Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005642

Physical Location & Seq

Genomic Coordinates Reverse (-)

9793745 .. 9799149

Gene Structure 5405 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G27680.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2577 bp

ATGGATTTGTCTTCTGATCAACTCGTGATGAAGATTGTTGAAATGGGTTTTGAAAAGTTGGATGCTTTGGAGGCTGTAAAAGCTGTAGGTGGTAAGTCATGTGATGATGCTGTTGAGTATATTTTGAAGGGAAATCATAGAACTGGTGGGTTCAAGCCGGCTAGTTTGCTATGTTCTTCAGGGAGTAATAAGATTCTTGGTAAAAGAGCTATGCCATCTTCGTTTTCTTCTTCGGAGTCAAAGCGTCAGTCTAGTTTGCTTGACCATTTTAGATCTGTGAACCAGAACAAGAAAAAAGGCGACACCTTTGGGACTGTAGAAGTGGACTCTCAGTTAGAAACGGTGTCTGAGCATTCAGAAGAGGTGAGAAAGTCTTTAGCTCCAGTGTTTATGGAGTCTAGTTGTTTTCCTGAAGGACAATTGTTGAATGGTTGCTCAGAGGCTTCATCATCGTGGGAGAAAAGAGTTAATTCTATACTACGAAACCGGTTTGGTATTTCATCCCTGAGAAGTTTCCAAAGAGAGGCTTTGTCAACATGGGTTGCGCACAAGGACTGTCTTGTTCTAGCTGCAACGGGATCTGGGAAATCTCTTTGCTTCCAGATTCCTGCATTATTAACGGGAAAAGTTGTTGTCGTAATTTCGCCTTTGATAAGCTTGATGCATGATCAATGCCTCAAGCTATCAAGGCACAAAGTCTCTGCTTGTTTTCTTGGTTCAGGCCAACTTGATAATTGCATAGAAGAGAAGGCAATGCAGGGAATGTATCAGATCATATATGTTTGCCCTGAGACAGTGGTCCGACTGATTAAACCACTCCAGAAGCTTGCAAAGACTCATGGAATTGCTCTTTTTGCAATTGATGAAGCGCATTGCGTATCAAAGTGGGGACATGATTTCCGTCCGCACTACAGGAAATTATCGGTGTTGCGGGAAAATTTCTGTGCCAGCAATTTGGAATTCTTAGAATATGATGTACCGATAATGGCATTGACTGCAACAGCCACTGTTAACGTTCAGGAAGATATTCTTGAGTCACTTCACCTGTCAAAGGAAACAAAAATTGTACTTACTTCATTTTTCAGGCCAAATCTACAATTTTCTGTTAAACATAGTCGAACCAAGTTTGCATCTTCATATGCAAAGGACTTCCAAAACTTAGTTGACTTATACTCTGAAAAGAAAAACTCTACCGGGAAAAAGCTAGCAGTAATCTCACGAGAGTCAGAGGAGCAGACTGATTTTGGTTCTCACGATTCTGAAAACATCCATGAGACGGATTATGATGAGGATGAAGAGGATCAAGAAAACTCCCTGGCAAAGAAAAACAGTTCAAATGGGAAAGAATTGTCAGAAGCGTATCTGGAAGATGAAACTGACATTTTCCAGAGTGTTGATGATTGGGATGTGGCTTGTGGCGAGTTTTGCGCAATGCCTTCTTGTGAACTCCTGGAAATACCTGTCCCTTCTGAAAAGCAAAAGGATTTAGAAGGACTGACAATCATATACGTTCCTACAAGAAAGGAGAGTGTCAACATTGCTAAGTATCTTTGTGGGGTTGGACTGAAAGCTGCAGCTTATAATGCATCGTTGCCAAAAAAACATCTCAGACAAGTGCACCAGGACTTTCACGATAATAAGCTGCAGGTTGTTGTTGCCACAATTGCGTTTGGAATGGGAATTGACAAGAAAAATGTTCGGAAAATCATACATTATGGTTGGCTGCAGAGCTTGGAAGCATACTACCAAGAAGCTGGTCGAGCTGGAAGAGATGGCGAATTGGCTGAGTGTGTGCTCTATGCTGATCTATCGAGAGCACCAACGCTTTTGCCAAGCCGTAGGAGCAAAGAACAGACAGAGCAAGCATACAAGATGCTATCTGACTGTTTCAGATATGGAATGAACACTTCACAATGTCGGGCCAAAATACTTGTGGAGTACTTTGGGGAGGAATTTAGTTCCAAAAAGTGTAACTCATGTGATGTTTGCACTGAAGGGCCTCCGGAGCTAGTAGATGTACGAGAGGAAGCTAATCTTTTGTTTCAAGTAATCACTGCTTTTCATTTGCAGGTAGACAATGACTCTGAGCATGCACCATATGAAGATTATGGACTCGGCAACAGCAAACAAAATAAATTATCCCACAAGCCAAATCTTCTGTTCTTCATCAGTAAACTCAGGGAACAGTGTGAAAAATTCAAGGAAACAGATTGTCTTTGGTGGAAAGGTCTTGCCCGTATCATGGAAGCCGAAGGATACATCAAAGAGATGGATAACAAGGATCGTCGAGTTGAGATTAAATTCATACAACCAACAGAAAAAGGGAAGAAACAACTAGATTTCCAAGATGACAAACCACTCTATGTTTATCCAGAAGCCGACATGCTACTTTCGTTGAAACAAGATAGAACATACAGTGGATTCTCTGAATGGGGAAAAGGATGGGCAGATCCAGAGATCCGGCGCCAGCGGTTAGAGAGAAGAGAAAGAAAGCCTCGAAGAGAAAGGAAACCCCGAAAAAAACGAACACGAGGACGTTCTTCGACGAAGTTACATCCATGGAGAAGCAAAGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009378 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032392 GO:0032508 GO:0033554 GO:0034641 GO:0042623 GO:0043138 GO:0043140 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070035 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C RecQ_Zn_bind

Protein Analysis

858

Amino Acids

97.46

Weight (kDa)

7.06

Isoelectric Point (pI)

49.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	171 - 340	4.7e-24	DEAD/DEAH box helicase
RecQ_Zn_bind	PF16124	573 - 637	1.5e-12	RecQ zinc-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005642)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G27680 AT5G27680 AT5G27680 AT5G27680 AT5G27680 AT5G27680
fragaria_vesca	FvH4_6g06440 FvH4_6g06440 FvH4_6g06440 FvH4_6g06440
malus_domestica	MD04G1201600.v1.1
prunus_persica	Prupe.6G321800_v2.0.a1 Prupe.6G321800_v2.0.a1 Prupe.6G321800_v2.0.a1 Prupe.6G321800_v2.0.a1
pyrus_communis	pycom04g17780
rosa_chinensis	RchiOBHm_Chr3g0455521
rosa_laevigata	RLG00000025352
rosa_multiflora	Rmu_sc0005164.1_g000005 Rmu_sc0010428.1_g000001
rosa_roxburghii	Rroxscaffold_6G00423700 Rroxscaffold_6G00424190
rosa_rugosa	Rorug03G0008300
rosa_samantha	Rh3AG067700 Rh3BG070300 Rh3CG068600 Rh3DG070200
rosa_wichuraiana	Rw3G005380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1581
Acc16I	TGCGCA	2 cut(s)	546, 1429
Acc36I	ACCTGC	2 cut(s)	1636, 2059
AccB1I	GGYRCC	1 cut(s)	2463
AccI	GTMKAC	1 cut(s)	2073
AccIII	TCCGGA	1 cut(s)	2002
AciI	CCGC	3 cut(s)	905, 931, 2470
AclI	AACGTT	1 cut(s)	1014
AclWI	GGATC	5 cut(s)	586, 1308, 2289, 2444, 2452
AcsI	RAATTY	5 cut(s)	937, 959, 1952, 2195, 2300
AcuI	CTGAAG	3 cut(s)	162, 432, 2013
AcyI	GRCGYC	1 cut(s)	2464
AfaI	GTAC	4 cut(s)	978, 1068, 1940, 2019
AfiI	CCNNNNNNNGG	4 cut(s)	523, 1051, 1276, 2242
AgeI	ACCGGT	1 cut(s)	486
AgsI	TTSAA	9 cut(s)	41, 53, 127, 154, 427, 1335, 2045, 2200, 2398
AjnI	CCWGG	3 cut(s)	1314, 1449, 1620
Alw21I	GWGCWC	3 cut(s)	1620, 1797, 1819
Alw26I	GTCTC	3 cut(s)	703, 785, 1268
Alw44I	GTGCAC	1 cut(s)	1616
AlwI	GGATC	5 cut(s)	586, 1308, 2289, 2444, 2452
AlwNI	CAGNNNCTG	1 cut(s)	1007
Aor13HI	TCCGGA	1 cut(s)	2002
AoxI	GGCC	4 cut(s)	721, 1085, 1920, 1997
ApaLI	GTGCAC	1 cut(s)	1616
ApeKI	GCWGC	5 cut(s)	569, 1571, 1574, 1642, 1723
ApoI	RAATTY	5 cut(s)	937, 959, 1952, 2195, 2300
ArsI	GACNNNNNNTTYG	2 cut(s)	233, 265
AsiGI	ACCGGT	1 cut(s)	486
Asp700I	GAANNNNTTC	1 cut(s)	1026
AspLEI	GCGC	4 cut(s)	547, 871, 1430, 2466
AspS9I	GGNCC	3 cut(s)	799, 1920, 1997
AsuC2I	CCSGG	1 cut(s)	1195
AsuHPI	GGTGA	2 cut(s)	376, 1034
AsuNHI	GCTAGC	1 cut(s)	1204
AvaII	GGWCC	1 cut(s)	799
BaeGI	GKGCMC	1 cut(s)	1620
BanI	GGYRCC	1 cut(s)	2463
BauI	CACGAG	3 cut(s)	23, 1218, 2529
BbsI	GAAGAC	1 cut(s)	3
Bbv12I	GWGCWC	3 cut(s)	1620, 1797, 1819
BbvI	GCAGC	5 cut(s)	556, 1558, 1586, 1629, 1710
BccI	CCATC	4 cut(s)	223, 1766, 2263, 2436
BceAI	ACGGC	1 cut(s)	1821
BciT130I	CCWGG	3 cut(s)	1316, 1451, 1622
BciVI	GTATCC	1 cut(s)	2249
BclI	TGATCA	2 cut(s)	16, 667
BcnI	CCSGG	1 cut(s)	1195
BcoDI	GTCTC	3 cut(s)	703, 785, 1268
BfaI	CTAG	7 cut(s)	162, 252, 399, 566, 1205, 2009, 2336
BfmI	CTRYAG	6 cut(s)	84, 315, 910, 1572, 1643, 1724
BfoI	RGCGCY	1 cut(s)	2467
BfuAI	ACCTGC	2 cut(s)	1636, 2059
BfuI	GTATCC	1 cut(s)	2249
BglII	AGATCT	1 cut(s)	272
BisI	GCNGC	5 cut(s)	570, 1572, 1575, 1643, 1724
BlsI	GCNGC	5 cut(s)	571, 1573, 1576, 1644, 1725
BmcAI	AGTACT	1 cut(s)	1940
Bme1390I	CCNGG	4 cut(s)	1195, 1316, 1451, 1622
Bme18I	GGWCC	1 cut(s)	799
BmgT120I	GGNCC	3 cut(s)	799, 1920, 1997
BmiI	GGNNCC	1 cut(s)	2465
BmrFI	CCNGG	4 cut(s)	1195, 1316, 1451, 1622
BmsI	GCATC	6 cut(s)	52, 97, 651, 1139, 1595, 1863
BmtI	GCTAGC	1 cut(s)	1208
BoxI	GACNNNNGTC	1 cut(s)	797
BpiI	GAAGAC	1 cut(s)	3
BpmI	CTGGAG	2 cut(s)	366, 803
BpuEI	CTTGAG	2 cut(s)	662, 1052
BpuMI	CCSGG	1 cut(s)	1195
BsaHI	GRCGYC	1 cut(s)	2464
BsaJI	CCNNGG	2 cut(s)	1314, 2558
BsaWI	WCCGGW	2 cut(s)	486, 2002
Bsc4I	CCNNNNNNNGG	4 cut(s)	523, 1051, 1276, 2242
Bse118I	RCCGGY	2 cut(s)	157, 486
Bse1I	ACTGG	2 cut(s)	148, 383
Bse3DI	GCAATG	4 cut(s)	759, 871, 1437, 1536
BseAI	TCCGGA	1 cut(s)	2002
BseBI	CCWGG	3 cut(s)	1316, 1451, 1622
BseDI	CCNNGG	2 cut(s)	1314, 2558
BseGI	GGATG	7 cut(s)	67, 500, 1266, 1297, 1411, 2447, 2554
BseLI	CCNNNNNNNGG	4 cut(s)	523, 1051, 1276, 2242
BseMI	GCAATG	4 cut(s)	759, 871, 1437, 1536
BseMII	CTCAG	9 cut(s)	339, 344, 450, 497, 780, 1621, 1776, 2076, 2191
BseNI	ACTGG	2 cut(s)	148, 383
BseRI	GAGGAG	1 cut(s)	1244
BseSI	GKGCMC	1 cut(s)	1620
BseXI	GCAGC	5 cut(s)	556, 1558, 1586, 1629, 1710
BshFI	GGCC	4 cut(s)	723, 1087, 1922, 1999
BshNI	GGYRCC	1 cut(s)	2463
BshTI	ACCGGT	1 cut(s)	486
BsiHKAI	GWGCWC	3 cut(s)	1620, 1797, 1819
BsiSI	CCGG	5 cut(s)	158, 487, 1194, 2003, 2461
BslFI	GGGAC	3 cut(s)	325, 903, 1448
BslI	CCNNNNNNNGG	4 cut(s)	523, 1051, 1276, 2242
BsmAI	GTCTC	3 cut(s)	703, 785, 1268
BsmBI	CGTCTC	1 cut(s)	1268
BsmFI	GGGAC	3 cut(s)	325, 903, 1448
BsmI	GAATGC	1 cut(s)	352
BsnI	GGCC	4 cut(s)	723, 1087, 1922, 1999
Bsp1286I	GDGCHC	3 cut(s)	1620, 1797, 1819
Bsp13I	TCCGGA	1 cut(s)	2002
Bsp19I	CCATGG	1 cut(s)	2558
BspACI	CCGC	3 cut(s)	905, 931, 2470
BspANI	GGCC	4 cut(s)	723, 1087, 1922, 1999
BspCNI	CTCAG	9 cut(s)	340, 343, 449, 498, 781, 1620, 1777, 2077, 2190
BspEI	TCCGGA	1 cut(s)	2002
BspLI	GGNNCC	1 cut(s)	2465
BspMAI	CTGCAG	3 cut(s)	1576, 1647, 1728
BspMI	ACCTGC	2 cut(s)	1636, 2059
BspOI	GCTAGC	1 cut(s)	1208
BspPI	GGATC	5 cut(s)	586, 1308, 2289, 2444, 2452
BspT107I	GGYRCC	1 cut(s)	2463
BsrDI	GCAATG	4 cut(s)	759, 871, 1437, 1536
BsrFI	RCCGGY	2 cut(s)	157, 486
BsrI	ACTGG	2 cut(s)	148, 383
BssAI	RCCGGY	2 cut(s)	157, 486
BssECI	CCNNGG	2 cut(s)	1314, 2558
BssNI	GRCGYC	1 cut(s)	2464
BssSI	CACGAG	3 cut(s)	23, 1218, 2529
BssT1I	CCWWGG	1 cut(s)	2558
Bst2BI	CACGAG	3 cut(s)	23, 1218, 2529
Bst2UI	CCWGG	3 cut(s)	1316, 1451, 1622
Bst4CI	ACNGT	9 cut(s)	316, 343, 557, 796, 1009, 1331, 1886, 2187, 2417
Bst6I	CTCTTC	6 cut(s)	354, 738, 1290, 1762, 2476, 2494
BstACI	GRCGYC	1 cut(s)	2464
BstAPI	GCANNNNNTGC	1 cut(s)	995
BstC8I	GCNNGC	7 cut(s)	159, 828, 949, 1206, 1863, 2091, 2468
BstDSI	CCRYGG	1 cut(s)	2558
BstENI	CCTNNNNNAGG	1 cut(s)	1049
BstF5I	GGATG	7 cut(s)	67, 500, 1266, 1297, 1411, 2447, 2554
BstH2I	RGCGCY	1 cut(s)	2467
BstHHI	GCGC	4 cut(s)	547, 871, 1430, 2466
BstMAI	GTCTC	3 cut(s)	703, 785, 1268
BstNI	CCWGG	3 cut(s)	1316, 1451, 1622
BstNSI	RCATGY	2 cut(s)	2093, 2386
BstPAI	GACNNNNGTC	1 cut(s)	797
BstSCI	CCNGG	4 cut(s)	1193, 1314, 1449, 1620
BstSFI	CTRYAG	6 cut(s)	84, 315, 910, 1572, 1643, 1724
BstSLI	GKGCMC	1 cut(s)	1620
BstV1I	GCAGC	5 cut(s)	556, 1558, 1586, 1629, 1710
BstV2I	GAAGAC	1 cut(s)	3
BstX2I	RGATCY	4 cut(s)	272, 578, 2449, 2457
BstXI	CCANNNNNNTGG	2 cut(s)	955, 1754
BstYI	RGATCY	4 cut(s)	272, 578, 2449, 2457
BsuI	GTATCC	1 cut(s)	2249
BsuRI	GGCC	4 cut(s)	723, 1087, 1922, 1999
BtgI	CCRYGG	1 cut(s)	2558
BtsCI	GGATG	7 cut(s)	67, 500, 1266, 1297, 1411, 2447, 2554
BtsI	GCAGTG	1 cut(s)	2052
BtsIMutI	CAGTG	7 cut(s)	390, 801, 1005, 1989, 2052, 2192, 2422
BveI	ACCTGC	2 cut(s)	1636, 2059
Cac8I	GCNNGC	7 cut(s)	159, 828, 949, 1206, 1863, 2091, 2468
CaiI	CAGNNNCTG	1 cut(s)	1007
CfoI	GCGC	4 cut(s)	547, 871, 1430, 2466
Cfr10I	RCCGGY	2 cut(s)	157, 486
Cfr13I	GGNCC	3 cut(s)	799, 1920, 1997
CseI	GACGC	1 cut(s)	233
Csp6I	GTAC	4 cut(s)	977, 1067, 1939, 2018
CspAI	ACCGGT	1 cut(s)	486
CviQI	GTAC	4 cut(s)	977, 1067, 1939, 2018
DinI	GGCGCC	1 cut(s)	2465
Eam1104I	CTCTTC	6 cut(s)	354, 738, 1290, 1762, 2476, 2494
EarI	CTCTTC	6 cut(s)	354, 738, 1290, 1762, 2476, 2494
Eco130I	CCWWGG	1 cut(s)	2558
Eco47I	GGWCC	1 cut(s)	799
Eco57I	CTGAAG	3 cut(s)	162, 432, 2013
EcoNI	CCTNNNNNAGG	1 cut(s)	1049
EcoO109I	RGGNCCY	1 cut(s)	1997
EcoRI	GAATTC	1 cut(s)	959
EcoRII	CCWGG	3 cut(s)	1314, 1449, 1620
EcoT14I	CCWWGG	1 cut(s)	2558
EcoT22I	ATGCAT	2 cut(s)	666, 1588
EgeI	GGCGCC	1 cut(s)	2465
EheI	GGCGCC	1 cut(s)	2465
ErhI	CCWWGG	1 cut(s)	2558
Esp3I	CGTCTC	1 cut(s)	1268
FalI	AAGNNNNNCTT	6 cut(s)	511, 543, 1014, 1046, 2019, 2051
FaqI	GGGAC	3 cut(s)	325, 903, 1448
FauI	CCCGC	1 cut(s)	924
FauNDI	CATATG	2 cut(s)	1138, 2098
FbaI	TGATCA	2 cut(s)	16, 667
FblI	GTMKAC	1 cut(s)	2073
Fnu4HI	GCNGC	5 cut(s)	570, 1572, 1575, 1643, 1724
FokI	GGATG	7 cut(s)	74, 487, 1253, 1304, 1418, 2454, 2541
Fsp4HI	GCNGC	5 cut(s)	570, 1572, 1575, 1643, 1724
FspBI	CTAG	7 cut(s)	162, 252, 399, 566, 1205, 2009, 2336
FspI	TGCGCA	2 cut(s)	546, 1429
GlaI	GCGC	4 cut(s)	546, 870, 1429, 2465
GluI	GCNGC	5 cut(s)	570, 1572, 1575, 1643, 1724
GsuI	CTGGAG	2 cut(s)	366, 803
HaeII	RGCGCY	1 cut(s)	2467
HaeIII	GGCC	4 cut(s)	723, 1087, 1922, 1999
HapII	CCGG	5 cut(s)	158, 487, 1194, 2003, 2461
HgaI	GACGC	1 cut(s)	233
HhaI	GCGC	4 cut(s)	547, 871, 1430, 2466
Hin1I	GRCGYC	1 cut(s)	2464
Hin6I	GCGC	4 cut(s)	545, 869, 1428, 2464
HinP1I	GCGC	4 cut(s)	545, 869, 1428, 2464
HincII	GTYRAC	4 cut(s)	534, 1012, 1165, 1534
HindII	GTYRAC	4 cut(s)	534, 1012, 1165, 1534
HindIII	AAGCTT	2 cut(s)	655, 824
HpaI	GTTAAC	1 cut(s)	1012
HpaII	CCGG	5 cut(s)	158, 487, 1194, 2003, 2461
HphI	GGTGA	2 cut(s)	376, 1034
Hpy99I	CGWCG	2 cut(s)	2289, 2548
HpyAV	CCTTC	8 cut(s)	121, 407, 742, 1446, 1476, 1484, 1988, 2246
HpyCH4III	ACNGT	9 cut(s)	316, 343, 557, 796, 1009, 1331, 1886, 2187, 2417
HpyCH4IV	ACGT	3 cut(s)	1014, 1509, 2536
HpySE526I	ACGT	3 cut(s)	1014, 1509, 2536
Hsp92I	GRCGYC	1 cut(s)	2464
HspAI	GCGC	4 cut(s)	545, 869, 1428, 2464
KasI	GGCGCC	1 cut(s)	2463
Kpn2I	TCCGGA	1 cut(s)	2002
KroI	GCCGGC	1 cut(s)	157
KroNI	GCCGGC	1 cut(s)	159
Ksp22I	TGATCA	2 cut(s)	16, 667
KspAI	GTTAAC	1 cut(s)	1012
LmnI	GCTCC	4 cut(s)	385, 1231, 1842, 2005
Lsp1109I	GCAGC	5 cut(s)	556, 1558, 1586, 1629, 1710
LweI	GCATC	6 cut(s)	52, 97, 651, 1139, 1595, 1863
MaeI	CTAG	7 cut(s)	162, 252, 399, 566, 1205, 2009, 2336
MaeII	ACGT	3 cut(s)	1014, 1509, 2536
MaeIII	GTNAC	3 cut(s)	1035, 1970, 2550
MfeI	CAATTG	3 cut(s)	419, 858, 1662
MflI	RGATCY	4 cut(s)	272, 578, 2449, 2457
MhlI	GDGCHC	3 cut(s)	1620, 1797, 1819
Mly113I	GGCGCC	1 cut(s)	2464
MlyI	GAGTC	8 cut(s)	245, 320, 404, 829, 1043, 1232, 2075, 2106
MmeI	TCCRAC	3 cut(s)	39, 826, 1540
Mph1103I	ATGCAT	2 cut(s)	666, 1588
MroI	TCCGGA	1 cut(s)	2002
MroNI	GCCGGC	1 cut(s)	157
MroXI	GAANNNNTTC	1 cut(s)	1026
MseI	TTAA	6 cut(s)	468, 617, 810, 1011, 1107, 2298
MslI	CAYNNNNRTG	1 cut(s)	451
MspA1I	CMGCKG	1 cut(s)	2470
MspI	CCGG	5 cut(s)	158, 487, 1194, 2003, 2461
MspR9I	CCNGG	4 cut(s)	1195, 1316, 1451, 1622
MunI	CAATTG	3 cut(s)	419, 858, 1662
Mva1269I	GAATGC	1 cut(s)	352
MvaI	CCWGG	3 cut(s)	1316, 1451, 1622
NaeI	GCCGGC	1 cut(s)	159
NarI	GGCGCC	1 cut(s)	2464
NciI	CCSGG	1 cut(s)	1195
NcoI	CCATGG	1 cut(s)	2558
NdeI	CATATG	2 cut(s)	1138, 2098
NgoMIV	GCCGGC	1 cut(s)	157
NheI	GCTAGC	1 cut(s)	1204
NlaIV	GGNNCC	1 cut(s)	2465
NmeAIII	GCCGAG	1 cut(s)	2094
NmuCI	GTSAC	1 cut(s)	1035
NsbI	TGCGCA	2 cut(s)	546, 1429
NsiI	ATGCAT	2 cut(s)	666, 1588
NspI	RCATGY	2 cut(s)	2093, 2386
PaeI	GCATGC	1 cut(s)	2093
PctI	GAATGC	1 cut(s)	352
PdiI	GCCGGC	1 cut(s)	159
PdmI	GAANNNNTTC	1 cut(s)	1026
PfeI	GAWTC	4 cut(s)	193, 604, 1256, 2421
PfoI	TCCNGGA	1 cut(s)	1449
PinAI	ACCGGT	1 cut(s)	486
PkrI	GCNGC	5 cut(s)	571, 1573, 1576, 1644, 1725
PleI	GAGTC	8 cut(s)	244, 320, 403, 829, 1042, 1231, 2075, 2106
PluTI	GGCGCC	1 cut(s)	2467
PpsI	GAGTC	8 cut(s)	244, 320, 403, 829, 1042, 1231, 2075, 2106
PshAI	GACNNNNGTC	1 cut(s)	797
PsiI	TTATAA	1 cut(s)	1581
Psp1406I	AACGTT	1 cut(s)	1014
Psp6I	CCWGG	3 cut(s)	1314, 1449, 1620
PspGI	CCWGG	3 cut(s)	1314, 1449, 1620
PspN4I	GGNNCC	1 cut(s)	2465
PspPI	GGNCC	3 cut(s)	799, 1920, 1997
PstI	CTGCAG	3 cut(s)	1576, 1647, 1728
PstNI	CAGNNNCTG	1 cut(s)	1007
PsuI	RGATCY	4 cut(s)	272, 578, 2449, 2457
RsaI	GTAC	4 cut(s)	978, 1068, 1940, 2019
RsaNI	GTAC	4 cut(s)	977, 1067, 1939, 2018
RseI	CAYNNNNRTG	1 cut(s)	451
SaqAI	TTAA	6 cut(s)	468, 617, 810, 1011, 1107, 2298
SatI	GCNGC	5 cut(s)	570, 1572, 1575, 1643, 1724
Sau96I	GGNCC	3 cut(s)	799, 1920, 1997
ScaI	AGTACT	1 cut(s)	1940
SchI	GAGTC	8 cut(s)	245, 320, 404, 829, 1043, 1232, 2075, 2106
ScrFI	CCNGG	4 cut(s)	1195, 1316, 1451, 1622
SduI	GDGCHC	3 cut(s)	1620, 1797, 1819
SfaNI	GCATC	6 cut(s)	52, 97, 651, 1139, 1595, 1863
SfcI	CTRYAG	6 cut(s)	84, 315, 910, 1572, 1643, 1724
SfoI	GGCGCC	1 cut(s)	2465
SinI	GGWCC	1 cut(s)	799
SmiMI	CAYNNNNRTG	1 cut(s)	451
SmlI	CTYRAG	2 cut(s)	677, 1031
SmoI	CTYRAG	2 cut(s)	677, 1031
SphI	GCATGC	1 cut(s)	2093
SsiI	CCGC	3 cut(s)	905, 931, 2470
SspDI	GGCGCC	1 cut(s)	2463
SspMI	CTAG	7 cut(s)	162, 252, 399, 566, 1205, 2009, 2336
StyD4I	CCNGG	4 cut(s)	1193, 1314, 1449, 1620
StyI	CCWWGG	1 cut(s)	2558
TaaI	ACNGT	9 cut(s)	316, 343, 557, 796, 1009, 1331, 1886, 2187, 2417
TaiI	ACGT	3 cut(s)	1017, 1512, 2539
TaqI	TCGA	6 cut(s)	1117, 1759, 1811, 2287, 2497, 2543
TatI	WGTACW	2 cut(s)	1066, 1938
TfiI	GAWTC	4 cut(s)	193, 604, 1256, 2421
Tru1I	TTAA	6 cut(s)	468, 617, 810, 1011, 1107, 2298
Tru9I	TTAA	6 cut(s)	468, 617, 810, 1011, 1107, 2298
TscAI	CASTG	7 cut(s)	390, 801, 1012, 1996, 2059, 2192, 2422
TseFI	GTSAC	1 cut(s)	1035
TseI	GCWGC	5 cut(s)	569, 1571, 1574, 1642, 1723
Tsp45I	GTSAC	1 cut(s)	1035
TspGWI	ACGGA	2 cut(s)	890, 1292
TspRI	CASTG	7 cut(s)	390, 801, 1012, 1996, 2059, 2192, 2422
VneI	GTGCAC	1 cut(s)	1616
VpaK11BI	GGWCC	1 cut(s)	799
XagI	CCTNNNNNAGG	1 cut(s)	1049
XapI	RAATTY	5 cut(s)	937, 959, 1952, 2195, 2300
XceI	RCATGY	2 cut(s)	2093, 2386
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1930
XmiI	GTMKAC	1 cut(s)	2073
XmnI	GAANNNNTTC	1 cut(s)	1026
XspI	CTAG	7 cut(s)	162, 252, 399, 566, 1205, 2009, 2336
ZrmI	AGTACT	1 cut(s)	1940
Zsp2I	ATGCAT	2 cut(s)	666, 1588

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.