGAAGACGCTGCTGCTAGCTATCATTATGGACTAGAGTGCCTATTCAGATTCTATAGTTATGGGTTGGAGAAGGAATTTAGAGATGACCTGTATGATGACTTTGAACAGCTGACTCTGGAGTTTTACCATAAAGGAAATCTGTATGGCCTGGAAAAATATTGGGCATTTCATCATTATCGGGAAAAACGGGGTCAGAAGGAGCCTCTTAGAAAAAATCAAGAACTGGATCGATTGCTTAGGGAAGTATACCGTAGCTTGGATGATTTCCGTGCCAAAGAGAGGACTACAACGGCAATCACTACCATGAAAGAGAGGAGTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000932 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005844 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009266 GO:0009408 GO:0009628 GO:0009892 GO:0009987 GO:0010286 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0032991 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050896 GO:0060255 GO:0065007 GO:0071704 GO:0090304 GO:1901360 GO:1901361 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

896

Amino Acids

101.06

Weight (kDa)

8.08

Isoelectric Point (pI)

49.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
La	PF05383	289 - 343	4.1e-23	La domain
LARP1_HEAT	PF21071	723 - 870	1.5e-61	LARP1 HEAT repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003434)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G21160 AT5G21160 AT5G21160
fragaria_vesca	FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710
malus_domestica	MD00G1106400.v1.1 MD11G1183000.v1.1
prunus_persica	Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1
pyrus_communis	pycom5153684g00350
rosa_chinensis	RchiOBHm_Chr5g0050001
rosa_laevigata	RLG00000034676
rosa_multiflora	Rmu_sc0000333.1_g000023
rosa_roxburghii	Rroxscaffold_1G00031150
rosa_rugosa	Rorug05G0256500
rosa_samantha	Rh5AG329600 Rh5BG340300 Rh5CG366300 Rh5DG352900
rosa_wichuraiana	Rw5G031120

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	869
AccB1I	GGYRCC	3 cut(s)	98, 952, 2235
AccB7I	CCANNNNNTGG	2 cut(s)	407, 680
AccI	GTMKAC	2 cut(s)	1343, 2613
AccIII	TCCGGA	1 cut(s)	2352
AciI	CCGC	4 cut(s)	69, 752, 2126, 2233
AclWI	GGATC	3 cut(s)	457, 1651, 2601
AcoI	YGGCCR	2 cut(s)	574, 1812
AcsI	RAATTY	5 cut(s)	1234, 1357, 1807, 1828, 2441
AcuI	CTGAAG	2 cut(s)	1413, 1890
AcyI	GRCGYC	1 cut(s)	126
AfaI	GTAC	6 cut(s)	309, 360, 920, 1000, 1885, 2216
AflIII	ACRYGT	1 cut(s)	2322
AgeI	ACCGGT	2 cut(s)	481, 1979
Alw21I	GWGCWC	2 cut(s)	27, 1509
Alw26I	GTCTC	4 cut(s)	449, 830, 1066, 1597
AlwI	GGATC	3 cut(s)	457, 1651, 2601
AlwNI	CAGNNNCTG	3 cut(s)	725, 1043, 1732
Ama87I	CYCGRG	2 cut(s)	1508, 1954
Aor13HI	TCCGGA	1 cut(s)	2352
ApeKI	GCWGC	4 cut(s)	196, 377, 2375, 2378
ApoI	RAATTY	5 cut(s)	1234, 1357, 1807, 1828, 2441
ArsI	GACNNNNNNTTYG	2 cut(s)	1349, 1381
AseI	ATTAAT	1 cut(s)	188
AsiGI	ACCGGT	2 cut(s)	481, 1979
AspA2I	CCTAGG	1 cut(s)	653
AsuC2I	CCSGG	3 cut(s)	183, 461, 833
AsuHPI	GGTGA	4 cut(s)	16, 1193, 1337, 1649
AsuII	TTCGAA	1 cut(s)	1336
AsuNHI	GCTAGC	1 cut(s)	2381
AvaI	CYCGRG	2 cut(s)	1508, 1954
AvaII	GGWCC	9 cut(s)	38, 153, 410, 650, 683, 722, 773, 1191, 2069
AvrII	CCTAGG	1 cut(s)	653
BalI	TGGCCA	2 cut(s)	576, 1814
BanI	GGYRCC	3 cut(s)	98, 952, 2235
BanII	GRGCYC	3 cut(s)	27, 820, 1509
BauI	CACGAG	1 cut(s)	498
BbsI	GAAGAC	3 cut(s)	62, 547, 2376
Bbv12I	GWGCWC	2 cut(s)	27, 1509
BbvI	GCAGC	4 cut(s)	208, 364, 2362, 2365
BccI	CCATC	7 cut(s)	330, 337, 928, 1178, 1234, 1261, 1286
BceAI	ACGGC	1 cut(s)	2673
BclI	TGATCA	1 cut(s)	1588
BcnI	CCSGG	3 cut(s)	183, 461, 833
BcoDI	GTCTC	4 cut(s)	449, 830, 1066, 1597
BfaI	CTAG	7 cut(s)	537, 654, 1502, 1994, 2186, 2382, 2399
BfmI	CTRYAG	3 cut(s)	1044, 1107, 2419
BglI	GCCNNNNNGGC	1 cut(s)	565
BglII	AGATCT	1 cut(s)	2075
BisI	GCNGC	5 cut(s)	69, 197, 378, 2376, 2379
BlnI	CCTAGG	1 cut(s)	653
BlsI	GCNGC	5 cut(s)	70, 198, 379, 2377, 2380
BmcAI	AGTACT	1 cut(s)	1885
Bme18I	GGWCC	9 cut(s)	38, 153, 410, 650, 683, 722, 773, 1191, 2069
BmeT110I	CYCGRG	2 cut(s)	1508, 1954
BmiI	GGNNCC	9 cut(s)	40, 100, 412, 774, 819, 954, 1978, 2237, 2568
BmrI	ACTGGG	2 cut(s)	299, 1539
BmsI	GCATC	3 cut(s)	1162, 1777, 2176
BmtI	GCTAGC	1 cut(s)	2385
BmuI	ACTGGG	2 cut(s)	299, 1539
BoxI	GACNNNNGTC	1 cut(s)	62
BpiI	GAAGAC	3 cut(s)	62, 547, 2376
BplI	GAGNNNNNCTC	2 cut(s)	2080, 2112
BpmI	CTGGAG	3 cut(s)	675, 1753, 2504
Bpu10I	CCTNAGC	1 cut(s)	2603
Bpu14I	TTCGAA	1 cut(s)	1336
BpuEI	CTTGAG	2 cut(s)	685, 1780
BpuMI	CCSGG	3 cut(s)	183, 461, 833
Bsa29I	ATCGAT	1 cut(s)	2596
BsaBI	GATNNNNATC	2 cut(s)	900, 1539
BsaHI	GRCGYC	1 cut(s)	126
BsaI	GGTCTC	1 cut(s)	449
BsaWI	WCCGGW	5 cut(s)	61, 481, 844, 1979, 2352
Bse118I	RCCGGY	3 cut(s)	481, 1126, 1979
Bse1I	ACTGG	9 cut(s)	305, 746, 763, 956, 1176, 1545, 1770, 2129, 2595
Bse3DI	GCAATG	3 cut(s)	372, 414, 1387
Bse8I	GATNNNNATC	2 cut(s)	900, 1539
BseAI	TCCGGA	1 cut(s)	2352
BseCI	ATCGAT	1 cut(s)	2596
BseJI	GATNNNNATC	2 cut(s)	900, 1539
BseMI	GCAATG	3 cut(s)	372, 414, 1387
BseMII	CTCAG	5 cut(s)	444, 1407, 1413, 2040, 2127
BseNI	ACTGG	9 cut(s)	305, 746, 763, 956, 1176, 1545, 1770, 2129, 2595
BseRI	GAGGAG	2 cut(s)	168, 1217
BseXI	GCAGC	4 cut(s)	208, 364, 2362, 2365
BseYI	CCCAGC	1 cut(s)	1030
BsgI	GTGCAG	1 cut(s)	1073
Bsh1285I	CGRYCG	2 cut(s)	66, 1984
BshNI	GGYRCC	3 cut(s)	98, 952, 2235
BshTI	ACCGGT	2 cut(s)	481, 1979
BshVI	ATCGAT	1 cut(s)	2596
BsiEI	CGRYCG	2 cut(s)	66, 1984
BsiHKAI	GWGCWC	2 cut(s)	27, 1509
BsiHKCI	CYCGRG	2 cut(s)	1508, 1954
BsiSI	CCGG	9 cut(s)	62, 182, 461, 482, 833, 845, 1127, 1980, 2353
BslFI	GGGAC	3 cut(s)	24, 713, 786
BsmAI	GTCTC	4 cut(s)	449, 830, 1066, 1597
BsmBI	CGTCTC	1 cut(s)	1066
BsmFI	GGGAC	3 cut(s)	24, 713, 786
BsmI	GAATGC	1 cut(s)	241
Bso31I	GGTCTC	1 cut(s)	449
BsoBI	CYCGRG	2 cut(s)	1508, 1954
Bsp119I	TTCGAA	1 cut(s)	1336
Bsp1286I	GDGCHC	3 cut(s)	27, 820, 1509
Bsp13I	TCCGGA	1 cut(s)	2352
Bsp1407I	TGTACA	1 cut(s)	998
Bsp143I	GATC	7 cut(s)	449, 1534, 1588, 1643, 1745, 2075, 2593
Bsp19I	CCATGG	1 cut(s)	2101
BspACI	CCGC	4 cut(s)	69, 752, 2126, 2233
BspCNI	CTCAG	5 cut(s)	445, 1406, 1414, 2039, 2126
BspDI	ATCGAT	1 cut(s)	2596
BspEI	TCCGGA	1 cut(s)	2352
BspLI	GGNNCC	9 cut(s)	40, 100, 412, 774, 819, 954, 1978, 2237, 2568
BspOI	GCTAGC	1 cut(s)	2385
BspPI	GGATC	3 cut(s)	457, 1651, 2601
BspQI	GCTCTTC	1 cut(s)	1491
BspT104I	TTCGAA	1 cut(s)	1336
BspT107I	GGYRCC	3 cut(s)	98, 952, 2235
BspTNI	GGTCTC	1 cut(s)	449
BsrDI	GCAATG	3 cut(s)	372, 414, 1387
BsrFI	RCCGGY	3 cut(s)	481, 1126, 1979
BsrGI	TGTACA	1 cut(s)	998
BsrI	ACTGG	9 cut(s)	305, 746, 763, 956, 1176, 1545, 1770, 2129, 2595
BssAI	RCCGGY	3 cut(s)	481, 1126, 1979
BssMI	GATC	7 cut(s)	449, 1534, 1588, 1643, 1745, 2075, 2593
BssNAI	GTATAC	1 cut(s)	2614
BssNI	GRCGYC	1 cut(s)	126
BssSI	CACGAG	1 cut(s)	498
BssT1I	CCWWGG	4 cut(s)	653, 943, 1413, 2101
Bst1107I	GTATAC	1 cut(s)	2614
Bst2BI	CACGAG	1 cut(s)	498
Bst4CI	ACNGT	5 cut(s)	1045, 1754, 1862, 1929, 2618
Bst6I	CTCTTC	2 cut(s)	1491, 1866
BstACI	GRCGYC	1 cut(s)	126
BstAUI	TGTACA	1 cut(s)	998
BstBI	TTCGAA	1 cut(s)	1336
BstC8I	GCNNGC	4 cut(s)	114, 1689, 1792, 2383
BstDEI	CTNAG	8 cut(s)	453, 1393, 1422, 2026, 2113, 2315, 2573, 2603
BstDSI	CCRYGG	2 cut(s)	50, 2101
BstKTI	GATC	7 cut(s)	452, 1537, 1591, 1646, 1748, 2078, 2596
BstMAI	GTCTC	4 cut(s)	449, 830, 1066, 1597
BstMBI	GATC	7 cut(s)	449, 1534, 1588, 1643, 1745, 2075, 2593
BstMCI	CGRYCG	2 cut(s)	66, 1984
BstMWI	GCNNNNNNNGC	4 cut(s)	77, 276, 565, 1398
BstNSI	RCATGY	1 cut(s)	2326
BstPAI	GACNNNNGTC	1 cut(s)	62
BstSFI	CTRYAG	3 cut(s)	1044, 1107, 2419
BstV1I	GCAGC	4 cut(s)	208, 364, 2362, 2365
BstV2I	GAAGAC	3 cut(s)	62, 547, 2376
BstX2I	RGATCY	3 cut(s)	449, 1643, 2075
BstYI	RGATCY	3 cut(s)	449, 1643, 2075
BstZ17I	GTATAC	1 cut(s)	2614
Bsu15I	ATCGAT	1 cut(s)	2596
BsuTUI	ATCGAT	1 cut(s)	2596
BtgI	CCRYGG	2 cut(s)	50, 2101
BtsI	GCAGTG	2 cut(s)	1025, 2278
BtsIMutI	CAGTG	6 cut(s)	1025, 1183, 1866, 1867, 2136, 2278
Cac8I	GCNNGC	4 cut(s)	114, 1689, 1792, 2383
CaiI	CAGNNNCTG	3 cut(s)	725, 1043, 1732
Cfr10I	RCCGGY	3 cut(s)	481, 1126, 1979
ClaI	ATCGAT	1 cut(s)	2596
CseI	GACGC	2 cut(s)	134, 2381
Csp6I	GTAC	6 cut(s)	308, 359, 919, 999, 1884, 2215
CspAI	ACCGGT	2 cut(s)	481, 1979
CviQI	GTAC	6 cut(s)	308, 359, 919, 999, 1884, 2215
DdeI	CTNAG	8 cut(s)	453, 1393, 1422, 2026, 2113, 2315, 2573, 2603
DpnI	GATC	7 cut(s)	451, 1536, 1590, 1645, 1747, 2077, 2595
DpnII	GATC	7 cut(s)	449, 1534, 1588, 1643, 1745, 2075, 2593
DraI	TTTAAA	2 cut(s)	807, 979
EaeI	YGGCCR	2 cut(s)	574, 1812
Eam1104I	CTCTTC	2 cut(s)	1491, 1866
EarI	CTCTTC	2 cut(s)	1491, 1866
EciI	GGCGGA	2 cut(s)	741, 2115
Ecl136II	GAGCTC	2 cut(s)	25, 1507
Eco130I	CCWWGG	4 cut(s)	653, 943, 1413, 2101
Eco147I	AGGCCT	3 cut(s)	658, 670, 1710
Eco24I	GRGCYC	3 cut(s)	27, 820, 1509
Eco31I	GGTCTC	1 cut(s)	449
Eco47I	GGWCC	9 cut(s)	38, 153, 410, 650, 683, 722, 773, 1191, 2069
Eco53kI	GAGCTC	2 cut(s)	25, 1507
Eco57I	CTGAAG	2 cut(s)	1413, 1890
Eco88I	CYCGRG	2 cut(s)	1508, 1954
EcoICRI	GAGCTC	2 cut(s)	25, 1507
EcoO109I	RGGNCCY	3 cut(s)	269, 722, 773
EcoT14I	CCWWGG	4 cut(s)	653, 943, 1413, 2101
EcoT38I	GRGCYC	3 cut(s)	27, 820, 1509
ErhI	CCWWGG	4 cut(s)	653, 943, 1413, 2101
Esp3I	CGTCTC	1 cut(s)	1066
FalI	AAGNNNNNCTT	2 cut(s)	1180, 1212
FaqI	GGGAC	3 cut(s)	24, 713, 786
FbaI	TGATCA	1 cut(s)	1588
FblI	GTMKAC	2 cut(s)	1343, 2613
Fnu4HI	GCNGC	5 cut(s)	69, 197, 378, 2376, 2379
FriOI	GRGCYC	3 cut(s)	27, 820, 1509
Fsp4HI	GCNGC	5 cut(s)	69, 197, 378, 2376, 2379
FspBI	CTAG	7 cut(s)	537, 654, 1502, 1994, 2186, 2382, 2399
GluI	GCNGC	5 cut(s)	69, 197, 378, 2376, 2379
GsaI	CCCAGC	1 cut(s)	1034
GsuI	CTGGAG	3 cut(s)	675, 1753, 2504
HapII	CCGG	9 cut(s)	62, 182, 461, 482, 833, 845, 1127, 1980, 2353
HgaI	GACGC	2 cut(s)	134, 2381
Hin1I	GRCGYC	1 cut(s)	126
HincII	GTYRAC	1 cut(s)	1311
HindII	GTYRAC	1 cut(s)	1311
HpaII	CCGG	9 cut(s)	62, 182, 461, 482, 833, 845, 1127, 1980, 2353
HphI	GGTGA	4 cut(s)	16, 1193, 1337, 1649
Hpy166II	GTNNAC	5 cut(s)	999, 1311, 1344, 2015, 2614
Hpy188I	TCNGA	7 cut(s)	454, 1396, 1432, 1986, 2008, 2414, 2562
Hpy8I	GTNNAC	5 cut(s)	999, 1311, 1344, 2015, 2614
Hpy99I	CGWCG	1 cut(s)	1496
HpyAV	CCTTC	7 cut(s)	1182, 1437, 1545, 1634, 1700, 2431, 2557
HpyCH4III	ACNGT	5 cut(s)	1045, 1754, 1862, 1929, 2618
HpyCH4IV	ACGT	1 cut(s)	1837
HpyF10VI	GCNNNNNNNGC	4 cut(s)	77, 276, 565, 1398
HpyF3I	CTNAG	8 cut(s)	453, 1393, 1422, 2026, 2113, 2315, 2573, 2603
HpySE526I	ACGT	1 cut(s)	1837
Hsp92I	GRCGYC	1 cut(s)	126
Kpn2I	TCCGGA	1 cut(s)	2352
Ksp22I	TGATCA	1 cut(s)	1588
Kzo9I	GATC	7 cut(s)	449, 1534, 1588, 1643, 1745, 2075, 2593
LguI	GCTCTTC	1 cut(s)	1491
LmnI	GCTCC	5 cut(s)	85, 694, 823, 2118, 2566
Lsp1109I	GCAGC	4 cut(s)	208, 364, 2362, 2365
LweI	GCATC	3 cut(s)	1162, 1777, 2176
MaeI	CTAG	7 cut(s)	537, 654, 1502, 1994, 2186, 2382, 2399
MaeII	ACGT	1 cut(s)	1837
MaeIII	GTNAC	6 cut(s)	249, 958, 1615, 1772, 1856, 2021
MalI	GATC	7 cut(s)	451, 1536, 1590, 1645, 1747, 2077, 2595
MboI	GATC	7 cut(s)	449, 1534, 1588, 1643, 1745, 2075, 2593
MflI	RGATCY	3 cut(s)	449, 1643, 2075
MhlI	GDGCHC	3 cut(s)	27, 820, 1509
MlsI	TGGCCA	2 cut(s)	576, 1814
MluNI	TGGCCA	2 cut(s)	576, 1814
MlyI	GAGTC	6 cut(s)	52, 113, 154, 1106, 1883, 2473
MmeI	TCCRAC	4 cut(s)	628, 1964, 2011, 2412
Mox20I	TGGCCA	2 cut(s)	576, 1814
MroI	TCCGGA	1 cut(s)	2352
MscI	TGGCCA	2 cut(s)	576, 1814
MseI	TTAA	7 cut(s)	188, 612, 806, 978, 987, 1362, 1377
MslI	CAYNNNNRTG	3 cut(s)	632, 1484, 2669
Msp20I	TGGCCA	2 cut(s)	576, 1814
MspA1I	CMGCKG	1 cut(s)	2476
MspI	CCGG	9 cut(s)	62, 182, 461, 482, 833, 845, 1127, 1980, 2353
Mva1269I	GAATGC	1 cut(s)	241
MwoI	GCNNNNNNNGC	4 cut(s)	77, 276, 565, 1398
NciI	CCSGG	3 cut(s)	183, 461, 833
NcoI	CCATGG	1 cut(s)	2101
NdeII	GATC	7 cut(s)	449, 1534, 1588, 1643, 1745, 2075, 2593
NheI	GCTAGC	1 cut(s)	2381
NlaIV	GGNNCC	9 cut(s)	40, 100, 412, 774, 819, 954, 1978, 2237, 2568
NmeAIII	GCCGAG	1 cut(s)	127
NmuCI	GTSAC	1 cut(s)	249
NspI	RCATGY	1 cut(s)	2326
NspV	TTCGAA	1 cut(s)	1336
PaeR7I	CTCGAG	2 cut(s)	1508, 1954
PceI	AGGCCT	3 cut(s)	658, 670, 1710
PciI	ACATGT	1 cut(s)	2322
PciSI	GCTCTTC	1 cut(s)	1491
PctI	GAATGC	1 cut(s)	241
PflMI	CCANNNNNTGG	2 cut(s)	407, 680
PfoI	TCCNGGA	2 cut(s)	181, 718
PinAI	ACCGGT	2 cut(s)	481, 1979
PkrI	GCNGC	5 cut(s)	70, 198, 379, 2377, 2380
PleI	GAGTC	6 cut(s)	52, 112, 154, 1106, 1882, 2473
PpsI	GAGTC	6 cut(s)	52, 112, 154, 1106, 1882, 2473
PpuMI	RGGWCCY	2 cut(s)	722, 773
PscI	ACATGT	1 cut(s)	2322
PshAI	GACNNNNGTC	1 cut(s)	62
PshBI	ATTAAT	1 cut(s)	188
PsiI	TTATAA	1 cut(s)	869
Psp124BI	GAGCTC	2 cut(s)	27, 1509
Psp5II	RGGWCCY	2 cut(s)	722, 773
PspFI	CCCAGC	1 cut(s)	1030
PspN4I	GGNNCC	9 cut(s)	40, 100, 412, 774, 819, 954, 1978, 2237, 2568
PspPPI	RGGWCCY	2 cut(s)	722, 773
PspXI	VCTCGAGB	1 cut(s)	1508
PsrI	GAACNNNNNNTAC	2 cut(s)	2333, 2365
PstNI	CAGNNNCTG	3 cut(s)	725, 1043, 1732
PsuI	RGATCY	3 cut(s)	449, 1643, 2075
PvuII	CAGCTG	1 cut(s)	2476
RsaI	GTAC	6 cut(s)	309, 360, 920, 1000, 1885, 2216
RsaNI	GTAC	6 cut(s)	308, 359, 919, 999, 1884, 2215
RseI	CAYNNNNRTG	3 cut(s)	632, 1484, 2669
SacI	GAGCTC	2 cut(s)	27, 1509
SapI	GCTCTTC	1 cut(s)	1491
SaqAI	TTAA	7 cut(s)	188, 612, 806, 978, 987, 1362, 1377
SatI	GCNGC	5 cut(s)	69, 197, 378, 2376, 2379
Sau3AI	GATC	7 cut(s)	449, 1534, 1588, 1643, 1745, 2075, 2593
ScaI	AGTACT	1 cut(s)	1885
SchI	GAGTC	6 cut(s)	52, 113, 154, 1106, 1883, 2473
SduI	GDGCHC	3 cut(s)	27, 820, 1509
SfaNI	GCATC	3 cut(s)	1162, 1777, 2176
SfcI	CTRYAG	3 cut(s)	1044, 1107, 2419
Sfr274I	CTCGAG	2 cut(s)	1508, 1954
SfuI	TTCGAA	1 cut(s)	1336
SinI	GGWCC	9 cut(s)	38, 153, 410, 650, 683, 722, 773, 1191, 2069
SlaI	CTCGAG	2 cut(s)	1508, 1954
SmiMI	CAYNNNNRTG	3 cut(s)	632, 1484, 2669
SmlI	CTYRAG	4 cut(s)	664, 1508, 1795, 1954
SmoI	CTYRAG	4 cut(s)	664, 1508, 1795, 1954
SseBI	AGGCCT	3 cut(s)	658, 670, 1710
SsiI	CCGC	4 cut(s)	69, 752, 2126, 2233
SspI	AATATT	2 cut(s)	865, 2525
SspMI	CTAG	7 cut(s)	537, 654, 1502, 1994, 2186, 2382, 2399
SstI	GAGCTC	2 cut(s)	27, 1509
StuI	AGGCCT	3 cut(s)	658, 670, 1710
StyI	CCWWGG	4 cut(s)	653, 943, 1413, 2101
TaaI	ACNGT	5 cut(s)	1045, 1754, 1862, 1929, 2618
TaiI	ACGT	1 cut(s)	1840
TaqI	TCGA	5 cut(s)	1336, 1491, 1509, 1955, 2596
TatI	WGTACW	2 cut(s)	998, 1883
TauI	GCSGC	1 cut(s)	71
Tru1I	TTAA	7 cut(s)	188, 612, 806, 978, 987, 1362, 1377
Tru9I	TTAA	7 cut(s)	188, 612, 806, 978, 987, 1362, 1377
TscAI	CASTG	6 cut(s)	1032, 1183, 1867, 1873, 2136, 2278
TseFI	GTSAC	1 cut(s)	249
TseI	GCWGC	4 cut(s)	196, 377, 2375, 2378
Tsp45I	GTSAC	1 cut(s)	249
TspGWI	ACGGA	2 cut(s)	1084, 2624
TspRI	CASTG	6 cut(s)	1032, 1183, 1867, 1873, 2136, 2278
Van91I	CCANNNNNTGG	2 cut(s)	407, 680
VpaK11BI	GGWCC	9 cut(s)	38, 153, 410, 650, 683, 722, 773, 1191, 2069
VspI	ATTAAT	1 cut(s)	188
XapI	RAATTY	5 cut(s)	1234, 1357, 1807, 1828, 2441
XbaI	TCTAGA	2 cut(s)	536, 2185
XceI	RCATGY	1 cut(s)	2326
XcmI	CCANNNNNNNNNTGG	1 cut(s)	404
XhoI	CTCGAG	2 cut(s)	1508, 1954
XmaJI	CCTAGG	1 cut(s)	653
XmiI	GTMKAC	2 cut(s)	1343, 2613
XspI	CTAG	7 cut(s)	537, 654, 1502, 1994, 2186, 2382, 2399
ZrmI	AGTACT	1 cut(s)	1885

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.