Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0006001

Physical Location & Seq

Genomic Coordinates Forward (+)

64869206 .. 64872235

Gene Structure 3030 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00385880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1428 bp

ATGTTGGCCAACAACAACCACACCAACACTAGTGCCTCCTCTGCTGCTCCTTCTTCTTCCTCTGATCATCATCATGCCTTCACTCCCTTAGAAAATGGAGCAGCAGCAGCAGCAGCGACAGCCACAAACAAAAGAAAACGCCGACCGGCCGGCACCCCAGATCCGGATGCGGAAGTGGTGTCTCTCTCCCCGAAAACGTTACTGGAGTCAGACCGTTACGTGTGCGAGATCTGTAACCAGGGGTTCCAGAGAGACCAGAATCTGCAGATGCACAGAAGAAGGCACAAGGTGCCGTGGAAGTTGCTGAAGCGGGAAATACAGGATCAGGTGAAGAAGAGGGTGTTTGTGTGCCCGGAGCCGAGCTGCCTCCACCACGACCCTTGCCATGCGCTCGGCGATCTCGTCGGAATCAAGAAGCACTTCCGGCGAAAGCACAGCAACCACAAGCAATGGGTGTGCGACAAGTGCTCCAAAGGTTACGCCGTACAATCCGATTACAAGGCCCATCTCAAAACCTGTGGCACCAGAGGACATTCCTGCGACTGTGGTCGTGTGTTTTCCAGAGTGGAGAGTTTCATTGAGCACCAAGACACTTGCAGCGTGCGACATGTTGTCCGGCCAGAATTGCAGGCACTTCAGCCGGCGGCGGCCTGCTCATCACGAACAGCGTCGAGCACCAGCCCCTCCAGCGACGGCCATTTCAGCATTAATAATAACAACAATGCAGCTCCTCCATTGCCCGGATTACCAGTAATGCCAAAGCTAAATGACCAACCTGTTGTGTTTATAAGCTCTCATGAGGGGCATGATGGTAATCCTTCCACTTCTAACCACCAACACCAACAGCCACGAGAACAAGAGCAAGAGCATATGCTGGAACTTAAACTCCTTCCATCGTCGGACACACAAACCTCCCCTCGAAACGAAGACGAAAACTATGCAACGCATTTGAAGCTTTCCATAGGCGGCTCATCACGCGGTGGTGATCAAAAGAATGATTCGCCACGAAGCTCATCAAAAGAAATGAACACAAACATTGGTTTTGGTGGTGGAGCAAGTCGGGAAGTGGCGAGGTTGAAAGACTTTGCCTCCGAGGAGTTGAAGTTGGCCATGGCGGAAAGGGCCTACGCCGAAGACGCTAGACGAGAAGCCAAGCGGCAAATAGAGATGGCCGAGCTGGAGTTCGCAAACGCAAAGAGGATCAGGCAACAAGCGCAGGCGGAGCTTCAAAAGGCTCAGCTACTAAAAGAGCAATCCACCAAGAAAATTAGCTCCGCCATTATGCAAATCACTTGTCCATCTTGCAAGCAACACTTCCATGCGAGTAATCCTAGTAACGCAGTTGGAGTGGGACCCTCCGACGAGACGACCTCCCTCGGCATGAGTTACATGTCCTCCGCCACAACCGAAGGAGAAGGAGAACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006109 GO:0006355 GO:0007275 GO:0008150 GO:0009581 GO:0009582 GO:0009590 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0009959 GO:0009965 GO:0010016 GO:0010031 GO:0010468 GO:0010556 GO:0010600 GO:0010601 GO:0010675 GO:0010817 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032350 GO:0032352 GO:0032501 GO:0032502 GO:0032879 GO:0032881 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043621 GO:0044212 GO:0044424 GO:0044464 GO:0046885 GO:0046886 GO:0046982 GO:0046983 GO:0048366 GO:0048367 GO:0048437 GO:0048444 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050879 GO:0050896 GO:0051049 GO:0051171 GO:0051252 GO:0051606 GO:0060255 GO:0061458 GO:0065007 GO:0065008 GO:0080090 GO:0090354 GO:0090355 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:2000012 GO:2000112 GO:2000904 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2H2 zf-met

Protein Analysis

475

Amino Acids

52.32

Weight (kDa)

8.57

Isoelectric Point (pI)

65.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2H2-2nd_BIRD-IDD	PF22996	111 - 145	4.6e-18	BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD	PF22995	150 - 174	4.1e-14	BIRD-IDD transcription factor, third C2HC zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006001)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22260
fragaria_vesca	FvH4_4g35820 FvH4_4g35830 FvH4_4g35830
malus_domestica	MD16G1012700.v1.1
prunus_persica	Prupe.1G338600_v2.0.a1
pyrus_communis	pycom16g01190
rosa_chinensis	RchiOBHm_Chr4g0445351 RchiOBHm_Chr4g0445361
rosa_laevigata	RLG00000005745 RLG00000005746
rosa_multiflora	Rmu_sc0000050.1_g000007 Rmu_sc0000050.1_g000008 Rmu_sc0000050.1_g000009
rosa_roxburghii	Rroxscaffold_5G00385870 Rroxscaffold_5G00385880
rosa_rugosa	Rorug04G0361000
rosa_samantha	Rh4AG422000 Rh4AG422100 Rh4BG434000 Rh4BG434100 Rh4CG448900 Rh4CG449000 Rh4DG430000 Rh4DG430100
rosa_wichuraiana	Rw4G036200 Rw4G036210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	788
AccB1I	GGYRCC	3 cut(s)	152, 289, 521
AccII	CGCG	1 cut(s)	978
AccIII	TCCGGA	1 cut(s)	163
AclI	AACGTT	1 cut(s)	197
AclWI	GGATC	3 cut(s)	155, 330, 1208
AcoI	YGGCCR	6 cut(s)	6, 147, 617, 694, 1107, 1170
AcuI	CTGAAG	2 cut(s)	326, 620
AdeI	CACNNNGTG	2 cut(s)	289, 980
AfaI	GTAC	1 cut(s)	486
AfiI	CCNNNNNNNGG	2 cut(s)	163, 740
AflIII	ACRYGT	3 cut(s)	219, 607, 1389
AgsI	TTSAA	4 cut(s)	952, 1078, 1102, 1229
AhdI	GACNNNNNGTC	1 cut(s)	611
AhlI	ACTAGT	1 cut(s)	29
AjnI	CCWGG	1 cut(s)	237
AloI	GAACNNNNNNTCC	2 cut(s)	870, 902
Alw21I	GWGCWC	3 cut(s)	470, 585, 677
Alw26I	GTCTC	3 cut(s)	186, 246, 1358
AlwI	GGATC	3 cut(s)	155, 330, 1208
AlwNI	CAGNNNCTG	1 cut(s)	262
Aor13HI	TCCGGA	1 cut(s)	163
AoxI	GGCC	9 cut(s)	6, 147, 501, 617, 648, 694, 1107, 1122, 1170
ApeKI	GCWGC	9 cut(s)	44, 101, 104, 107, 110, 113, 363, 597, 725
ArsI	GACNNNNNNTTYG	2 cut(s)	1279, 1311
AseI	ATTAAT	1 cut(s)	708
Asp700I	GAANNNNTTC	1 cut(s)	419
AspLEI	GCGC	2 cut(s)	391, 1216
AspS9I	GGNCC	3 cut(s)	502, 1122, 1352
AsuC2I	CCSGG	2 cut(s)	353, 741
AsuHPI	GGTGA	2 cut(s)	340, 995
AvaII	GGWCC	1 cut(s)	1352
BaeGI	GKGCMC	1 cut(s)	353
BalI	TGGCCA	2 cut(s)	8, 1109
BanI	GGYRCC	3 cut(s)	152, 289, 521
BauI	CACGAG	1 cut(s)	849
BbsI	GAAGAC	2 cut(s)	933, 1140
Bbv12I	GWGCWC	3 cut(s)	470, 585, 677
BbvI	GCAGC	9 cut(s)	31, 113, 116, 119, 122, 125, 350, 609, 737
BccI	CCATC	5 cut(s)	513, 803, 901, 1162, 1306
BceAI	ACGGC	3 cut(s)	277, 467, 709
BcgI	CGANNNNNNTGC	2 cut(s)	920, 954
BciT130I	CCWGG	1 cut(s)	239
BclI	TGATCA	2 cut(s)	64, 985
BcnI	CCSGG	2 cut(s)	353, 741
BcoDI	GTCTC	3 cut(s)	186, 246, 1358
BcuI	ACTAGT	1 cut(s)	29
BfaI	CTAG	3 cut(s)	30, 1140, 1332
BfmI	CTRYAG	1 cut(s)	263
BglII	AGATCT	1 cut(s)	228
BlpI	GCTNAGC	1 cut(s)	1236
Bme1390I	CCNGG	3 cut(s)	239, 353, 741
Bme18I	GGWCC	1 cut(s)	1352
BmeRI	GACNNNNNGTC	1 cut(s)	611
BmgT120I	GGNCC	3 cut(s)	502, 1122, 1352
BmiI	GGNNCC	7 cut(s)	154, 245, 291, 357, 523, 1353, 1354
BmrFI	CCNGG	3 cut(s)	239, 353, 741
BmsI	GCATC	2 cut(s)	157, 258
BoxI	GACNNNNGTC	1 cut(s)	546
BpiI	GAAGAC	2 cut(s)	933, 1140
BplI	GAGNNNNNCTC	2 cut(s)	1355, 1387
BpmI	CTGGAG	3 cut(s)	224, 670, 1199
Bpu1102I	GCTNAGC	1 cut(s)	1236
BpuMI	CCSGG	2 cut(s)	353, 741
BsaAI	YACGTR	1 cut(s)	220
BsaBI	GATNNNNATC	2 cut(s)	69, 813
BsaI	GGTCTC	1 cut(s)	246
BsaJI	CCNNGG	5 cut(s)	238, 293, 1092, 1110, 1375
BsaWI	WCCGGW	1 cut(s)	163
Bsc4I	CCNNNNNNNGG	2 cut(s)	163, 740
Bse118I	RCCGGY	3 cut(s)	145, 149, 640
Bse1I	ACTGG	2 cut(s)	207, 749
Bse3DI	GCAATG	2 cut(s)	455, 734
Bse8I	GATNNNNATC	2 cut(s)	69, 813
BseAI	TCCGGA	1 cut(s)	163
BseBI	CCWGG	1 cut(s)	239
BseDI	CCNNGG	5 cut(s)	238, 293, 1092, 1110, 1375
BseGI	GGATG	1 cut(s)	172
BseJI	GATNNNNATC	2 cut(s)	69, 813
BseLI	CCNNNNNNNGG	2 cut(s)	163, 740
BseMI	GCAATG	2 cut(s)	455, 734
BseMII	CTCAG	1 cut(s)	1250
BseNI	ACTGG	2 cut(s)	207, 749
BseRI	GAGGAG	3 cut(s)	28, 720, 1109
BseSI	GKGCMC	1 cut(s)	353
BseX3I	CGGCCG	1 cut(s)	147
BseXI	GCAGC	9 cut(s)	31, 113, 116, 119, 122, 125, 350, 609, 737
Bsh1236I	CGCG	1 cut(s)	978
Bsh1285I	CGRYCG	2 cut(s)	146, 150
BshFI	GGCC	9 cut(s)	8, 149, 503, 619, 650, 696, 1109, 1124, 1172
BshNI	GGYRCC	3 cut(s)	152, 289, 521
BsiEI	CGRYCG	2 cut(s)	146, 150
BsiHKAI	GWGCWC	3 cut(s)	470, 585, 677
BsiSI	CCGG	8 cut(s)	146, 150, 164, 353, 424, 616, 641, 741
BslFI	GGGAC	1 cut(s)	1365
BslI	CCNNNNNNNGG	2 cut(s)	163, 740
BsmAI	GTCTC	3 cut(s)	186, 246, 1358
BsmBI	CGTCTC	1 cut(s)	1358
BsmFI	GGGAC	1 cut(s)	1365
BsnI	GGCC	9 cut(s)	8, 149, 503, 619, 650, 696, 1109, 1124, 1172
Bso31I	GGTCTC	1 cut(s)	246
Bsp1286I	GDGCHC	4 cut(s)	353, 470, 585, 677
Bsp13I	TCCGGA	1 cut(s)	163
Bsp143I	GATC	7 cut(s)	64, 160, 228, 322, 397, 985, 1200
Bsp1720I	GCTNAGC	1 cut(s)	1236
Bsp19I	CCATGG	1 cut(s)	1110
BspANI	GGCC	9 cut(s)	8, 149, 503, 619, 650, 696, 1109, 1124, 1172
BspCNI	CTCAG	1 cut(s)	1249
BspEI	TCCGGA	1 cut(s)	163
BspFNI	CGCG	1 cut(s)	978
BspHI	TCATGA	1 cut(s)	796
BspLI	GGNNCC	7 cut(s)	154, 245, 291, 357, 523, 1353, 1354
BspMAI	CTGCAG	1 cut(s)	267
BspPI	GGATC	3 cut(s)	155, 330, 1208
BspT107I	GGYRCC	3 cut(s)	152, 289, 521
BspTNI	GGTCTC	1 cut(s)	246
BsrDI	GCAATG	2 cut(s)	455, 734
BsrFI	RCCGGY	3 cut(s)	145, 149, 640
BsrI	ACTGG	2 cut(s)	207, 749
BssAI	RCCGGY	3 cut(s)	145, 149, 640
BssECI	CCNNGG	5 cut(s)	238, 293, 1092, 1110, 1375
BssMI	GATC	7 cut(s)	64, 160, 228, 322, 397, 985, 1200
BssSI	CACGAG	1 cut(s)	849
BssT1I	CCWWGG	1 cut(s)	1110
Bst2BI	CACGAG	1 cut(s)	849
Bst2UI	CCWGG	1 cut(s)	239
Bst4CI	ACNGT	2 cut(s)	215, 545
Bst6I	CTCTTC	1 cut(s)	329
BstAPI	GCANNNNNTGC	1 cut(s)	289
BstBAI	YACGTR	1 cut(s)	220
BstC8I	GCNNGC	7 cut(s)	151, 602, 630, 642, 652, 1218, 1307
BstDEI	CTNAG	2 cut(s)	88, 1236
BstDSI	CCRYGG	2 cut(s)	293, 1110
BstF5I	GGATG	1 cut(s)	172
BstFNI	CGCG	1 cut(s)	978
BstHHI	GCGC	2 cut(s)	391, 1216
BstKTI	GATC	7 cut(s)	67, 163, 231, 325, 400, 988, 1203
BstMAI	GTCTC	3 cut(s)	186, 246, 1358
BstMBI	GATC	7 cut(s)	64, 160, 228, 322, 397, 985, 1200
BstMCI	CGRYCG	2 cut(s)	146, 150
BstNI	CCWGG	1 cut(s)	239
BstNSI	RCATGY	2 cut(s)	611, 1393
BstPAI	GACNNNNGTC	1 cut(s)	546
BstSCI	CCNGG	3 cut(s)	237, 351, 739
BstSFI	CTRYAG	1 cut(s)	263
BstSLI	GKGCMC	1 cut(s)	353
BstUI	CGCG	1 cut(s)	978
BstV1I	GCAGC	9 cut(s)	31, 113, 116, 119, 122, 125, 350, 609, 737
BstV2I	GAAGAC	2 cut(s)	933, 1140
BstX2I	RGATCY	2 cut(s)	160, 228
BstYI	RGATCY	2 cut(s)	160, 228
BstZI	CGGCCG	1 cut(s)	147
BsuRI	GGCC	9 cut(s)	8, 149, 503, 619, 650, 696, 1109, 1124, 1172
BtgI	CCRYGG	2 cut(s)	293, 1110
BtsCI	GGATG	1 cut(s)	172
Cac8I	GCNNGC	7 cut(s)	151, 602, 630, 642, 652, 1218, 1307
CaiI	CAGNNNCTG	1 cut(s)	262
CciI	TCATGA	1 cut(s)	796
CfoI	GCGC	2 cut(s)	391, 1216
Cfr10I	RCCGGY	3 cut(s)	145, 149, 640
Cfr13I	GGNCC	3 cut(s)	502, 1122, 1352
CseI	GACGC	2 cut(s)	657, 1145
Csp6I	GTAC	1 cut(s)	485
CspCI	CAANNNNNGTGG	4 cut(s)	362, 397, 499, 534
CviAII	CATG	9 cut(s)	74, 386, 608, 797, 806, 1111, 1319, 1381, 1390
CviQI	GTAC	1 cut(s)	485
DdeI	CTNAG	2 cut(s)	88, 1236
DpnI	GATC	7 cut(s)	66, 162, 230, 324, 399, 987, 1202
DpnII	GATC	7 cut(s)	64, 160, 228, 322, 397, 985, 1200
DraIII	CACNNNGTG	2 cut(s)	289, 980
DriI	GACNNNNNGTC	1 cut(s)	611
EaeI	YGGCCR	6 cut(s)	6, 147, 617, 694, 1107, 1170
EagI	CGGCCG	1 cut(s)	147
Eam1104I	CTCTTC	1 cut(s)	329
Eam1105I	GACNNNNNGTC	1 cut(s)	611
EarI	CTCTTC	1 cut(s)	329
EciI	GGCGGA	4 cut(s)	1130, 1235, 1264, 1387
EclXI	CGGCCG	1 cut(s)	147
Eco130I	CCWWGG	1 cut(s)	1110
Eco31I	GGTCTC	1 cut(s)	246
Eco47I	GGWCC	1 cut(s)	1352
Eco52I	CGGCCG	1 cut(s)	147
Eco57I	CTGAAG	2 cut(s)	326, 620
EcoO109I	RGGNCCY	2 cut(s)	1122, 1352
EcoRII	CCWGG	1 cut(s)	237
EcoT14I	CCWWGG	1 cut(s)	1110
ErhI	CCWWGG	1 cut(s)	1110
Esp3I	CGTCTC	1 cut(s)	1358
FaeI	CATG	9 cut(s)	77, 389, 611, 800, 809, 1114, 1322, 1384, 1393
FalI	AAGNNNNNCTT	4 cut(s)	404, 436, 1298, 1330
FaqI	GGGAC	1 cut(s)	1365
FatI	CATG	9 cut(s)	73, 385, 607, 796, 805, 1110, 1318, 1380, 1389
FauI	CCCGC	1 cut(s)	303
FauNDI	CATATG	1 cut(s)	870
FbaI	TGATCA	2 cut(s)	64, 985
FokI	GGATG	1 cut(s)	179
FspBI	CTAG	3 cut(s)	30, 1140, 1332
GlaI	GCGC	2 cut(s)	390, 1215
GsuI	CTGGAG	3 cut(s)	224, 670, 1199
HaeIII	GGCC	9 cut(s)	8, 149, 503, 619, 650, 696, 1109, 1124, 1172
HapII	CCGG	8 cut(s)	146, 150, 164, 353, 424, 616, 641, 741
HgaI	GACGC	2 cut(s)	657, 1145
HhaI	GCGC	2 cut(s)	391, 1216
Hin1II	CATG	9 cut(s)	77, 389, 611, 800, 809, 1114, 1322, 1384, 1393
Hin6I	GCGC	2 cut(s)	389, 1214
HinP1I	GCGC	2 cut(s)	389, 1214
HindIII	AAGCTT	1 cut(s)	953
HinfI	GANTC	4 cut(s)	206, 259, 408, 998
HpaII	CCGG	8 cut(s)	146, 150, 164, 353, 424, 616, 641, 741
HphI	GGTGA	2 cut(s)	340, 995
Hpy188I	TCNGA	7 cut(s)	64, 211, 407, 493, 901, 1093, 1360
Hpy188III	TCNNGA	7 cut(s)	164, 247, 412, 561, 660, 797, 1061
Hpy99I	CGWCG	5 cut(s)	407, 673, 695, 901, 1364
HpyAV	CCTTC	7 cut(s)	60, 88, 273, 828, 899, 1403, 1409
HpyCH4III	ACNGT	2 cut(s)	215, 545
HpyCH4IV	ACGT	2 cut(s)	197, 219
HpyCH4V	TGCA	8 cut(s)	265, 271, 597, 628, 725, 941, 1285, 1305
HpyF3I	CTNAG	2 cut(s)	88, 1236
HpySE526I	ACGT	2 cut(s)	197, 219
Hsp92II	CATG	9 cut(s)	77, 389, 611, 800, 809, 1114, 1322, 1384, 1393
HspAI	GCGC	2 cut(s)	389, 1214
KflI	GGGWCCC	1 cut(s)	1352
Kpn2I	TCCGGA	1 cut(s)	163
KroI	GCCGGC	2 cut(s)	149, 640
KroNI	GCCGGC	2 cut(s)	151, 642
Ksp22I	TGATCA	2 cut(s)	64, 985
Kzo9I	GATC	7 cut(s)	64, 160, 228, 322, 397, 985, 1200
LmnI	GCTCC	8 cut(s)	52, 98, 355, 473, 733, 1052, 1222, 1277
Lsp1109I	GCAGC	9 cut(s)	31, 113, 116, 119, 122, 125, 350, 609, 737
LweI	GCATC	2 cut(s)	157, 258
MaeI	CTAG	3 cut(s)	30, 1140, 1332
MaeII	ACGT	2 cut(s)	197, 219
MaeIII	GTNAC	6 cut(s)	198, 215, 233, 476, 1334, 1385
MalI	GATC	7 cut(s)	66, 162, 230, 324, 399, 987, 1202
MboI	GATC	7 cut(s)	64, 160, 228, 322, 397, 985, 1200
MboII	GAAGA	7 cut(s)	45, 48, 288, 343, 346, 938, 1145
MflI	RGATCY	2 cut(s)	160, 228
MhlI	GDGCHC	4 cut(s)	353, 470, 585, 677
MlsI	TGGCCA	2 cut(s)	8, 1109
MluCI	AATT	2 cut(s)	623, 1266
MluNI	TGGCCA	2 cut(s)	8, 1109
MlyI	GAGTC	1 cut(s)	215
MmeI	TCCRAC	4 cut(s)	385, 879, 1324, 1383
Mox20I	TGGCCA	2 cut(s)	8, 1109
MroI	TCCGGA	1 cut(s)	163
MroNI	GCCGGC	2 cut(s)	149, 640
MroXI	GAANNNNTTC	1 cut(s)	419
MscI	TGGCCA	2 cut(s)	8, 1109
MseI	TTAA	2 cut(s)	708, 882
MslI	CAYNNNNRTG	2 cut(s)	72, 1317
Msp20I	TGGCCA	2 cut(s)	8, 1109
MspI	CCGG	8 cut(s)	146, 150, 164, 353, 424, 616, 641, 741
MspR9I	CCNGG	3 cut(s)	239, 353, 741
MvaI	CCWGG	1 cut(s)	239
MvnI	CGCG	1 cut(s)	978
NaeI	GCCGGC	2 cut(s)	151, 642
NciI	CCSGG	2 cut(s)	353, 741
NcoI	CCATGG	1 cut(s)	1110
NdeI	CATATG	1 cut(s)	870
NdeII	GATC	7 cut(s)	64, 160, 228, 322, 397, 985, 1200
NgoMIV	GCCGGC	2 cut(s)	149, 640
NlaIII	CATG	9 cut(s)	77, 389, 611, 800, 809, 1114, 1322, 1384, 1393
NlaIV	GGNNCC	7 cut(s)	154, 245, 291, 357, 523, 1353, 1354
NmeAIII	GCCGAG	4 cut(s)	372, 384, 1198, 1356
NspI	RCATGY	2 cut(s)	611, 1393
PagI	TCATGA	1 cut(s)	796
PciI	ACATGT	2 cut(s)	607, 1389
PcsI	WCGNNNNNNNCGW	1 cut(s)	399
PdiI	GCCGGC	2 cut(s)	151, 642
PdmI	GAANNNNTTC	1 cut(s)	419
PfeI	GAWTC	3 cut(s)	259, 408, 998
PleI	GAGTC	1 cut(s)	214
PpsI	GAGTC	1 cut(s)	214
Ppu21I	YACGTR	1 cut(s)	220
PpuMI	RGGWCCY	1 cut(s)	1352
PscI	ACATGT	2 cut(s)	607, 1389
PshAI	GACNNNNGTC	1 cut(s)	546
PshBI	ATTAAT	1 cut(s)	708
PsiI	TTATAA	1 cut(s)	788
Psp1406I	AACGTT	1 cut(s)	197
Psp5II	RGGWCCY	1 cut(s)	1352
Psp6I	CCWGG	1 cut(s)	237
PspGI	CCWGG	1 cut(s)	237
PspN4I	GGNNCC	7 cut(s)	154, 245, 291, 357, 523, 1353, 1354
PspPI	GGNCC	3 cut(s)	502, 1122, 1352
PspPPI	RGGWCCY	1 cut(s)	1352
PstI	CTGCAG	1 cut(s)	267
PstNI	CAGNNNCTG	1 cut(s)	262
PsuI	RGATCY	2 cut(s)	160, 228
RsaI	GTAC	1 cut(s)	486
RsaNI	GTAC	1 cut(s)	485
RseI	CAYNNNNRTG	2 cut(s)	72, 1317
SaqAI	TTAA	2 cut(s)	708, 882
Sau3AI	GATC	7 cut(s)	64, 160, 228, 322, 397, 985, 1200
Sau96I	GGNCC	3 cut(s)	502, 1122, 1352
SchI	GAGTC	1 cut(s)	215
ScrFI	CCNGG	3 cut(s)	239, 353, 741
SduI	GDGCHC	4 cut(s)	353, 470, 585, 677
SfaNI	GCATC	2 cut(s)	157, 258
SfcI	CTRYAG	1 cut(s)	263
SinI	GGWCC	1 cut(s)	1352
SmiMI	CAYNNNNRTG	2 cut(s)	72, 1317
SpeI	ACTAGT	1 cut(s)	29
Sse9I	AATT	2 cut(s)	623, 1266
SspMI	CTAG	3 cut(s)	30, 1140, 1332
StyD4I	CCNGG	3 cut(s)	237, 351, 739
StyI	CCWWGG	1 cut(s)	1110
TaaI	ACNGT	2 cut(s)	215, 545
TaiI	ACGT	2 cut(s)	200, 222
TaqI	TCGA	2 cut(s)	671, 919
TasI	AATT	2 cut(s)	623, 1266
TauI	GCSGC	4 cut(s)	647, 650, 969, 1159
TfiI	GAWTC	3 cut(s)	259, 408, 998
Tru1I	TTAA	2 cut(s)	708, 882
Tru9I	TTAA	2 cut(s)	708, 882
TseI	GCWGC	9 cut(s)	44, 101, 104, 107, 110, 113, 363, 597, 725
TspDTI	ATGAA	2 cut(s)	565, 1040
VpaK11BI	GGWCC	1 cut(s)	1352
VspI	ATTAAT	1 cut(s)	708
XceI	RCATGY	2 cut(s)	611, 1393
XmnI	GAANNNNTTC	1 cut(s)	419
XspI	CTAG	3 cut(s)	30, 1140, 1332

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.