Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0003434

Physical Location & Seq

Genomic Coordinates Reverse (-)

50586878 .. 50595388

Gene Structure 8511 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G031120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2679 bp

ATGGTGATGGCTGAAACTGATGAGCTCAATGTGAATGGTCCCAAATCCCCGTGGAAGACTCCGGTGGCCGCCGAAGAAGCTCCCGTCAATGGCATGGGTGCCGAGTCCTGGCCTGCTCTGGCTGACGCCCAGGCCCATAGGTCCAAGACTCCCGACCTTGCCACTCCTCCGGGATTAATCTTGCAGCAAAAGACGAATCGGCCTGGAAACTCTAACGCTTCGCACAAGCATTCATCGTCACAATATCAAAAGACAGGCCCTAAACGCAATCCAAATGTTGCACCTCCTTTCCCAGTACCCTTACCTTACCATCAACCATCACTTCCACCTGTTTTTCATACTATGGTACATCCACCACACATTGCTGCTTCTGGTTATGCTTTCCAGCCATACCCTGGACCCATTGCAAATGTTGAAAATCATATAGCAAAATCTGGATCTGAGACCCCGGTGCAAGGTTTTGTGCAACCGGTTCAGCCCCATCCACGAGGTAATCCAAATGCTTATGGTGTCAATTTTTCTTCTAGAAGACCCAATATGCAAGAGCCTGGTGGGCCTGGTGGCCATTGGAATCATGCTTGGTATCAGCAACGACCATTTAATCCCAGAGAGAACATTCCTATGCAACAGGGGGTTGGACCTAGGCCTTTCTTGAGGCCTCCATTTTTTGGTCCAGCTCCAGGGTTCATGGTTGGCCCAACCATTCCAGGACCTGTCCCCATGTGCTATGTTCCAGTTCCGCCGACTGGTGCAATTAGGGGACCTCATCCTCCCCACTTTATGCCACATCCTTTAAATCCAGGGGCTCCATTACTACACCCGGAGACACATCCGGTAGCTTTGAGGGATAATATTATAAAACAAATAGAGTATTATTTTAGTGATGAAAATCTAAAGAGTGACAAGTACCTAATTTCATTGATGGATGACCAAGGGTGGGTGCCAGTAACCACTATTGCTGACTTTAAAAGGGTTAAGAAAATGTGTACAGACATGGCATTTATTCTTGATTCACTGCTGGGTTCAGCTACCGTTGAAGTGCAGGGCAACAAGATACGGAGACGAGTTGAGTGGTCAAAGTGGATTGCAACTTCTACAGACTCTACATCAAAACCGGCCCAACTTGAACAGAGGTCTATCAATGTTTTAGAGAATAGTGATGCCAGTGGTGATGGAAGGACCACTTGCGAGGAGAATGCTGAACTTTCATCATGTGAAAAGAATTTGATGGAGGACAAGCCATCAAATACCGAACATGGCCTTCATACTCTTGACATTGATGGTATATTACCAGAGTTGACTTGTAATAATGGTGATAAGATTCGAAAGTCTACTGCCAAATCAAATTTTAAGTCCTCATATCTTAAAACGAATCATTGCTCAGACTGCCCTGACCAATCCAAGGGAACTGAGCCTTCAGATATGGATATGAAGAATCTTGGTGGTCTGTCAAGTGATTTTGCAAACACATTTATGCTCGACGAAGAGCTAGAGCTCGAGCAGAAAATAATAAAAAAGGATGATCTCTATCCCAGTAGAAGGGTTGATGATGAAGATGATGAGATTGTCGTCCATGATCAGGATGTCCAGAGACTTGTAATTGTTACCAGGAATTGCAGAGTAGGTGAAGGATCTAAAACTGATGATAAGGAATCAAAAACCATTACCAATGAGCTCGCTTCTGCTATAAACGAAGGCCTCTATTTCTATGAGCAGGAACTGAAAACCAAGCGATCAAACCGTAAAAAGAACAACTCCAGTTACGAAAATAGAGATGCAGGCTCAAGAGTTTCAAATTTGGCCAAAGGATTTTCAAATTTGAAACGTGCTGAAATATCTGGCAGTAACAGTGGCACTGAAGAGTCTATAAGTGCTAATTCCCGAAAGAAGCATAGCAAAAACTTCCAAAATCAACAGTCATCCCATAGACAGCGATTCTTCTCGAGCAACTTTAGAAATTATGGAACTGGTCGGAACTCTCTAGGAATCATATCTGAAAGTCCACCAAGTAACTCAGTTGGATTTTTCTTTAGTTCCACACCACCTGAAAATCATGGTCCAAGATCTTCCAAGTTGAGTATTTCTCCCCATGGGGTTCTCTCAGGGAGCAGTCCGCCAGTGGGTTCTGTGCCAAAGTCATTTCCACCATTTCAGCATCCAAGTCATCAGCTTCTAGAAGAAAATGGTTTCAAACAGCAGAAGTACCTAAAGTATCACAAGCGGTGCCTAAATGACAGGAAGAAGTTGGGAATCGGTTGCAGTGAGGAAATGAATACTTTATATAGATTTTGGTCGTATTTCCTAAGAAACATGTTCAACTGCTCAATGTATGATGAGTTCCGGAAATATGCACTTGAAGACGCTGCTGCTAGCTATCATTATGGACTAGAGTGCCTATTCAGATTCTATAGTTATGGGTTGGAGAAGGAATTTAGAGATGACCTGTATGATGACTTTGAACAGCTGACTCTGGAGTTTTACCATAAAGGAAGTCTGTATGGCCTGGAAAAATATTGGGCATTTCATCATTATCGGGAAAAACGGGGTCAGAAGGAGCCTCTTAGAAAAAATCAAGAATTGGATCGATTGCTTAGGGAAGTATACCGTAGCTTGGATGATTTCCGTGCCAAAGAGAGGACTACAACAGCAATCACTACCATGAAAGAGAGGAGTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000932 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005844 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009266 GO:0009408 GO:0009628 GO:0009892 GO:0009987 GO:0010286 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0032991 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050896 GO:0060255 GO:0065007 GO:0071704 GO:0090304 GO:1901360 GO:1901361 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

892

Amino Acids

100.6

Weight (kDa)

8.23

Isoelectric Point (pI)

49.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
La	PF05383	285 - 339	5.4e-23	La domain
LARP1_HEAT	PF21071	719 - 866	2e-61	LARP1 HEAT repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003434)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G21160 AT5G21160 AT5G21160
fragaria_vesca	FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710 FvH4_3g27710
malus_domestica	MD00G1106400.v1.1 MD11G1183000.v1.1
prunus_persica	Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1 Prupe.6G155800_v2.0.a1
pyrus_communis	pycom5153684g00350
rosa_chinensis	RchiOBHm_Chr5g0050001
rosa_laevigata	RLG00000034676
rosa_multiflora	Rmu_sc0000333.1_g000023
rosa_roxburghii	Rroxscaffold_1G00031150
rosa_rugosa	Rorug05G0256500
rosa_samantha	Rh5AG329600 Rh5BG340300 Rh5CG366300 Rh5DG352900
rosa_wichuraiana	Rw5G031120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	857
AccB1I	GGYRCC	3 cut(s)	98, 940, 2223
AccB7I	CCANNNNNTGG	2 cut(s)	395, 668
AccI	GTMKAC	2 cut(s)	1331, 2601
AccIII	TCCGGA	1 cut(s)	2340
AciI	CCGC	4 cut(s)	69, 740, 2114, 2221
AclWI	GGATC	3 cut(s)	445, 1639, 2589
AcoI	YGGCCR	3 cut(s)	66, 562, 1800
AcsI	RAATTY	5 cut(s)	1222, 1345, 1795, 1816, 2429
AcuI	CTGAAG	2 cut(s)	1401, 1878
AcyI	GRCGYC	1 cut(s)	126
AfaI	GTAC	5 cut(s)	297, 348, 908, 988, 2204
AflIII	ACRYGT	1 cut(s)	2310
AgeI	ACCGGT	1 cut(s)	469
Alw21I	GWGCWC	3 cut(s)	27, 1497, 1677
Alw26I	GTCTC	4 cut(s)	437, 818, 1054, 1585
AlwI	GGATC	3 cut(s)	445, 1639, 2589
AlwNI	CAGNNNCTG	2 cut(s)	713, 1720
Ama87I	CYCGRG	2 cut(s)	1496, 1942
Aor13HI	TCCGGA	1 cut(s)	2340
ApeKI	GCWGC	4 cut(s)	184, 365, 2363, 2366
ApoI	RAATTY	5 cut(s)	1222, 1345, 1795, 1816, 2429
ArsI	GACNNNNNNTTYG	2 cut(s)	1337, 1369
AseI	ATTAAT	1 cut(s)	176
AsiGI	ACCGGT	1 cut(s)	469
AspA2I	CCTAGG	1 cut(s)	641
AsuC2I	CCSGG	3 cut(s)	171, 449, 821
AsuHPI	GGTGA	4 cut(s)	16, 1181, 1325, 1637
AsuII	TTCGAA	1 cut(s)	1324
AsuNHI	GCTAGC	1 cut(s)	2369
AvaI	CYCGRG	2 cut(s)	1496, 1942
AvaII	GGWCC	9 cut(s)	38, 141, 398, 638, 671, 710, 761, 1179, 2057
AvrII	CCTAGG	1 cut(s)	641
BalI	TGGCCA	2 cut(s)	564, 1802
BanI	GGYRCC	3 cut(s)	98, 940, 2223
BanII	GRGCYC	4 cut(s)	27, 808, 1497, 1677
BauI	CACGAG	1 cut(s)	486
BbsI	GAAGAC	3 cut(s)	62, 535, 2364
Bbv12I	GWGCWC	3 cut(s)	27, 1497, 1677
BbvI	GCAGC	4 cut(s)	196, 352, 2350, 2353
BccI	CCATC	8 cut(s)	318, 325, 489, 916, 1166, 1222, 1249, 1274
BcgI	CGANNNNNNTGC	2 cut(s)	1178, 1212
BclI	TGATCA	1 cut(s)	1576
BcnI	CCSGG	3 cut(s)	171, 449, 821
BcoDI	GTCTC	4 cut(s)	437, 818, 1054, 1585
BfaI	CTAG	7 cut(s)	525, 642, 1490, 1982, 2174, 2370, 2387
BfmI	CTRYAG	2 cut(s)	1095, 2407
BglI	GCCNNNNNGGC	1 cut(s)	553
BglII	AGATCT	1 cut(s)	2063
BisI	GCNGC	5 cut(s)	69, 185, 366, 2364, 2367
BlnI	CCTAGG	1 cut(s)	641
BlsI	GCNGC	5 cut(s)	70, 186, 367, 2365, 2368
Bme18I	GGWCC	9 cut(s)	38, 141, 398, 638, 671, 710, 761, 1179, 2057
BmeT110I	CYCGRG	2 cut(s)	1496, 1942
BmiI	GGNNCC	8 cut(s)	40, 100, 400, 762, 807, 942, 2225, 2556
BmrI	ACTGGG	2 cut(s)	287, 1527
BmsI	GCATC	3 cut(s)	1150, 1765, 2164
BmtI	GCTAGC	1 cut(s)	2373
BmuI	ACTGGG	2 cut(s)	287, 1527
BpiI	GAAGAC	3 cut(s)	62, 535, 2364
BplI	GAGNNNNNCTC	2 cut(s)	2068, 2100
BpmI	CTGGAG	3 cut(s)	663, 1741, 2492
Bpu10I	CCTNAGC	1 cut(s)	2591
Bpu14I	TTCGAA	1 cut(s)	1324
BpuEI	CTTGAG	2 cut(s)	673, 1768
BpuMI	CCSGG	3 cut(s)	171, 449, 821
Bsa29I	ATCGAT	1 cut(s)	2584
BsaBI	GATNNNNATC	2 cut(s)	888, 1527
BsaHI	GRCGYC	1 cut(s)	126
BsaI	GGTCTC	1 cut(s)	437
BsaWI	WCCGGW	4 cut(s)	61, 469, 832, 2340
Bse118I	RCCGGY	2 cut(s)	469, 1114
Bse1I	ACTGG	9 cut(s)	293, 734, 751, 944, 1164, 1533, 1758, 1972, 2117
Bse3DI	GCAATG	3 cut(s)	360, 402, 1375
Bse8I	GATNNNNATC	2 cut(s)	888, 1527
BseAI	TCCGGA	1 cut(s)	2340
BseCI	ATCGAT	1 cut(s)	2584
BseJI	GATNNNNATC	2 cut(s)	888, 1527
BseMI	GCAATG	3 cut(s)	360, 402, 1375
BseMII	CTCAG	5 cut(s)	432, 1395, 1401, 2028, 2115
BseNI	ACTGG	9 cut(s)	293, 734, 751, 944, 1164, 1533, 1758, 1972, 2117
BseRI	GAGGAG	2 cut(s)	156, 1205
BseXI	GCAGC	4 cut(s)	196, 352, 2350, 2353
BseYI	CCCAGC	1 cut(s)	1018
BsgI	GTGCAG	1 cut(s)	1061
BshNI	GGYRCC	3 cut(s)	98, 940, 2223
BshTI	ACCGGT	1 cut(s)	469
BshVI	ATCGAT	1 cut(s)	2584
BsiHKAI	GWGCWC	3 cut(s)	27, 1497, 1677
BsiHKCI	CYCGRG	2 cut(s)	1496, 1942
BsiSI	CCGG	8 cut(s)	62, 170, 449, 470, 821, 833, 1115, 2341
BslFI	GGGAC	3 cut(s)	24, 701, 774
BsmAI	GTCTC	4 cut(s)	437, 818, 1054, 1585
BsmBI	CGTCTC	1 cut(s)	1054
BsmFI	GGGAC	3 cut(s)	24, 701, 774
BsmI	GAATGC	2 cut(s)	229, 1201
Bso31I	GGTCTC	1 cut(s)	437
BsoBI	CYCGRG	2 cut(s)	1496, 1942
Bsp119I	TTCGAA	1 cut(s)	1324
Bsp1286I	GDGCHC	4 cut(s)	27, 808, 1497, 1677
Bsp13I	TCCGGA	1 cut(s)	2340
Bsp1407I	TGTACA	1 cut(s)	986
Bsp143I	GATC	7 cut(s)	437, 1522, 1576, 1631, 1733, 2063, 2581
Bsp19I	CCATGG	1 cut(s)	2089
BspACI	CCGC	4 cut(s)	69, 740, 2114, 2221
BspCNI	CTCAG	5 cut(s)	433, 1394, 1402, 2027, 2114
BspDI	ATCGAT	1 cut(s)	2584
BspEI	TCCGGA	1 cut(s)	2340
BspLI	GGNNCC	8 cut(s)	40, 100, 400, 762, 807, 942, 2225, 2556
BspOI	GCTAGC	1 cut(s)	2373
BspPI	GGATC	3 cut(s)	445, 1639, 2589
BspQI	GCTCTTC	1 cut(s)	1479
BspT104I	TTCGAA	1 cut(s)	1324
BspT107I	GGYRCC	3 cut(s)	98, 940, 2223
BspTNI	GGTCTC	1 cut(s)	437
BsrDI	GCAATG	3 cut(s)	360, 402, 1375
BsrFI	RCCGGY	2 cut(s)	469, 1114
BsrGI	TGTACA	1 cut(s)	986
BsrI	ACTGG	9 cut(s)	293, 734, 751, 944, 1164, 1533, 1758, 1972, 2117
BssAI	RCCGGY	2 cut(s)	469, 1114
BssMI	GATC	7 cut(s)	437, 1522, 1576, 1631, 1733, 2063, 2581
BssNAI	GTATAC	1 cut(s)	2602
BssNI	GRCGYC	1 cut(s)	126
BssSI	CACGAG	1 cut(s)	486
BssT1I	CCWWGG	4 cut(s)	641, 931, 1401, 2089
Bst1107I	GTATAC	1 cut(s)	2602
Bst2BI	CACGAG	1 cut(s)	486
Bst4CI	ACNGT	5 cut(s)	1033, 1742, 1850, 1917, 2606
Bst6I	CTCTTC	2 cut(s)	1479, 1854
BstACI	GRCGYC	1 cut(s)	126
BstAUI	TGTACA	1 cut(s)	986
BstBI	TTCGAA	1 cut(s)	1324
BstC8I	GCNNGC	4 cut(s)	114, 1677, 1780, 2371
BstDEI	CTNAG	8 cut(s)	441, 1381, 1410, 2014, 2101, 2303, 2561, 2591
BstDSI	CCRYGG	2 cut(s)	50, 2089
BstKTI	GATC	7 cut(s)	440, 1525, 1579, 1634, 1736, 2066, 2584
BstMAI	GTCTC	4 cut(s)	437, 818, 1054, 1585
BstMBI	GATC	7 cut(s)	437, 1522, 1576, 1631, 1733, 2063, 2581
BstMWI	GCNNNNNNNGC	4 cut(s)	77, 264, 553, 1386
BstNSI	RCATGY	1 cut(s)	2314
BstSFI	CTRYAG	2 cut(s)	1095, 2407
BstV1I	GCAGC	4 cut(s)	196, 352, 2350, 2353
BstV2I	GAAGAC	3 cut(s)	62, 535, 2364
BstX2I	RGATCY	3 cut(s)	437, 1631, 2063
BstYI	RGATCY	3 cut(s)	437, 1631, 2063
BstZ17I	GTATAC	1 cut(s)	2602
Bsu15I	ATCGAT	1 cut(s)	2584
BsuTUI	ATCGAT	1 cut(s)	2584
BtgI	CCRYGG	2 cut(s)	50, 2089
BtsI	GCAGTG	2 cut(s)	1013, 2266
BtsIMutI	CAGTG	6 cut(s)	1013, 1171, 1854, 1855, 2124, 2266
Cac8I	GCNNGC	4 cut(s)	114, 1677, 1780, 2371
CaiI	CAGNNNCTG	2 cut(s)	713, 1720
Cfr10I	RCCGGY	2 cut(s)	469, 1114
ClaI	ATCGAT	1 cut(s)	2584
CseI	GACGC	2 cut(s)	134, 2369
Csp6I	GTAC	5 cut(s)	296, 347, 907, 987, 2203
CspAI	ACCGGT	1 cut(s)	469
CviQI	GTAC	5 cut(s)	296, 347, 907, 987, 2203
DdeI	CTNAG	8 cut(s)	441, 1381, 1410, 2014, 2101, 2303, 2561, 2591
DpnI	GATC	7 cut(s)	439, 1524, 1578, 1633, 1735, 2065, 2583
DpnII	GATC	7 cut(s)	437, 1522, 1576, 1631, 1733, 2063, 2581
DraI	TTTAAA	2 cut(s)	795, 967
EaeI	YGGCCR	3 cut(s)	66, 562, 1800
Eam1104I	CTCTTC	2 cut(s)	1479, 1854
EarI	CTCTTC	2 cut(s)	1479, 1854
EciI	GGCGGA	2 cut(s)	729, 2103
Ecl136II	GAGCTC	3 cut(s)	25, 1495, 1675
Eco130I	CCWWGG	4 cut(s)	641, 931, 1401, 2089
Eco147I	AGGCCT	3 cut(s)	646, 658, 1698
Eco24I	GRGCYC	4 cut(s)	27, 808, 1497, 1677
Eco31I	GGTCTC	1 cut(s)	437
Eco47I	GGWCC	9 cut(s)	38, 141, 398, 638, 671, 710, 761, 1179, 2057
Eco53kI	GAGCTC	3 cut(s)	25, 1495, 1675
Eco57I	CTGAAG	2 cut(s)	1401, 1878
Eco88I	CYCGRG	2 cut(s)	1496, 1942
EcoICRI	GAGCTC	3 cut(s)	25, 1495, 1675
EcoO109I	RGGNCCY	3 cut(s)	257, 710, 761
EcoT14I	CCWWGG	4 cut(s)	641, 931, 1401, 2089
EcoT38I	GRGCYC	4 cut(s)	27, 808, 1497, 1677
ErhI	CCWWGG	4 cut(s)	641, 931, 1401, 2089
Esp3I	CGTCTC	1 cut(s)	1054
FalI	AAGNNNNNCTT	2 cut(s)	1168, 1200
FaqI	GGGAC	3 cut(s)	24, 701, 774
FbaI	TGATCA	1 cut(s)	1576
FblI	GTMKAC	2 cut(s)	1331, 2601
Fnu4HI	GCNGC	5 cut(s)	69, 185, 366, 2364, 2367
FriOI	GRGCYC	4 cut(s)	27, 808, 1497, 1677
Fsp4HI	GCNGC	5 cut(s)	69, 185, 366, 2364, 2367
FspBI	CTAG	7 cut(s)	525, 642, 1490, 1982, 2174, 2370, 2387
GluI	GCNGC	5 cut(s)	69, 185, 366, 2364, 2367
GsaI	CCCAGC	1 cut(s)	1022
GsuI	CTGGAG	3 cut(s)	663, 1741, 2492
HapII	CCGG	8 cut(s)	62, 170, 449, 470, 821, 833, 1115, 2341
HgaI	GACGC	2 cut(s)	134, 2369
Hin1I	GRCGYC	1 cut(s)	126
HincII	GTYRAC	1 cut(s)	1299
HindII	GTYRAC	1 cut(s)	1299
HpaII	CCGG	8 cut(s)	62, 170, 449, 470, 821, 833, 1115, 2341
HphI	GGTGA	4 cut(s)	16, 1181, 1325, 1637
Hpy166II	GTNNAC	5 cut(s)	987, 1299, 1332, 2003, 2602
Hpy188I	TCNGA	7 cut(s)	442, 1384, 1420, 1974, 1996, 2402, 2550
Hpy8I	GTNNAC	5 cut(s)	987, 1299, 1332, 2003, 2602
Hpy99I	CGWCG	1 cut(s)	1484
HpyAV	CCTTC	8 cut(s)	1170, 1271, 1425, 1533, 1622, 1688, 2419, 2545
HpyCH4III	ACNGT	5 cut(s)	1033, 1742, 1850, 1917, 2606
HpyCH4IV	ACGT	1 cut(s)	1825
HpyF10VI	GCNNNNNNNGC	4 cut(s)	77, 264, 553, 1386
HpyF3I	CTNAG	8 cut(s)	441, 1381, 1410, 2014, 2101, 2303, 2561, 2591
HpySE526I	ACGT	1 cut(s)	1825
Hsp92I	GRCGYC	1 cut(s)	126
Kpn2I	TCCGGA	1 cut(s)	2340
Ksp22I	TGATCA	1 cut(s)	1576
Kzo9I	GATC	7 cut(s)	437, 1522, 1576, 1631, 1733, 2063, 2581
LguI	GCTCTTC	1 cut(s)	1479
LmnI	GCTCC	5 cut(s)	85, 682, 811, 2106, 2554
Lsp1109I	GCAGC	4 cut(s)	196, 352, 2350, 2353
LweI	GCATC	3 cut(s)	1150, 1765, 2164
MaeI	CTAG	7 cut(s)	525, 642, 1490, 1982, 2174, 2370, 2387
MaeII	ACGT	1 cut(s)	1825
MaeIII	GTNAC	7 cut(s)	237, 899, 946, 1603, 1760, 1844, 2009
MalI	GATC	7 cut(s)	439, 1524, 1578, 1633, 1735, 2065, 2583
MboI	GATC	7 cut(s)	437, 1522, 1576, 1631, 1733, 2063, 2581
MflI	RGATCY	3 cut(s)	437, 1631, 2063
MhlI	GDGCHC	4 cut(s)	27, 808, 1497, 1677
MlsI	TGGCCA	2 cut(s)	564, 1802
MluNI	TGGCCA	2 cut(s)	564, 1802
MlyI	GAGTC	6 cut(s)	52, 113, 142, 1094, 1871, 2461
MmeI	TCCRAC	4 cut(s)	616, 1952, 1999, 2400
Mox20I	TGGCCA	2 cut(s)	564, 1802
MroI	TCCGGA	1 cut(s)	2340
MscI	TGGCCA	2 cut(s)	564, 1802
MseI	TTAA	7 cut(s)	176, 600, 794, 966, 975, 1350, 1365
MslI	CAYNNNNRTG	3 cut(s)	620, 1472, 2657
Msp20I	TGGCCA	2 cut(s)	564, 1802
MspA1I	CMGCKG	1 cut(s)	2464
MspI	CCGG	8 cut(s)	62, 170, 449, 470, 821, 833, 1115, 2341
Mva1269I	GAATGC	2 cut(s)	229, 1201
MwoI	GCNNNNNNNGC	4 cut(s)	77, 264, 553, 1386
NciI	CCSGG	3 cut(s)	171, 449, 821
NcoI	CCATGG	1 cut(s)	2089
NdeII	GATC	7 cut(s)	437, 1522, 1576, 1631, 1733, 2063, 2581
NheI	GCTAGC	1 cut(s)	2369
NlaIV	GGNNCC	8 cut(s)	40, 100, 400, 762, 807, 942, 2225, 2556
NmeAIII	GCCGAG	1 cut(s)	127
NmuCI	GTSAC	2 cut(s)	237, 899
NspI	RCATGY	1 cut(s)	2314
NspV	TTCGAA	1 cut(s)	1324
PaeR7I	CTCGAG	2 cut(s)	1496, 1942
PceI	AGGCCT	3 cut(s)	646, 658, 1698
PciI	ACATGT	1 cut(s)	2310
PciSI	GCTCTTC	1 cut(s)	1479
PctI	GAATGC	2 cut(s)	229, 1201
PflMI	CCANNNNNTGG	2 cut(s)	395, 668
PfoI	TCCNGGA	2 cut(s)	169, 706
PinAI	ACCGGT	1 cut(s)	469
PkrI	GCNGC	5 cut(s)	70, 186, 367, 2365, 2368
PleI	GAGTC	6 cut(s)	52, 112, 142, 1094, 1870, 2461
PpsI	GAGTC	6 cut(s)	52, 112, 142, 1094, 1870, 2461
PpuMI	RGGWCCY	2 cut(s)	710, 761
PscI	ACATGT	1 cut(s)	2310
PshBI	ATTAAT	1 cut(s)	176
PsiI	TTATAA	1 cut(s)	857
Psp124BI	GAGCTC	3 cut(s)	27, 1497, 1677
Psp5II	RGGWCCY	2 cut(s)	710, 761
PspFI	CCCAGC	1 cut(s)	1018
PspN4I	GGNNCC	8 cut(s)	40, 100, 400, 762, 807, 942, 2225, 2556
PspPPI	RGGWCCY	2 cut(s)	710, 761
PspXI	VCTCGAGB	1 cut(s)	1496
PsrI	GAACNNNNNNTAC	2 cut(s)	2321, 2353
PstNI	CAGNNNCTG	2 cut(s)	713, 1720
PsuI	RGATCY	3 cut(s)	437, 1631, 2063
PvuII	CAGCTG	1 cut(s)	2464
RsaI	GTAC	5 cut(s)	297, 348, 908, 988, 2204
RsaNI	GTAC	5 cut(s)	296, 347, 907, 987, 2203
RseI	CAYNNNNRTG	3 cut(s)	620, 1472, 2657
SacI	GAGCTC	3 cut(s)	27, 1497, 1677
SapI	GCTCTTC	1 cut(s)	1479
SaqAI	TTAA	7 cut(s)	176, 600, 794, 966, 975, 1350, 1365
SatI	GCNGC	5 cut(s)	69, 185, 366, 2364, 2367
Sau3AI	GATC	7 cut(s)	437, 1522, 1576, 1631, 1733, 2063, 2581
SchI	GAGTC	6 cut(s)	52, 113, 142, 1094, 1871, 2461
SduI	GDGCHC	4 cut(s)	27, 808, 1497, 1677
SfaNI	GCATC	3 cut(s)	1150, 1765, 2164
SfcI	CTRYAG	2 cut(s)	1095, 2407
Sfr274I	CTCGAG	2 cut(s)	1496, 1942
SfuI	TTCGAA	1 cut(s)	1324
SinI	GGWCC	9 cut(s)	38, 141, 398, 638, 671, 710, 761, 1179, 2057
SlaI	CTCGAG	2 cut(s)	1496, 1942
SmiMI	CAYNNNNRTG	3 cut(s)	620, 1472, 2657
SmlI	CTYRAG	4 cut(s)	652, 1496, 1783, 1942
SmoI	CTYRAG	4 cut(s)	652, 1496, 1783, 1942
SseBI	AGGCCT	3 cut(s)	646, 658, 1698
SsiI	CCGC	4 cut(s)	69, 740, 2114, 2221
SspI	AATATT	2 cut(s)	853, 2513
SspMI	CTAG	7 cut(s)	525, 642, 1490, 1982, 2174, 2370, 2387
SstI	GAGCTC	3 cut(s)	27, 1497, 1677
StuI	AGGCCT	3 cut(s)	646, 658, 1698
StyI	CCWWGG	4 cut(s)	641, 931, 1401, 2089
TaaI	ACNGT	5 cut(s)	1033, 1742, 1850, 1917, 2606
TaiI	ACGT	1 cut(s)	1828
TaqI	TCGA	5 cut(s)	1324, 1479, 1497, 1943, 2584
TatI	WGTACW	1 cut(s)	986
TauI	GCSGC	1 cut(s)	71
Tru1I	TTAA	7 cut(s)	176, 600, 794, 966, 975, 1350, 1365
Tru9I	TTAA	7 cut(s)	176, 600, 794, 966, 975, 1350, 1365
TscAI	CASTG	6 cut(s)	1020, 1171, 1855, 1861, 2124, 2266
TseFI	GTSAC	2 cut(s)	237, 899
TseI	GCWGC	4 cut(s)	184, 365, 2363, 2366
Tsp45I	GTSAC	2 cut(s)	237, 899
TspGWI	ACGGA	2 cut(s)	1072, 2612
TspRI	CASTG	6 cut(s)	1020, 1171, 1855, 1861, 2124, 2266
Van91I	CCANNNNNTGG	2 cut(s)	395, 668
VpaK11BI	GGWCC	9 cut(s)	38, 141, 398, 638, 671, 710, 761, 1179, 2057
VspI	ATTAAT	1 cut(s)	176
XapI	RAATTY	5 cut(s)	1222, 1345, 1795, 1816, 2429
XbaI	TCTAGA	2 cut(s)	524, 2173
XceI	RCATGY	1 cut(s)	2314
XcmI	CCANNNNNNNNNTGG	1 cut(s)	392
XhoI	CTCGAG	2 cut(s)	1496, 1942
XmaJI	CCTAGG	1 cut(s)	641
XmiI	GTMKAC	2 cut(s)	1331, 2601
XspI	CTAG	7 cut(s)	525, 642, 1490, 1982, 2174, 2370, 2387

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.