Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0005642

Physical Location & Seq

Genomic Coordinates Reverse (-)

3749319 .. 3755550

Gene Structure 6232 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g06440.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2682 bp

ATGCATAATATGAATGGCAATGGCGTATCAGGCGATGAAGTCATTGCAAAGCTGCTTGAAATGGGATTCGAGAATTCCAGTGTAGTAGAAGCTGTGAAAGAAGTTGGGCCGTCTTTTGATGTTGCATTGGAGTTTATACTGAATGGTTGTTGTAGAAGCAATCAGAGAGCATCTAGTAGTTCCACTAGCAAGGCAAAGGCTCCTGGGAAAAGAGCTTTGCCCTCCTCGAAACCGTTGGGACAGATTCGGCAGTCTAGCATACTGGATCATTTCCAATCCTCAAGTGCACCTAAGCGGAGGAAGACTGATGTGGTACCTGATGTACCAGTTTTCGGGTCAGAAAGTGTACATGGTTCTGTAGACCAATGTGTGGAGGTTTTATCAGAATTGCCTTCGGTTGGTTGCCTGGACATTGGTTCAGATTGGGAGAAGAAAGCTGAGAGTCTCTTGCAAAAGCATTTTGGTTTTTTTTCATTAAAACCTTTCCAGAAGGAGGTGTTAGCTGCTTGGTTGGCTCACAAAGATACACTTGTTCTTGCGGCAACAGGATCTGGTAAATCTCTGTGTTTCCAGATTCCAGCATTGTTGACTGGGAAGGTAGTTGTTGTGATTTCACCATTAATAAGCTTGATGCACGATCAGTGCTTAAGGCTGGCAAAACATGGGGTTTCTGCTTGCTTCCTTGGATCTGGGCAACCTGACAGTACCGTGGAAAATAAAGCAATGAAAGGCGTGTACAACATAATATATGTTTGCCCCGAGACAATCTTAAGGCTGATAAAACCACTCCAGAATTTGGTAGAAATCCGTGGGATTGCTCTTTTTGCAATTGATGAAGTCCATTGTGTTTCGAAGTGGGGCCATGATTTTCGGCCTGACTACAGGAGATTGTCTGAGTTGCGAAAGAACTTCAGTGCTAGCAATTTAAAATTCTTAGACTTCGATATACCACTGATGGCATTGACTGCTACTGCAACAATTCAGGTTCGTGAAGACATTCTTAATTCATTGTCCATGTCAAAGGAAACAAAAGTTGTGCTTACTTCATTTTTCCGGCCAAATCTAAGATTCAGGGTACAGCATAGTAAAACATCAACATCATCATATGAGAATGATTTCCTTGACCTGATAGACATGTATATGGACAAGAGAGGAAAAGGTGAAAAGAAACAATTGATCACCTCAGAAGAAGTAAATGAAGTGCTGGACAGCTCATCTAACAGTAGTGTGTCAGAGGCTGATTGCAATTCAGAGAATGAGTTGGACAATATTGAGGATGGTAATTATGACAGGTTTGATGAAGCAAATGCACTCCAGGAAAATGGTTCAAGTGCTTCAAAGGGAAGGGAACTGTCAGTTGACTACTTGGAGAATGAAGTTGATGTCTTTCAGAGTGTGGATGATTGGGATGTTAGCTGTGGTGAATTCTGTGGACTACCTCTTTGTGAGGACATGAATACTAGAAAAGAAACTACATCTGATGTACTTGAATTACCAAATCAACCGGAAGAAAGACTGAGATTTCTGCAGCAGCCTCTAGAGAAAGGATCAACTATCATATATGTTCCTACAAGAAAACAAACGTTGAAAATTGCAACTTATCTTTGTAGGTGTGGATTGAAGGCTGCTGCCTATCATGCAGGGTTGCCAAAATCACGTTTAAGGCAGGTTCACAAGATGTTTCATGAAAATACAATAGAGGTTGTCGTGGCAACAATTGCTTTTGGAATGGGAATTGACAAGTTAAATGTCCGAAGAATCATTCATTATGGTTGGCCACAGAGTTTGGAAGCATATTATCAAGAAGCAGGTCGAGCAGGAAGGGATGGAAAGTTAGCTGACTGCATTTTATTTGCAAATCTAACAAGAGCACCATCACTTTTGCCGAGTCGAAGAAGCGAAGAGCAGACAAAGCAAGCATATAGAATGTTGTCTGATTGTTTCAGGTATGGAATGGCTTCCTCGTGCTGTCGGGCTAAAAAGCTTGTGGAGTACTTTGGGGAGGATTTCAGTCATGACAAGTGTCTCTTGTGTGATGTCTGTGTTACCGGACCTCCAGAAATGCAGAATTTCAGGAAGGAGGCAGATGTCTTATTGCAAGTTATTGCTGCTCATGATAGACAGGGCAGATACAAGAATAATGATATCATCAGTAATGATATTAGACGTGAGAGCTATACGGGGAGACTCAATCTCAGAATGATTGTCAGTAAAATAAGAGAGCAGTCTCAGCAGTTTATGGCAACTCAGCTGCTTTGGTGGCAAGGTCTTCTCCGGATTATGGAAGGTAAAGGGTTTGTCAGAGAGGAAGATGATAAGACACATGTTCAATTGAAGTTCCCCAAGCTAACAGAACTTGGCCTGGAGTTTCTACTATCCGAAAAGGAGAAAAGTTTCTATGTTCACCCTGAAGCAGATATGCTGCTCTCGGCAAGCATGCCCAAATCTTTCTCTACTTTCTCAGAGTGGGGAAAAGGCTGGGCTGATCCTGAGATTCGATGTCAGCGGTTGGAGAGTTTTCAACACAACAGAAGCCCACAAAGCTCCTTTGGTAAAAGAGGAAAACGAAAATCACGAAAGCAACGAACGAGAAAGTCAAGTGCTAGTAGTCAAAGTGTTAGAACTGTTAGAGGTAGAATAGAGGCTAAACTCTCCAAACAAAGTATCAGACCAAGGTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009378 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032392 GO:0032508 GO:0033554 GO:0034641 GO:0042623 GO:0043138 GO:0043140 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070035 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C RecQ_Zn_bind

Protein Analysis

894

Amino Acids

100.53

Weight (kDa)

8.5

Isoelectric Point (pI)

48.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	161 - 328	5.6e-25	DEAD/DEAH box helicase
Helicase_C	PF00271	483 - 580	1.2e-16	Helicase conserved C-terminal domain
RecQ_Zn_bind	PF16124	601 - 651	8.7e-08	RecQ zinc-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005642)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G27680 AT5G27680 AT5G27680 AT5G27680 AT5G27680 AT5G27680
fragaria_vesca	FvH4_6g06440 FvH4_6g06440 FvH4_6g06440 FvH4_6g06440
malus_domestica	MD04G1201600.v1.1
prunus_persica	Prupe.6G321800_v2.0.a1 Prupe.6G321800_v2.0.a1 Prupe.6G321800_v2.0.a1 Prupe.6G321800_v2.0.a1
pyrus_communis	pycom04g17780
rosa_chinensis	RchiOBHm_Chr3g0455521
rosa_laevigata	RLG00000025352
rosa_multiflora	Rmu_sc0005164.1_g000005 Rmu_sc0010428.1_g000001
rosa_roxburghii	Rroxscaffold_6G00423700 Rroxscaffold_6G00424190
rosa_rugosa	Rorug03G0008300
rosa_samantha	Rh3AG067700 Rh3BG070300 Rh3CG068600 Rh3DG070200
rosa_wichuraiana	Rw3G005380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1657, 1799
Acc65I	GGTACC	1 cut(s)	313
AccB1I	GGYRCC	1 cut(s)	313
AccB7I	CCANNNNNTGG	2 cut(s)	370, 796
AccI	GTMKAC	1 cut(s)	360
AccIII	TCCGGA	1 cut(s)	2274
AciI	CCGC	3 cut(s)	295, 539, 2506
AclI	AACGTT	1 cut(s)	1583
AclWI	GGATC	5 cut(s)	273, 556, 694, 1555, 2480
AcoI	YGGCCR	2 cut(s)	1055, 1775
AcsI	RAATTY	5 cut(s)	73, 793, 929, 1424, 2068
AcuI	CTGAAG	2 cut(s)	895, 2430
AfaI	GTAC	8 cut(s)	315, 324, 348, 706, 737, 1077, 1485, 1994
AfiI	CCNNNNNNNGG	6 cut(s)	332, 370, 398, 493, 796, 2281
AflII	CTTAAG	2 cut(s)	646, 769
AflIII	ACRYGT	2 cut(s)	1134, 2323
AgsI	TTSAA	9 cut(s)	59, 1329, 1338, 1490, 1588, 1621, 2330, 2335, 2522
AjiI	CACGTC	1 cut(s)	2168
AjnI	CCWGG	4 cut(s)	202, 405, 1314, 2361
Alw21I	GWGCWC	2 cut(s)	289, 1873
Alw26I	GTCTC	5 cut(s)	449, 755, 2030, 2179, 2232
Alw44I	GTGCAC	1 cut(s)	285
AlwI	GGATC	5 cut(s)	273, 556, 694, 1555, 2480
AlwNI	CAGNNNCTG	2 cut(s)	551, 1238
Ama87I	CYCGRG	1 cut(s)	758
Aor13HI	TCCGGA	1 cut(s)	2274
AoxI	GGCC	6 cut(s)	107, 859, 872, 1055, 1775, 2359
ApaLI	GTGCAC	1 cut(s)	285
ApeKI	GCWGC	9 cut(s)	52, 503, 1528, 1531, 1625, 1628, 2108, 2251, 2422
ApoI	RAATTY	5 cut(s)	73, 793, 929, 1424, 2068
ArsI	GACNNNNNNTTYG	2 cut(s)	1425, 1457
AseI	ATTAAT	1 cut(s)	620
Asp700I	GAANNNNTTC	4 cut(s)	996, 1115, 1957, 2393
Asp718I	GGTACC	1 cut(s)	313
AspS9I	GGNCC	3 cut(s)	107, 859, 2051
AsuHPI	GGTGA	5 cut(s)	606, 1171, 1172, 1433, 2396
AsuII	TTCGAA	1 cut(s)	851
AsuNHI	GCTAGC	1 cut(s)	917
AvaI	CYCGRG	1 cut(s)	758
AvaII	GGWCC	1 cut(s)	2051
BaeGI	GKGCMC	1 cut(s)	289
BaeI	ACNNNNGTAYC	2 cut(s)	516, 549
BalI	TGGCCA	1 cut(s)	1777
BanI	GGYRCC	1 cut(s)	313
BauI	CACGAG	1 cut(s)	1963
BbsI	GAAGAC	3 cut(s)	308, 999, 2261
Bbv12I	GWGCWC	2 cut(s)	289, 1873
BbvI	GCAGC	9 cut(s)	39, 490, 1540, 1543, 1612, 1615, 2095, 2238, 2409
BccI	CCATC	4 cut(s)	949, 1271, 1820, 1882
BceAI	ACGGC	1 cut(s)	94
BciT130I	CCWGG	4 cut(s)	204, 407, 1316, 2363
BclI	TGATCA	1 cut(s)	1176
BcoDI	GTCTC	5 cut(s)	449, 755, 2030, 2179, 2232
BfaI	CTAG	7 cut(s)	174, 186, 255, 918, 1461, 1538, 2604
BfmI	CTRYAG	3 cut(s)	357, 880, 1526
BfrI	CTTAAG	2 cut(s)	646, 769
BfuAI	ACCTGC	2 cut(s)	1657, 1799
BmcAI	AGTACT	1 cut(s)	1994
Bme1390I	CCNGG	4 cut(s)	204, 407, 1316, 2363
Bme18I	GGWCC	1 cut(s)	2051
BmeT110I	CYCGRG	1 cut(s)	758
BmgBI	CACGTC	1 cut(s)	2168
BmgT120I	GGNCC	3 cut(s)	107, 859, 2051
BmiI	GGNNCC	3 cut(s)	201, 315, 860
BmrFI	CCNGG	4 cut(s)	204, 407, 1316, 2363
BmrI	ACTGGG	1 cut(s)	600
BmsI	GCATC	2 cut(s)	179, 621
BmtI	GCTAGC	1 cut(s)	921
BmuI	ACTGGG	1 cut(s)	600
BoxI	GACNNNNGTC	2 cut(s)	2022, 2674
BpiI	GAAGAC	3 cut(s)	308, 999, 2261
BpmI	CTGGAG	4 cut(s)	773, 1298, 2040, 2384
Bpu10I	CCTNAGC	1 cut(s)	291
Bpu14I	TTCGAA	1 cut(s)	851
BpuEI	CTTGAG	1 cut(s)	265
BsaJI	CCNNGG	5 cut(s)	203, 682, 708, 808, 2672
BsaWI	WCCGGW	3 cut(s)	1504, 2048, 2274
BsaXI	ACNNNNNCTCC	2 cut(s)	2038, 2068
Bsc4I	CCNNNNNNNGG	6 cut(s)	332, 370, 398, 493, 796, 2281
Bse1I	ACTGG	4 cut(s)	78, 267, 326, 595
Bse3DI	GCAATG	3 cut(s)	25, 42, 729
BseAI	TCCGGA	1 cut(s)	2274
BseBI	CCWGG	4 cut(s)	204, 407, 1316, 2363
BseDI	CCNNGG	5 cut(s)	203, 682, 708, 808, 2672
BseGI	GGATG	4 cut(s)	1282, 1405, 1414, 1831
BseLI	CCNNNNNNNGG	6 cut(s)	332, 370, 398, 493, 796, 2281
BseMI	GCAATG	3 cut(s)	25, 42, 729
BseMII	CTCAG	9 cut(s)	429, 885, 1197, 1508, 2209, 2243, 2261, 2475, 2481
BseNI	ACTGG	4 cut(s)	78, 267, 326, 595
BseRI	GAGGAG	1 cut(s)	214
BseSI	GKGCMC	1 cut(s)	289
BseXI	GCAGC	9 cut(s)	39, 490, 1540, 1543, 1612, 1615, 2095, 2238, 2409
BseYI	CCCAGC	1 cut(s)	2478
BshFI	GGCC	6 cut(s)	109, 861, 874, 1057, 1777, 2361
BshNI	GGYRCC	1 cut(s)	313
BsiHKAI	GWGCWC	2 cut(s)	289, 1873
BsiHKCI	CYCGRG	1 cut(s)	758
BsiSI	CCGG	4 cut(s)	1054, 1505, 2049, 2275
BslFI	GGGAC	1 cut(s)	252
BslI	CCNNNNNNNGG	6 cut(s)	332, 370, 398, 493, 796, 2281
BsmAI	GTCTC	5 cut(s)	449, 755, 2030, 2179, 2232
BsmFI	GGGAC	1 cut(s)	252
BsnI	GGCC	6 cut(s)	109, 861, 874, 1057, 1777, 2361
BsoBI	CYCGRG	1 cut(s)	758
Bsp119I	TTCGAA	1 cut(s)	851
Bsp1286I	GDGCHC	2 cut(s)	289, 1873
Bsp13I	TCCGGA	1 cut(s)	2274
Bsp1407I	TGTACA	2 cut(s)	346, 735
Bsp143I	GATC	7 cut(s)	265, 548, 637, 686, 1176, 1547, 2485
BspACI	CCGC	3 cut(s)	295, 539, 2506
BspANI	GGCC	6 cut(s)	109, 861, 874, 1057, 1777, 2361
BspCNI	CTCAG	9 cut(s)	430, 886, 1196, 1509, 2208, 2242, 2260, 2474, 2482
BspEI	TCCGGA	1 cut(s)	2274
BspHI	TCATGA	3 cut(s)	1684, 2014, 2113
BspLI	GGNNCC	3 cut(s)	201, 315, 860
BspMAI	CTGCAG	1 cut(s)	1530
BspMI	ACCTGC	2 cut(s)	1657, 1799
BspOI	GCTAGC	1 cut(s)	921
BspPI	GGATC	5 cut(s)	273, 556, 694, 1555, 2480
BspQI	GCTCTTC	1 cut(s)	1896
BspT104I	TTCGAA	1 cut(s)	851
BspT107I	GGYRCC	1 cut(s)	313
BspTI	CTTAAG	2 cut(s)	646, 769
BsrDI	GCAATG	3 cut(s)	25, 42, 729
BsrGI	TGTACA	2 cut(s)	346, 735
BsrI	ACTGG	4 cut(s)	78, 267, 326, 595
BssECI	CCNNGG	5 cut(s)	203, 682, 708, 808, 2672
BssMI	GATC	7 cut(s)	265, 548, 637, 686, 1176, 1547, 2485
BssSI	CACGAG	1 cut(s)	1963
BssT1I	CCWWGG	2 cut(s)	682, 2672
Bst2BI	CACGAG	1 cut(s)	1963
Bst2UI	CCWGG	4 cut(s)	204, 407, 1316, 2363
Bst4CI	ACNGT	6 cut(s)	234, 704, 709, 1223, 1353, 2626
Bst6I	CTCTTC	1 cut(s)	1896
BstAFI	CTTAAG	2 cut(s)	646, 769
BstAPI	GCANNNNNTGC	2 cut(s)	965, 1718
BstAUI	TGTACA	2 cut(s)	346, 735
BstBI	TTCGAA	1 cut(s)	851
BstC8I	GCNNGC	6 cut(s)	654, 676, 919, 1917, 2434, 2438
BstDSI	CCRYGG	2 cut(s)	708, 808
BstF5I	GGATG	4 cut(s)	1282, 1405, 1414, 1831
BstKTI	GATC	7 cut(s)	268, 551, 640, 689, 1179, 1550, 2488
BstMAI	GTCTC	5 cut(s)	449, 755, 2030, 2179, 2232
BstMBI	GATC	7 cut(s)	265, 548, 637, 686, 1176, 1547, 2485
BstNI	CCWGG	4 cut(s)	204, 407, 1316, 2363
BstNSI	RCATGY	3 cut(s)	1138, 2327, 2440
BstPAI	GACNNNNGTC	2 cut(s)	2022, 2674
BstSCI	CCNGG	4 cut(s)	202, 405, 1314, 2361
BstSFI	CTRYAG	3 cut(s)	357, 880, 1526
BstSLI	GKGCMC	1 cut(s)	289
BstV1I	GCAGC	9 cut(s)	39, 490, 1540, 1543, 1612, 1615, 2095, 2238, 2409
BstV2I	GAAGAC	3 cut(s)	308, 999, 2261
BstX2I	RGATCY	2 cut(s)	548, 686
BstXI	CCANNNNNNTGG	1 cut(s)	1322
BstYI	RGATCY	2 cut(s)	548, 686
BsuRI	GGCC	6 cut(s)	109, 861, 874, 1057, 1777, 2361
BtgI	CCRYGG	2 cut(s)	708, 808
BtgZI	GCGATG	1 cut(s)	48
BtrI	CACGTC	1 cut(s)	2168
BtsCI	GGATG	4 cut(s)	1282, 1405, 1414, 1831
BtsIMutI	CAGTG	4 cut(s)	85, 647, 919, 950
BveI	ACCTGC	2 cut(s)	1657, 1799
Cac8I	GCNNGC	6 cut(s)	654, 676, 919, 1917, 2434, 2438
CaiI	CAGNNNCTG	2 cut(s)	551, 1238
CciI	TCATGA	3 cut(s)	1684, 2014, 2113
Cfr13I	GGNCC	3 cut(s)	107, 859, 2051
Csp6I	GTAC	8 cut(s)	314, 323, 347, 705, 736, 1076, 1484, 1993
CspCI	CAANNNNNGTGG	2 cut(s)	1767, 1802
CviQI	GTAC	8 cut(s)	314, 323, 347, 705, 736, 1076, 1484, 1993
DpnI	GATC	7 cut(s)	267, 550, 639, 688, 1178, 1549, 2487
DpnII	GATC	7 cut(s)	265, 548, 637, 686, 1176, 1547, 2485
DraI	TTTAAA	1 cut(s)	927
EaeI	YGGCCR	2 cut(s)	1055, 1775
Eam1104I	CTCTTC	1 cut(s)	1896
EarI	CTCTTC	1 cut(s)	1896
Eco130I	CCWWGG	2 cut(s)	682, 2672
Eco32I	GATATC	1 cut(s)	2146
Eco47I	GGWCC	1 cut(s)	2051
Eco57I	CTGAAG	2 cut(s)	895, 2430
Eco88I	CYCGRG	1 cut(s)	758
EcoRI	GAATTC	2 cut(s)	73, 1424
EcoRII	CCWGG	4 cut(s)	202, 405, 1314, 2361
EcoRV	GATATC	1 cut(s)	2146
EcoT14I	CCWWGG	2 cut(s)	682, 2672
EcoT22I	ATGCAT	1 cut(s)	6
ErhI	CCWWGG	2 cut(s)	682, 2672
FalI	AAGNNNNNCTT	8 cut(s)	513, 545, 984, 1016, 1023, 1055, 2012, 2044
FaqI	GGGAC	1 cut(s)	252
FauNDI	CATATG	1 cut(s)	1105
FbaI	TGATCA	1 cut(s)	1176
FblI	GTMKAC	1 cut(s)	360
FokI	GGATG	4 cut(s)	1289, 1412, 1421, 1838
FspBI	CTAG	7 cut(s)	174, 186, 255, 918, 1461, 1538, 2604
GsaI	CCCAGC	1 cut(s)	2482
GsuI	CTGGAG	4 cut(s)	773, 1298, 2040, 2384
HaeIII	GGCC	6 cut(s)	109, 861, 874, 1057, 1777, 2361
HapII	CCGG	4 cut(s)	1054, 1505, 2049, 2275
HincII	GTYRAC	2 cut(s)	588, 1360
HindII	GTYRAC	2 cut(s)	588, 1360
HindIII	AAGCTT	2 cut(s)	625, 1982
HinfI	GANTC	9 cut(s)	66, 244, 442, 574, 1068, 1758, 1888, 2187, 2494
HpaII	CCGG	4 cut(s)	1054, 1505, 2049, 2275
HphI	GGTGA	5 cut(s)	606, 1171, 1172, 1433, 2396
Hpy166II	GTNNAC	9 cut(s)	287, 347, 361, 588, 736, 1360, 1433, 1672, 2404
Hpy8I	GTNNAC	9 cut(s)	287, 347, 361, 588, 736, 1360, 1433, 1672, 2404
HpyAV	CCTTC	8 cut(s)	402, 484, 589, 1338, 1615, 1815, 2071, 2279
HpyCH4III	ACNGT	6 cut(s)	234, 704, 709, 1223, 1353, 2626
HpyCH4IV	ACGT	3 cut(s)	1583, 1657, 2167
HpySE526I	ACGT	3 cut(s)	1583, 1657, 2167
Kpn2I	TCCGGA	1 cut(s)	2274
KpnI	GGTACC	1 cut(s)	317
Ksp22I	TGATCA	1 cut(s)	1176
Kzo9I	GATC	7 cut(s)	265, 548, 637, 686, 1176, 1547, 2485
LguI	GCTCTTC	1 cut(s)	1896
LmnI	GCTCC	2 cut(s)	205, 2549
Lsp1109I	GCAGC	9 cut(s)	39, 490, 1540, 1543, 1612, 1615, 2095, 2238, 2409
LweI	GCATC	2 cut(s)	179, 621
MaeI	CTAG	7 cut(s)	174, 186, 255, 918, 1461, 1538, 2604
MaeII	ACGT	3 cut(s)	1583, 1657, 2167
MaeIII	GTNAC	1 cut(s)	2044
MalI	GATC	7 cut(s)	267, 550, 639, 688, 1178, 1549, 2487
MboI	GATC	7 cut(s)	265, 548, 637, 686, 1176, 1547, 2485
MfeI	CAATTG	4 cut(s)	828, 1172, 1716, 2330
MflI	RGATCY	2 cut(s)	548, 686
MhlI	GDGCHC	2 cut(s)	289, 1873
MlsI	TGGCCA	1 cut(s)	1777
MluNI	TGGCCA	1 cut(s)	1777
MlyI	GAGTC	3 cut(s)	451, 1897, 2181
MmeI	TCCRAC	2 cut(s)	1242, 2490
Mox20I	TGGCCA	1 cut(s)	1777
Mph1103I	ATGCAT	1 cut(s)	6
MroI	TCCGGA	1 cut(s)	2274
MroXI	GAANNNNTTC	4 cut(s)	996, 1115, 1957, 2393
MscI	TGGCCA	1 cut(s)	1777
MseI	TTAA	8 cut(s)	476, 620, 647, 770, 926, 1002, 1661, 1745
MslI	CAYNNNNRTG	1 cut(s)	1139
Msp20I	TGGCCA	1 cut(s)	1777
MspA1I	CMGCKG	2 cut(s)	2251, 2506
MspCI	CTTAAG	2 cut(s)	646, 769
MspI	CCGG	4 cut(s)	1054, 1505, 2049, 2275
MspR9I	CCNGG	4 cut(s)	204, 407, 1316, 2363
MunI	CAATTG	4 cut(s)	828, 1172, 1716, 2330
MvaI	CCWGG	4 cut(s)	204, 407, 1316, 2363
NdeI	CATATG	1 cut(s)	1105
NdeII	GATC	7 cut(s)	265, 548, 637, 686, 1176, 1547, 2485
NheI	GCTAGC	1 cut(s)	917
NlaIV	GGNNCC	3 cut(s)	201, 315, 860
NmeAIII	GCCGAG	2 cut(s)	1911, 2408
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	3 cut(s)	1138, 2327, 2440
NspV	TTCGAA	1 cut(s)	851
PaeI	GCATGC	1 cut(s)	2440
PagI	TCATGA	3 cut(s)	1684, 2014, 2113
PciI	ACATGT	2 cut(s)	1134, 2323
PciSI	GCTCTTC	1 cut(s)	1896
PcsI	WCGNNNNNNNCGW	2 cut(s)	2572, 2581
PdmI	GAANNNNTTC	4 cut(s)	996, 1115, 1957, 2393
PfeI	GAWTC	6 cut(s)	66, 244, 574, 1068, 1758, 2494
PflMI	CCANNNNNTGG	2 cut(s)	370, 796
PfoI	TCCNGGA	1 cut(s)	1314
PleI	GAGTC	3 cut(s)	450, 1896, 2181
PpsI	GAGTC	3 cut(s)	450, 1896, 2181
PscI	ACATGT	2 cut(s)	1134, 2323
PshAI	GACNNNNGTC	2 cut(s)	2022, 2674
PshBI	ATTAAT	1 cut(s)	620
Psp1406I	AACGTT	1 cut(s)	1583
Psp6I	CCWGG	4 cut(s)	202, 405, 1314, 2361
PspFI	CCCAGC	1 cut(s)	2478
PspGI	CCWGG	4 cut(s)	202, 405, 1314, 2361
PspN4I	GGNNCC	3 cut(s)	201, 315, 860
PspPI	GGNCC	3 cut(s)	107, 859, 2051
PstI	CTGCAG	1 cut(s)	1530
PstNI	CAGNNNCTG	2 cut(s)	551, 1238
PsuI	RGATCY	2 cut(s)	548, 686
PvuII	CAGCTG	1 cut(s)	2251
RsaI	GTAC	8 cut(s)	315, 324, 348, 706, 737, 1077, 1485, 1994
RsaNI	GTAC	8 cut(s)	314, 323, 347, 705, 736, 1076, 1484, 1993
RseI	CAYNNNNRTG	1 cut(s)	1139
SapI	GCTCTTC	1 cut(s)	1896
SaqAI	TTAA	8 cut(s)	476, 620, 647, 770, 926, 1002, 1661, 1745
Sau3AI	GATC	7 cut(s)	265, 548, 637, 686, 1176, 1547, 2485
Sau96I	GGNCC	3 cut(s)	107, 859, 2051
ScaI	AGTACT	1 cut(s)	1994
SchI	GAGTC	3 cut(s)	451, 1897, 2181
ScrFI	CCNGG	4 cut(s)	204, 407, 1316, 2363
SduI	GDGCHC	2 cut(s)	289, 1873
SfaNI	GCATC	2 cut(s)	179, 621
SfcI	CTRYAG	3 cut(s)	357, 880, 1526
SfuI	TTCGAA	1 cut(s)	851
SinI	GGWCC	1 cut(s)	2051
SmiMI	CAYNNNNRTG	1 cut(s)	1139
SmlI	CTYRAG	3 cut(s)	280, 646, 769
SmoI	CTYRAG	3 cut(s)	280, 646, 769
SphI	GCATGC	1 cut(s)	2440
SsiI	CCGC	3 cut(s)	295, 539, 2506
SspI	AATATT	1 cut(s)	1270
SspMI	CTAG	7 cut(s)	174, 186, 255, 918, 1461, 1538, 2604
StyD4I	CCNGG	4 cut(s)	202, 405, 1314, 2361
StyI	CCWWGG	2 cut(s)	682, 2672
TaaI	ACNGT	6 cut(s)	234, 704, 709, 1223, 1353, 2626
TaiI	ACGT	3 cut(s)	1586, 1660, 2170
TaqI	TCGA	7 cut(s)	69, 227, 851, 942, 1813, 1891, 2497
TatI	WGTACW	4 cut(s)	346, 735, 1483, 1992
TauI	GCSGC	1 cut(s)	542
TfiI	GAWTC	6 cut(s)	66, 244, 574, 1068, 1758, 2494
Tru1I	TTAA	8 cut(s)	476, 620, 647, 770, 926, 1002, 1661, 1745
Tru9I	TTAA	8 cut(s)	476, 620, 647, 770, 926, 1002, 1661, 1745
TscAI	CASTG	4 cut(s)	85, 647, 919, 957
TseI	GCWGC	9 cut(s)	52, 503, 1528, 1531, 1625, 1628, 2108, 2251, 2422
TspGWI	ACGGA	1 cut(s)	797
TspRI	CASTG	4 cut(s)	85, 647, 919, 957
Van91I	CCANNNNNTGG	2 cut(s)	370, 796
Vha464I	CTTAAG	2 cut(s)	646, 769
VneI	GTGCAC	1 cut(s)	285
VpaK11BI	GGWCC	1 cut(s)	2051
VspI	ATTAAT	1 cut(s)	620
XapI	RAATTY	5 cut(s)	73, 793, 929, 1424, 2068
XbaI	TCTAGA	1 cut(s)	1537
XceI	RCATGY	3 cut(s)	1138, 2327, 2440
XmiI	GTMKAC	1 cut(s)	360
XmnI	GAANNNNTTC	4 cut(s)	996, 1115, 1957, 2393
XspI	CTAG	7 cut(s)	174, 186, 255, 918, 1461, 1538, 2604
ZrmI	AGTACT	1 cut(s)	1994
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.