transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G29370 AT5G39240 |
| fragaria_vesca | FvH4_6g47010 |
| malus_domestica | MD09G1064600.v1.1 MD17G1057900.v1.1 |
| prunus_persica | Prupe.3G256400_v2.0.a1 |
| pyrus_communis | pycom111g05430 pycom17g05800 |
| rosa_chinensis | RchiOBHm_Chr2g0166071 |
| rosa_laevigata | RLG00000021582 |
| rosa_multiflora | Rmu_sc0006218.1_g000023 |
| rosa_roxburghii | Rroxscaffold_2G00085230 |
| rosa_rugosa | Rorug02G0520100.1 |
| rosa_samantha | Rh2AG585900 Rh2BG597700 Rh2CG568300 Rh2DG607700 |
| rosa_wichuraiana | Rw2G048850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 98 |
| AclWI | GGATC | 1 cut(s) | 169 |
| AcuI | CTGAAG | 1 cut(s) | 50 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 94 |
| AjnI | CCWGG | 1 cut(s) | 123 |
| AluBI | AGCT | 3 cut(s) | 19, 74, 154 |
| AluI | AGCT | 3 cut(s) | 19, 74, 154 |
| Alw26I | GTCTC | 3 cut(s) | 13, 17, 136 |
| AlwI | GGATC | 1 cut(s) | 169 |
| ApeKI | GCWGC | 2 cut(s) | 115, 194 |
| BbvI | GCAGC | 2 cut(s) | 102, 181 |
| BccI | CCATC | 1 cut(s) | 55 |
| BceAI | ACGGC | 1 cut(s) | 111 |
| BciT130I | CCWGG | 1 cut(s) | 125 |
| BcoDI | GTCTC | 3 cut(s) | 13, 17, 136 |
| BfaI | CTAG | 1 cut(s) | 165 |
| BisI | GCNGC | 2 cut(s) | 116, 195 |
| BlsI | GCNGC | 2 cut(s) | 117, 196 |
| Bme1390I | CCNGG | 1 cut(s) | 125 |
| BmrFI | CCNGG | 1 cut(s) | 125 |
| BpmI | CTGGAG | 1 cut(s) | 41 |
| BsaI | GGTCTC | 2 cut(s) | 13, 17 |
| BsaJI | CCNNGG | 1 cut(s) | 123 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 94 |
| BseBI | CCWGG | 1 cut(s) | 125 |
| BseDI | CCNNGG | 1 cut(s) | 123 |
| BseGI | GGATG | 1 cut(s) | 47 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 94 |
| BseMII | CTCAG | 1 cut(s) | 24 |
| BseXI | GCAGC | 2 cut(s) | 102, 181 |
| BsiSI | CCGG | 1 cut(s) | 57 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 94 |
| BsmAI | GTCTC | 3 cut(s) | 13, 17, 136 |
| Bso31I | GGTCTC | 2 cut(s) | 13, 17 |
| Bsp143I | GATC | 1 cut(s) | 161 |
| BspACI | CCGC | 1 cut(s) | 98 |
| BspCNI | CTCAG | 1 cut(s) | 23 |
| BspPI | GGATC | 1 cut(s) | 169 |
| BspQI | GCTCTTC | 1 cut(s) | 26 |
| BspTNI | GGTCTC | 2 cut(s) | 13, 17 |
| BssECI | CCNNGG | 1 cut(s) | 123 |
| BssMI | GATC | 1 cut(s) | 161 |
| Bst2UI | CCWGG | 1 cut(s) | 125 |
| Bst4CI | ACNGT | 1 cut(s) | 7 |
| Bst6I | CTCTTC | 1 cut(s) | 26 |
| BstDEI | CTNAG | 1 cut(s) | 10 |
| BstF5I | GGATG | 1 cut(s) | 47 |
| BstKTI | GATC | 1 cut(s) | 164 |
| BstMAI | GTCTC | 3 cut(s) | 13, 17, 136 |
| BstMBI | GATC | 1 cut(s) | 161 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 42, 194 |
| BstNI | CCWGG | 1 cut(s) | 125 |
| BstSCI | CCNGG | 1 cut(s) | 123 |
| BstV1I | GCAGC | 2 cut(s) | 102, 181 |
| BstX2I | RGATCY | 1 cut(s) | 161 |
| BstYI | RGATCY | 1 cut(s) | 161 |
| BtsCI | GGATG | 1 cut(s) | 47 |
| CseI | GACGC | 1 cut(s) | 73 |
| CviJI | RGCY | 5 cut(s) | 19, 36, 45, 74, 154 |
| CviKI_1 | RGCY | 5 cut(s) | 19, 36, 45, 74, 154 |
| DdeI | CTNAG | 1 cut(s) | 10 |
| DpnI | GATC | 1 cut(s) | 163 |
| DpnII | GATC | 1 cut(s) | 161 |
| Eam1104I | CTCTTC | 1 cut(s) | 26 |
| EarI | CTCTTC | 1 cut(s) | 26 |
| EciI | GGCGGA | 1 cut(s) | 113 |
| Eco31I | GGTCTC | 2 cut(s) | 13, 17 |
| Eco57I | CTGAAG | 1 cut(s) | 50 |
| EcoRII | CCWGG | 1 cut(s) | 123 |
| FaiI | YATR | 2 cut(s) | 159, 205 |
| Fnu4HI | GCNGC | 2 cut(s) | 116, 195 |
| FokI | GGATG | 1 cut(s) | 34 |
| Fsp4HI | GCNGC | 2 cut(s) | 116, 195 |
| FspBI | CTAG | 1 cut(s) | 165 |
| GluI | GCNGC | 2 cut(s) | 116, 195 |
| GsuI | CTGGAG | 1 cut(s) | 41 |
| HapII | CCGG | 1 cut(s) | 57 |
| HgaI | GACGC | 1 cut(s) | 73 |
| HinfI | GANTC | 1 cut(s) | 144 |
| HpaII | CCGG | 1 cut(s) | 57 |
| Hpy188III | TCNNGA | 1 cut(s) | 130 |
| HpyCH4III | ACNGT | 1 cut(s) | 7 |
| HpyCH4V | TGCA | 1 cut(s) | 139 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 42, 194 |
| HpyF3I | CTNAG | 1 cut(s) | 10 |
| Kzo9I | GATC | 1 cut(s) | 161 |
| LguI | GCTCTTC | 1 cut(s) | 26 |
| LpnPI | CCDG | 5 cut(s) | 5, 41, 70, 110, 137 |
| Lsp1109I | GCAGC | 2 cut(s) | 102, 181 |
| MaeI | CTAG | 1 cut(s) | 165 |
| MalI | GATC | 1 cut(s) | 163 |
| MboI | GATC | 1 cut(s) | 161 |
| MboII | GAAGA | 1 cut(s) | 43 |
| MflI | RGATCY | 1 cut(s) | 161 |
| MluCI | AATT | 1 cut(s) | 80 |
| MlyI | GAGTC | 1 cut(s) | 138 |
| MnlI | CCTC | 1 cut(s) | 47 |
| MspI | CCGG | 1 cut(s) | 57 |
| MspR9I | CCNGG | 1 cut(s) | 125 |
| MvaI | CCWGG | 1 cut(s) | 125 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 42, 194 |
| NdeII | GATC | 1 cut(s) | 161 |
| PciSI | GCTCTTC | 1 cut(s) | 26 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 11 |
| PkrI | GCNGC | 2 cut(s) | 117, 196 |
| PleI | GAGTC | 1 cut(s) | 138 |
| PpsI | GAGTC | 1 cut(s) | 138 |
| Psp6I | CCWGG | 1 cut(s) | 123 |
| PspGI | CCWGG | 1 cut(s) | 123 |
| PsuI | RGATCY | 1 cut(s) | 161 |
| SapI | GCTCTTC | 1 cut(s) | 26 |
| SatI | GCNGC | 2 cut(s) | 116, 195 |
| Sau3AI | GATC | 1 cut(s) | 161 |
| SchI | GAGTC | 1 cut(s) | 138 |
| ScrFI | CCNGG | 1 cut(s) | 125 |
| SetI | ASST | 4 cut(s) | 21, 76, 129, 156 |
| Sse9I | AATT | 1 cut(s) | 80 |
| SsiI | CCGC | 1 cut(s) | 98 |
| SspI | AATATT | 1 cut(s) | 181 |
| SspMI | CTAG | 1 cut(s) | 165 |
| StyD4I | CCNGG | 1 cut(s) | 123 |
| TaaI | ACNGT | 1 cut(s) | 7 |
| TasI | AATT | 1 cut(s) | 80 |
| TseI | GCWGC | 2 cut(s) | 115, 194 |
| XspI | CTAG | 1 cut(s) | 165 |