transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G29370 AT5G39240 |
| fragaria_vesca | FvH4_6g47010 |
| malus_domestica | MD09G1064600.v1.1 MD17G1057900.v1.1 |
| prunus_persica | Prupe.3G256400_v2.0.a1 |
| pyrus_communis | pycom111g05430 pycom17g05800 |
| rosa_chinensis | RchiOBHm_Chr2g0166071 |
| rosa_laevigata | RLG00000021582 |
| rosa_multiflora | Rmu_sc0006218.1_g000023 |
| rosa_roxburghii | Rroxscaffold_2G00085230 |
| rosa_rugosa | Rorug02G0520100.1 |
| rosa_samantha | Rh2AG585900 Rh2BG597700 Rh2CG568300 Rh2DG607700 |
| rosa_wichuraiana | Rw2G048850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 146, 239 |
| AclWI | GGATC | 2 cut(s) | 36, 310 |
| AcsI | RAATTY | 1 cut(s) | 71 |
| AcuI | CTGAAG | 1 cut(s) | 104 |
| AflII | CTTAAG | 1 cut(s) | 128 |
| AgsI | TTSAA | 2 cut(s) | 31, 230 |
| AluBI | AGCT | 1 cut(s) | 118 |
| AluI | AGCT | 1 cut(s) | 118 |
| Alw26I | GTCTC | 1 cut(s) | 206 |
| AlwI | GGATC | 2 cut(s) | 36, 310 |
| ApoI | RAATTY | 1 cut(s) | 71 |
| AspLEI | GCGC | 1 cut(s) | 127 |
| BbsI | GAAGAC | 1 cut(s) | 128 |
| BceAI | ACGGC | 1 cut(s) | 133 |
| BclI | TGATCA | 1 cut(s) | 310 |
| BcoDI | GTCTC | 1 cut(s) | 206 |
| BfoI | RGCGCY | 1 cut(s) | 128 |
| BfrI | CTTAAG | 1 cut(s) | 128 |
| BmsI | GCATC | 1 cut(s) | 169 |
| BpiI | GAAGAC | 1 cut(s) | 128 |
| BsaAI | YACGTR | 1 cut(s) | 187 |
| BsaBI | GATNNNNATC | 1 cut(s) | 23 |
| Bse1I | ACTGG | 1 cut(s) | 201 |
| Bse8I | GATNNNNATC | 1 cut(s) | 23 |
| BseJI | GATNNNNATC | 1 cut(s) | 23 |
| BseNI | ACTGG | 1 cut(s) | 201 |
| BseRI | GAGGAG | 2 cut(s) | 63, 111 |
| BslFI | GGGAC | 1 cut(s) | 276 |
| BsmAI | GTCTC | 1 cut(s) | 206 |
| BsmBI | CGTCTC | 1 cut(s) | 206 |
| BsmFI | GGGAC | 1 cut(s) | 276 |
| Bsp143I | GATC | 3 cut(s) | 41, 302, 310 |
| BspACI | CCGC | 2 cut(s) | 146, 239 |
| BspPI | GGATC | 2 cut(s) | 36, 310 |
| BspTI | CTTAAG | 1 cut(s) | 128 |
| BsrI | ACTGG | 1 cut(s) | 201 |
| BssMI | GATC | 3 cut(s) | 41, 302, 310 |
| Bst4CI | ACNGT | 1 cut(s) | 222 |
| BstAFI | CTTAAG | 1 cut(s) | 128 |
| BstBAI | YACGTR | 1 cut(s) | 187 |
| BstDEI | CTNAG | 1 cut(s) | 257 |
| BstH2I | RGCGCY | 1 cut(s) | 128 |
| BstHHI | GCGC | 1 cut(s) | 127 |
| BstKTI | GATC | 3 cut(s) | 44, 305, 313 |
| BstMAI | GTCTC | 1 cut(s) | 206 |
| BstMBI | GATC | 3 cut(s) | 41, 302, 310 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 124 |
| BstV2I | GAAGAC | 1 cut(s) | 128 |
| BstX2I | RGATCY | 1 cut(s) | 41 |
| BstYI | RGATCY | 1 cut(s) | 41 |
| BtsIMutI | CAGTG | 1 cut(s) | 208 |
| CfoI | GCGC | 1 cut(s) | 127 |
| CviJI | RGCY | 1 cut(s) | 118 |
| CviKI_1 | RGCY | 1 cut(s) | 118 |
| DdeI | CTNAG | 1 cut(s) | 257 |
| DpnI | GATC | 3 cut(s) | 43, 304, 312 |
| DpnII | GATC | 3 cut(s) | 41, 302, 310 |
| EciI | GGCGGA | 1 cut(s) | 135 |
| Eco57I | CTGAAG | 1 cut(s) | 104 |
| Esp3I | CGTCTC | 1 cut(s) | 206 |
| FaiI | YATR | 2 cut(s) | 300, 337 |
| FaqI | GGGAC | 1 cut(s) | 276 |
| FbaI | TGATCA | 1 cut(s) | 310 |
| GlaI | GCGC | 1 cut(s) | 126 |
| HaeII | RGCGCY | 1 cut(s) | 128 |
| HhaI | GCGC | 1 cut(s) | 127 |
| Hin6I | GCGC | 1 cut(s) | 125 |
| HinP1I | GCGC | 1 cut(s) | 125 |
| HindIII | AAGCTT | 1 cut(s) | 116 |
| HinfI | GANTC | 4 cut(s) | 24, 133, 169, 197 |
| Hpy188I | TCNGA | 4 cut(s) | 112, 254, 310, 315 |
| Hpy188III | TCNNGA | 6 cut(s) | 16, 28, 45, 176, 230, 292 |
| Hpy99I | CGWCG | 1 cut(s) | 154 |
| HpyAV | CCTTC | 1 cut(s) | 310 |
| HpyCH4III | ACNGT | 1 cut(s) | 222 |
| HpyCH4IV | ACGT | 1 cut(s) | 186 |
| HpyCH4V | TGCA | 1 cut(s) | 280 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 124 |
| HpyF3I | CTNAG | 1 cut(s) | 257 |
| HpySE526I | ACGT | 1 cut(s) | 186 |
| HspAI | GCGC | 1 cut(s) | 125 |
| Ksp22I | TGATCA | 1 cut(s) | 310 |
| Kzo9I | GATC | 3 cut(s) | 41, 302, 310 |
| LmnI | GCTCC | 1 cut(s) | 163 |
| LpnPI | CCDG | 3 cut(s) | 58, 107, 214 |
| LweI | GCATC | 1 cut(s) | 169 |
| MaeII | ACGT | 1 cut(s) | 186 |
| MalI | GATC | 3 cut(s) | 43, 304, 312 |
| MboI | GATC | 3 cut(s) | 41, 302, 310 |
| MflI | RGATCY | 1 cut(s) | 41 |
| MluCI | AATT | 2 cut(s) | 71, 325 |
| MlyI | GAGTC | 2 cut(s) | 142, 178 |
| MmeI | TCCRAC | 1 cut(s) | 187 |
| MnlI | CCTC | 4 cut(s) | 41, 44, 89, 153 |
| MseI | TTAA | 2 cut(s) | 129, 287 |
| MspCI | CTTAAG | 1 cut(s) | 128 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 124 |
| NdeII | GATC | 3 cut(s) | 41, 302, 310 |
| PfeI | GAWTC | 2 cut(s) | 24, 197 |
| PleI | GAGTC | 2 cut(s) | 141, 177 |
| PpsI | GAGTC | 2 cut(s) | 141, 177 |
| Ppu21I | YACGTR | 1 cut(s) | 187 |
| PsuI | RGATCY | 1 cut(s) | 41 |
| SaqAI | TTAA | 2 cut(s) | 129, 287 |
| Sau3AI | GATC | 3 cut(s) | 41, 302, 310 |
| SchI | GAGTC | 2 cut(s) | 142, 178 |
| SetI | ASST | 2 cut(s) | 120, 189 |
| SfaNI | GCATC | 1 cut(s) | 169 |
| SmlI | CTYRAG | 1 cut(s) | 128 |
| SmoI | CTYRAG | 1 cut(s) | 128 |
| Sse9I | AATT | 2 cut(s) | 71, 325 |
| SsiI | CCGC | 2 cut(s) | 146, 239 |
| TaaI | ACNGT | 1 cut(s) | 222 |
| TaiI | ACGT | 1 cut(s) | 189 |
| TaqI | TCGA | 2 cut(s) | 152, 291 |
| TasI | AATT | 2 cut(s) | 71, 325 |
| TfiI | GAWTC | 2 cut(s) | 24, 197 |
| Tru1I | TTAA | 2 cut(s) | 129, 287 |
| Tru9I | TTAA | 2 cut(s) | 129, 287 |
| TscAI | CASTG | 1 cut(s) | 208 |
| TspDTI | ATGAA | 1 cut(s) | 324 |
| TspGWI | ACGGA | 2 cut(s) | 176, 230 |
| TspRI | CASTG | 1 cut(s) | 208 |
| Vha464I | CTTAAG | 1 cut(s) | 128 |
| XapI | RAATTY | 1 cut(s) | 71 |