Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0003434

Physical Location & Seq

Genomic Coordinates Reverse (-)

48055599 .. 48064238

Gene Structure 8640 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000034676

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2688 bp

ATGGCTGAAACTGATGAGCTCAATGTGAATGGTCCCAAATCCCCATGGAAGACTCCGGTCGCCGCCGAAGAAGCTCCCGTCAATGGCATGGGTGCCGAGTCCTGGCCTGCTCTGGCTGACGCCCAGGCCCAGGCCCATAGGTCCAAGACTCCCGACCTTGCCACTCCTCTGCCTCCTCAGGGATTAATCTCGCAGCAAAAGACGAATCGGCCTGGAAACTCTAACGCTTCGCACAAGCATTCATCGTCACAATATCAAAAGACAGGCCCTAAACGCAATCCAAATGTTGCACCTCCTTTCCCAGTACCCTTACCTTACCATCAACCATCACTTCCACCTGTTTTTCATACTATGGTACATCCGCCACACATTGCTGCTTCTGGTTATGCTTTCCAGCCATACCCTGGACCCATTGCAAATGTTGAAAATCATATAGCAAAATCTGGATCTGAGACCTCGGTGCAAGGTTTTGTGCAACCGGTTCAGCCCCAACCACGAGGTAATCCAAATGCTTATGGTGTCAATTTTTCTTCTAGAAGACCCAATATGCAAGAGCCTGGTGGGCCTGGTGGCCATTGGAATCATGCTTGGTATCAGCAACGACCATTTAATCCCAGAGAGAACATTCCTATGCAACAGGGGGTTGGACCTAGGCCTTTCTTGAGACCTCCATTTTTTGGTCCAGCTCCAGGGTTCATGGTTGGCCCAACCATTCCAGGACCTGTCCCCATGTGCTATGTTCCAGTTCCGCCGACTGGTGCAATTAGGGGACCTCATCCTTCCCACTTTATGCCACATCCTTTAAATCCAGGGGCTCCATTACTACACCCGGAGACACATCCGGTAGCTTTGAGGGATAATATTATAAAACAAATAGAGTATTATTTTAGTGATGAAAATCTAAAGAATGACAAGTACCTAATTTCATTGATGGACGACCAAGGGTGGGTGCCAGTAACCACTATTGCTGACTTTAAAAGGGTTAAGAAAATGTGTACAGACATAGCATTTATTCTTGATTCACTGCTGGGTTCAGCTACCGTAGAAGTGCAGGGCAACAAGATACGGAGACGAGTTGAGTGGTCAAAGTGGATTGCAACTTCTACAGACTCTACATCAAAATCGGCCCAACTTGAACAGAGGTCTATCAATGTTTTAGAGAATAGTGATGCCAGTGGTGATGGAAGGACCACTTGCGAGGAGAATGTTGAACTTTCATCATGTGAAAAGAATTTGATGGAGGACAAGCCATCAAATACCGAACATGGCCTTGATACTCTTGACATTGATGGTAGATTACCAGAGTTGACTTGTAATAATGGTGATAAGATTCGAAAGTCTACTGCCAAATCAAATTTTAAGTCCTCATATCTTAAAACGAATCATTGCTTAGACTGCCCTGACCAATCCAAGGGAACTGAGCCTTCAGATATGGATATGAAGAATCTTGGTGGTCTGTCAAGTGATTTTGCAAACACATTTATGCTCGATGAAGAGCTAGAGCTCGAGCAGAAAATAATAAAAAAGGATGATCTCTATCCCAGTAGAAGGGTTGATGATGAAGATGATGAGATTGTCGTCCATGATCAGGATGTCCAGAGACTTGTAATTGTTACCAGGAATTGCAAAGTAGGTGAAGGATCTAAAACTGATGATAAGGAATCAAAAACCATTACCAATGAGCTCGCTTCTGCTATAAACGAAGGCCTTTATTTCTATGAGCAGGAACTGAAAACCAAGCGATCAAACCGTAAAAAGAACAACTCCAGTTACGAAAATAGAGATGCAGGCTCAAGAGTTTCAAATTTGGCCAAAGGATTTTCAAATTTGAAACGTGCTGAAATATCTGGCAGTAACAGTGGCACTGAAGAGTCTATAAGTGCTAATTCCCGAAAGAAGCATAGCAAAAACTTCCAAAATCAACAGTCATCCCATAGACAGCGATTCTTCTCGAGCAACTTTAGAAATTATGGAACCGGTCGGAACTCTCTAGGAATCATATCTGAAAGTCCACCAAGTAACTCAGTTGGATTTTTCTTTAGTTCCACACCACCTGAAAATCATGGTCCAAGATCTTCCAAGTTGAGTATATCTCCCCATGGGGTTCTCTCAGGGAGCAGTCCGCCAGTGGGTTCTGTGCCAAAGTCATTTCCACCATTTCAGCATCCAAGTCATCAGCTTCTAGAAGAAAATGGTTTCAAACAGCAGAAGTACCTAAAGTATCACAAGCGGTGCCTAAATGACAGGAAGAAGTTGGGAATCGGTTGCAGTGAGGAAATGAATACTTTATATAGATTTTGGTCGTATTTCCTAAGAAACATGTTCAACTGCTCAATGTATGATGAATTCCGGAAATATGCACTTGAAGACGCTGCTGCTAGCTATCATTATGGACTAGAGTGCCTATTCAGATTCTATAGTTATGGGTTGGAGAAGGAATTTAGAGATGACCTGTATGATGACTTTGAACAGCTGACTCTGGAGTTTTACCATAAAGGAAATCTGTATGGCCTGGAAAAATATTGGGCATTTCATCATTATCGGGAAAAACGGGGTCAGAAGGAGCCTCTTAGAAAAAATCAAGAATTGGATCGATTGCTTAGGGAAGTATACCGTAGCTTGGATGATTTCCGTGCCAAAGAGAGGACTACAACGGCAATCACTACCATGAAAGAGAGGAGTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000932 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005844 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009266 GO:0009408 GO:0009628 GO:0009892 GO:0009987 GO:0010286 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0032991 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050896 GO:0060255 GO:0065007 GO:0071704 GO:0090304 GO:1901360 GO:1901361 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

896

Amino Acids

100.92

Weight (kDa)

8.23

Isoelectric Point (pI)

49.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
La	PF05383	288 - 342	3.8e-23	La domain
LARP1_HEAT	PF21071	722 - 869	1.5e-61	LARP1 HEAT repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003434)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G21160 AT5G21160 AT5G21160
fragaria_vesca	FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710
malus_domestica	MD00G1106400.v1.1 MD11G1183000.v1.1
prunus_persica	Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1
pyrus_communis	pycom5153684g00350
rosa_chinensis	RchiOBHm_Chr5g0050001
rosa_laevigata	RLG00000034676
rosa_multiflora	Rmu_sc0000333.1_g000023
rosa_roxburghii	Rroxscaffold_1G00031150
rosa_rugosa	Rorug05G0256500
rosa_samantha	Rh5AG329600 Rh5BG340300 Rh5CG366300 Rh5DG352900
rosa_wichuraiana	Rw5G031120

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	866
AccB1I	GGYRCC	3 cut(s)	92, 949, 2232
AccB7I	CCANNNNNTGG	2 cut(s)	404, 677
AccI	GTMKAC	2 cut(s)	1340, 2610
AccIII	TCCGGA	1 cut(s)	2349
AciI	CCGC	5 cut(s)	63, 362, 749, 2123, 2230
AclWI	GGATC	3 cut(s)	454, 1648, 2598
AcoI	YGGCCR	2 cut(s)	571, 1809
AcsI	RAATTY	6 cut(s)	1231, 1354, 1804, 1825, 2345, 2438
AcuI	CTGAAG	2 cut(s)	1410, 1887
AcyI	GRCGYC	1 cut(s)	120
AfaI	GTAC	5 cut(s)	306, 357, 917, 997, 2213
AflIII	ACRYGT	1 cut(s)	2319
AgeI	ACCGGT	2 cut(s)	478, 1976
Alw21I	GWGCWC	3 cut(s)	21, 1506, 1686
Alw26I	GTCTC	5 cut(s)	446, 658, 827, 1063, 1594
AlwI	GGATC	3 cut(s)	454, 1648, 2598
AlwNI	CAGNNNCTG	2 cut(s)	722, 1729
Ama87I	CYCGRG	2 cut(s)	1505, 1951
Aor13HI	TCCGGA	1 cut(s)	2349
ApeKI	GCWGC	4 cut(s)	193, 374, 2372, 2375
ApoI	RAATTY	6 cut(s)	1231, 1354, 1804, 1825, 2345, 2438
ArsI	GACNNNNNNTTYG	2 cut(s)	1346, 1378
AseI	ATTAAT	1 cut(s)	185
AsiGI	ACCGGT	2 cut(s)	478, 1976
AspA2I	CCTAGG	1 cut(s)	650
AsuC2I	CCSGG	1 cut(s)	830
AsuHPI	GGTGA	3 cut(s)	1190, 1334, 1646
AsuII	TTCGAA	1 cut(s)	1333
AsuNHI	GCTAGC	1 cut(s)	2378
AvaI	CYCGRG	2 cut(s)	1505, 1951
AvaII	GGWCC	9 cut(s)	32, 141, 407, 647, 680, 719, 770, 1188, 2066
AvrII	CCTAGG	1 cut(s)	650
AxyI	CCTNAGG	1 cut(s)	177
BalI	TGGCCA	2 cut(s)	573, 1811
BanI	GGYRCC	3 cut(s)	92, 949, 2232
BanII	GRGCYC	4 cut(s)	21, 817, 1506, 1686
BauI	CACGAG	1 cut(s)	495
BbsI	GAAGAC	3 cut(s)	56, 544, 2373
Bbv12I	GWGCWC	3 cut(s)	21, 1506, 1686
BbvI	GCAGC	4 cut(s)	205, 361, 2359, 2362
BccI	CCATC	7 cut(s)	327, 334, 925, 1175, 1231, 1258, 1283
BceAI	ACGGC	1 cut(s)	2670
BclI	TGATCA	1 cut(s)	1585
BcnI	CCSGG	1 cut(s)	830
BcoDI	GTCTC	5 cut(s)	446, 658, 827, 1063, 1594
BfaI	CTAG	7 cut(s)	534, 651, 1499, 1991, 2183, 2379, 2396
BfmI	CTRYAG	2 cut(s)	1104, 2416
BglI	GCCNNNNNGGC	1 cut(s)	562
BglII	AGATCT	1 cut(s)	2072
BisI	GCNGC	5 cut(s)	63, 194, 375, 2373, 2376
BlnI	CCTAGG	1 cut(s)	650
BlsI	GCNGC	5 cut(s)	64, 195, 376, 2374, 2377
Bme18I	GGWCC	9 cut(s)	32, 141, 407, 647, 680, 719, 770, 1188, 2066
BmeT110I	CYCGRG	2 cut(s)	1505, 1951
BmiI	GGNNCC	9 cut(s)	34, 94, 409, 771, 816, 951, 1975, 2234, 2565
BmrI	ACTGGG	2 cut(s)	296, 1536
BmsI	GCATC	3 cut(s)	1159, 1774, 2173
BmtI	GCTAGC	1 cut(s)	2382
BmuI	ACTGGG	2 cut(s)	296, 1536
BoxI	GACNNNNGTC	1 cut(s)	56
BpiI	GAAGAC	3 cut(s)	56, 544, 2373
BplI	GAGNNNNNCTC	2 cut(s)	2077, 2109
BpmI	CTGGAG	3 cut(s)	672, 1750, 2501
Bpu10I	CCTNAGC	1 cut(s)	2600
Bpu14I	TTCGAA	1 cut(s)	1333
BpuEI	CTTGAG	2 cut(s)	682, 1777
BpuMI	CCSGG	1 cut(s)	830
Bsa29I	ATCGAT	1 cut(s)	2593
BsaBI	GATNNNNATC	2 cut(s)	897, 1536
BsaHI	GRCGYC	1 cut(s)	120
BsaI	GGTCTC	2 cut(s)	446, 658
BsaWI	WCCGGW	5 cut(s)	55, 478, 841, 1976, 2349
Bse118I	RCCGGY	2 cut(s)	478, 1976
Bse1I	ACTGG	8 cut(s)	302, 743, 760, 953, 1173, 1542, 1767, 2126
Bse21I	CCTNAGG	1 cut(s)	177
Bse3DI	GCAATG	3 cut(s)	369, 411, 1384
Bse8I	GATNNNNATC	2 cut(s)	897, 1536
BseAI	TCCGGA	1 cut(s)	2349
BseCI	ATCGAT	1 cut(s)	2593
BseGI	GGATG	9 cut(s)	358, 775, 796, 838, 1534, 1597, 1928, 2164, 2629
BseJI	GATNNNNATC	2 cut(s)	897, 1536
BseMI	GCAATG	3 cut(s)	369, 411, 1384
BseMII	CTCAG	5 cut(s)	191, 441, 1410, 2037, 2124
BseNI	ACTGG	8 cut(s)	302, 743, 760, 953, 1173, 1542, 1767, 2126
BseRI	GAGGAG	3 cut(s)	156, 165, 1214
BseXI	GCAGC	4 cut(s)	205, 361, 2359, 2362
BseYI	CCCAGC	1 cut(s)	1027
BsgI	GTGCAG	1 cut(s)	1070
Bsh1285I	CGRYCG	2 cut(s)	60, 1981
BshNI	GGYRCC	3 cut(s)	92, 949, 2232
BshTI	ACCGGT	2 cut(s)	478, 1976
BshVI	ATCGAT	1 cut(s)	2593
BsiEI	CGRYCG	2 cut(s)	60, 1981
BsiHKAI	GWGCWC	3 cut(s)	21, 1506, 1686
BsiHKCI	CYCGRG	2 cut(s)	1505, 1951
BsiSI	CCGG	6 cut(s)	56, 479, 830, 842, 1977, 2350
BslFI	GGGAC	3 cut(s)	18, 710, 783
BsmAI	GTCTC	5 cut(s)	446, 658, 827, 1063, 1594
BsmBI	CGTCTC	1 cut(s)	1063
BsmFI	GGGAC	3 cut(s)	18, 710, 783
BsmI	GAATGC	1 cut(s)	238
Bso31I	GGTCTC	2 cut(s)	446, 658
BsoBI	CYCGRG	2 cut(s)	1505, 1951
Bsp119I	TTCGAA	1 cut(s)	1333
Bsp1286I	GDGCHC	4 cut(s)	21, 817, 1506, 1686
Bsp13I	TCCGGA	1 cut(s)	2349
Bsp1407I	TGTACA	1 cut(s)	995
Bsp143I	GATC	7 cut(s)	446, 1531, 1585, 1640, 1742, 2072, 2590
Bsp19I	CCATGG	2 cut(s)	44, 2098
BspACI	CCGC	5 cut(s)	63, 362, 749, 2123, 2230
BspCNI	CTCAG	5 cut(s)	190, 442, 1411, 2036, 2123
BspDI	ATCGAT	1 cut(s)	2593
BspEI	TCCGGA	1 cut(s)	2349
BspLI	GGNNCC	9 cut(s)	34, 94, 409, 771, 816, 951, 1975, 2234, 2565
BspOI	GCTAGC	1 cut(s)	2382
BspPI	GGATC	3 cut(s)	454, 1648, 2598
BspQI	GCTCTTC	1 cut(s)	1488
BspT104I	TTCGAA	1 cut(s)	1333
BspT107I	GGYRCC	3 cut(s)	92, 949, 2232
BspTNI	GGTCTC	2 cut(s)	446, 658
BsrDI	GCAATG	3 cut(s)	369, 411, 1384
BsrFI	RCCGGY	2 cut(s)	478, 1976
BsrGI	TGTACA	1 cut(s)	995
BsrI	ACTGG	8 cut(s)	302, 743, 760, 953, 1173, 1542, 1767, 2126
BssAI	RCCGGY	2 cut(s)	478, 1976
BssMI	GATC	7 cut(s)	446, 1531, 1585, 1640, 1742, 2072, 2590
BssNAI	GTATAC	1 cut(s)	2611
BssNI	GRCGYC	1 cut(s)	120
BssSI	CACGAG	1 cut(s)	495
BssT1I	CCWWGG	5 cut(s)	44, 650, 940, 1410, 2098
Bst1107I	GTATAC	1 cut(s)	2611
Bst2BI	CACGAG	1 cut(s)	495
Bst4CI	ACNGT	5 cut(s)	1042, 1751, 1859, 1926, 2615
Bst6I	CTCTTC	2 cut(s)	1488, 1863
BstACI	GRCGYC	1 cut(s)	120
BstAUI	TGTACA	1 cut(s)	995
BstBI	TTCGAA	1 cut(s)	1333
BstC8I	GCNNGC	4 cut(s)	108, 1686, 1789, 2380
BstDEI	CTNAG	9 cut(s)	177, 450, 1390, 1419, 2023, 2110, 2312, 2570, 2600
BstDSI	CCRYGG	2 cut(s)	44, 2098
BstF5I	GGATG	9 cut(s)	358, 775, 796, 838, 1534, 1597, 1928, 2164, 2629
BstKTI	GATC	7 cut(s)	449, 1534, 1588, 1643, 1745, 2075, 2593
BstMAI	GTCTC	5 cut(s)	446, 658, 827, 1063, 1594
BstMBI	GATC	7 cut(s)	446, 1531, 1585, 1640, 1742, 2072, 2590
BstMCI	CGRYCG	2 cut(s)	60, 1981
BstMWI	GCNNNNNNNGC	4 cut(s)	71, 273, 562, 1395
BstNSI	RCATGY	1 cut(s)	2323
BstPAI	GACNNNNGTC	1 cut(s)	56
BstSFI	CTRYAG	2 cut(s)	1104, 2416
BstV1I	GCAGC	4 cut(s)	205, 361, 2359, 2362
BstV2I	GAAGAC	3 cut(s)	56, 544, 2373
BstX2I	RGATCY	3 cut(s)	446, 1640, 2072
BstYI	RGATCY	3 cut(s)	446, 1640, 2072
BstZ17I	GTATAC	1 cut(s)	2611
Bsu15I	ATCGAT	1 cut(s)	2593
Bsu36I	CCTNAGG	1 cut(s)	177
BsuTUI	ATCGAT	1 cut(s)	2593
BtgI	CCRYGG	2 cut(s)	44, 2098
BtsCI	GGATG	9 cut(s)	358, 775, 796, 838, 1534, 1597, 1928, 2164, 2629
BtsI	GCAGTG	2 cut(s)	1022, 2275
BtsIMutI	CAGTG	6 cut(s)	1022, 1180, 1863, 1864, 2133, 2275
Cac8I	GCNNGC	4 cut(s)	108, 1686, 1789, 2380
CaiI	CAGNNNCTG	2 cut(s)	722, 1729
Cfr10I	RCCGGY	2 cut(s)	478, 1976
ClaI	ATCGAT	1 cut(s)	2593
CseI	GACGC	2 cut(s)	128, 2378
Csp6I	GTAC	5 cut(s)	305, 356, 916, 996, 2212
CspAI	ACCGGT	2 cut(s)	478, 1976
CviQI	GTAC	5 cut(s)	305, 356, 916, 996, 2212
DdeI	CTNAG	9 cut(s)	177, 450, 1390, 1419, 2023, 2110, 2312, 2570, 2600
DpnI	GATC	7 cut(s)	448, 1533, 1587, 1642, 1744, 2074, 2592
DpnII	GATC	7 cut(s)	446, 1531, 1585, 1640, 1742, 2072, 2590
DraI	TTTAAA	2 cut(s)	804, 976
EaeI	YGGCCR	2 cut(s)	571, 1809
Eam1104I	CTCTTC	2 cut(s)	1488, 1863
EarI	CTCTTC	2 cut(s)	1488, 1863
EciI	GGCGGA	3 cut(s)	351, 738, 2112
Ecl136II	GAGCTC	3 cut(s)	19, 1504, 1684
Eco130I	CCWWGG	5 cut(s)	44, 650, 940, 1410, 2098
Eco147I	AGGCCT	2 cut(s)	655, 1707
Eco24I	GRGCYC	4 cut(s)	21, 817, 1506, 1686
Eco31I	GGTCTC	2 cut(s)	446, 658
Eco47I	GGWCC	9 cut(s)	32, 141, 407, 647, 680, 719, 770, 1188, 2066
Eco53kI	GAGCTC	3 cut(s)	19, 1504, 1684
Eco57I	CTGAAG	2 cut(s)	1410, 1887
Eco81I	CCTNAGG	1 cut(s)	177
Eco88I	CYCGRG	2 cut(s)	1505, 1951
EcoICRI	GAGCTC	3 cut(s)	19, 1504, 1684
EcoO109I	RGGNCCY	3 cut(s)	266, 719, 770
EcoRI	GAATTC	1 cut(s)	2345
EcoT14I	CCWWGG	5 cut(s)	44, 650, 940, 1410, 2098
EcoT38I	GRGCYC	4 cut(s)	21, 817, 1506, 1686
ErhI	CCWWGG	5 cut(s)	44, 650, 940, 1410, 2098
Esp3I	CGTCTC	1 cut(s)	1063
FalI	AAGNNNNNCTT	2 cut(s)	1177, 1209
FaqI	GGGAC	3 cut(s)	18, 710, 783
FbaI	TGATCA	1 cut(s)	1585
FblI	GTMKAC	2 cut(s)	1340, 2610
Fnu4HI	GCNGC	5 cut(s)	63, 194, 375, 2373, 2376
FokI	GGATG	9 cut(s)	345, 762, 783, 825, 1541, 1604, 1915, 2151, 2636
FriOI	GRGCYC	4 cut(s)	21, 817, 1506, 1686
Fsp4HI	GCNGC	5 cut(s)	63, 194, 375, 2373, 2376
FspBI	CTAG	7 cut(s)	534, 651, 1499, 1991, 2183, 2379, 2396
GluI	GCNGC	5 cut(s)	63, 194, 375, 2373, 2376
GsaI	CCCAGC	1 cut(s)	1031
GsuI	CTGGAG	3 cut(s)	672, 1750, 2501
HapII	CCGG	6 cut(s)	56, 479, 830, 842, 1977, 2350
HgaI	GACGC	2 cut(s)	128, 2378
Hin1I	GRCGYC	1 cut(s)	120
HincII	GTYRAC	1 cut(s)	1308
HindII	GTYRAC	1 cut(s)	1308
HpaII	CCGG	6 cut(s)	56, 479, 830, 842, 1977, 2350
HphI	GGTGA	3 cut(s)	1190, 1334, 1646
Hpy166II	GTNNAC	5 cut(s)	996, 1308, 1341, 2012, 2611
Hpy188I	TCNGA	6 cut(s)	451, 1429, 1983, 2005, 2411, 2559
Hpy8I	GTNNAC	5 cut(s)	996, 1308, 1341, 2012, 2611
HpyAV	CCTTC	8 cut(s)	789, 1179, 1434, 1542, 1631, 1697, 2428, 2554
HpyCH4III	ACNGT	5 cut(s)	1042, 1751, 1859, 1926, 2615
HpyCH4IV	ACGT	1 cut(s)	1834
HpyF10VI	GCNNNNNNNGC	4 cut(s)	71, 273, 562, 1395
HpyF3I	CTNAG	9 cut(s)	177, 450, 1390, 1419, 2023, 2110, 2312, 2570, 2600
HpySE526I	ACGT	1 cut(s)	1834
Hsp92I	GRCGYC	1 cut(s)	120
Kpn2I	TCCGGA	1 cut(s)	2349
Ksp22I	TGATCA	1 cut(s)	1585
Kzo9I	GATC	7 cut(s)	446, 1531, 1585, 1640, 1742, 2072, 2590
LguI	GCTCTTC	1 cut(s)	1488
LmnI	GCTCC	5 cut(s)	79, 691, 820, 2115, 2563
Lsp1109I	GCAGC	4 cut(s)	205, 361, 2359, 2362
LweI	GCATC	3 cut(s)	1159, 1774, 2173
MaeI	CTAG	7 cut(s)	534, 651, 1499, 1991, 2183, 2379, 2396
MaeII	ACGT	1 cut(s)	1834
MaeIII	GTNAC	6 cut(s)	246, 955, 1612, 1769, 1853, 2018
MalI	GATC	7 cut(s)	448, 1533, 1587, 1642, 1744, 2074, 2592
MboI	GATC	7 cut(s)	446, 1531, 1585, 1640, 1742, 2072, 2590
MflI	RGATCY	3 cut(s)	446, 1640, 2072
MhlI	GDGCHC	4 cut(s)	21, 817, 1506, 1686
MlsI	TGGCCA	2 cut(s)	573, 1811
MluNI	TGGCCA	2 cut(s)	573, 1811
MlyI	GAGTC	6 cut(s)	46, 107, 142, 1103, 1880, 2470
MmeI	TCCRAC	4 cut(s)	625, 1961, 2008, 2409
Mox20I	TGGCCA	2 cut(s)	573, 1811
MroI	TCCGGA	1 cut(s)	2349
MscI	TGGCCA	2 cut(s)	573, 1811
MseI	TTAA	7 cut(s)	185, 609, 803, 975, 984, 1359, 1374
MslI	CAYNNNNRTG	3 cut(s)	629, 1481, 2666
Msp20I	TGGCCA	2 cut(s)	573, 1811
MspA1I	CMGCKG	1 cut(s)	2473
MspI	CCGG	6 cut(s)	56, 479, 830, 842, 1977, 2350
Mva1269I	GAATGC	1 cut(s)	238
MwoI	GCNNNNNNNGC	4 cut(s)	71, 273, 562, 1395
NciI	CCSGG	1 cut(s)	830
NcoI	CCATGG	2 cut(s)	44, 2098
NdeII	GATC	7 cut(s)	446, 1531, 1585, 1640, 1742, 2072, 2590
NheI	GCTAGC	1 cut(s)	2378
NlaIV	GGNNCC	9 cut(s)	34, 94, 409, 771, 816, 951, 1975, 2234, 2565
NmeAIII	GCCGAG	1 cut(s)	121
NmuCI	GTSAC	1 cut(s)	246
NspI	RCATGY	1 cut(s)	2323
NspV	TTCGAA	1 cut(s)	1333
PaeR7I	CTCGAG	2 cut(s)	1505, 1951
PceI	AGGCCT	2 cut(s)	655, 1707
PciI	ACATGT	1 cut(s)	2319
PciSI	GCTCTTC	1 cut(s)	1488
PctI	GAATGC	1 cut(s)	238
PflMI	CCANNNNNTGG	2 cut(s)	404, 677
PfoI	TCCNGGA	1 cut(s)	715
PinAI	ACCGGT	2 cut(s)	478, 1976
PkrI	GCNGC	5 cut(s)	64, 195, 376, 2374, 2377
PleI	GAGTC	6 cut(s)	46, 106, 142, 1103, 1879, 2470
PpsI	GAGTC	6 cut(s)	46, 106, 142, 1103, 1879, 2470
PpuMI	RGGWCCY	2 cut(s)	719, 770
PscI	ACATGT	1 cut(s)	2319
PshAI	GACNNNNGTC	1 cut(s)	56
PshBI	ATTAAT	1 cut(s)	185
PsiI	TTATAA	1 cut(s)	866
Psp124BI	GAGCTC	3 cut(s)	21, 1506, 1686
Psp5II	RGGWCCY	2 cut(s)	719, 770
PspFI	CCCAGC	1 cut(s)	1027
PspN4I	GGNNCC	9 cut(s)	34, 94, 409, 771, 816, 951, 1975, 2234, 2565
PspPPI	RGGWCCY	2 cut(s)	719, 770
PspXI	VCTCGAGB	1 cut(s)	1505
PstNI	CAGNNNCTG	2 cut(s)	722, 1729
PsuI	RGATCY	3 cut(s)	446, 1640, 2072
PvuII	CAGCTG	1 cut(s)	2473
RsaI	GTAC	5 cut(s)	306, 357, 917, 997, 2213
RsaNI	GTAC	5 cut(s)	305, 356, 916, 996, 2212
RseI	CAYNNNNRTG	3 cut(s)	629, 1481, 2666
SacI	GAGCTC	3 cut(s)	21, 1506, 1686
SapI	GCTCTTC	1 cut(s)	1488
SaqAI	TTAA	7 cut(s)	185, 609, 803, 975, 984, 1359, 1374
SatI	GCNGC	5 cut(s)	63, 194, 375, 2373, 2376
Sau3AI	GATC	7 cut(s)	446, 1531, 1585, 1640, 1742, 2072, 2590
SchI	GAGTC	6 cut(s)	46, 107, 142, 1103, 1880, 2470
SduI	GDGCHC	4 cut(s)	21, 817, 1506, 1686
SfaNI	GCATC	3 cut(s)	1159, 1774, 2173
SfcI	CTRYAG	2 cut(s)	1104, 2416
Sfr274I	CTCGAG	2 cut(s)	1505, 1951
SfuI	TTCGAA	1 cut(s)	1333
SinI	GGWCC	9 cut(s)	32, 141, 407, 647, 680, 719, 770, 1188, 2066
SlaI	CTCGAG	2 cut(s)	1505, 1951
SmiMI	CAYNNNNRTG	3 cut(s)	629, 1481, 2666
SmlI	CTYRAG	4 cut(s)	661, 1505, 1792, 1951
SmoI	CTYRAG	4 cut(s)	661, 1505, 1792, 1951
SseBI	AGGCCT	2 cut(s)	655, 1707
SsiI	CCGC	5 cut(s)	63, 362, 749, 2123, 2230
SspI	AATATT	2 cut(s)	862, 2522
SspMI	CTAG	7 cut(s)	534, 651, 1499, 1991, 2183, 2379, 2396
SstI	GAGCTC	3 cut(s)	21, 1506, 1686
StuI	AGGCCT	2 cut(s)	655, 1707
StyI	CCWWGG	5 cut(s)	44, 650, 940, 1410, 2098
TaaI	ACNGT	5 cut(s)	1042, 1751, 1859, 1926, 2615
TaiI	ACGT	1 cut(s)	1837
TaqI	TCGA	5 cut(s)	1333, 1488, 1506, 1952, 2593
TatI	WGTACW	1 cut(s)	995
TauI	GCSGC	1 cut(s)	65
Tru1I	TTAA	7 cut(s)	185, 609, 803, 975, 984, 1359, 1374
Tru9I	TTAA	7 cut(s)	185, 609, 803, 975, 984, 1359, 1374
TscAI	CASTG	6 cut(s)	1029, 1180, 1864, 1870, 2133, 2275
TseFI	GTSAC	1 cut(s)	246
TseI	GCWGC	4 cut(s)	193, 374, 2372, 2375
Tsp45I	GTSAC	1 cut(s)	246
TspGWI	ACGGA	2 cut(s)	1081, 2621
TspRI	CASTG	6 cut(s)	1029, 1180, 1864, 1870, 2133, 2275
Van91I	CCANNNNNTGG	2 cut(s)	404, 677
VpaK11BI	GGWCC	9 cut(s)	32, 141, 407, 647, 680, 719, 770, 1188, 2066
VspI	ATTAAT	1 cut(s)	185
XapI	RAATTY	6 cut(s)	1231, 1354, 1804, 1825, 2345, 2438
XbaI	TCTAGA	2 cut(s)	533, 2182
XceI	RCATGY	1 cut(s)	2323
XcmI	CCANNNNNNNNNTGG	1 cut(s)	401
XhoI	CTCGAG	2 cut(s)	1505, 1951
XmaJI	CCTAGG	1 cut(s)	650
XmiI	GTMKAC	2 cut(s)	1340, 2610
XspI	CTAG	7 cut(s)	534, 651, 1499, 1991, 2183, 2379, 2396

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.