Seed maturation protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G27980 |
| fragaria_vesca | FvH4_6g03840 FvH4_6g03841 |
| malus_domestica | MD04G1217900.v1.1 MD12G1235300.v1.1 |
| prunus_persica | Prupe.6G337900_v2.0.a1 Prupe.6G337900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0452411 |
| rosa_laevigata | RLG00000025605 |
| rosa_multiflora | Rmu_co8111080.1_g000001 Rmu_sc0010928.1_g000016 |
| rosa_roxburghii | Rroxscaffold_6G00429430 Rroxscaffold_6G00429940 |
| rosa_rugosa | Rorug02G0640500 Rorug02G0640600 |
| rosa_samantha | Rh3AG042400 Rh3AG042500 Rh3BG043900 Rh3BG044000 Rh3CG042700 Rh3CG042800 Rh3DG043400 Rh3DG043500 |
| rosa_wichuraiana | Rw3G003250 Rw3G003260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 485 |
| AccBSI | CCGCTC | 1 cut(s) | 557 |
| AclWI | GGATC | 2 cut(s) | 497, 569 |
| AcoI | YGGCCR | 1 cut(s) | 288 |
| AcuI | CTGAAG | 1 cut(s) | 327 |
| AcyI | GRCGYC | 1 cut(s) | 486 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 166, 495, 558 |
| AgeI | ACCGGT | 1 cut(s) | 527 |
| AgsI | TTSAA | 1 cut(s) | 284 |
| AluBI | AGCT | 4 cut(s) | 16, 176, 302, 347 |
| AluI | AGCT | 4 cut(s) | 16, 176, 302, 347 |
| AlwI | GGATC | 2 cut(s) | 497, 569 |
| AoxI | GGCC | 2 cut(s) | 126, 288 |
| ApeKI | GCWGC | 6 cut(s) | 16, 227, 272, 452, 536, 548 |
| AsiGI | ACCGGT | 1 cut(s) | 527 |
| AspLEI | GCGC | 1 cut(s) | 488 |
| AspS9I | GGNCC | 1 cut(s) | 312 |
| AsuC2I | CCSGG | 1 cut(s) | 327 |
| AsuHPI | GGTGA | 1 cut(s) | 146 |
| AsuNHI | GCTAGC | 1 cut(s) | 403 |
| AvaII | GGWCC | 1 cut(s) | 312 |
| BanI | GGYRCC | 1 cut(s) | 485 |
| BbvI | GCAGC | 6 cut(s) | 3, 239, 284, 464, 523, 535 |
| BccI | CCATC | 1 cut(s) | 448 |
| BceAI | ACGGC | 1 cut(s) | 255 |
| BcnI | CCSGG | 1 cut(s) | 327 |
| BfaI | CTAG | 2 cut(s) | 221, 404 |
| BfmI | CTRYAG | 2 cut(s) | 17, 27 |
| BfoI | RGCGCY | 1 cut(s) | 489 |
| Bme1390I | CCNGG | 1 cut(s) | 327 |
| Bme18I | GGWCC | 1 cut(s) | 312 |
| BmgT120I | GGNCC | 1 cut(s) | 312 |
| BmiI | GGNNCC | 2 cut(s) | 199, 487 |
| BmrFI | CCNGG | 1 cut(s) | 327 |
| BmtI | GCTAGC | 1 cut(s) | 407 |
| BpmI | CTGGAG | 1 cut(s) | 441 |
| BpuMI | CCSGG | 1 cut(s) | 327 |
| BsaBI | GATNNNNATC | 1 cut(s) | 507 |
| BsaHI | GRCGYC | 1 cut(s) | 486 |
| BsaJI | CCNNGG | 2 cut(s) | 123, 291 |
| BsaWI | WCCGGW | 2 cut(s) | 131, 527 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 166, 495, 558 |
| Bse118I | RCCGGY | 2 cut(s) | 253, 527 |
| Bse1I | ACTGG | 2 cut(s) | 424, 487 |
| Bse8I | GATNNNNATC | 1 cut(s) | 507 |
| BseDI | CCNNGG | 2 cut(s) | 123, 291 |
| BseJI | GATNNNNATC | 1 cut(s) | 507 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 166, 495, 558 |
| BseNI | ACTGG | 2 cut(s) | 424, 487 |
| BseX3I | CGGCCG | 1 cut(s) | 288 |
| BseXI | GCAGC | 6 cut(s) | 3, 239, 284, 464, 523, 535 |
| Bsh1285I | CGRYCG | 1 cut(s) | 291 |
| BshFI | GGCC | 2 cut(s) | 128, 290 |
| BshNI | GGYRCC | 1 cut(s) | 485 |
| BshTI | ACCGGT | 1 cut(s) | 527 |
| BsiEI | CGRYCG | 1 cut(s) | 291 |
| BsiSI | CCGG | 4 cut(s) | 132, 254, 327, 528 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 166, 495, 558 |
| BsnI | GGCC | 2 cut(s) | 128, 290 |
| Bsp143I | GATC | 2 cut(s) | 502, 561 |
| BspANI | GGCC | 2 cut(s) | 128, 290 |
| BspLI | GGNNCC | 2 cut(s) | 199, 487 |
| BspMAI | CTGCAG | 1 cut(s) | 21 |
| BspOI | GCTAGC | 1 cut(s) | 407 |
| BspPI | GGATC | 2 cut(s) | 497, 569 |
| BspT107I | GGYRCC | 1 cut(s) | 485 |
| BsrBI | CCGCTC | 1 cut(s) | 557 |
| BsrFI | RCCGGY | 2 cut(s) | 253, 527 |
| BsrI | ACTGG | 2 cut(s) | 424, 487 |
| BssAI | RCCGGY | 2 cut(s) | 253, 527 |
| BssECI | CCNNGG | 2 cut(s) | 123, 291 |
| BssMI | GATC | 2 cut(s) | 502, 561 |
| BssNI | GRCGYC | 1 cut(s) | 486 |
| BstACI | GRCGYC | 1 cut(s) | 486 |
| BstC8I | GCNNGC | 1 cut(s) | 405 |
| BstH2I | RGCGCY | 1 cut(s) | 489 |
| BstHHI | GCGC | 1 cut(s) | 488 |
| BstKTI | GATC | 2 cut(s) | 505, 564 |
| BstMBI | GATC | 2 cut(s) | 502, 561 |
| BstMCI | CGRYCG | 1 cut(s) | 291 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 224, 284, 344, 353, 545, 554 |
| BstSCI | CCNGG | 1 cut(s) | 325 |
| BstSFI | CTRYAG | 2 cut(s) | 17, 27 |
| BstV1I | GCAGC | 6 cut(s) | 3, 239, 284, 464, 523, 535 |
| BstZI | CGGCCG | 1 cut(s) | 288 |
| BsuRI | GGCC | 2 cut(s) | 128, 290 |
| BtsIMutI | CAGTG | 1 cut(s) | 417 |
| Cac8I | GCNNGC | 1 cut(s) | 405 |
| CfoI | GCGC | 1 cut(s) | 488 |
| Cfr10I | RCCGGY | 2 cut(s) | 253, 527 |
| Cfr13I | GGNCC | 1 cut(s) | 312 |
| CseI | GACGC | 2 cut(s) | 278, 476 |
| CspAI | ACCGGT | 1 cut(s) | 527 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 513, 548 |
| CviAII | CATG | 1 cut(s) | 322 |
| DinI | GGCGCC | 1 cut(s) | 487 |
| DpnI | GATC | 2 cut(s) | 504, 563 |
| DpnII | GATC | 2 cut(s) | 502, 561 |
| EaeI | YGGCCR | 1 cut(s) | 288 |
| EagI | CGGCCG | 1 cut(s) | 288 |
| EciI | GGCGGA | 3 cut(s) | 110, 158, 325 |
| EclXI | CGGCCG | 1 cut(s) | 288 |
| Eco147I | AGGCCT | 1 cut(s) | 128 |
| Eco47I | GGWCC | 1 cut(s) | 312 |
| Eco52I | CGGCCG | 1 cut(s) | 288 |
| Eco57I | CTGAAG | 1 cut(s) | 327 |
| EgeI | GGCGCC | 1 cut(s) | 487 |
| EheI | GGCGCC | 1 cut(s) | 487 |
| FaeI | CATG | 1 cut(s) | 325 |
| FaiI | YATR | 4 cut(s) | 29, 203, 323, 520 |
| FatI | CATG | 1 cut(s) | 321 |
| FspBI | CTAG | 2 cut(s) | 221, 404 |
| GlaI | GCGC | 1 cut(s) | 487 |
| GsuI | CTGGAG | 1 cut(s) | 441 |
| HaeII | RGCGCY | 1 cut(s) | 489 |
| HaeIII | GGCC | 2 cut(s) | 128, 290 |
| HapII | CCGG | 4 cut(s) | 132, 254, 327, 528 |
| HgaI | GACGC | 2 cut(s) | 278, 476 |
| HhaI | GCGC | 1 cut(s) | 488 |
| Hin1I | GRCGYC | 1 cut(s) | 486 |
| Hin1II | CATG | 1 cut(s) | 325 |
| Hin6I | GCGC | 1 cut(s) | 486 |
| HinP1I | GCGC | 1 cut(s) | 486 |
| HincII | GTYRAC | 1 cut(s) | 157 |
| HindII | GTYRAC | 1 cut(s) | 157 |
| HpaI | GTTAAC | 1 cut(s) | 157 |
| HpaII | CCGG | 4 cut(s) | 132, 254, 327, 528 |
| HphI | GGTGA | 1 cut(s) | 146 |
| Hpy166II | GTNNAC | 2 cut(s) | 137, 157 |
| Hpy188I | TCNGA | 5 cut(s) | 186, 193, 385, 445, 561 |
| Hpy188III | TCNNGA | 1 cut(s) | 221 |
| Hpy8I | GTNNAC | 2 cut(s) | 137, 157 |
| Hpy99I | CGWCG | 1 cut(s) | 413 |
| HpyAV | CCTTC | 1 cut(s) | 188 |
| HpyCH4IV | ACGT | 1 cut(s) | 411 |
| HpyCH4V | TGCA | 1 cut(s) | 19 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 224, 284, 344, 353, 545, 554 |
| HpySE526I | ACGT | 1 cut(s) | 411 |
| Hsp92I | GRCGYC | 1 cut(s) | 486 |
| Hsp92II | CATG | 1 cut(s) | 325 |
| HspAI | GCGC | 1 cut(s) | 486 |
| KasI | GGCGCC | 1 cut(s) | 485 |
| KspAI | GTTAAC | 1 cut(s) | 157 |
| Kzo9I | GATC | 2 cut(s) | 502, 561 |
| LmnI | GCTCC | 1 cut(s) | 422 |
| LpnPI | CCDG | 9 cut(s) | 125, 145, 173, 228, 267, 340, 405, 468, 541 |
| Lsp1109I | GCAGC | 6 cut(s) | 3, 239, 284, 464, 523, 535 |
| MaeI | CTAG | 2 cut(s) | 221, 404 |
| MaeII | ACGT | 1 cut(s) | 411 |
| MaeIII | GTNAC | 2 cut(s) | 266, 478 |
| MalI | GATC | 2 cut(s) | 504, 563 |
| MbiI | CCGCTC | 1 cut(s) | 557 |
| MboI | GATC | 2 cut(s) | 502, 561 |
| MboII | GAAGA | 2 cut(s) | 20, 73 |
| MfeI | CAATTG | 1 cut(s) | 207 |
| MluCI | AATT | 2 cut(s) | 207, 434 |
| Mly113I | GGCGCC | 1 cut(s) | 486 |
| MseI | TTAA | 3 cut(s) | 87, 156, 366 |
| MspA1I | CMGCKG | 2 cut(s) | 16, 230 |
| MspI | CCGG | 4 cut(s) | 132, 254, 327, 528 |
| MspR9I | CCNGG | 1 cut(s) | 327 |
| MunI | CAATTG | 1 cut(s) | 207 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 224, 284, 344, 353, 545, 554 |
| NarI | GGCGCC | 1 cut(s) | 486 |
| NciI | CCSGG | 1 cut(s) | 327 |
| NdeII | GATC | 2 cut(s) | 502, 561 |
| NheI | GCTAGC | 1 cut(s) | 403 |
| NlaIII | CATG | 1 cut(s) | 325 |
| NlaIV | GGNNCC | 2 cut(s) | 199, 487 |
| NmeAIII | GCCGAG | 3 cut(s) | 148, 316, 514 |
| NmuCI | GTSAC | 2 cut(s) | 266, 478 |
| PceI | AGGCCT | 1 cut(s) | 128 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 384 |
| PinAI | ACCGGT | 1 cut(s) | 527 |
| PluTI | GGCGCC | 1 cut(s) | 489 |
| PspN4I | GGNNCC | 2 cut(s) | 199, 487 |
| PspPI | GGNCC | 1 cut(s) | 312 |
| PstI | CTGCAG | 1 cut(s) | 21 |
| PvuII | CAGCTG | 1 cut(s) | 16 |
| SaqAI | TTAA | 3 cut(s) | 87, 156, 366 |
| Sau3AI | GATC | 2 cut(s) | 502, 561 |
| Sau96I | GGNCC | 1 cut(s) | 312 |
| ScrFI | CCNGG | 1 cut(s) | 327 |
| SetI | ASST | 9 cut(s) | 18, 28, 115, 171, 178, 297, 304, 349, 414 |
| SfcI | CTRYAG | 2 cut(s) | 17, 27 |
| SfoI | GGCGCC | 1 cut(s) | 487 |
| SinI | GGWCC | 1 cut(s) | 312 |
| Sse9I | AATT | 2 cut(s) | 207, 434 |
| SseBI | AGGCCT | 1 cut(s) | 128 |
| SspDI | GGCGCC | 1 cut(s) | 485 |
| SspMI | CTAG | 2 cut(s) | 221, 404 |
| StuI | AGGCCT | 1 cut(s) | 128 |
| StyD4I | CCNGG | 1 cut(s) | 325 |
| TaiI | ACGT | 1 cut(s) | 414 |
| TaqI | TCGA | 1 cut(s) | 68 |
| TasI | AATT | 2 cut(s) | 207, 434 |
| TauI | GCSGC | 7 cut(s) | 95, 278, 290, 341, 359, 554, 557 |
| Tru1I | TTAA | 3 cut(s) | 87, 156, 366 |
| Tru9I | TTAA | 3 cut(s) | 87, 156, 366 |
| TscAI | CASTG | 1 cut(s) | 424 |
| TseFI | GTSAC | 2 cut(s) | 266, 478 |
| TseI | GCWGC | 6 cut(s) | 16, 227, 272, 452, 536, 548 |
| Tsp45I | GTSAC | 2 cut(s) | 266, 478 |
| TspGWI | ACGGA | 1 cut(s) | 89 |
| TspRI | CASTG | 1 cut(s) | 424 |
| VpaK11BI | GGWCC | 1 cut(s) | 312 |
| XbaI | TCTAGA | 1 cut(s) | 220 |
| XspI | CTAG | 2 cut(s) | 221, 404 |