Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010428.1

Orthogroup ID

OG0005642

Physical Location & Seq

Genomic Coordinates Forward (+)

2723 .. 11250

Gene Structure 8528 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010428.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3234 bp

atgagctcaaggggcattctgcataccatgaatggcaatggtgtctcatctgatgaagtcattgccaagctgcttgaaatgggtttcgagaattccagtgctgtggaggctgtaaaagaagtagggccatcatttgatgatgcgttggagtttatattgaatggttgttgtagaagcaatcagagagcattgagtagttctagatgttctacaagccaggcaaaggctccagggaaaagagatttgccctcctcaaaaccatttggtcaaattcggcagtctagcatactggaccatttccaatcctcgagtggacctaagcggaggaggactcatgtgttacctgatgtacctgtatcagaaatggtgcgtggtcctgtagaacaaggtgtggaacctctttctggtgtggatagcattgaagttttatcagaatcatctctggttgattgccttgacattcgatcagattgggagaagaaagtcagcagtctcttgcaaaagcattttggttttctatcattaaaacctttccagaaggaggtcttagctgcttggttggctcaccaagatacacttgttcttgctgctacaggatctggaaaatctttgtgcttccagattccagcattgttgacagggaaagtggttgttgtgatttcaccattgataagcttgatgcacgatcagtgcttaaagctggcaaaacatggggtttctgcttgctttcttggatctggacaacctgatagtactgtggaaaataaagcaatgagaggcatgtacaacataatatacgtttgccctgagacaatattaagactgataaaaccactccaaaagttagcagaaatacgtgggattgctctttttgcaattgatgaagtgcattgtgtttcaaagtggggccatgattttcggcctgactacaggagattgtctgagttgcgaaagaacttcagtgctagcaatttaaaattcttaaaattcgatataccactgatggcattaactgctaccgccacaattcaggttcgtgaagacattcttaagtcattgtccatgtcaaaggaaacaaaagttgtgcttacttcatttttccggccgaatctaaggttcagggtacagcatagtagaacatcaacatcatcatatgagaatgatttttatgacttgatagacatgtatacgggcaagagaggaaaaggtgaaaagaaacaaatgatcatctcagaagaagtaaacgaagcgctggacagctcatctaacagtagtatgtcagaggctgattgcatttcagagcatgatttggacaatatcgaggatggtaattccgacagacatgatgaagcaatttcactccaggaaaatggttcaagtgcttcaaagggaagggagctgtcagttgactacttggaaaatgatgttgacatctttcagagtgttaatgattgggatgttagctgtggtgaattctgtggactacctctttgtgaggacttgaatactagaaaagaaactacatcggaggtacttgatccgctgagtcaaccagaagaaagactgagacttctgcaacagcccctagagaaaggatcaactatcatatatgttcctacgagaaaacaaacgttgaaaattgcaacttatctttccaagtgtggagtgaaggctgctgcctataatgcagggagacatgttcaattgaagttccccaagctaacagaactcggcctggagtttctgcgatctgaagaggagaaaactttctatgttcaccctgaagctgatatgctgctctcaaaaagcatgcccaaatctttctcaactttctcagagtggggaaaaggctgggctgatcctgagattcgacgccagcggttagagagttttcgacacaacagaagcccacaaagctcttttgatctagacgaagctctgcaaagagatccgggtcatcacttggtgatcaagttaacgtgtgccagcatgggactgaaaatggagttggatagacttagcagtttaccagatgatgttacagaaaagattttggaacgtttgccgcttaaggaggctgtaaggacaagtgttttatccagaaagtggaggtacaaatcggaaatgcttcaaactctattgtttcataataactgtgtttcgactcaaagtcatccaacctacagctttgcgaatattgttgatcatgtactcttactccataaaggtcccatacacaggttcgagctttctttcaatggtaagctagccactagggatatagatcgatggatttttcacctatccagaaaccctgtcgtcgaacagatgatacttgacaattttgaaggggacatctacaacattccgtcatgtttgttttcttttcaagatatcgtttatttagagttatacaggtgtttgctaaaccctccttccacattcaaaggctttggcagcttgaagagccttgatctttggtctgttactttggcccaacatgtgtttgacaacttgattggttgcagtcctgtgcttgagatattgaaattgcaaagatgtgatggtttcaccaatctcaagattgatgcacccaagctctggtttatttacataattggggcctttgaagattttaacctcgtgggttcctcaaatcttgtggatgcttcctttgatttgcagatcattgttgatcaaagagggaattgtactagttttgggaatttgcttaagttttttgatcaccagctgcctcatattcgaaggctcacaataaagaggaactttctaaaatacttgtctattggtgccttgccagagaagctccctaaaccatgccaatatctcaattttctttctttagacatgagctttgacaatccggttgaaatttcaactgtcttatgccttctgagaagctctcctgctctaaaagaactgaaaattttggtggaccctgaaaagaatcacgctgctgtgggagaagtgggatcttgtttatatgacaactacaactgtgcatacactcaactgcggcttgtggaaataaccaagatctctggtgtaaaagctcaactagatttcatagaatctctgcttctaagttcacctgtgcttgagagaatgactgttcaacctgcttctgtcgatggttttttgaagctagtaaaagatttacttctgtttaagcgtaattcaaagcgtgcagagataatggttttggacccataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009378 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032392 GO:0032508 GO:0033554 GO:0034641 GO:0042623 GO:0043138 GO:0043140 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070035 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C RecQ_Zn_bind

Protein Analysis

1077

Amino Acids

121.29

Weight (kDa)

6.41

Isoelectric Point (pI)

47.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005642)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G27680 AT5G27680 AT5G27680 AT5G27680 AT5G27680 AT5G27680
fragaria_vesca	FvH4_6g06440 FvH4_6g06440 FvH4_6g06440 FvH4_6g06440
malus_domestica	MD04G1201600.v1.1
prunus_persica	Prupe.6G321800_v2.0.a1 Prupe.6G321800_v2.0.a1 Prupe.6G321800_v2.0.a1 Prupe.6G321800_v2.0.a1
pyrus_communis	pycom04g17780
rosa_chinensis	RchiOBHm_Chr3g0455521
rosa_laevigata	RLG00000025352
rosa_multiflora	Rmu_sc0005164.1_g000005 Rmu_sc0010428.1_g000001
rosa_roxburghii	Rroxscaffold_6G00423700 Rroxscaffold_6G00424190
rosa_rugosa	Rorug03G0008300
rosa_samantha	Rh3AG067700 Rh3BG070300 Rh3CG068600 Rh3DG070200
rosa_wichuraiana	Rw3G005380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	3148
AccB1I	GGYRCC	1 cut(s)	2810
AccB7I	CCANNNNNTGG	2 cut(s)	2106, 2601
AccI	GTMKAC	1 cut(s)	1187
AciI	CCGC	6 cut(s)	322, 1020, 1541, 1879, 2066, 3037
AclI	AACGTT	2 cut(s)	1631, 2059
AclWI	GGATC	7 cut(s)	604, 742, 1532, 1603, 1853, 1943, 3001
AcoI	YGGCCR	1 cut(s)	1103
AcsI	RAATTY	8 cut(s)	91, 270, 977, 986, 1472, 2725, 2892, 2946
AcuI	CTGAAG	3 cut(s)	943, 1773, 1803
AcyI	GRCGYC	1 cut(s)	1873
AdeI	CACNNNGTG	1 cut(s)	1966
AfaI	GTAC	8 cut(s)	351, 754, 785, 1125, 1533, 2114, 2211, 2713
AfeI	AGCGCT	1 cut(s)	1251
AfiI	CCNNNNNNNGG	6 cut(s)	223, 404, 541, 2106, 2238, 2601
AflII	CTTAAG	3 cut(s)	1049, 2069, 2732
AflIII	ACRYGT	4 cut(s)	1182, 1696, 1979, 2500
AhdI	GACNNNNNGTC	1 cut(s)	2169
AhlI	ACTAGT	1 cut(s)	2714
AjnI	CCWGG	4 cut(s)	216, 229, 1362, 1734
AjuI	GAANNNNNNNTTGG	2 cut(s)	1991, 2023
Alw21I	GWGCWC	1 cut(s)	8
Alw26I	GTCTC	5 cut(s)	49, 497, 803, 1561, 1687
AlwI	GGATC	7 cut(s)	604, 742, 1532, 1603, 1853, 1943, 3001
AlwNI	CAGNNNCTG	2 cut(s)	599, 1286
Ama87I	CYCGRG	1 cut(s)	307
Aor51HI	AGCGCT	1 cut(s)	1251
AoxI	GGCC	7 cut(s)	125, 907, 920, 1103, 1732, 2493, 2622
ApeKI	GCWGC	9 cut(s)	70, 551, 587, 1673, 1676, 1795, 2457, 2752, 2975
ApoI	RAATTY	8 cut(s)	91, 270, 977, 986, 1472, 2725, 2892, 2946
ArsI	GACNNNNNNTTYG	4 cut(s)	1473, 1505, 2858, 2890
Asp700I	GAANNNNTTC	3 cut(s)	1044, 1766, 2127
AspLEI	GCGC	1 cut(s)	1252
AsuC2I	CCSGG	1 cut(s)	1953
AsuII	TTCGAA	1 cut(s)	2764
AsuNHI	GCTAGC	2 cut(s)	965, 2266
AvaI	CYCGRG	1 cut(s)	307
AvaII	GGWCC	6 cut(s)	292, 314, 374, 2228, 2956, 3226
BaeI	ACNNNNGTAYC	2 cut(s)	564, 597
BanI	GGYRCC	1 cut(s)	2810
BanII	GRGCYC	1 cut(s)	8
BauI	CACGAG	1 cut(s)	2642
BbsI	GAAGAC	1 cut(s)	1047
Bbv12I	GWGCWC	1 cut(s)	8
BbvI	GCAGC	9 cut(s)	57, 538, 574, 1660, 1663, 1782, 2469, 2739, 2962
BccI	CCATC	6 cut(s)	136, 997, 1319, 2283, 2558, 3146
BciT130I	CCWGG	4 cut(s)	218, 231, 1364, 1736
BclI	TGATCA	5 cut(s)	1224, 1968, 2203, 2695, 2743
BcnI	CCSGG	1 cut(s)	1953
BcoDI	GTCTC	5 cut(s)	49, 497, 803, 1561, 1687
BcuI	ACTAGT	1 cut(s)	2714
BfmI	CTRYAG	4 cut(s)	378, 591, 928, 2182
BfoI	RGCGCY	1 cut(s)	1253
BfrI	CTTAAG	3 cut(s)	1049, 2069, 2732
BfuAI	ACCTGC	1 cut(s)	3148
BglII	AGATCT	1 cut(s)	3057
BmcAI	AGTACT	1 cut(s)	754
Bme1390I	CCNGG	5 cut(s)	218, 231, 1364, 1736, 1953
Bme18I	GGWCC	6 cut(s)	292, 314, 374, 2228, 2956, 3226
BmeRI	GACNNNNNGTC	1 cut(s)	2169
BmeT110I	CYCGRG	1 cut(s)	307
BmiI	GGNNCC	9 cut(s)	228, 396, 908, 2230, 2623, 2650, 2812, 2958, 3228
BmrFI	CCNGG	5 cut(s)	218, 231, 1364, 1736, 1953
BmsI	GCATC	4 cut(s)	130, 669, 2578, 2656
BmtI	GCTAGC	2 cut(s)	969, 2270
BpiI	GAAGAC	1 cut(s)	1047
BplI	GAGNNNNNCTC	4 cut(s)	316, 348, 2908, 2940
BpmI	CTGGAG	3 cut(s)	213, 1346, 1757
Bpu10I	CCTNAGC	1 cut(s)	318
Bpu14I	TTCGAA	1 cut(s)	2764
BpuEI	CTTGAG	3 cut(s)	2558, 2564, 3140
BpuMI	CCSGG	1 cut(s)	1953
Bsa29I	ATCGAT	1 cut(s)	2287
BsaAI	YACGTR	1 cut(s)	857
BsaBI	GATNNNNATC	1 cut(s)	2283
BsaHI	GRCGYC	1 cut(s)	1873
BsaJI	CCNNGG	1 cut(s)	230
BsaWI	WCCGGW	1 cut(s)	2884
BsaXI	ACNNNNNCTCC	2 cut(s)	2202, 2232
Bsc4I	CCNNNNNNNGG	6 cut(s)	223, 404, 541, 2106, 2238, 2601
Bse1I	ACTGG	2 cut(s)	96, 294
Bse3DI	GCAATG	3 cut(s)	43, 60, 777
Bse8I	GATNNNNATC	1 cut(s)	2283
BseBI	CCWGG	4 cut(s)	218, 231, 1364, 1736
BseCI	ATCGAT	1 cut(s)	2287
BseDI	CCNNGG	1 cut(s)	230
BseGI	GGATG	4 cut(s)	1330, 1462, 2173, 2671
BseJI	GATNNNNATC	1 cut(s)	2283
BseLI	CCNNNNNNNGG	6 cut(s)	223, 404, 541, 2106, 2238, 2601
BseMI	GCAATG	3 cut(s)	43, 60, 777
BseMII	CTCAG	8 cut(s)	798, 933, 1245, 1535, 1556, 1848, 1854, 2906
BseNI	ACTGG	2 cut(s)	96, 294
BseRI	GAGGAG	3 cut(s)	241, 340, 1772
BseX3I	CGGCCG	1 cut(s)	1103
BseXI	GCAGC	9 cut(s)	57, 538, 574, 1660, 1663, 1782, 2469, 2739, 2962
BseYI	CCCAGC	1 cut(s)	1851
BsgI	GTGCAG	1 cut(s)	3228
Bsh1285I	CGRYCG	1 cut(s)	1106
BshFI	GGCC	7 cut(s)	127, 909, 922, 1105, 1734, 2495, 2624
BshNI	GGYRCC	1 cut(s)	2810
BshVI	ATCGAT	1 cut(s)	2287
BsiEI	CGRYCG	1 cut(s)	1106
BsiHKAI	GWGCWC	1 cut(s)	8
BsiHKCI	CYCGRG	1 cut(s)	307
BsiSI	CCGG	3 cut(s)	1102, 1952, 2885
BslFI	GGGAC	3 cut(s)	2007, 2214, 2366
BslI	CCNNNNNNNGG	6 cut(s)	223, 404, 541, 2106, 2238, 2601
BsmAI	GTCTC	5 cut(s)	49, 497, 803, 1561, 1687
BsmFI	GGGAC	3 cut(s)	2007, 2214, 2366
BsmI	GAATGC	1 cut(s)	15
BsnI	GGCC	7 cut(s)	127, 909, 922, 1105, 1734, 2495, 2624
BsoBI	CYCGRG	1 cut(s)	307
Bsp119I	TTCGAA	1 cut(s)	2764
Bsp1286I	GDGCHC	1 cut(s)	8
Bsp1407I	TGTACA	1 cut(s)	783
BspACI	CCGC	6 cut(s)	322, 1020, 1541, 1879, 2066, 3037
BspANI	GGCC	7 cut(s)	127, 909, 922, 1105, 1734, 2495, 2624
BspCNI	CTCAG	8 cut(s)	799, 934, 1244, 1536, 1557, 1847, 1855, 2907
BspDI	ATCGAT	1 cut(s)	2287
BspLI	GGNNCC	9 cut(s)	228, 396, 908, 2230, 2623, 2650, 2812, 2958, 3228
BspMI	ACCTGC	1 cut(s)	3148
BspOI	GCTAGC	2 cut(s)	969, 2270
BspPI	GGATC	7 cut(s)	604, 742, 1532, 1603, 1853, 1943, 3001
BspQI	GCTCTTC	1 cut(s)	2459
BspT104I	TTCGAA	1 cut(s)	2764
BspT107I	GGYRCC	1 cut(s)	2810
BspTI	CTTAAG	3 cut(s)	1049, 2069, 2732
BsrDI	GCAATG	3 cut(s)	43, 60, 777
BsrGI	TGTACA	1 cut(s)	783
BsrI	ACTGG	2 cut(s)	96, 294
BssECI	CCNNGG	1 cut(s)	230
BssNAI	GTATAC	1 cut(s)	1188
BssNI	GRCGYC	1 cut(s)	1873
BssSI	CACGAG	1 cut(s)	2642
Bst1107I	GTATAC	1 cut(s)	1188
Bst2BI	CACGAG	1 cut(s)	2642
Bst2UI	CCWGG	4 cut(s)	218, 231, 1364, 1736
Bst4CI	ACNGT	6 cut(s)	757, 1271, 2156, 2902, 3020, 3133
Bst6I	CTCTTC	2 cut(s)	1749, 2459
BstACI	GRCGYC	1 cut(s)	1873
BstAFI	CTTAAG	3 cut(s)	1049, 2069, 2732
BstAPI	GCANNNNNTGC	1 cut(s)	1013
BstAUI	TGTACA	1 cut(s)	783
BstBAI	YACGTR	1 cut(s)	857
BstBI	TTCGAA	1 cut(s)	2764
BstC8I	GCNNGC	8 cut(s)	702, 724, 967, 1811, 1877, 1987, 2268, 3207
BstF5I	GGATG	4 cut(s)	1330, 1462, 2173, 2671
BstH2I	RGCGCY	1 cut(s)	1253
BstHHI	GCGC	1 cut(s)	1252
BstMAI	GTCTC	5 cut(s)	49, 497, 803, 1561, 1687
BstMCI	CGRYCG	1 cut(s)	1106
BstNI	CCWGG	4 cut(s)	218, 231, 1364, 1736
BstNSI	RCATGY	5 cut(s)	784, 1186, 1700, 1813, 2504
BstSCI	CCNGG	5 cut(s)	216, 229, 1362, 1734, 1951
BstSFI	CTRYAG	4 cut(s)	378, 591, 928, 2182
BstV1I	GCAGC	9 cut(s)	57, 538, 574, 1660, 1663, 1782, 2469, 2739, 2962
BstV2I	GAAGAC	1 cut(s)	1047
BstX2I	RGATCY	5 cut(s)	596, 734, 1948, 2993, 3057
BstXI	CCANNNNNNTGG	2 cut(s)	103, 1370
BstYI	RGATCY	5 cut(s)	596, 734, 1948, 2993, 3057
BstZ17I	GTATAC	1 cut(s)	1188
BstZI	CGGCCG	1 cut(s)	1103
Bsu15I	ATCGAT	1 cut(s)	2287
BsuRI	GGCC	7 cut(s)	127, 909, 922, 1105, 1734, 2495, 2624
BsuTUI	ATCGAT	1 cut(s)	2287
BtsCI	GGATG	4 cut(s)	1330, 1462, 2173, 2671
BtsIMutI	CAGTG	4 cut(s)	103, 695, 967, 998
BveI	ACCTGC	1 cut(s)	3148
Cac8I	GCNNGC	8 cut(s)	702, 724, 967, 1811, 1877, 1987, 2268, 3207
CaiI	CAGNNNCTG	2 cut(s)	599, 1286
CfoI	GCGC	1 cut(s)	1252
ClaI	ATCGAT	1 cut(s)	2287
CseI	GACGC	1 cut(s)	1881
Csp6I	GTAC	8 cut(s)	350, 753, 784, 1124, 1532, 2113, 2210, 2712
CspCI	CAANNNNNGTGG	2 cut(s)	2643, 2678
CviQI	GTAC	8 cut(s)	350, 753, 784, 1124, 1532, 2113, 2210, 2712
DraI	TTTAAA	1 cut(s)	975
DraIII	CACNNNGTG	1 cut(s)	1966
DriI	GACNNNNNGTC	1 cut(s)	2169
EaeI	YGGCCR	1 cut(s)	1103
EagI	CGGCCG	1 cut(s)	1103
Eam1104I	CTCTTC	2 cut(s)	1749, 2459
Eam1105I	GACNNNNNGTC	1 cut(s)	2169
EarI	CTCTTC	2 cut(s)	1749, 2459
Ecl136II	GAGCTC	1 cut(s)	6
EclXI	CGGCCG	1 cut(s)	1103
Eco24I	GRGCYC	1 cut(s)	8
Eco32I	GATATC	1 cut(s)	2395
Eco47I	GGWCC	6 cut(s)	292, 314, 374, 2228, 2956, 3226
Eco47III	AGCGCT	1 cut(s)	1251
Eco52I	CGGCCG	1 cut(s)	1103
Eco53kI	GAGCTC	1 cut(s)	6
Eco57I	CTGAAG	3 cut(s)	943, 1773, 1803
Eco88I	CYCGRG	1 cut(s)	307
EcoICRI	GAGCTC	1 cut(s)	6
EcoO109I	RGGNCCY	2 cut(s)	2228, 2622
EcoRI	GAATTC	2 cut(s)	91, 1472
EcoRII	CCWGG	4 cut(s)	216, 229, 1362, 1734
EcoRV	GATATC	1 cut(s)	2395
EcoT38I	GRGCYC	1 cut(s)	8
FaqI	GGGAC	3 cut(s)	2007, 2214, 2366
FauNDI	CATATG	1 cut(s)	1153
FbaI	TGATCA	5 cut(s)	1224, 1968, 2203, 2695, 2743
FblI	GTMKAC	1 cut(s)	1187
FokI	GGATG	4 cut(s)	1337, 1469, 2160, 2678
FriOI	GRGCYC	1 cut(s)	8
GlaI	GCGC	1 cut(s)	1251
GsaI	CCCAGC	1 cut(s)	1855
GsuI	CTGGAG	3 cut(s)	213, 1346, 1757
HaeII	RGCGCY	1 cut(s)	1253
HaeIII	GGCC	7 cut(s)	127, 909, 922, 1105, 1734, 2495, 2624
HapII	CCGG	3 cut(s)	1102, 1952, 2885
HgaI	GACGC	1 cut(s)	1881
HhaI	GCGC	1 cut(s)	1252
Hin1I	GRCGYC	1 cut(s)	1873
Hin6I	GCGC	1 cut(s)	1250
HinP1I	GCGC	1 cut(s)	1250
HincII	GTYRAC	5 cut(s)	636, 1408, 1429, 1550, 1977
HindII	GTYRAC	5 cut(s)	636, 1408, 1429, 1550, 1977
HindIII	AAGCTT	1 cut(s)	673
HinfI	GANTC	9 cut(s)	331, 434, 622, 1108, 1546, 1867, 2164, 2968, 3092
HpaI	GTTAAC	1 cut(s)	1977
HpaII	CCGG	3 cut(s)	1102, 1952, 2885
Hpy99I	CGWCG	2 cut(s)	1875, 2324
HpyAV	CCTTC	7 cut(s)	532, 1386, 1663, 2342, 2445, 2760, 2921
HpyCH4III	ACNGT	6 cut(s)	757, 1271, 2156, 2902, 3020, 3133
HpyCH4IV	ACGT	5 cut(s)	798, 856, 1631, 1979, 2059
HpySE526I	ACGT	5 cut(s)	798, 856, 1631, 1979, 2059
Hsp92I	GRCGYC	1 cut(s)	1873
HspAI	GCGC	1 cut(s)	1250
Ksp22I	TGATCA	5 cut(s)	1224, 1968, 2203, 2695, 2743
KspAI	GTTAAC	1 cut(s)	1977
LguI	GCTCTTC	1 cut(s)	2459
LmnI	GCTCC	3 cut(s)	232, 1396, 2832
Lsp1109I	GCAGC	9 cut(s)	57, 538, 574, 1660, 1663, 1782, 2469, 2739, 2962
LweI	GCATC	4 cut(s)	130, 669, 2578, 2656
MaeII	ACGT	5 cut(s)	798, 856, 1631, 1979, 2059
MaeIII	GTNAC	3 cut(s)	339, 2038, 2485
MboII	GAAGA	7 cut(s)	490, 1052, 1247, 1568, 1766, 2476, 2642
MfeI	CAATTG	2 cut(s)	876, 1703
MflI	RGATCY	5 cut(s)	596, 734, 1948, 2993, 3057
MhlI	GDGCHC	1 cut(s)	8
MlyI	GAGTC	3 cut(s)	325, 1555, 2158
MmeI	TCCRAC	4 cut(s)	126, 1359, 1989, 2201
MroXI	GAANNNNTTC	3 cut(s)	1044, 1766, 2127
MspA1I	CMGCKG	3 cut(s)	1543, 1879, 2752
MspCI	CTTAAG	3 cut(s)	1049, 2069, 2732
MspI	CCGG	3 cut(s)	1102, 1952, 2885
MspR9I	CCNGG	5 cut(s)	218, 231, 1364, 1736, 1953
MunI	CAATTG	2 cut(s)	876, 1703
Mva1269I	GAATGC	1 cut(s)	15
MvaI	CCWGG	4 cut(s)	218, 231, 1364, 1736
NciI	CCSGG	1 cut(s)	1953
NdeI	CATATG	1 cut(s)	1153
NheI	GCTAGC	2 cut(s)	965, 2266
NlaIV	GGNNCC	9 cut(s)	228, 396, 908, 2230, 2623, 2650, 2812, 2958, 3228
NmeAIII	GCCGAG	1 cut(s)	1710
NspI	RCATGY	5 cut(s)	784, 1186, 1700, 1813, 2504
NspV	TTCGAA	1 cut(s)	2764
PaeI	GCATGC	1 cut(s)	1813
PaeR7I	CTCGAG	1 cut(s)	307
PciI	ACATGT	3 cut(s)	1182, 1696, 2500
PciSI	GCTCTTC	1 cut(s)	2459
PctI	GAATGC	1 cut(s)	15
PdmI	GAANNNNTTC	3 cut(s)	1044, 1766, 2127
PfeI	GAWTC	6 cut(s)	434, 622, 1108, 1867, 2968, 3092
PflMI	CCANNNNNTGG	2 cut(s)	2106, 2601
PfoI	TCCNGGA	1 cut(s)	1362
PleI	GAGTC	3 cut(s)	325, 1554, 2158
PpsI	GAGTC	3 cut(s)	325, 1554, 2158
Ppu21I	YACGTR	1 cut(s)	857
PpuMI	RGGWCCY	1 cut(s)	2228
PscI	ACATGT	3 cut(s)	1182, 1696, 2500
Psp124BI	GAGCTC	1 cut(s)	8
Psp1406I	AACGTT	2 cut(s)	1631, 2059
Psp5II	RGGWCCY	1 cut(s)	2228
Psp6I	CCWGG	4 cut(s)	216, 229, 1362, 1734
PspFI	CCCAGC	1 cut(s)	1851
PspGI	CCWGG	4 cut(s)	216, 229, 1362, 1734
PspN4I	GGNNCC	9 cut(s)	228, 396, 908, 2230, 2623, 2650, 2812, 2958, 3228
PspPPI	RGGWCCY	1 cut(s)	2228
PspXI	VCTCGAGB	1 cut(s)	307
PsrI	GAACNNNNNNTAC	2 cut(s)	2316, 2348
PstNI	CAGNNNCTG	2 cut(s)	599, 1286
PsuI	RGATCY	5 cut(s)	596, 734, 1948, 2993, 3057
PvuII	CAGCTG	1 cut(s)	2752
RsaI	GTAC	8 cut(s)	351, 754, 785, 1125, 1533, 2114, 2211, 2713
RsaNI	GTAC	8 cut(s)	350, 753, 784, 1124, 1532, 2113, 2210, 2712
SacI	GAGCTC	1 cut(s)	8
SapI	GCTCTTC	1 cut(s)	2459
ScaI	AGTACT	1 cut(s)	754
SchI	GAGTC	3 cut(s)	325, 1555, 2158
ScrFI	CCNGG	5 cut(s)	218, 231, 1364, 1736, 1953
SduI	GDGCHC	1 cut(s)	8
SfaNI	GCATC	4 cut(s)	130, 669, 2578, 2656
SfcI	CTRYAG	4 cut(s)	378, 591, 928, 2182
Sfr274I	CTCGAG	1 cut(s)	307
SfuI	TTCGAA	1 cut(s)	2764
SinI	GGWCC	6 cut(s)	292, 314, 374, 2228, 2956, 3226
SlaI	CTCGAG	1 cut(s)	307
SmlI	CTYRAG	8 cut(s)	7, 307, 1049, 2069, 2537, 2579, 2732, 3119
SmoI	CTYRAG	8 cut(s)	7, 307, 1049, 2069, 2537, 2579, 2732, 3119
SpeI	ACTAGT	1 cut(s)	2714
SphI	GCATGC	1 cut(s)	1813
SsiI	CCGC	6 cut(s)	322, 1020, 1541, 1879, 2066, 3037
SspI	AATATT	2 cut(s)	816, 2197
SstI	GAGCTC	1 cut(s)	8
StyD4I	CCNGG	5 cut(s)	216, 229, 1362, 1734, 1951
TaaI	ACNGT	6 cut(s)	757, 1271, 2156, 2902, 3020, 3133
TaiI	ACGT	5 cut(s)	801, 859, 1634, 1982, 2062
TatI	WGTACW	4 cut(s)	752, 783, 2209, 2711
TauI	GCSGC	2 cut(s)	2068, 3040
TfiI	GAWTC	6 cut(s)	434, 622, 1108, 1867, 2968, 3092
TscAI	CASTG	4 cut(s)	103, 695, 967, 1005
TseI	GCWGC	9 cut(s)	70, 551, 587, 1673, 1676, 1795, 2457, 2752, 2975
TspDTI	ATGAA	7 cut(s)	44, 69, 897, 1083, 1362, 2135, 3076
TspGWI	ACGGA	1 cut(s)	2358
TspRI	CASTG	4 cut(s)	103, 695, 967, 1005
Van91I	CCANNNNNTGG	2 cut(s)	2106, 2601
Vha464I	CTTAAG	3 cut(s)	1049, 2069, 2732
VpaK11BI	GGWCC	6 cut(s)	292, 314, 374, 2228, 2956, 3226
XapI	RAATTY	8 cut(s)	91, 270, 977, 986, 1472, 2725, 2892, 2946
XbaI	TCTAGA	2 cut(s)	200, 1927
XceI	RCATGY	5 cut(s)	784, 1186, 1700, 1813, 2504
XcmI	CCANNNNNNNNNTGG	1 cut(s)	308
XhoI	CTCGAG	1 cut(s)	307
XmiI	GTMKAC	1 cut(s)	1187
XmnI	GAANNNNTTC	3 cut(s)	1044, 1766, 2127
ZrmI	AGTACT	1 cut(s)	754

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.