Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006001

Physical Location & Seq

Genomic Coordinates Reverse (-)

7367635 .. 7370295

Gene Structure 2661 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G22260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGGCGAATCTGATTCGAACAGACCATCAGCAACATATTCCAAAGAAGAGGAAGAGAGGGGAAAGTAGAGTTTTTAGGCTGAAGACGTTCGGAGAGTCTGGACATCCAGCTGAGATGAACGAGTTGTCTTTTCGAGATAACCTCGCTAAACTACTTGAGTTTGGTCACTTTGAGAGCTCCGGTCTAATGGGAAGTTGGTCTTTTCAGCTCGAGATTCAACGAAATCCAAATCCTCTCTATGTTCTTCTCTTTGTCGTAGAAGAGCCCATCGAAGCCTCTCTCAATCTCCGTTGCAACCATTGCCAATATGTTGGTTGGGGAAATCAAATGATATGCAACAAGAAGTACCATTTCGTGATCCCCTCAAAGGAAACAATGGCGGCTTTTTTAAAACTGGAAGGTGGAGGCTACGCTTTTCCCGAAAAGGAAAGTTTCTCCCATCTTGTGGAGCTTCAAGGCCATGTCCTTCACGGCTTCTTTCACTCCAACGGATTTGGTCACTTGCTCTCTCTCAACGGCATTGAAACCGGCTCCGACTTAACCGGTCATCAGGTCATGGATTTGTGGGACCGGCTCTGCACCGGTTTAAAGGCCAGGAAAATAGGGTTGAATGACGCGTCGCACAAAAAAGGAATGGAGTTGAGGCTGCTGCATGGGGTAGCAAAAGGAGAGCCATGGTTCGGTCGTTGGGGCTACCGGTTCGGGTCAGGGACATACGGAGTGACTCAAAAGATTTACGAGAAGGCACTTGAGTCGGTCCGTAACATACCCTTGTGCTTGCTTAACCATCACCTAACCAGCCTTAACCGAGAAACTCCAATCCTCTTGTCAAAGTACCAAAGTTTATCCACCGAGCCATTGATCACTCTCAGTGACCTCTTCAGGTTCATGCTTCATCTCCATTCACGTCTTCCAAGAGATAACTACATGAGTAACTCCCGAAACCAAATCATCTCCATTGATAGTACCAACTGCAGATGGTCTCAAAAACGGATCCAAATGGCTATCAAAGTGGTCATAGAGTCACTGAAAAGAGTCGAATACCGATGGATATCGAGACAAGAAGTGAGGGATGCAGCTAGAAATTACATTGGGGACACTGGTTTGCTTGATTTTGTGTTGAAGTCGCTTGGGAACCAGGTGGTTGGAAACTATTTGGTCCGACGTAGTCTAAATCCGGTGAAGAAAGTGCTAGAGTATTCCTTGGAGGATATATCAAATTTGTTACCAAGTAGTAACAATGAACTCATAACCCTTCAAAACCAAAACTCAATGGGGAAGATGGCGACAAACGGTCACAATAAGATCACAAGAGGTCAAGTTATGAAAGACATGTTTTATTTTTACAAACACATTCTCATGGACTACAAGGGAGTGTTAGGCCCCATAGGAGGTATATTGAACCAAATCGGAATGGCTTCAAGAGCAATCCTCGACGCTAAGTACTTCATCAAAGAGTATCACTACATTAGAGATACATCGGCGAAAACGTTACACTTAGATCGAGGGGAAGAATTAGGAATATTCTGCACGATCGCGTGGAAATGTCATCATCATAACAACGAGATAAAAGTTCCTCCACAAGAATGCATTGTAGTGAAGAAAGATGCAACATTGAGTGAAGTGTACGGAGAGGCAGAAAGAGTGTTTAGAGATATCTATTGGGAACTAAGAGACGTCGTGGTGGAGTCAGTGGTGGGTGGTCAAATAGAGATCACAAGGGTCGATGAAATGGCCTTGAATGGGAATAAGGGATTGGTGTTAGAAGGGAACGTAGGAATGATGATGAACATTGAAGTGACGAAATGTTATGAAGATGATGATAAAAAGAAGGATAAGAGAATAGAGTGTGAGTGTGGAGCAACGGAAGAAGATGGAGAGAGAATGGTGTGTTGTGATATTTGTGAAGTATGGCAACACACAAGGTGTGTTGGTGTTCAACACAATGAGGAAGTGCCTCGCATTTTTCTTTGTCAAAGTTGTGATCAACATCTTATTCCTCTCTCTTTTTTACCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009791 GO:0009846 GO:0009856 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0009987 GO:0010033 GO:0010208 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010927 GO:0010941 GO:0010942 GO:0014070 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0022607 GO:0030198 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032870 GO:0032989 GO:0033993 GO:0042221 GO:0043062 GO:0043067 GO:0043068 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044424 GO:0044464 GO:0044706 GO:0045229 GO:0045893 GO:0045935 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048444 GO:0048448 GO:0048466 GO:0048518 GO:0048522 GO:0048608 GO:0048646 GO:0048653 GO:0048654 GO:0048655 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051716 GO:0055046 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071396 GO:0071407 GO:0071495 GO:0071840 GO:0080090 GO:0085029 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD

Protein Analysis

672

Amino Acids

77.0

Weight (kDa)

7.82

Isoelectric Point (pI)

42.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_plant_repro	PF25874	326 - 404	2.5e-34	Winged helix-turn-helix domain in plant reproductive proteins
Ubiquitin_At1g33420	PF25565	504 - 590	3.3e-15	At1g33420-like, ubiquitin-like domain
PHD	PF00628	617 - 661	5.8e-06	PHD-finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006001)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22260
fragaria_vesca	FvH4_4g35820 FvH4_4g35830 FvH4_4g35830
malus_domestica	MD16G1012700.v1.1
prunus_persica	Prupe.1G338600_v2.0.a1
pyrus_communis	pycom16g01190
rosa_chinensis	RchiOBHm_Chr4g0445351 RchiOBHm_Chr4g0445361
rosa_laevigata	RLG00000005745 RLG00000005746
rosa_multiflora	Rmu_sc0000050.1_g000007 Rmu_sc0000050.1_g000008 Rmu_sc0000050.1_g000009
rosa_roxburghii	Rroxscaffold_5G00385870 Rroxscaffold_5G00385880
rosa_rugosa	Rorug04G0361000
rosa_samantha	Rh4AG422000 Rh4AG422100 Rh4BG434000 Rh4BG434100 Rh4CG448900 Rh4CG449000 Rh4DG430000 Rh4DG430100
rosa_wichuraiana	Rw4G036200 Rw4G036210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1680
AccB7I	CCANNNNNTGG	1 cut(s)	445
AccII	CGCG	2 cut(s)	617, 1538
AciI	CCGC	1 cut(s)	380
AclI	AACGTT	1 cut(s)	1490
AclWI	GGATC	3 cut(s)	352, 988, 1001
AcsI	RAATTY	1 cut(s)	1219
AcuI	CTGAAG	2 cut(s)	101, 865
AcyI	GRCGYC	1 cut(s)	1677
AdeI	CACNNNGTG	1 cut(s)	1926
AfaI	GTAC	5 cut(s)	347, 836, 967, 1445, 1628
AfiI	CCNNNNNNNGG	5 cut(s)	367, 445, 680, 1391, 1743
AflIII	ACRYGT	2 cut(s)	615, 1332
AgeI	ACCGGT	3 cut(s)	542, 581, 696
AhdI	GACNNNNNGTC	1 cut(s)	1293
AjiI	CACGTC	1 cut(s)	908
AjnI	CCWGG	2 cut(s)	593, 1137
AjuI	GAANNNNNNNTTGG	2 cut(s)	1739, 1771
AluBI	AGCT	5 cut(s)	110, 177, 208, 451, 1079
AluI	AGCT	5 cut(s)	110, 177, 208, 451, 1079
Alw21I	GWGCWC	1 cut(s)	179
Alw26I	GTCTC	3 cut(s)	987, 1051, 1668
AlwI	GGATC	3 cut(s)	352, 988, 1001
Ama87I	CYCGRG	1 cut(s)	209
AoxI	GGCC	4 cut(s)	457, 591, 1381, 1734
ApeKI	GCWGC	3 cut(s)	646, 649, 1076
ApoI	RAATTY	1 cut(s)	1219
AsiGI	ACCGGT	3 cut(s)	542, 581, 696
Asp700I	GAANNNNTTC	2 cut(s)	86, 1417
AspS9I	GGNCC	4 cut(s)	568, 757, 1159, 1382
AsuHPI	GGTGA	2 cut(s)	782, 1192
AsuII	TTCGAA	1 cut(s)	16
AvaI	CYCGRG	1 cut(s)	209
AvaII	GGWCC	3 cut(s)	568, 757, 1159
BamHI	GGATCC	1 cut(s)	993
BanII	GRGCYC	2 cut(s)	179, 267
BbsI	GAAGAC	2 cut(s)	89, 902
Bbv12I	GWGCWC	1 cut(s)	179
BbvI	GCAGC	3 cut(s)	633, 636, 1088
BccI	CCATC	8 cut(s)	33, 275, 447, 795, 972, 1041, 1276, 1868
BceAI	ACGGC	2 cut(s)	487, 532
BcgI	CGANNNNNNTGC	2 cut(s)	735, 769
BciT130I	CCWGG	2 cut(s)	595, 1139
BclI	TGATCA	2 cut(s)	861, 1984
BcoDI	GTCTC	3 cut(s)	987, 1051, 1668
BfaI	CTAG	2 cut(s)	1080, 1193
BfmI	CTRYAG	1 cut(s)	973
BisI	GCNGC	4 cut(s)	381, 647, 650, 1077
BlsI	GCNGC	4 cut(s)	382, 648, 651, 1078
BmcAI	AGTACT	1 cut(s)	1445
Bme1390I	CCNGG	2 cut(s)	595, 1139
Bme18I	GGWCC	3 cut(s)	568, 757, 1159
BmeRI	GACNNNNNGTC	1 cut(s)	1293
BmeT110I	CYCGRG	1 cut(s)	209
BmgBI	CACGTC	1 cut(s)	908
BmgT120I	GGNCC	4 cut(s)	568, 757, 1159, 1382
BmiI	GGNNCC	5 cut(s)	532, 569, 995, 1136, 1384
BmrFI	CCNGG	2 cut(s)	595, 1139
BmsI	GCATC	2 cut(s)	1063, 1597
BpiI	GAAGAC	2 cut(s)	89, 902
BplI	GAGNNNNNCTC	4 cut(s)	126, 158, 1416, 1448
Bpu14I	TTCGAA	1 cut(s)	16
BpuEI	CTTGAG	2 cut(s)	176, 770
BsaBI	GATNNNNATC	2 cut(s)	1051, 1989
BsaHI	GRCGYC	1 cut(s)	1677
BsaI	GGTCTC	1 cut(s)	987
BsaJI	CCNNGG	2 cut(s)	674, 1203
BsaWI	WCCGGW	5 cut(s)	179, 542, 581, 696, 1177
Bsc4I	CCNNNNNNNGG	5 cut(s)	367, 445, 680, 1391, 1743
Bse118I	RCCGGY	5 cut(s)	527, 542, 570, 581, 696
Bse1I	ACTGG	2 cut(s)	399, 1105
Bse3DI	GCAATG	1 cut(s)	298
Bse8I	GATNNNNATC	2 cut(s)	1051, 1989
BseBI	CCWGG	2 cut(s)	595, 1139
BseDI	CCNNGG	2 cut(s)	674, 1203
BseGI	GGATG	2 cut(s)	103, 1078
BseJI	GATNNNNATC	2 cut(s)	1051, 1989
BseLI	CCNNNNNNNGG	5 cut(s)	367, 445, 680, 1391, 1743
BseMI	GCAATG	1 cut(s)	298
BseMII	CTCAG	2 cut(s)	102, 883
BseNI	ACTGG	2 cut(s)	399, 1105
BseXI	GCAGC	3 cut(s)	633, 636, 1088
BsgI	GTGCAG	2 cut(s)	562, 1513
Bsh1236I	CGCG	2 cut(s)	617, 1538
Bsh1285I	CGRYCG	2 cut(s)	685, 1536
BshFI	GGCC	4 cut(s)	459, 593, 1383, 1736
BshTI	ACCGGT	3 cut(s)	542, 581, 696
BsiEI	CGRYCG	2 cut(s)	685, 1536
BsiHKAI	GWGCWC	1 cut(s)	179
BsiHKCI	CYCGRG	1 cut(s)	209
BsiSI	CCGG	7 cut(s)	180, 528, 543, 571, 582, 697, 1178
BslFI	GGGAC	3 cut(s)	581, 724, 1109
BslI	CCNNNNNNNGG	5 cut(s)	367, 445, 680, 1391, 1743
BsmAI	GTCTC	3 cut(s)	987, 1051, 1668
BsmBI	CGTCTC	1 cut(s)	1668
BsmFI	GGGAC	3 cut(s)	581, 724, 1109
BsmI	GAATGC	1 cut(s)	1592
BsnI	GGCC	4 cut(s)	459, 593, 1383, 1736
Bso31I	GGTCTC	1 cut(s)	987
BsoBI	CYCGRG	1 cut(s)	209
Bsp119I	TTCGAA	1 cut(s)	16
Bsp1286I	GDGCHC	2 cut(s)	179, 267
Bsp143I	GATC	8 cut(s)	357, 861, 993, 1305, 1501, 1533, 1713, 1984
Bsp19I	CCATGG	1 cut(s)	674
BspACI	CCGC	1 cut(s)	380
BspANI	GGCC	4 cut(s)	459, 593, 1383, 1736
BspCNI	CTCAG	2 cut(s)	103, 882
BspFNI	CGCG	2 cut(s)	617, 1538
BspLI	GGNNCC	5 cut(s)	532, 569, 995, 1136, 1384
BspMAI	CTGCAG	1 cut(s)	977
BspPI	GGATC	3 cut(s)	352, 988, 1001
BspQI	GCTCTTC	1 cut(s)	255
BspT104I	TTCGAA	1 cut(s)	16
BspTNI	GGTCTC	1 cut(s)	987
BsrDI	GCAATG	1 cut(s)	298
BsrFI	RCCGGY	5 cut(s)	527, 542, 570, 581, 696
BsrI	ACTGG	2 cut(s)	399, 1105
BssAI	RCCGGY	5 cut(s)	527, 542, 570, 581, 696
BssECI	CCNNGG	2 cut(s)	674, 1203
BssMI	GATC	8 cut(s)	357, 861, 993, 1305, 1501, 1533, 1713, 1984
BssNI	GRCGYC	1 cut(s)	1677
BssT1I	CCWWGG	2 cut(s)	674, 1203
Bst2UI	CCWGG	2 cut(s)	595, 1139
Bst4CI	ACNGT	1 cut(s)	1295
Bst6I	CTCTTC	4 cut(s)	41, 47, 255, 884
BstACI	GRCGYC	1 cut(s)	1677
BstAPI	GCANNNNNTGC	1 cut(s)	300
BstBI	TTCGAA	1 cut(s)	16
BstC8I	GCNNGC	1 cut(s)	779
BstDEI	CTNAG	5 cut(s)	111, 869, 1440, 1498, 1670
BstDSI	CCRYGG	1 cut(s)	674
BstF5I	GGATG	2 cut(s)	103, 1078
BstFNI	CGCG	2 cut(s)	617, 1538
BstKTI	GATC	8 cut(s)	360, 864, 996, 1308, 1504, 1536, 1716, 1987
BstMAI	GTCTC	3 cut(s)	987, 1051, 1668
BstMBI	GATC	8 cut(s)	357, 861, 993, 1305, 1501, 1533, 1713, 1984
BstMCI	CGRYCG	2 cut(s)	685, 1536
BstMWI	GCNNNNNNNGC	2 cut(s)	300, 1424
BstNI	CCWGG	2 cut(s)	595, 1139
BstNSI	RCATGY	1 cut(s)	1336
BstSCI	CCNGG	2 cut(s)	593, 1137
BstSFI	CTRYAG	1 cut(s)	973
BstUI	CGCG	2 cut(s)	617, 1538
BstV1I	GCAGC	3 cut(s)	633, 636, 1088
BstV2I	GAAGAC	2 cut(s)	89, 902
BstX2I	RGATCY	1 cut(s)	993
BstXI	CCANNNNNNTGG	2 cut(s)	311, 1145
BstYI	RGATCY	1 cut(s)	993
BsuRI	GGCC	4 cut(s)	459, 593, 1383, 1736
BtgI	CCRYGG	1 cut(s)	674
BtrI	CACGTC	1 cut(s)	908
BtsCI	GGATG	2 cut(s)	103, 1078
BtsIMutI	CAGTG	4 cut(s)	877, 1025, 1098, 1698
Cac8I	GCNNGC	1 cut(s)	779
Cfr10I	RCCGGY	5 cut(s)	527, 542, 570, 581, 696
Cfr13I	GGNCC	4 cut(s)	568, 757, 1159, 1382
CpoI	CGGWCCG	1 cut(s)	757
CseI	GACGC	3 cut(s)	606, 623, 1445
CsiI	ACCWGGT	1 cut(s)	1137
Csp6I	GTAC	5 cut(s)	346, 835, 966, 1444, 1627
CspAI	ACCGGT	3 cut(s)	542, 581, 696
CspI	CGGWCCG	1 cut(s)	757
CviAII	CATG	8 cut(s)	461, 556, 653, 675, 889, 928, 1333, 1360
CviQI	GTAC	5 cut(s)	346, 835, 966, 1444, 1627
DdeI	CTNAG	5 cut(s)	111, 869, 1440, 1498, 1670
DpnI	GATC	8 cut(s)	359, 863, 995, 1307, 1503, 1535, 1715, 1986
DpnII	GATC	8 cut(s)	357, 861, 993, 1305, 1501, 1533, 1713, 1984
DraI	TTTAAA	2 cut(s)	390, 588
DraIII	CACNNNGTG	1 cut(s)	1926
DriI	GACNNNNNGTC	1 cut(s)	1293
Eam1104I	CTCTTC	4 cut(s)	41, 47, 255, 884
Eam1105I	GACNNNNNGTC	1 cut(s)	1293
EarI	CTCTTC	4 cut(s)	41, 47, 255, 884
Ecl136II	GAGCTC	1 cut(s)	177
Eco130I	CCWWGG	2 cut(s)	674, 1203
Eco24I	GRGCYC	2 cut(s)	179, 267
Eco31I	GGTCTC	1 cut(s)	987
Eco32I	GATATC	2 cut(s)	1053, 1657
Eco47I	GGWCC	3 cut(s)	568, 757, 1159
Eco53kI	GAGCTC	1 cut(s)	177
Eco57I	CTGAAG	2 cut(s)	101, 865
Eco88I	CYCGRG	1 cut(s)	209
EcoICRI	GAGCTC	1 cut(s)	177
EcoO109I	RGGNCCY	1 cut(s)	1382
EcoRII	CCWGG	2 cut(s)	593, 1137
EcoRV	GATATC	2 cut(s)	1053, 1657
EcoT14I	CCWWGG	2 cut(s)	674, 1203
EcoT22I	ATGCAT	1 cut(s)	1592
EcoT38I	GRGCYC	2 cut(s)	179, 267
ErhI	CCWWGG	2 cut(s)	674, 1203
Esp3I	CGTCTC	1 cut(s)	1668
FaeI	CATG	8 cut(s)	464, 559, 656, 678, 892, 931, 1336, 1363
FalI	AAGNNNNNCTT	2 cut(s)	184, 216
FaqI	GGGAC	3 cut(s)	581, 724, 1109
FatI	CATG	8 cut(s)	460, 555, 652, 674, 888, 927, 1332, 1359
FbaI	TGATCA	2 cut(s)	861, 1984
Fnu4HI	GCNGC	4 cut(s)	381, 647, 650, 1077
FokI	GGATG	2 cut(s)	90, 1085
FriOI	GRGCYC	2 cut(s)	179, 267
Fsp4HI	GCNGC	4 cut(s)	381, 647, 650, 1077
FspBI	CTAG	2 cut(s)	1080, 1193
GluI	GCNGC	4 cut(s)	381, 647, 650, 1077
HaeIII	GGCC	4 cut(s)	459, 593, 1383, 1736
HapII	CCGG	7 cut(s)	180, 528, 543, 571, 582, 697, 1178
HgaI	GACGC	3 cut(s)	606, 623, 1445
Hin1I	GRCGYC	1 cut(s)	1677
Hin1II	CATG	8 cut(s)	464, 559, 656, 678, 892, 931, 1336, 1363
HinfI	GANTC	9 cut(s)	7, 13, 95, 214, 724, 752, 1022, 1035, 1688
HpaII	CCGG	7 cut(s)	180, 528, 543, 571, 582, 697, 1178
HphI	GGTGA	2 cut(s)	782, 1192
Hpy166II	GTNNAC	1 cut(s)	1627
Hpy188I	TCNGA	5 cut(s)	12, 92, 535, 1163, 1412
Hpy188III	TCNNGA	8 cut(s)	99, 134, 211, 355, 419, 939, 1056, 1422
Hpy8I	GTNNAC	1 cut(s)	1627
Hpy99I	CGWCG	4 cut(s)	622, 1167, 1439, 1682
HpyAV	CCTTC	6 cut(s)	392, 476, 736, 1265, 1760, 1825
HpyCH4III	ACNGT	1 cut(s)	1295
HpyCH4IV	ACGT	6 cut(s)	86, 907, 1165, 1490, 1677, 1773
HpyCH4V	TGCA	9 cut(s)	294, 336, 579, 652, 975, 1076, 1530, 1590, 1610
HpyF10VI	GCNNNNNNNGC	2 cut(s)	300, 1424
HpyF3I	CTNAG	5 cut(s)	111, 869, 1440, 1498, 1670
HpySE526I	ACGT	6 cut(s)	86, 907, 1165, 1490, 1677, 1773
Hsp92I	GRCGYC	1 cut(s)	1677
Hsp92II	CATG	8 cut(s)	464, 559, 656, 678, 892, 931, 1336, 1363
Ksp22I	TGATCA	2 cut(s)	861, 1984
Kzo9I	GATC	8 cut(s)	357, 861, 993, 1305, 1501, 1533, 1713, 1984
LguI	GCTCTTC	1 cut(s)	255
LmnI	GCTCC	4 cut(s)	182, 448, 536, 1859
Lsp1109I	GCAGC	3 cut(s)	633, 636, 1088
LweI	GCATC	2 cut(s)	1063, 1597
MabI	ACCWGGT	1 cut(s)	1137
MaeI	CTAG	2 cut(s)	1080, 1193
MaeII	ACGT	6 cut(s)	86, 907, 1165, 1490, 1677, 1773
MalI	GATC	8 cut(s)	359, 863, 995, 1307, 1503, 1535, 1715, 1986
MboI	GATC	8 cut(s)	357, 861, 993, 1305, 1501, 1533, 1713, 1984
MflI	RGATCY	1 cut(s)	993
MhlI	GDGCHC	2 cut(s)	179, 267
MluCI	AATT	3 cut(s)	1084, 1219, 1514
MluI	ACGCGT	1 cut(s)	615
MlyI	GAGTC	6 cut(s)	104, 718, 761, 1031, 1044, 1697
MmeI	TCCRAC	4 cut(s)	510, 558, 1126, 1186
Mph1103I	ATGCAT	1 cut(s)	1592
MroXI	GAANNNNTTC	2 cut(s)	86, 1417
MseI	TTAA	5 cut(s)	389, 539, 587, 783, 804
MslI	CAYNNNNRTG	4 cut(s)	1358, 1585, 1595, 1796
MspA1I	CMGCKG	1 cut(s)	110
MspI	CCGG	7 cut(s)	180, 528, 543, 571, 582, 697, 1178
MspR9I	CCNGG	2 cut(s)	595, 1139
Mva1269I	GAATGC	1 cut(s)	1592
MvaI	CCWGG	2 cut(s)	595, 1139
MvnI	CGCG	2 cut(s)	617, 1538
MwoI	GCNNNNNNNGC	2 cut(s)	300, 1424
NcoI	CCATGG	1 cut(s)	674
NdeII	GATC	8 cut(s)	357, 861, 993, 1305, 1501, 1533, 1713, 1984
NlaIII	CATG	8 cut(s)	464, 559, 656, 678, 892, 931, 1336, 1363
NlaIV	GGNNCC	5 cut(s)	532, 569, 995, 1136, 1384
NmuCI	GTSAC	7 cut(s)	164, 497, 721, 872, 1023, 1295, 1798
NsiI	ATGCAT	1 cut(s)	1592
NspI	RCATGY	1 cut(s)	1336
NspV	TTCGAA	1 cut(s)	16
PaeR7I	CTCGAG	1 cut(s)	209
PciI	ACATGT	1 cut(s)	1332
PciSI	GCTCTTC	1 cut(s)	255
PcsI	WCGNNNNNNNCGW	2 cut(s)	417, 1487
PctI	GAATGC	1 cut(s)	1592
PdmI	GAANNNNTTC	2 cut(s)	86, 1417
PfeI	GAWTC	3 cut(s)	7, 13, 214
PflFI	GACNNNGTC	1 cut(s)	1167
PflMI	CCANNNNNTGG	1 cut(s)	445
PinAI	ACCGGT	3 cut(s)	542, 581, 696
PkrI	GCNGC	4 cut(s)	382, 648, 651, 1078
Ple19I	CGATCG	1 cut(s)	1536
PleI	GAGTC	6 cut(s)	103, 718, 760, 1030, 1043, 1696
PpsI	GAGTC	6 cut(s)	103, 718, 760, 1030, 1043, 1696
PscI	ACATGT	1 cut(s)	1332
Psp124BI	GAGCTC	1 cut(s)	179
Psp1406I	AACGTT	1 cut(s)	1490
Psp6I	CCWGG	2 cut(s)	593, 1137
PspGI	CCWGG	2 cut(s)	593, 1137
PspN4I	GGNNCC	5 cut(s)	532, 569, 995, 1136, 1384
PspPI	GGNCC	4 cut(s)	568, 757, 1159, 1382
PstI	CTGCAG	1 cut(s)	977
PsuI	RGATCY	1 cut(s)	993
PsyI	GACNNNGTC	1 cut(s)	1167
PvuI	CGATCG	1 cut(s)	1536
PvuII	CAGCTG	1 cut(s)	110
RsaI	GTAC	5 cut(s)	347, 836, 967, 1445, 1628
RsaNI	GTAC	5 cut(s)	346, 835, 966, 1444, 1627
RseI	CAYNNNNRTG	4 cut(s)	1358, 1585, 1595, 1796
Rsr2I	CGGWCCG	1 cut(s)	757
RsrII	CGGWCCG	1 cut(s)	757
SacI	GAGCTC	1 cut(s)	179
SapI	GCTCTTC	1 cut(s)	255
SaqAI	TTAA	5 cut(s)	389, 539, 587, 783, 804
SatI	GCNGC	4 cut(s)	381, 647, 650, 1077
Sau3AI	GATC	8 cut(s)	357, 861, 993, 1305, 1501, 1533, 1713, 1984
Sau96I	GGNCC	4 cut(s)	568, 757, 1159, 1382
ScaI	AGTACT	1 cut(s)	1445
SchI	GAGTC	6 cut(s)	104, 718, 761, 1031, 1044, 1697
ScrFI	CCNGG	2 cut(s)	595, 1139
SduI	GDGCHC	2 cut(s)	179, 267
SexAI	ACCWGGT	1 cut(s)	1137
SfaNI	GCATC	2 cut(s)	1063, 1597
SfcI	CTRYAG	1 cut(s)	973
Sfr274I	CTCGAG	1 cut(s)	209
SfuI	TTCGAA	1 cut(s)	16
SinI	GGWCC	3 cut(s)	568, 757, 1159
SlaI	CTCGAG	1 cut(s)	209
SmiMI	CAYNNNNRTG	4 cut(s)	1358, 1585, 1595, 1796
SmlI	CTYRAG	3 cut(s)	155, 209, 749
SmoI	CTYRAG	3 cut(s)	155, 209, 749
Sse9I	AATT	3 cut(s)	1084, 1219, 1514
SsiI	CCGC	1 cut(s)	380
SspI	AATATT	1 cut(s)	1524
SspMI	CTAG	2 cut(s)	1080, 1193
SstI	GAGCTC	1 cut(s)	179
StyD4I	CCNGG	2 cut(s)	593, 1137
StyI	CCWWGG	2 cut(s)	674, 1203
TaaI	ACNGT	1 cut(s)	1295
TaiI	ACGT	6 cut(s)	89, 910, 1168, 1493, 1680, 1776
TaqI	TCGA	9 cut(s)	16, 133, 210, 270, 1038, 1055, 1434, 1504, 1725
TaqII	GACCGA	2 cut(s)	671, 745
TasI	AATT	3 cut(s)	1084, 1219, 1514
TatI	WGTACW	1 cut(s)	1443
TauI	GCSGC	1 cut(s)	383
TfiI	GAWTC	3 cut(s)	7, 13, 214
Tru1I	TTAA	5 cut(s)	389, 539, 587, 783, 804
Tru9I	TTAA	5 cut(s)	389, 539, 587, 783, 804
TscAI	CASTG	4 cut(s)	877, 1032, 1105, 1698
TseFI	GTSAC	7 cut(s)	164, 497, 721, 872, 1023, 1295, 1798
TseI	GCWGC	3 cut(s)	646, 649, 1076
Tsp45I	GTSAC	7 cut(s)	164, 497, 721, 872, 1023, 1295, 1798
TspDTI	ATGAA	9 cut(s)	131, 877, 884, 1257, 1340, 1438, 1743, 1802, 1827
TspGWI	ACGGA	7 cut(s)	278, 504, 732, 749, 1006, 1644, 1880
TspRI	CASTG	4 cut(s)	877, 1032, 1105, 1698
Tth111I	GACNNNGTC	1 cut(s)	1167
Van91I	CCANNNNNTGG	1 cut(s)	445
VpaK11BI	GGWCC	3 cut(s)	568, 757, 1159
XapI	RAATTY	1 cut(s)	1219
XceI	RCATGY	1 cut(s)	1336
XhoI	CTCGAG	1 cut(s)	209
XmnI	GAANNNNTTC	2 cut(s)	86, 1417
XspI	CTAG	2 cut(s)	1080, 1193
ZraI	GACGTC	1 cut(s)	1678
ZrmI	AGTACT	1 cut(s)	1445
Zsp2I	ATGCAT	1 cut(s)	1592

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.