Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004077

Physical Location & Seq

Genomic Coordinates Forward (+)

9275893 .. 9278625

Gene Structure 2733 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G26667.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 627 bp

ATGGGATCTGTTGATGCTGCTAATGGAAGTGGGAAGAAACCTACAGTTATATTTGTTCTTGGTGGTCCAGGAAGTGGAAAAGGTACCCAGTGTGCTTATATTGTTGAACATTATGGTTACACACATCTGAGTGCTGGAGATCTTCTTAGAGCTGAGATTAAATCAGGTTCTGAAAATGGAACTATGATCCAGAATATGATTAAAGAGGGGAAGATTGTACCTTCTGAGGTTACTATCAAGCTTCTACAGAAAGCTATTCAGGAAAACGGGAATGACAAGTTCCTCATTGATGGTTTCCCTCGTAATGAGGAAAACCGAGCAGCATTTGAAAAAGTTACTGAGATTGAACCAAAGTTTGTCTTATTCTTCGATTGTCCTGAGGAAGAGATGGAGAAGCGCCTGTTGGGCCGAAACCAGGGGAGAGAGGATGACAATATTGAGACTATAAGGAAGCGCTTTAAGGTGTTTCTTGAATCTAGCTTACCAGTGATTCATTACTACGAAGCTAAGGGGAAAGTTAGGAAGATTAATGCTGCAAAGCCCATTGAAGCTGTCTTCGAGGAGGTGAAGGCAATTTTTTCTCCTGAAGCTGAGAAGGTAAAACTCAATAGTTGTGCTATTCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004127 GO:0005488 GO:0005524 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006220 GO:0006221 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009041 GO:0009058 GO:0009117 GO:0009123 GO:0009129 GO:0009161 GO:0009165 GO:0009173 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016776 GO:0017076 GO:0018130 GO:0019205 GO:0019438 GO:0019637 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0034654 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046940 GO:0048046 GO:0050145 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:0097159 GO:0097367 GO:1901265 GO:1901293 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00240 ko00983 ko01100 map00240 map00983 map01100

Pfam Domains

Protein Families

ADK

Protein Analysis

208

Amino Acids

23.12

Weight (kDa)

6.36

Isoelectric Point (pI)

40.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_33	PF13671	16 - 152	7.7e-07	AAA domain
AAA_18	PF13238	17 - 144	2e-10	AAA domain
ADK	PF00406	19 - 171	2.2e-49	Adenylate kinase
AAA_17	PF13207	20 - 150	1.1e-38	AAA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004077)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G60180 AT3G60180 AT5G26667 AT5G26667 AT5G26667 AT5G26667
fragaria_vesca	FvH4_6g07810 FvH4_6g07810 FvH4_6g07810
malus_domestica	MD04G1062600.v1.1 MD07G1087100.v1.1
prunus_persica	Prupe.2G114000_v2.0.a1 Prupe.2G114000_v2.0.a1 Prupe.2G114000_v2.0.a1 Prupe.2G114000_v2.0.a1
pyrus_communis	pycom04g05600
rosa_chinensis	RchiOBHm_Chr1g0343601 RchiOBHm_Chr3g0457521
rosa_laevigata	RLG00000028960
rosa_multiflora	Rmu_sc0000335.1_g000002 Rmu_sc0001290.1_g000001 Rmu_sc0007404.1_g000013 Rmu_sc0007404.1_g000014
rosa_roxburghii	Rroxscaffold_4G00310450 Rroxscaffold_6G00421800
rosa_rugosa	Rorug01G0167700 Rorug03G0020700
rosa_samantha	Rh1AG183900 Rh3BG083600 Rh3CG083800 Rh3DG085200
rosa_wichuraiana	Rw1G015230 Rw3G006990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	83
AccB1I	GGYRCC	1 cut(s)	83
AccB7I	CCANNNNNTGG	1 cut(s)	74
AclWI	GGATC	2 cut(s)	13, 181
AcuI	CTGAAG	1 cut(s)	606
AfaI	GTAC	2 cut(s)	85, 219
AfeI	AGCGCT	1 cut(s)	455
AfiI	CCNNNNNNNGG	2 cut(s)	74, 415
AgsI	TTSAA	5 cut(s)	107, 329, 347, 473, 548
AjnI	CCWGG	2 cut(s)	67, 414
AjuI	GAANNNNNNNTTGG	2 cut(s)	386, 418
AluBI	AGCT	7 cut(s)	152, 241, 254, 480, 506, 551, 590
AluI	AGCT	7 cut(s)	152, 241, 254, 480, 506, 551, 590
Alw26I	GTCTC	1 cut(s)	434
AlwI	GGATC	2 cut(s)	13, 181
AlwNI	CAGNNNCTG	1 cut(s)	170
Aor51HI	AGCGCT	1 cut(s)	455
AoxI	GGCC	1 cut(s)	406
ApeKI	GCWGC	3 cut(s)	17, 320, 533
AseI	ATTAAT	1 cut(s)	528
Asp718I	GGTACC	1 cut(s)	83
AspLEI	GCGC	2 cut(s)	399, 456
AspS9I	GGNCC	2 cut(s)	65, 406
AsuHPI	GGTGA	1 cut(s)	577
AvaII	GGWCC	1 cut(s)	65
AxyI	CCTNAGG	1 cut(s)	378
BanI	GGYRCC	1 cut(s)	83
BbsI	GAAGAC	1 cut(s)	547
BbvI	GCAGC	3 cut(s)	4, 332, 520
BccI	CCATC	2 cut(s)	284, 382
BciT130I	CCWGG	2 cut(s)	69, 416
BcoDI	GTCTC	1 cut(s)	434
BfaI	CTAG	1 cut(s)	477
BfmI	CTRYAG	2 cut(s)	42, 245
BfoI	RGCGCY	2 cut(s)	400, 457
BglI	GCCNNNNNGGC	1 cut(s)	405
BglII	AGATCT	1 cut(s)	139
BisI	GCNGC	3 cut(s)	18, 321, 534
BlsI	GCNGC	3 cut(s)	19, 322, 535
Bme1390I	CCNGG	2 cut(s)	69, 416
Bme18I	GGWCC	1 cut(s)	65
BmgT120I	GGNCC	2 cut(s)	65, 406
BmiI	GGNNCC	1 cut(s)	85
BmrFI	CCNGG	2 cut(s)	69, 416
BmrI	ACTGGG	1 cut(s)	82
BmsI	GCATC	1 cut(s)	4
BmuI	ACTGGG	1 cut(s)	82
BpiI	GAAGAC	1 cut(s)	547
BpmI	CTGGAG	1 cut(s)	156
Bpu10I	CCTNAGC	1 cut(s)	507
BsaJI	CCNNGG	1 cut(s)	415
Bsc4I	CCNNNNNNNGG	2 cut(s)	74, 415
Bse1I	ACTGG	2 cut(s)	88, 485
Bse21I	CCTNAGG	1 cut(s)	378
BseBI	CCWGG	2 cut(s)	69, 416
BseDI	CCNNGG	1 cut(s)	415
BseGI	GGATG	1 cut(s)	433
BseLI	CCNNNNNNNGG	2 cut(s)	74, 415
BseMII	CTCAG	6 cut(s)	119, 144, 216, 330, 369, 582
BseNI	ACTGG	2 cut(s)	88, 485
BseRI	GAGGAG	1 cut(s)	575
BseXI	GCAGC	3 cut(s)	4, 332, 520
BshFI	GGCC	1 cut(s)	408
BshNI	GGYRCC	1 cut(s)	83
BslI	CCNNNNNNNGG	2 cut(s)	74, 415
BsmAI	GTCTC	1 cut(s)	434
BsnI	GGCC	1 cut(s)	408
Bsp143I	GATC	3 cut(s)	5, 139, 186
BspANI	GGCC	1 cut(s)	408
BspCNI	CTCAG	6 cut(s)	120, 145, 217, 331, 370, 583
BspLI	GGNNCC	1 cut(s)	85
BspPI	GGATC	2 cut(s)	13, 181
BspT107I	GGYRCC	1 cut(s)	83
BsrI	ACTGG	2 cut(s)	88, 485
BssECI	CCNNGG	1 cut(s)	415
BssMI	GATC	3 cut(s)	5, 139, 186
Bst2UI	CCWGG	2 cut(s)	69, 416
Bst4CI	ACNGT	1 cut(s)	46
Bst6I	CTCTTC	1 cut(s)	378
BstDEI	CTNAG	8 cut(s)	128, 146, 153, 225, 339, 378, 507, 591
BstF5I	GGATG	1 cut(s)	433
BstH2I	RGCGCY	2 cut(s)	400, 457
BstHHI	GCGC	2 cut(s)	399, 456
BstKTI	GATC	3 cut(s)	8, 142, 189
BstMAI	GTCTC	1 cut(s)	434
BstMBI	GATC	3 cut(s)	5, 139, 186
BstMWI	GCNNNNNNNGC	1 cut(s)	405
BstNI	CCWGG	2 cut(s)	69, 416
BstSCI	CCNGG	2 cut(s)	67, 414
BstSFI	CTRYAG	2 cut(s)	42, 245
BstV1I	GCAGC	3 cut(s)	4, 332, 520
BstV2I	GAAGAC	1 cut(s)	547
BstX2I	RGATCY	2 cut(s)	5, 139
BstYI	RGATCY	2 cut(s)	5, 139
Bsu36I	CCTNAGG	1 cut(s)	378
BsuRI	GGCC	1 cut(s)	408
BtsCI	GGATG	1 cut(s)	433
BtsIMutI	CAGTG	2 cut(s)	95, 492
CaiI	CAGNNNCTG	1 cut(s)	170
CfoI	GCGC	2 cut(s)	399, 456
Cfr13I	GGNCC	2 cut(s)	65, 406
Csp6I	GTAC	2 cut(s)	84, 218
CviJI	RGCY	9 cut(s)	152, 241, 254, 408, 480, 506, 541, 551, 590
CviKI_1	RGCY	9 cut(s)	152, 241, 254, 408, 480, 506, 541, 551, 590
CviQI	GTAC	2 cut(s)	84, 218
DdeI	CTNAG	8 cut(s)	128, 146, 153, 225, 339, 378, 507, 591
DpnI	GATC	3 cut(s)	7, 141, 188
DpnII	GATC	3 cut(s)	5, 139, 186
Eam1104I	CTCTTC	1 cut(s)	378
EarI	CTCTTC	1 cut(s)	378
Eco47I	GGWCC	1 cut(s)	65
Eco47III	AGCGCT	1 cut(s)	455
Eco57I	CTGAAG	1 cut(s)	606
Eco81I	CCTNAGG	1 cut(s)	378
EcoRII	CCWGG	2 cut(s)	67, 414
FaiI	YATR	6 cut(s)	50, 99, 114, 185, 197, 446
FalI	AAGNNNNNCTT	2 cut(s)	344, 376
Fnu4HI	GCNGC	3 cut(s)	18, 321, 534
FokI	GGATG	1 cut(s)	440
Fsp4HI	GCNGC	3 cut(s)	18, 321, 534
FspBI	CTAG	1 cut(s)	477
GlaI	GCGC	2 cut(s)	398, 455
GluI	GCNGC	3 cut(s)	18, 321, 534
GsuI	CTGGAG	1 cut(s)	156
HaeII	RGCGCY	2 cut(s)	400, 457
HaeIII	GGCC	1 cut(s)	408
HhaI	GCGC	2 cut(s)	399, 456
Hin6I	GCGC	2 cut(s)	397, 454
HinP1I	GCGC	2 cut(s)	397, 454
HindIII	AAGCTT	1 cut(s)	239
HinfI	GANTC	2 cut(s)	473, 490
HphI	GGTGA	1 cut(s)	577
Hpy188I	TCNGA	3 cut(s)	129, 172, 226
Hpy188III	TCNNGA	5 cut(s)	190, 260, 377, 470, 584
HpyAV	CCTTC	3 cut(s)	231, 562, 589
HpyCH4III	ACNGT	1 cut(s)	46
HpyCH4V	TGCA	1 cut(s)	536
HpyF10VI	GCNNNNNNNGC	1 cut(s)	405
HpyF3I	CTNAG	8 cut(s)	128, 146, 153, 225, 339, 378, 507, 591
HspAI	GCGC	2 cut(s)	397, 454
KpnI	GGTACC	1 cut(s)	87
Kzo9I	GATC	3 cut(s)	5, 139, 186
Lsp1109I	GCAGC	3 cut(s)	4, 332, 520
LweI	GCATC	1 cut(s)	4
MaeI	CTAG	1 cut(s)	477
MaeIII	GTNAC	3 cut(s)	116, 229, 334
MalI	GATC	3 cut(s)	7, 141, 188
MboI	GATC	3 cut(s)	5, 139, 186
MboII	GAAGA	7 cut(s)	46, 134, 223, 358, 395, 535, 547
MflI	RGATCY	2 cut(s)	5, 139
MluCI	AATT	1 cut(s)	573
MnlI	CCTC	9 cut(s)	199, 220, 293, 301, 309, 373, 418, 553, 556
MseI	TTAA	4 cut(s)	159, 201, 459, 528
MslI	CAYNNNNRTG	1 cut(s)	129
MspR9I	CCNGG	2 cut(s)	69, 416
MvaI	CCWGG	2 cut(s)	69, 416
MwoI	GCNNNNNNNGC	1 cut(s)	405
NdeII	GATC	3 cut(s)	5, 139, 186
NlaIV	GGNNCC	1 cut(s)	85
PfeI	GAWTC	2 cut(s)	473, 490
PflMI	CCANNNNNTGG	1 cut(s)	74
PfoI	TCCNGGA	1 cut(s)	67
PkrI	GCNGC	3 cut(s)	19, 322, 535
PshBI	ATTAAT	1 cut(s)	528
Psp6I	CCWGG	2 cut(s)	67, 414
PspGI	CCWGG	2 cut(s)	67, 414
PspN4I	GGNNCC	1 cut(s)	85
PspPI	GGNCC	2 cut(s)	65, 406
PstNI	CAGNNNCTG	1 cut(s)	170
PsuI	RGATCY	2 cut(s)	5, 139
RsaI	GTAC	2 cut(s)	85, 219
RsaNI	GTAC	2 cut(s)	84, 218
RseI	CAYNNNNRTG	1 cut(s)	129
SaqAI	TTAA	4 cut(s)	159, 201, 459, 528
SatI	GCNGC	3 cut(s)	18, 321, 534
Sau3AI	GATC	3 cut(s)	5, 139, 186
Sau96I	GGNCC	2 cut(s)	65, 406
ScrFI	CCNGG	2 cut(s)	69, 416
SfaNI	GCATC	1 cut(s)	4
SfcI	CTRYAG	2 cut(s)	42, 245
SinI	GGWCC	1 cut(s)	65
SmiMI	CAYNNNNRTG	1 cut(s)	129
Sse9I	AATT	1 cut(s)	573
SspI	AATATT	1 cut(s)	436
SspMI	CTAG	1 cut(s)	477
StyD4I	CCNGG	2 cut(s)	67, 414
TaaI	ACNGT	1 cut(s)	46
TaqI	TCGA	2 cut(s)	369, 558
TasI	AATT	1 cut(s)	573
TfiI	GAWTC	2 cut(s)	473, 490
Tru1I	TTAA	4 cut(s)	159, 201, 459, 528
Tru9I	TTAA	4 cut(s)	159, 201, 459, 528
TscAI	CASTG	2 cut(s)	95, 492
TseI	GCWGC	3 cut(s)	17, 320, 533
TspDTI	ATGAA	1 cut(s)	482
TspRI	CASTG	2 cut(s)	95, 492
Van91I	CCANNNNNTGG	1 cut(s)	74
VpaK11BI	GGWCC	1 cut(s)	65
VspI	ATTAAT	1 cut(s)	528
XspI	CTAG	1 cut(s)	477

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.