Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008391

Physical Location & Seq

Genomic Coordinates Reverse (-)

15008139 .. 15011257

Gene Structure 3119 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G37790.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGGGTTTTTATGAAGGAGCCTCTGTTCATCCAAGAACTCCAGAAAACAAAAACACAGTGAATATTCCGATACTCACTTCTTCTTCTTCATCATCAGATCTTGACGGAGATAACAATGACAACAACAACAATACAGGAATCAAAACCCTTTTGAAAAGAATGATCTTTGATTTGGGTTTCGCTTGTTTCCTTCCTCCTTTAAGCTCAACCGAAAACTCCGGCAACAACAATGGAGGAGGAACAAGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGAGAATAACAAAGCTTGGCTATTGGCGGAAACAGCACCGGAGAATATGAATCCTGATCCTCATTCAGTTCATTCATCGTTTAGATTCAGTCTTTGTTCACAAATCGAGCTTGAGAAAATGAAAGGTGAAGAACCGTCCTTGTCTGCTTCGTCTTCTTGTCGGAATTTGTCGGTTTCTGGTGGTTCCACGACGGTTTTGATGGTTAATTTGGAGAATGGTGTTAAGGAGACTACTGGGAATGCGACTGATGATTTGCGGTGGACTAGAGCTAGGTCGCTTGAGAAGAGTATTTCTCCGGTGGCTAATACTTTGGTTCGGTTTAGCTACGGTGAGATTGTGGCAGCTACTCGTAATTTCTCTAAAGGGAGAGTGTTGGGAAGAGGAGCTTGTAGCTATGTGTTTAGAGGCAAAATCGGAATGTGGAGAACGGCTTTAGCAATCAAGAGACTTGATAAGGAAGACAAAGAATCTCCTAAATCTTTTTGTAGAGAGTTGATGATTGCAAGCTCTCTTCATAGCTCCAACATTGTACCTCTTCTTGGATTCTGTATTGATCCTGAAGAAGGGTTATTCTTGGTTTACAAGTATGTCTCTGGTGGTAGCCTCGAACATTATTTACACGATAAGAAGAAGAAGAAAGGCGTAAAAGCCGCTTTTGGTTTGCCTTGGTCAGCAAGGTACAAGGTAGCGTTAGGTATAGCAGATGCCATAGCTTATTTGCATAATGGAACAGAGCAATGTGTTGTTCACAGAGATATCAAACCCTCCAATATTCTTCTTTCCTCAAAGAAAATACCAAAGTTGTGTGATTTTGGGTTAGCTACTTGGACCGCTGCACCTTCGGTTCCTTTCCTCTGCAAGACCGTGAAAGGCACATTCGGCTATCTGGCTCCTGAGTATTTCCAGCATGGTAAGATATCTGACAAGACCGATGTTTACGCCTTCGGGGTTGTGTTGCTTGAGCTAATAACTGGCCGGAAACCAATCGAAGCAAGAAGAGCATCTGGTCAAGAAAATCTGGTTGTTTGGGCGAAACCGTTGTTGGATAGAGGGATAGAAGCTATAGTGGAGCTGCTTGATCCAAGGCTAAAATGCACAAGAAAAAACTCGGTTCAAATGGAGCGGATGATCCGTGCTGCAGCGGCGTGTGTGATCAATGAGGAGTCCCGAAGACCCGGTATGGAAGAGATTGTCTCAATCTTGAAAGGCGAAGAAGGTGTAGAGCCAGAAACACATTCAAGCAGGAAAACTACAAATATTTCGGGTATGATTGACTCTTATACACAATTGCAACAAACCAAATCCGAGATGAAATGTCATCTTGATCTTGCGATGCTCGGAGTAACCGAGTTTGAAGATGATGATCATGTGTACGGCCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase

Protein Analysis

552

Amino Acids

60.22

Weight (kDa)

8.32

Isoelectric Point (pI)

43.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	212 - 490	1.8e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	214 - 492	9.5e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008391)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66460 AT1G66460 AT1G66460 AT5G37790
fragaria_vesca	FvH4_1g28910 FvH4_1g28910
malus_domestica	MD09G1262600.v1.1 MD17G1257500.v1.1
prunus_persica	Prupe.3G160300_v2.0.a1 Prupe.3G160300_v2.0.a1 Prupe.3G160300_v2.0.a1
pyrus_communis	pycom09g17690 pycom17g25960
rosa_chinensis	RchiOBHm_Chr3g0493411
rosa_laevigata	RLG00000022715
rosa_multiflora	Rmu_sc0000828.1_g000022
rosa_roxburghii	Rroxscaffold_6G00391600
rosa_rugosa	Rorug03G0260900
rosa_samantha	Rh3AG310000 Rh3BG346100 Rh3CG343500 Rh3DG345100
rosa_wichuraiana	Rw3G027230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1399
AciI	CCGC	9 cut(s)	246, 249, 252, 302, 532, 927, 1107, 1399, 1418
AclWI	GGATC	4 cut(s)	326, 824, 1349, 1399
AcoI	YGGCCR	2 cut(s)	1249, 1651
AcsI	RAATTY	1 cut(s)	439
AcuI	CTGAAG	1 cut(s)	855
AfaI	GTAC	3 cut(s)	807, 956, 1649
AfiI	CCNNNNNNNGG	2 cut(s)	815, 839
AgsI	TTSAA	5 cut(s)	154, 1391, 1480, 1515, 1631
AjuI	GAANNNNNNNTTGG	2 cut(s)	1301, 1333
AloI	GAACNNNNNNTCC	2 cut(s)	9, 41
Alw26I	GTCTC	4 cut(s)	497, 715, 871, 1474
AlwI	GGATC	4 cut(s)	326, 824, 1349, 1399
AoxI	GGCC	2 cut(s)	1249, 1651
ApeKI	GCWGC	5 cut(s)	617, 1109, 1348, 1412, 1415
ApoI	RAATTY	1 cut(s)	439
ArsI	GACNNNNNNTTYG	2 cut(s)	511, 543
AspS9I	GGNCC	1 cut(s)	1104
AsuC2I	CCSGG	1 cut(s)	1452
AsuHPI	GGTGA	2 cut(s)	413, 617
AvaII	GGWCC	1 cut(s)	1104
BbsI	GAAGAC	3 cut(s)	420, 741, 1453
BbvI	GCAGC	5 cut(s)	629, 1096, 1335, 1399, 1427
BccI	CCATC	1 cut(s)	469
BceAI	ACGGC	1 cut(s)	720
BclI	TGATCA	2 cut(s)	1428, 1639
BcnI	CCSGG	1 cut(s)	1452
BcoDI	GTCTC	4 cut(s)	497, 715, 871, 1474
BfaI	CTAG	2 cut(s)	540, 546
BfmI	CTRYAG	2 cut(s)	1338, 1413
BglII	AGATCT	1 cut(s)	97
BisI	GCNGC	9 cut(s)	247, 250, 618, 927, 1110, 1349, 1413, 1416, 1419
BlsI	GCNGC	9 cut(s)	248, 251, 619, 928, 1111, 1350, 1414, 1417, 1420
Bme1390I	CCNGG	1 cut(s)	1452
Bme18I	GGWCC	1 cut(s)	1104
BmgT120I	GGNCC	1 cut(s)	1104
BmiI	GGNNCC	4 cut(s)	19, 460, 1122, 1167
BmrFI	CCNGG	1 cut(s)	1452
BmrI	ACTGGG	1 cut(s)	519
BmsI	GCATC	3 cut(s)	970, 1286, 1599
BmuI	ACTGGG	1 cut(s)	519
BpiI	GAAGAC	3 cut(s)	420, 741, 1453
BplI	GAGNNNNNCTC	4 cut(s)	553, 585, 1454, 1486
BpmI	CTGGAG	1 cut(s)	24
BpuEI	CTTGAG	3 cut(s)	407, 575, 1256
BpuMI	CCSGG	1 cut(s)	1452
BsaBI	GATNNNNATC	1 cut(s)	1638
BsaJI	CCNNGG	2 cut(s)	941, 1358
BsaWI	WCCGGW	2 cut(s)	313, 571
BsaXI	ACNNNNNCTCC	2 cut(s)	9, 39
Bsc4I	CCNNNNNNNGG	2 cut(s)	815, 839
Bse1I	ACTGG	2 cut(s)	514, 1252
Bse3DI	GCAATG	1 cut(s)	1019
Bse8I	GATNNNNATC	1 cut(s)	1638
BseDI	CCNNGG	2 cut(s)	941, 1358
BseGI	GGATG	2 cut(s)	28, 1407
BseJI	GATNNNNATC	1 cut(s)	1638
BseLI	CCNNNNNNNGG	2 cut(s)	815, 839
BseMI	GCAATG	1 cut(s)	1019
BseMII	CTCAG	1 cut(s)	1161
BseNI	ACTGG	2 cut(s)	514, 1252
BseX3I	CGGCCG	1 cut(s)	1651
BseXI	GCAGC	5 cut(s)	629, 1096, 1335, 1399, 1427
BsgI	GTGCAG	1 cut(s)	1095
Bsh1285I	CGRYCG	1 cut(s)	1654
BshFI	GGCC	2 cut(s)	1251, 1653
BsiEI	CGRYCG	1 cut(s)	1654
BsiSI	CCGG	5 cut(s)	219, 314, 572, 1252, 1452
BslFI	GGGAC	1 cut(s)	1426
BslI	CCNNNNNNNGG	2 cut(s)	815, 839
BsmAI	GTCTC	4 cut(s)	497, 715, 871, 1474
BsmFI	GGGAC	1 cut(s)	1426
BsmI	GAATGC	1 cut(s)	520
BsnI	GGCC	2 cut(s)	1251, 1653
Bsp143I	GATC	9 cut(s)	97, 162, 331, 829, 1354, 1404, 1428, 1600, 1639
BspACI	CCGC	9 cut(s)	246, 249, 252, 302, 532, 927, 1107, 1399, 1418
BspANI	GGCC	2 cut(s)	1251, 1653
BspCNI	CTCAG	1 cut(s)	1162
BspLI	GGNNCC	4 cut(s)	19, 460, 1122, 1167
BspMAI	CTGCAG	1 cut(s)	1417
BspPI	GGATC	4 cut(s)	326, 824, 1349, 1399
BspQI	GCTCTTC	1 cut(s)	1267
BsrBI	CCGCTC	1 cut(s)	1399
BsrDI	GCAATG	1 cut(s)	1019
BsrI	ACTGG	2 cut(s)	514, 1252
BssECI	CCNNGG	2 cut(s)	941, 1358
BssMI	GATC	9 cut(s)	97, 162, 331, 829, 1354, 1404, 1428, 1600, 1639
BssT1I	CCWWGG	2 cut(s)	941, 1358
Bst4CI	ACNGT	6 cut(s)	58, 411, 469, 605, 1141, 1314
Bst6I	CTCTTC	6 cut(s)	554, 649, 792, 816, 1267, 1455
BstC8I	GCNNGC	1 cut(s)	781
BstDEI	CTNAG	1 cut(s)	1170
BstENI	CCTNNNNNAGG	1 cut(s)	837
BstF5I	GGATG	2 cut(s)	28, 1407
BstKTI	GATC	9 cut(s)	100, 165, 334, 832, 1357, 1407, 1431, 1603, 1642
BstMAI	GTCTC	4 cut(s)	497, 715, 871, 1474
BstMBI	GATC	9 cut(s)	97, 162, 331, 829, 1354, 1404, 1428, 1600, 1639
BstMCI	CGRYCG	1 cut(s)	1654
BstMWI	GCNNNNNNNGC	4 cut(s)	308, 1155, 1274, 1418
BstSCI	CCNGG	1 cut(s)	1450
BstSFI	CTRYAG	2 cut(s)	1338, 1413
BstV1I	GCAGC	5 cut(s)	629, 1096, 1335, 1399, 1427
BstV2I	GAAGAC	3 cut(s)	420, 741, 1453
BstX2I	RGATCY	1 cut(s)	97
BstYI	RGATCY	1 cut(s)	97
BstZI	CGGCCG	1 cut(s)	1651
BsuRI	GGCC	2 cut(s)	1251, 1653
BtgZI	GCGATG	1 cut(s)	1622
BtsCI	GGATG	2 cut(s)	28, 1407
BtsIMutI	CAGTG	1 cut(s)	63
Cac8I	GCNNGC	1 cut(s)	781
Cfr13I	GGNCC	1 cut(s)	1104
Csp6I	GTAC	3 cut(s)	806, 955, 1648
CviAII	CATG	2 cut(s)	1184, 1643
CviQI	GTAC	3 cut(s)	806, 955, 1648
DdeI	CTNAG	1 cut(s)	1170
DpnI	GATC	9 cut(s)	99, 164, 333, 831, 1356, 1406, 1430, 1602, 1641
DpnII	GATC	9 cut(s)	97, 162, 331, 829, 1354, 1404, 1428, 1600, 1639
EaeI	YGGCCR	2 cut(s)	1249, 1651
EagI	CGGCCG	1 cut(s)	1651
Eam1104I	CTCTTC	6 cut(s)	554, 649, 792, 816, 1267, 1455
EarI	CTCTTC	6 cut(s)	554, 649, 792, 816, 1267, 1455
EciI	GGCGGA	2 cut(s)	267, 317
EclXI	CGGCCG	1 cut(s)	1651
Eco130I	CCWWGG	2 cut(s)	941, 1358
Eco32I	GATATC	2 cut(s)	1033, 1194
Eco47I	GGWCC	1 cut(s)	1104
Eco52I	CGGCCG	1 cut(s)	1651
Eco57I	CTGAAG	1 cut(s)	855
EcoNI	CCTNNNNNAGG	1 cut(s)	837
EcoRV	GATATC	2 cut(s)	1033, 1194
EcoT14I	CCWWGG	2 cut(s)	941, 1358
ErhI	CCWWGG	2 cut(s)	941, 1358
FaeI	CATG	2 cut(s)	1187, 1646
FalI	AAGNNNNNCTT	2 cut(s)	646, 678
FaqI	GGGAC	1 cut(s)	1426
FatI	CATG	2 cut(s)	1183, 1642
FbaI	TGATCA	2 cut(s)	1428, 1639
Fnu4HI	GCNGC	9 cut(s)	247, 250, 618, 927, 1110, 1349, 1413, 1416, 1419
FokI	GGATG	2 cut(s)	15, 1414
Fsp4HI	GCNGC	9 cut(s)	247, 250, 618, 927, 1110, 1349, 1413, 1416, 1419
FspBI	CTAG	2 cut(s)	540, 546
GluI	GCNGC	9 cut(s)	247, 250, 618, 927, 1110, 1349, 1413, 1416, 1419
GsuI	CTGGAG	1 cut(s)	24
HaeIII	GGCC	2 cut(s)	1251, 1653
HapII	CCGG	5 cut(s)	219, 314, 572, 1252, 1452
Hin1II	CATG	2 cut(s)	1187, 1646
HindIII	AAGCTT	1 cut(s)	288
HinfI	GANTC	7 cut(s)	138, 325, 360, 743, 819, 1439, 1550
HpaII	CCGG	5 cut(s)	219, 314, 572, 1252, 1452
HphI	GGTGA	2 cut(s)	413, 617
Hpy166II	GTNNAC	6 cut(s)	374, 537, 856, 1024, 1213, 1648
Hpy188I	TCNGA	7 cut(s)	69, 97, 438, 692, 1198, 1582, 1616
Hpy8I	GTNNAC	6 cut(s)	374, 537, 856, 1024, 1213, 1648
Hpy99I	CGWCG	1 cut(s)	469
HpyAV	CCTTC	6 cut(s)	8, 200, 833, 1125, 1228, 1484
HpyCH4III	ACNGT	6 cut(s)	58, 411, 469, 605, 1141, 1314
HpyCH4V	TGCA	7 cut(s)	779, 997, 1112, 1134, 1371, 1415, 1567
HpyF10VI	GCNNNNNNNGC	4 cut(s)	308, 1155, 1274, 1418
HpyF3I	CTNAG	1 cut(s)	1170
Hsp92II	CATG	2 cut(s)	1187, 1646
Ksp22I	TGATCA	2 cut(s)	1428, 1639
Kzo9I	GATC	9 cut(s)	97, 162, 331, 829, 1354, 1404, 1428, 1600, 1639
LguI	GCTCTTC	1 cut(s)	1267
LmnI	GCTCC	6 cut(s)	17, 659, 800, 1171, 1345, 1396
Lsp1109I	GCAGC	5 cut(s)	629, 1096, 1335, 1399, 1427
LweI	GCATC	3 cut(s)	970, 1286, 1599
MaeI	CTAG	2 cut(s)	540, 546
MaeIII	GTNAC	1 cut(s)	1618
MalI	GATC	9 cut(s)	99, 164, 333, 831, 1356, 1406, 1430, 1602, 1641
MbiI	CCGCTC	1 cut(s)	1399
MboI	GATC	9 cut(s)	97, 162, 331, 829, 1354, 1404, 1428, 1600, 1639
MfeI	CAATTG	1 cut(s)	1562
MflI	RGATCY	1 cut(s)	97
MluCI	AATT	4 cut(s)	439, 481, 628, 1562
MlyI	GAGTC	2 cut(s)	1448, 1544
MmeI	TCCRAC	3 cut(s)	416, 822, 1299
MseI	TTAA	3 cut(s)	200, 480, 498
MspA1I	CMGCKG	2 cut(s)	1109, 1418
MspI	CCGG	5 cut(s)	219, 314, 572, 1252, 1452
MspR9I	CCNGG	1 cut(s)	1452
MunI	CAATTG	1 cut(s)	1562
Mva1269I	GAATGC	1 cut(s)	520
MwoI	GCNNNNNNNGC	4 cut(s)	308, 1155, 1274, 1418
NciI	CCSGG	1 cut(s)	1452
NdeII	GATC	9 cut(s)	97, 162, 331, 829, 1354, 1404, 1428, 1600, 1639
NlaIII	CATG	2 cut(s)	1187, 1646
NlaIV	GGNNCC	4 cut(s)	19, 460, 1122, 1167
PciSI	GCTCTTC	1 cut(s)	1267
PcsI	WCGNNNNNNNCGW	1 cut(s)	1620
PctI	GAATGC	1 cut(s)	520
PfeI	GAWTC	5 cut(s)	138, 325, 360, 743, 819
PkrI	GCNGC	9 cut(s)	248, 251, 619, 928, 1111, 1350, 1414, 1417, 1420
PleI	GAGTC	2 cut(s)	1447, 1544
PpsI	GAGTC	2 cut(s)	1447, 1544
PspN4I	GGNNCC	4 cut(s)	19, 460, 1122, 1167
PspPI	GGNCC	1 cut(s)	1104
PsrI	GAACNNNNNNTAC	2 cut(s)	876, 908
PstI	CTGCAG	1 cut(s)	1417
PsuI	RGATCY	1 cut(s)	97
RsaI	GTAC	3 cut(s)	807, 956, 1649
RsaNI	GTAC	3 cut(s)	806, 955, 1648
SapI	GCTCTTC	1 cut(s)	1267
SaqAI	TTAA	3 cut(s)	200, 480, 498
SatI	GCNGC	9 cut(s)	247, 250, 618, 927, 1110, 1349, 1413, 1416, 1419
Sau3AI	GATC	9 cut(s)	97, 162, 331, 829, 1354, 1404, 1428, 1600, 1639
Sau96I	GGNCC	1 cut(s)	1104
SchI	GAGTC	2 cut(s)	1448, 1544
ScrFI	CCNGG	1 cut(s)	1452
SfaNI	GCATC	3 cut(s)	970, 1286, 1599
SfcI	CTRYAG	2 cut(s)	1338, 1413
SinI	GGWCC	1 cut(s)	1104
SmlI	CTYRAG	3 cut(s)	386, 554, 1235
SmoI	CTYRAG	3 cut(s)	386, 554, 1235
Sse9I	AATT	4 cut(s)	439, 481, 628, 1562
SsiI	CCGC	9 cut(s)	246, 249, 252, 302, 532, 927, 1107, 1399, 1418
SspI	AATATT	3 cut(s)	64, 1048, 1534
SspMI	CTAG	2 cut(s)	540, 546
StyD4I	CCNGG	1 cut(s)	1450
StyI	CCWWGG	2 cut(s)	941, 1358
TaaI	ACNGT	6 cut(s)	58, 411, 469, 605, 1141, 1314
TaqI	TCGA	3 cut(s)	381, 882, 1263
TaqII	GACCGA	1 cut(s)	1220
TasI	AATT	4 cut(s)	439, 481, 628, 1562
TauI	GCSGC	4 cut(s)	249, 252, 929, 1421
TfiI	GAWTC	5 cut(s)	138, 325, 360, 743, 819
Tru1I	TTAA	3 cut(s)	200, 480, 498
Tru9I	TTAA	3 cut(s)	200, 480, 498
TscAI	CASTG	1 cut(s)	63
TseI	GCWGC	5 cut(s)	617, 1109, 1348, 1412, 1415
TspDTI	ATGAA	9 cut(s)	17, 27, 78, 335, 338, 339, 410, 779, 1601
TspGWI	ACGGA	2 cut(s)	120, 1397
TspRI	CASTG	1 cut(s)	63
VpaK11BI	GGWCC	1 cut(s)	1104
XagI	CCTNNNNNAGG	1 cut(s)	837
XapI	RAATTY	1 cut(s)	439
XspI	CTAG	2 cut(s)	540, 546

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.