Rorug02G0640600

Late embryogenesis abundant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0007178
Physical Location & Seq
Forward (+)
75283670 .. 75286362
2693 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0640600.1

Sequence Viewer

Length: 2244 bp
ATGAGAATAAAACTAGTACTTGTTGTGGTGGTTATATTGTTGGAGCATTATAATCATGGAGCAAAAGCAGCAGCAGACACCAATCCAAATCAACTGGAATTAGTCAAGCCAGGCTGCTCAGCCACCTGTGGATCTCTTGTCGTTCCATATCCTTTTGGTACTACCCCGGGTTGTTACTTTAACGACGACTTTTTCATATCTTGTAATAATACAATTACAGATGGTGGCGGCGGCGGCGGCTATGAAGGAGTTCCAAAAGCTTTTTTCAGAGGGAGAAGTGATTTCGTTATCCTCAACATATCGTTGGAGCGTCAAGAAATGAGAGTATCACGTTCCATGAGCAAATCTTGCCTTGAAGTTGACGAGACTGGCAATGTGACTTCATATTCTAACGAAGACAACAACCCAGGTGTAATTGCCCCCAAAGCCTTTCGTATCTCAAGTAGGCGCAACAAGTTCACCACCGTCGGTTGCAACTTATTCGGGCTTATTCAGACTGTGGATCAAACTATTAGCAGCAGCTCAGGCTCAAAGAAATACTCATCGGAGACATCCGCGCTGCGTGGATATATTGATGCTTGTGTATCAACGTGTACCATAGGAATCGAAAACGTGCAAAATGGAACTTGTCATCCGCATGGTGGCTGTTGCCAAACACCTATTGCAATCGGCGATATAAATCATTATACCACAAGTTTAGACACCATATCAGAAGATTTCCGATCAGTAAAATTATGTGGTTATGCTTTTGTCACAGAAGAAGAGGAGTTCAAGTTTTCCTCTTTAGATCTAATCAAAAGCCTAGATAACAGAAAAGCGGCCCCTTTGGTTCTCGATTGGGCTGTTCGGAATCACATCAATTGTGCAGAAGCTCGGAGTCGTAAGGATTATGCATGCAAGGCAAAGTACAGCGACTGTCTCAATTCAACAAATGGACCTGGCTATATTTGCAAATGCCGCAAAGGTTACCAAGGCAATCCTTACCTCCTCCATGGATGCCAAGATATCAACGAGTGTGCGAGCGAGAAGTTAAATCCTTGCTCAAACTCGGCCACATGCATCAACAACCCTGGAGGTGTCACCTGCACTTGCTCGGAAGGATACATAGGAGACGGAAAGGAAGCCGGAACTGGTTGCACCCATCAATTCAGTCAGCAACTAAAACTTCTTGTTATTGCATTTGGTATTTGCACGGGCATTTTGGTGCTAGTGACAGTAGGTTTTTGGATTTATTTGGTTATAAAGAGGAGAAGACTCATCAAACTCAAACGCATGTTCTTTGAACAAAACGGTGGAGTTTTGTTACAGCAACACCTCAACTTGTCCCGTCATAAACCATCCATTGAGATAATGAAAATATTTAGTTCAGACGAGCTCATAAAGGCTACCAACAATTACGACAAGAGTAACATTCTTGGCCAAGGAGGCAATGGAACAGTTTACAAGGGAGTTCTACGAGGCAACAAAATTGTAGCCATTAAAAGGTCCAAGACTTGTGACCGAAGCCAAATTGGAGAATTCATCAACGAGGGAATTGTGCTTTCCCAAGTCAATCACCGCAATGTGGTTAAACTATTGGGTTGTTGTTTGGAGACAGAAGTTCCAGTGCTTGTTTATGAATTCATCACAAATGGAACTCTTGCAAGCCACCTTCATCCTAATCAAAGTCAGCCGTTGTCAATTACATTGTCATGGCAAATGCGTCTCAAAATCGCAGCTGAAATTGCTGGAGCGCTTGCATACTTGCACTCTGAAACTTGCATGCCAATTATACATAGAGATGTGAAGACTTCTAATATACTGTTAGATGATAATTTCACAGCGAAGGTCGCCGATTTTGGAGCTTCAAGGCTTGTTCCTCTTGGTCAAACTCAATTGACCACTTTATTGCAAGGAACAATTGGATATTTAGATCCAGAATACTTATATAATAGCCAGTTGACAGATAAAAGTGATGTTTTTAGTTTTGGAGTTATTCTAGCGGAGCTACTAACAGGAAAGACGCCATTAATATTCAAAGAGGGTCGAAAAGCAACGGTCAACTTGGCAGTGTACTTTGTTTCTTGCGTGGAAGAGGAATGCTTGCATGAAATTCTCGACGATCAAGTGGCCATGGATGATCAAGTCTTTGAGGTGCTAAAGCAAGTGGCTAGCGTTGCGGTGATGTGTTTAAGGACAAAAAGGGAGGAAAGACCTGCTATGAAGGAAGTTGCAGCAGAGCTAGAAATATTGTCAAAAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SMP

Protein Analysis

747

Amino Acids

82.05

Weight (kDa)

7.15

Isoelectric Point (pI)

40.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 39 - 111 2.9e-07 Wall-associated receptor kinase galacturonan-binding
EGF_CA PF07645 335 - 374 6.5e-07 Calcium-binding EGF domain
EGF_3 PF12947 343 - 373 7.7e-07 EGF domain
EGF PF00008 345 - 371 3.3e-07 EGF-like domain
Pkinase PF00069 466 - 738 4.8e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 470 - 741 3.1e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 51, 1241
AarI CACCTGC 1 cut(s) 1091
Acc36I ACCTGC 2 cut(s) 1091, 2203
AccII CGCG 1 cut(s) 557
AclWI GGATC 3 cut(s) 139, 510, 1907
AcoI YGGCCR 3 cut(s) 1050, 1417, 2109
AcsI RAATTY 3 cut(s) 1517, 1619, 2091
AcyI GRCGYC 1 cut(s) 2003
AfaI GTAC 5 cut(s) 18, 160, 595, 908, 2054
AfeI AGCGCT 1 cut(s) 1734
AfiI CCNNNNNNNGG 3 cut(s) 641, 1482, 1564
AflIII ACRYGT 1 cut(s) 590
AgsI TTSAA 6 cut(s) 356, 772, 927, 1283, 1848, 2017
AhlI ACTAGT 1 cut(s) 13
AjnI CCWGG 4 cut(s) 109, 406, 937, 1069
AloI GAACNNNNNNTCC 2 cut(s) 616, 648
AluBI AGCT 8 cut(s) 260, 522, 872, 1375, 1718, 1844, 1987, 2221
AluI AGCT 8 cut(s) 260, 522, 872, 1375, 1718, 1844, 1987, 2221
Alw21I GWGCWC 1 cut(s) 1377
Alw26I GTCTC 6 cut(s) 359, 542, 923, 1104, 1586, 1709
AlwI GGATC 3 cut(s) 139, 510, 1907
AlwNI CAGNNNCTG 1 cut(s) 915
Ama87I CYCGRG 1 cut(s) 166
Aor51HI AGCGCT 1 cut(s) 1734
AoxI GGCC 4 cut(s) 819, 1050, 1417, 2109
ApeKI GCWGC 8 cut(s) 68, 71, 114, 516, 519, 559, 1715, 2213
ApoI RAATTY 3 cut(s) 1517, 1619, 2091
AseI ATTAAT 1 cut(s) 2009
Asp700I GAANNNNTTC 1 cut(s) 249
AspLEI GCGC 3 cut(s) 450, 559, 1735
AspS9I GGNCC 3 cut(s) 820, 935, 1485
AsuC2I CCSGG 2 cut(s) 167, 168
AsuHPI GGTGA 4 cut(s) 451, 1072, 1547, 2173
AsuNHI GCTAGC 1 cut(s) 2150
AvaI CYCGRG 1 cut(s) 166
AvaII GGWCC 2 cut(s) 935, 1485
BalI TGGCCA 2 cut(s) 1419, 2111
BanII GRGCYC 1 cut(s) 1377
BbsI GAAGAC 3 cut(s) 402, 1258, 1793
Bbv12I GWGCWC 1 cut(s) 1377
BbvI GCAGC 8 cut(s) 80, 83, 101, 528, 531, 546, 1727, 2225
BccI CCATC 3 cut(s) 215, 1149, 1345
BceAI ACGGC 1 cut(s) 1657
BcgI CGANNNNNNTGC 2 cut(s) 463, 497
BciT130I CCWGG 4 cut(s) 111, 408, 939, 1071
BciVI GTATCC 1 cut(s) 1094
BclI TGATCA 1 cut(s) 2119
BcnI CCSGG 2 cut(s) 167, 168
BcoDI GTCTC 6 cut(s) 359, 542, 923, 1104, 1586, 1709
BcuI ACTAGT 1 cut(s) 13
BfaI CTAG 6 cut(s) 14, 803, 1208, 1979, 2151, 2222
BfoI RGCGCY 1 cut(s) 1736
BfuAI ACCTGC 2 cut(s) 1091, 2203
BfuI GTATCC 1 cut(s) 1094
BglI GCCNNNNNGGC 1 cut(s) 1425
BglII AGATCT 1 cut(s) 787
BlpI GCTNAGC 1 cut(s) 118
BmcAI AGTACT 1 cut(s) 18
Bme1390I CCNGG 6 cut(s) 111, 167, 168, 408, 939, 1071
Bme18I GGWCC 2 cut(s) 935, 1485
BmeT110I CYCGRG 1 cut(s) 166
BmgT120I GGNCC 3 cut(s) 820, 935, 1485
BmiI GGNNCC 1 cut(s) 822
BmrFI CCNGG 6 cut(s) 111, 167, 168, 408, 939, 1071
BmsI GCATC 3 cut(s) 565, 986, 1068
BmtI GCTAGC 1 cut(s) 2154
BpiI GAAGAC 3 cut(s) 402, 1258, 1793
BpmI CTGGAG 2 cut(s) 1092, 1749
Bpu10I CCTNAGC 1 cut(s) 523
Bpu1102I GCTNAGC 1 cut(s) 118
BpuEI CTTGAG 1 cut(s) 424
BpuMI CCSGG 2 cut(s) 167, 168
BsaBI GATNNNNATC 1 cut(s) 678
BsaHI GRCGYC 1 cut(s) 2003
BsaJI CCNNGG 8 cut(s) 165, 166, 406, 970, 991, 1069, 1420, 2112
BsaXI ACNNNNNCTCC 2 cut(s) 758, 788
Bsc4I CCNNNNNNNGG 3 cut(s) 641, 1482, 1564
Bse1I ACTGG 5 cut(s) 99, 373, 1135, 1604, 1936
Bse3DI GCAATG 3 cut(s) 379, 1435, 1567
Bse8I GATNNNNATC 1 cut(s) 678
BseBI CCWGG 4 cut(s) 111, 408, 939, 1071
BseDI CCNNGG 8 cut(s) 165, 166, 406, 970, 991, 1069, 1420, 2112
BseGI GGATG 6 cut(s) 551, 631, 1001, 1337, 1654, 2122
BseJI GATNNNNATC 1 cut(s) 678
BseLI CCNNNNNNNGG 3 cut(s) 641, 1482, 1564
BseMI GCAATG 3 cut(s) 379, 1435, 1567
BseMII CTCAG 2 cut(s) 132, 537
BseNI ACTGG 5 cut(s) 99, 373, 1135, 1604, 1936
BseRI GAGGAG 3 cut(s) 779, 977, 1261
BseXI GCAGC 8 cut(s) 80, 83, 101, 528, 531, 546, 1727, 2225
BsgI GTGCAG 2 cut(s) 885, 1069
Bsh1236I CGCG 1 cut(s) 557
BshFI GGCC 4 cut(s) 821, 1052, 1419, 2111
BsiHKAI GWGCWC 1 cut(s) 1377
BsiHKCI CYCGRG 1 cut(s) 166
BsiSI CCGG 2 cut(s) 167, 1125
BslFI GGGAC 1 cut(s) 1309
BslI CCNNNNNNNGG 3 cut(s) 641, 1482, 1564
BsmAI GTCTC 6 cut(s) 359, 542, 923, 1104, 1586, 1709
BsmBI CGTCTC 2 cut(s) 1104, 1709
BsmFI GGGAC 1 cut(s) 1309
BsmI GAATGC 1 cut(s) 2084
BsnI GGCC 4 cut(s) 821, 1052, 1419, 2111
BsoBI CYCGRG 1 cut(s) 166
Bsp1286I GDGCHC 1 cut(s) 1377
Bsp143I GATC 7 cut(s) 131, 502, 722, 787, 1912, 2101, 2119
Bsp1720I GCTNAGC 1 cut(s) 118
Bsp19I CCATGG 2 cut(s) 991, 2112
BspANI GGCC 4 cut(s) 821, 1052, 1419, 2111
BspCNI CTCAG 2 cut(s) 131, 536
BspFNI CGCG 1 cut(s) 557
BspLI GGNNCC 1 cut(s) 822
BspMI ACCTGC 2 cut(s) 1091, 2203
BspOI GCTAGC 1 cut(s) 2154
BspPI GGATC 3 cut(s) 139, 510, 1907
BsrDI GCAATG 3 cut(s) 379, 1435, 1567
BsrI ACTGG 5 cut(s) 99, 373, 1135, 1604, 1936
BssECI CCNNGG 8 cut(s) 165, 166, 406, 970, 991, 1069, 1420, 2112
BssMI GATC 7 cut(s) 131, 502, 722, 787, 1912, 2101, 2119
BssNI GRCGYC 1 cut(s) 2003
BssT1I CCWWGG 4 cut(s) 970, 991, 1420, 2112
Bst2UI CCWGG 4 cut(s) 111, 408, 939, 1071
Bst4CI ACNGT 8 cut(s) 466, 499, 917, 1216, 1292, 1438, 1803, 2038
Bst6I CTCTTC 2 cut(s) 756, 2067
BstACI GRCGYC 1 cut(s) 2003
BstAPI GCANNNNNTGC 1 cut(s) 348
BstC8I GCNNGC 7 cut(s) 895, 1021, 1645, 1737, 1763, 2084, 2152
BstDEI CTNAG 2 cut(s) 118, 523
BstDSI CCRYGG 2 cut(s) 991, 2112
BstEII GGTNACC 1 cut(s) 965
BstF5I GGATG 6 cut(s) 551, 631, 1001, 1337, 1654, 2122
BstFNI CGCG 1 cut(s) 557
BstH2I RGCGCY 1 cut(s) 1736
BstHHI GCGC 3 cut(s) 450, 559, 1735
BstKTI GATC 7 cut(s) 134, 505, 725, 790, 1915, 2104, 2122
BstMAI GTCTC 6 cut(s) 359, 542, 923, 1104, 1586, 1709
BstMBI GATC 7 cut(s) 131, 502, 722, 787, 1912, 2101, 2119
BstNI CCWGG 4 cut(s) 111, 408, 939, 1071
BstNSI RCATGY 4 cut(s) 897, 1059, 1276, 1765
BstPI GGTNACC 1 cut(s) 965
BstSCI CCNGG 6 cut(s) 109, 165, 166, 406, 937, 1069
BstUI CGCG 1 cut(s) 557
BstV1I GCAGC 8 cut(s) 80, 83, 101, 528, 531, 546, 1727, 2225
BstV2I GAAGAC 3 cut(s) 402, 1258, 1793
BstX2I RGATCY 3 cut(s) 131, 787, 1912
BstYI RGATCY 3 cut(s) 131, 787, 1912
BsuI GTATCC 1 cut(s) 1094
BsuRI GGCC 4 cut(s) 821, 1052, 1419, 2111
BtgI CCRYGG 2 cut(s) 991, 2112
BtsCI GGATG 6 cut(s) 551, 631, 1001, 1337, 1654, 2122
BtsI GCAGTG 1 cut(s) 2055
BtsIMutI CAGTG 2 cut(s) 1611, 2055
BveI ACCTGC 2 cut(s) 1091, 2203
Cac8I GCNNGC 7 cut(s) 895, 1021, 1645, 1737, 1763, 2084, 2152
CaiI CAGNNNCTG 1 cut(s) 915
CfoI GCGC 3 cut(s) 450, 559, 1735
Cfr13I GGNCC 3 cut(s) 820, 935, 1485
Cfr9I CCCGGG 1 cut(s) 166
CseI GACGC 3 cut(s) 299, 1691, 2011
Csp6I GTAC 5 cut(s) 17, 159, 594, 907, 2053
CviQI GTAC 5 cut(s) 17, 159, 594, 907, 2053
DdeI CTNAG 2 cut(s) 118, 523
DpnI GATC 7 cut(s) 133, 504, 724, 789, 1914, 2103, 2121
DpnII GATC 7 cut(s) 131, 502, 722, 787, 1912, 2101, 2119
EaeI YGGCCR 3 cut(s) 1050, 1417, 2109
Eam1104I CTCTTC 2 cut(s) 756, 2067
EarI CTCTTC 2 cut(s) 756, 2067
Ecl136II GAGCTC 1 cut(s) 1375
Eco130I CCWWGG 4 cut(s) 970, 991, 1420, 2112
Eco24I GRGCYC 1 cut(s) 1377
Eco32I GATATC 1 cut(s) 1006
Eco47I GGWCC 2 cut(s) 935, 1485
Eco47III AGCGCT 1 cut(s) 1734
Eco53kI GAGCTC 1 cut(s) 1375
Eco88I CYCGRG 1 cut(s) 166
Eco91I GGTNACC 1 cut(s) 965
EcoICRI GAGCTC 1 cut(s) 1375
EcoO65I GGTNACC 1 cut(s) 965
EcoRI GAATTC 2 cut(s) 1517, 1619
EcoRII CCWGG 4 cut(s) 109, 406, 937, 1069
EcoRV GATATC 1 cut(s) 1006
EcoT14I CCWWGG 4 cut(s) 970, 991, 1420, 2112
EcoT22I ATGCAT 2 cut(s) 895, 1061
EcoT38I GRGCYC 1 cut(s) 1377
ErhI CCWWGG 4 cut(s) 970, 991, 1420, 2112
Esp3I CGTCTC 2 cut(s) 1104, 1709
FaqI GGGAC 1 cut(s) 1309
FbaI TGATCA 1 cut(s) 2119
FokI GGATG 6 cut(s) 538, 618, 1008, 1324, 1641, 2129
FriOI GRGCYC 1 cut(s) 1377
FspBI CTAG 6 cut(s) 14, 803, 1208, 1979, 2151, 2222
GlaI GCGC 3 cut(s) 449, 558, 1734
GsuI CTGGAG 2 cut(s) 1092, 1749
HaeII RGCGCY 1 cut(s) 1736
HaeIII GGCC 4 cut(s) 821, 1052, 1419, 2111
HapII CCGG 2 cut(s) 167, 1125
HgaI GACGC 3 cut(s) 299, 1691, 2011
HhaI GCGC 3 cut(s) 450, 559, 1735
Hin1I GRCGYC 1 cut(s) 2003
Hin6I GCGC 3 cut(s) 448, 557, 1733
HinP1I GCGC 3 cut(s) 448, 557, 1733
HincII GTYRAC 3 cut(s) 361, 1941, 2041
HindII GTYRAC 3 cut(s) 361, 1941, 2041
HindIII AAGCTT 1 cut(s) 258
HinfI GANTC 4 cut(s) 603, 850, 877, 1254
HpaII CCGG 2 cut(s) 167, 1125
HphI GGTGA 4 cut(s) 451, 1072, 1547, 2173
Hpy166II GTNNAC 7 cut(s) 361, 459, 594, 1441, 1941, 2041, 2053
Hpy188III TCNNGA 4 cut(s) 314, 833, 1916, 2096
Hpy8I GTNNAC 7 cut(s) 361, 459, 594, 1441, 1941, 2041, 2053
Hpy99I CGWCG 3 cut(s) 188, 470, 2102
HpyAV CCTTC 5 cut(s) 239, 1091, 1661, 1819, 2197
HpyCH4III ACNGT 8 cut(s) 466, 499, 917, 1216, 1292, 1438, 1803, 2038
HpyCH4IV ACGT 3 cut(s) 331, 590, 612
HpyF3I CTNAG 2 cut(s) 118, 523
HpySE526I ACGT 3 cut(s) 331, 590, 612
Hsp92I GRCGYC 1 cut(s) 2003
HspAI GCGC 3 cut(s) 448, 557, 1733
Ksp22I TGATCA 1 cut(s) 2119
Kzo9I GATC 7 cut(s) 131, 502, 722, 787, 1912, 2101, 2119
LmnI GCTCC 6 cut(s) 43, 59, 307, 1730, 1841, 1984
Lsp1109I GCAGC 8 cut(s) 80, 83, 101, 528, 531, 546, 1727, 2225
LweI GCATC 3 cut(s) 565, 986, 1068
MaeI CTAG 6 cut(s) 14, 803, 1208, 1979, 2151, 2222
MaeII ACGT 3 cut(s) 331, 590, 612
MaeIII GTNAC 9 cut(s) 173, 376, 751, 965, 1078, 1210, 1302, 1406, 1496
MalI GATC 7 cut(s) 133, 504, 724, 789, 1914, 2103, 2121
MboI GATC 7 cut(s) 131, 502, 722, 787, 1912, 2101, 2119
MboII GAAGA 7 cut(s) 407, 725, 770, 773, 1263, 1798, 2084
MfeI CAATTG 3 cut(s) 859, 1874, 1899
MflI RGATCY 3 cut(s) 131, 787, 1912
MhlI GDGCHC 1 cut(s) 1377
MlsI TGGCCA 2 cut(s) 1419, 2111
MluNI TGGCCA 2 cut(s) 1419, 2111
MlyI GAGTC 2 cut(s) 886, 1248
MmeI TCCRAC 2 cut(s) 21, 285
Mox20I TGGCCA 2 cut(s) 1419, 2111
Mph1103I ATGCAT 2 cut(s) 895, 1061
MroXI GAANNNNTTC 1 cut(s) 249
MscI TGGCCA 2 cut(s) 1419, 2111
MseI TTAA 6 cut(s) 180, 1031, 1479, 1569, 2009, 2171
MslI CAYNNNNRTG 5 cut(s) 636, 1202, 1560, 1690, 1779
Msp20I TGGCCA 2 cut(s) 1419, 2111
MspA1I CMGCKG 1 cut(s) 1718
MspI CCGG 2 cut(s) 167, 1125
MspR9I CCNGG 6 cut(s) 111, 167, 168, 408, 939, 1071
MunI CAATTG 3 cut(s) 859, 1874, 1899
Mva1269I GAATGC 1 cut(s) 2084
MvaI CCWGG 4 cut(s) 111, 408, 939, 1071
MvnI CGCG 1 cut(s) 557
NciI CCSGG 2 cut(s) 167, 168
NcoI CCATGG 2 cut(s) 991, 2112
NdeII GATC 7 cut(s) 131, 502, 722, 787, 1912, 2101, 2119
NheI GCTAGC 1 cut(s) 2150
NlaIV GGNNCC 1 cut(s) 822
NmeAIII GCCGAG 1 cut(s) 1028
NmuCI GTSAC 5 cut(s) 376, 751, 1078, 1210, 1496
NsiI ATGCAT 2 cut(s) 895, 1061
NspI RCATGY 4 cut(s) 897, 1059, 1276, 1765
PaeI GCATGC 2 cut(s) 897, 1765
PaqCI CACCTGC 1 cut(s) 1091
PctI GAATGC 1 cut(s) 2084
PdmI GAANNNNTTC 1 cut(s) 249
PfeI GAWTC 2 cut(s) 603, 850
PleI GAGTC 2 cut(s) 885, 1248
PpsI GAGTC 2 cut(s) 885, 1248
PshBI ATTAAT 1 cut(s) 2009
PsiI TTATAA 2 cut(s) 51, 1241
Psp124BI GAGCTC 1 cut(s) 1377
Psp6I CCWGG 4 cut(s) 109, 406, 937, 1069
PspEI GGTNACC 1 cut(s) 965
PspGI CCWGG 4 cut(s) 109, 406, 937, 1069
PspN4I GGNNCC 1 cut(s) 822
PspPI GGNCC 3 cut(s) 820, 935, 1485
PstNI CAGNNNCTG 1 cut(s) 915
PsuI RGATCY 3 cut(s) 131, 787, 1912
PvuII CAGCTG 1 cut(s) 1718
RsaI GTAC 5 cut(s) 18, 160, 595, 908, 2054
RsaNI GTAC 5 cut(s) 17, 159, 594, 907, 2053
RseI CAYNNNNRTG 5 cut(s) 636, 1202, 1560, 1690, 1779
SacI GAGCTC 1 cut(s) 1377
SaqAI TTAA 6 cut(s) 180, 1031, 1479, 1569, 2009, 2171
Sau3AI GATC 7 cut(s) 131, 502, 722, 787, 1912, 2101, 2119
Sau96I GGNCC 3 cut(s) 820, 935, 1485
ScaI AGTACT 1 cut(s) 18
SchI GAGTC 2 cut(s) 886, 1248
ScrFI CCNGG 6 cut(s) 111, 167, 168, 408, 939, 1071
SduI GDGCHC 1 cut(s) 1377
SfaNI GCATC 3 cut(s) 565, 986, 1068
SinI GGWCC 2 cut(s) 935, 1485
SmaI CCCGGG 1 cut(s) 168
SmiMI CAYNNNNRTG 5 cut(s) 636, 1202, 1560, 1690, 1779
SmlI CTYRAG 1 cut(s) 439
SmoI CTYRAG 1 cut(s) 439
SpeI ACTAGT 1 cut(s) 13
SphI GCATGC 2 cut(s) 897, 1765
SspI AATATT 3 cut(s) 1359, 2013, 2229
SspMI CTAG 6 cut(s) 14, 803, 1208, 1979, 2151, 2222
SstI GAGCTC 1 cut(s) 1377
StyD4I CCNGG 6 cut(s) 109, 165, 166, 406, 937, 1069
StyI CCWWGG 4 cut(s) 970, 991, 1420, 2112
TaaI ACNGT 8 cut(s) 466, 499, 917, 1216, 1292, 1438, 1803, 2038
TaiI ACGT 3 cut(s) 334, 593, 615
TaqI TCGA 4 cut(s) 606, 834, 2026, 2097
TaqII GACCGA 1 cut(s) 1515
TatI WGTACW 3 cut(s) 16, 906, 2052
TauI GCSGC 6 cut(s) 231, 234, 237, 240, 821, 960
TfiI GAWTC 2 cut(s) 603, 850
Tru1I TTAA 6 cut(s) 180, 1031, 1479, 1569, 2009, 2171
Tru9I TTAA 6 cut(s) 180, 1031, 1479, 1569, 2009, 2171
TscAI CASTG 2 cut(s) 1611, 2055
TseFI GTSAC 5 cut(s) 376, 751, 1078, 1210, 1496
TseI GCWGC 8 cut(s) 68, 71, 114, 516, 519, 559, 1715, 2213
Tsp45I GTSAC 5 cut(s) 376, 751, 1078, 1210, 1496
TspGWI ACGGA 1 cut(s) 1128
TspMI CCCGGG 1 cut(s) 166
TspRI CASTG 2 cut(s) 1611, 2055
VpaK11BI GGWCC 2 cut(s) 935, 1485
VspI ATTAAT 1 cut(s) 2009
XapI RAATTY 3 cut(s) 1517, 1619, 2091
XceI RCATGY 4 cut(s) 897, 1059, 1276, 1765
XcmI CCANNNNNNNNNTGG 1 cut(s) 1427
XmaI CCCGGG 1 cut(s) 166
XmnI GAANNNNTTC 1 cut(s) 249
XspI CTAG 6 cut(s) 14, 803, 1208, 1979, 2151, 2222
ZrmI AGTACT 1 cut(s) 18
Zsp2I ATGCAT 2 cut(s) 895, 1061
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.